Spo14484.1 (mRNA)

Overview
NameSpo14484.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionThylakoid lumenal 15.0 kDa protein
Locationchr5 : 30112329 .. 30115577 (+)
Sequence length905
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAATTTTCGAATAGTGTCTTATCCAAATTAATTTCTCTTCAAAATTGGCTCTCTGGTGATCAAGGTATAACAATGGCGGTCCACCATCTTCCCTGGGCTGTCAATGGCGGAAGACCTACTGAAATAGCTGCTCGAATAACTTGTGCAACAAATGCAACTCCAAAAGTAAAACTGTCCCATTTTAAGAAGTGGGTATCTGAAGTTGGGTCGAAATCTCTCAAACTTGCTCTTTCTAGCTCTCTCGCTATTGCACTTTCTTATAATGGTAAAATTCTGATTCTTGTTTAAATCATGTTGTTTCAGCTTTTCTTTAATTCATCGACATTTCAATTAATTCCCAATATCGCCGTTTTTTACCACCTACCTATAATAACTAGGTACTTGTTTGATTAGTGCACTAATGAACCTTAACAATGTCAGCTTGATTTAATTCGGAGTTATGTTGATATGTTAAGTACAGATTGGTCTCTATAATTTCATATTTTTTTGGTGCATAAAAGATTCTGGTGTTACTGTTGATGTTTGTTGGGCAGTTGGGGTAATTAGATGGGTAGTAGACTGGAACATTGTTTGTCGAGGAAGTATAAACCCGAAACGGTGTGTGGATTGATGACTCTGTAAATACACAATGGAATAACTAGTGTCTTCTAATGTGGATTTCAACTGGCTTAGCTGGTTAGAATCTCAAGGGTAGTACCTAAGAATTCAGATCAAAACCTGTCTGCATCAATTATTCATTTGCTCTTTGTCGCTCTATCTAGCCTATACATCCAAAAAATAGTGTATTTCTAGTGTAGTACTATGATTGTGTTGACGAGTGAGGGATGTTACACTTTTAAGTTTTAACAATGATGGGATAAGCGTCCACCATTCAAAGCTAGCGTATTCAAAGGAAATAATGTCAGGGATATCTCAATGGATTCGCTTGATCGATGACAGGAAATGACAAACTCATCTACCTTTATAACATCATTTTCAGAAAAGGAGAGAAGAGATTACAGCATACATGCAATTAAACAAGTTGCTACTCCATAGATTAACCAAGAGCGCACATGTGTATGCTTGTGTATTTTCATAATTAATAAGCTTAGTTATAAAGAAGTGAAAAGCTGAAGAATAACTTCTTAAACTAGTTTTGACCTTAAAAATTTATAATTAATATTTGATGGAGCAATCTCTGGAGAGCAGGAAAGCACTGTTCTCATGTAATCCTATCATAAGTTCATCTTAAGAGGTTGTTACAGCTTTATGCTTCAAATATCATGTGTAGTTCTCTACAAAAACAAAAATCCTTGCGAGCATAATATTCATGGTGAATACTTTTGTTCTAATGTGACGCAAGATTTGTTGAGTCGAACTTTAACTTTAAAAATAAAGCGTGTAAGGATTGTATCCAGATGTCATGGTAGGAGCGGGCCTTTGGTACTGAGTTTCTTATGATTCTTGTCGCTAATCCCTTTGTTTTCTTTTGTTTGCTCTTCACTATATATGGCTTTTGTAGCTGGTCGCCTTTTCTCTGTATGGTCTATGCCCTATGGGGAGGCTTTCATTAAGTAGATATCATGGTACATGATGCTCTGATGGAGCTCCTCTTCCATTGATTCTCATTTTTGTTGCAAACGGTTTACCAATGATCTACTCTGTGTTTTTTTGTAATCAATTAAGATATCTGCTGGATGCCTTTCTTTGCATAAGCGGGTGATTTATTTCACCTTGCAGGTGTCGAATACGCTGAAGCTAAAACGGGTGTTAATAAGCCGGAACTGCTCCCTAAAGAATACACTACAGTCATCGATGTTGCTGGCTTCCTCTCTTCTGGTCAGGTCAGACTGCCCTTTCCTGTTTACATTCATATATAATACTTCATAGGCTGCTCTTAACAGCTTTACCTACCAAGATATACTTCAAACAAGAATATTGATCTGCTTCAACAGTCAGCTCAGAATTTGTTTTGTATTAGTGAGTCTTAAAGTGAGTATTGTAGTATTGTCTCTCACTCTCATTTATATAGAATATGCTACTCCGTATTCTTAGTAGCTTGTGGTATAGAAAGGTGTCTTATTTGGAAATAATAAGTTCTTCCTAGAAGAGATATACCCATATGGCAATGACAATTTTCCAGGAAAAGAGACTCGCGGAGGAAGTAGCTGATCTTGAGAAGGATACAGGGTTCAAGTTGAGAATCTTAGCACAGAATTACCCTGATACGCCCGGTAGCCACAGCTTACTTTCTTTGTACTTTTATTTTCTTCTCCAAATTACAATTTTGTTTAGAAGTATACCTTTTCAGAATTTGTTTTGGCATATATTTTTTAGAAGATTAAATCTGTGGTCTTCTGACAGGATTGGCAATCAAGGATTATTGGCAAGTAGATGATAGAACAATTGTCTTTGTTGCTGATCCTACTTTTGGTAAATTCTCGTTGTGGAACTGATGTTGGATAAGTCTTGTGCTGGTACATTTAATGATTATTGTACATCTGGTTGATAGGTAATATATTGAATTTTAACGTGGGAGATCAAGTTGATCTTGACATACCGCGTAGTTTCTGGAGCCGTTTGGCTGGGAAATATGGAAATATATTCTACTGGAAAGAAAAGGTGAAAGTTCCTTACATCTCTAAGTGTACCTCTTTATTTATTTTTGCAGCATTCAAGCTTTAATTTCAGTTGGCAGACTATCACATCGTTTTGAAAGTATCTATTTCCCCAACTAGATAGACAAGTAATAGGGGTCGAAATGAGCAAATTACAGTTACACTTGCTATCAATATTATTTCGTTTTGTCAGTTGGCAACTGAATCAGCCTGACTCCTTGTTTGTATCTATCTTTGCCATAGGGAGAAGATGCATCGATTGAAGCTGCTGTTAATGCTATATCTTATTGCTTAAGAGAACCTGTTGGTCCAAGTAATTGCTCCGAGGTAATGTAAATAGAATGTTGTTGGAGACCAAGGAAGATACGGCTCTACTTATTTCTTAAGATAGTAAAATTGTGATTTACTTTTATGGGAGTTAGTATGTTGATATAATTAAGTTACCTTTCCCTGTATTATTAACCTCAAAGGAGAAGTTTGAAGAGAGTATCAAACACGGCGAAGAGCATTTTCATAAAGTGAATGTAATGAACACATTTTGTTCTTTCTTGGTGTGGGTGTTGGTTTGCTTGTCGCTCTTGCTCACATTTTTTTCAAGAAAATCCAAGCATCTGTTTAAGGCGAGAATAGAGAACAGAGTGAAAAGTTGA

mRNA sequence

CGGAATTTTCGAATAGTGTCTTATCCAAATTAATTTCTCTTCAAAATTGGCTCTCTGGTGATCAAGGTATAACAATGGCGGTCCACCATCTTCCCTGGGCTGTCAATGGCGGAAGACCTACTGAAATAGCTGCTCGAATAACTTGTGCAACAAATGCAACTCCAAAAGTAAAACTGTCCCATTTTAAGAAGTGGGTATCTGAAGTTGGGTCGAAATCTCTCAAACTTGCTCTTTCTAGCTCTCTCGCTATTGCACTTTCTTATAATGGTGTCGAATACGCTGAAGCTAAAACGGGTGTTAATAAGCCGGAACTGCTCCCTAAAGAATACACTACAGTCATCGATGTTGCTGGCTTCCTCTCTTCTGGTCAGGAAAAGAGACTCGCGGAGGAAGTAGCTGATCTTGAGAAGGATACAGGGTTCAAGTTGAGAATCTTAGCACAGAATTACCCTGATACGCCCGGATTGGCAATCAAGGATTATTGGCAAGTAGATGATAGAACAATTGTCTTTGTTGCTGATCCTACTTTTGGTAATATATTGAATTTTAACGTGGGAGATCAAGTTGATCTTGACATACCGCGTAGTTTCTGGAGCCGTTTGGCTGGGAAATATGGAAATATATTCTACTGGAAAGAAAAGGGAGAAGATGCATCGATTGAAGCTGCTGTTAATGCTATATCTTATTGCTTAAGAGAACCTGTTGGTCCAAGTAATTGCTCCGAGGAGAAGTTTGAAGAGAGTATCAAACACGGCGAAGAGCATTTTCATAAAGTGAATGTAATGAACACATTTTGTTCTTTCTTGGTGTGGGTGTTGGTTTGCTTGTCGCTCTTGCTCACATTTTTTTCAAGAAAATCCAAGCATCTGTTTAAGGCGAGAATAGAGAACAGAGTGAAAAGTTGA

Coding sequence (CDS)

ATGGCGGTCCACCATCTTCCCTGGGCTGTCAATGGCGGAAGACCTACTGAAATAGCTGCTCGAATAACTTGTGCAACAAATGCAACTCCAAAAGTAAAACTGTCCCATTTTAAGAAGTGGGTATCTGAAGTTGGGTCGAAATCTCTCAAACTTGCTCTTTCTAGCTCTCTCGCTATTGCACTTTCTTATAATGGTGTCGAATACGCTGAAGCTAAAACGGGTGTTAATAAGCCGGAACTGCTCCCTAAAGAATACACTACAGTCATCGATGTTGCTGGCTTCCTCTCTTCTGGTCAGGAAAAGAGACTCGCGGAGGAAGTAGCTGATCTTGAGAAGGATACAGGGTTCAAGTTGAGAATCTTAGCACAGAATTACCCTGATACGCCCGGATTGGCAATCAAGGATTATTGGCAAGTAGATGATAGAACAATTGTCTTTGTTGCTGATCCTACTTTTGGTAATATATTGAATTTTAACGTGGGAGATCAAGTTGATCTTGACATACCGCGTAGTTTCTGGAGCCGTTTGGCTGGGAAATATGGAAATATATTCTACTGGAAAGAAAAGGGAGAAGATGCATCGATTGAAGCTGCTGTTAATGCTATATCTTATTGCTTAAGAGAACCTGTTGGTCCAAGTAATTGCTCCGAGGAGAAGTTTGAAGAGAGTATCAAACACGGCGAAGAGCATTTTCATAAAGTGAATGTAATGAACACATTTTGTTCTTTCTTGGTGTGGGTGTTGGTTTGCTTGTCGCTCTTGCTCACATTTTTTTCAAGAAAATCCAAGCATCTGTTTAAGGCGAGAATAGAGAACAGAGTGAAAAGTTGA

Protein sequence

MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSEEKFEESIKHGEEHFHKVNVMNTFCSFLVWVLVCLSLLLTFFSRKSKHLFKARIENRVKS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14484Spo14484gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14484.1Spo14484.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14484.1.exon.1Spo14484.1.exon.1exon
Spo14484.1.exon.2Spo14484.1.exon.2exon
Spo14484.1.exon.3Spo14484.1.exon.3exon
Spo14484.1.exon.4Spo14484.1.exon.4exon
Spo14484.1.exon.5Spo14484.1.exon.5exon
Spo14484.1.exon.6Spo14484.1.exon.6exon
Spo14484.1.exon.7Spo14484.1.exon.7exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14484.1.utr5p.1Spo14484.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14484.1.CDS.1Spo14484.1.CDS.1CDS
Spo14484.1.CDS.2Spo14484.1.CDS.2CDS
Spo14484.1.CDS.3Spo14484.1.CDS.3CDS
Spo14484.1.CDS.4Spo14484.1.CDS.4CDS
Spo14484.1.CDS.5Spo14484.1.CDS.5CDS
Spo14484.1.CDS.6Spo14484.1.CDS.6CDS
Spo14484.1.CDS.7Spo14484.1.CDS.7CDS


Homology
[Close]
BLAST of Spo14484.1 vs. NCBI nr
Match: gi|902195195|gb|KNA12771.1| (hypothetical protein SOVF_122910 [Spinacia oleracea])

HSP 1 Score: 444.9 bits (1143), Expect = 1.000e-121
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 1 

		  

Query: 1   MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIA 60
           MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSH+KKWVSEVGSKSLKLALSSSLAIA
Sbjct: 1   MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSHYKKWVSEVGSKSLKLALSSSLAIA 60

Query: 61  LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI 120
           LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI
Sbjct: 61  LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI 120

Query: 121 LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY 180
           LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY
Sbjct: 121 LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY 180

Query: 181 GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 218
           GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE
Sbjct: 181 GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 217
[Close]
BLAST of Spo14484.1 vs. NCBI nr
Match: gi|731345692|ref|XP_010684052.1| (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 364.4 bits (934), Expect = 1.800e-97
Identity = 182/222 (81.98%), Postives = 198/222 (89.19%), Query Frame = 1 

		  

Query: 1   MAVHHLPWAVNGGR--PTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLA 60
           MAV HLPW V+  R  P+ IAA+IT A          HF+ WVS+VGS S+KLALS+SLA
Sbjct: 1   MAVCHLPWVVHATRLRPSSIAAKITPAI---------HFRNWVSQVGSNSVKLALSTSLA 60

Query: 61  IALSYNGVEYAEA-KTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFK 120
           +ALS+ GVE+AEA K GVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEE+A+LE+DTGFK
Sbjct: 61  LALSFTGVEHAEAAKMGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEIAELERDTGFK 120

Query: 121 LRILAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA 180
           LRILAQNYPDTPGLAIKD+WQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA
Sbjct: 121 LRILAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA 180

Query: 181 GKYGNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSEEK 220
           GKYGNIFYWKEKGEDASIEAAVNAI+YCL+EPVGPSNCSE K
Sbjct: 181 GKYGNIFYWKEKGEDASIEAAVNAITYCLKEPVGPSNCSEVK 213
[Close]
BLAST of Spo14484.1 vs. NCBI nr
Match: gi|719993769|ref|XP_010253980.1| (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 318.5 bits (815), Expect = 1.100e-83
Identity = 157/206 (76.21%), Postives = 174/206 (84.47%), Query Frame = 1 

		  

Query: 14  RPTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKT 73
           RP  I++ ++  TNA         KKWV++  SKSL  ALS +LA+ALS  GV   EAK 
Sbjct: 25  RPMTISSSLSSPTNAPA------LKKWVADFHSKSLNFALSGALALALSLTGVGSVEAKV 84

Query: 74  GVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAI 133
           GVNKPELLPKE++ VIDVAGFLS+GQEKRL +E+ADLE+DTGFKLRILAQNYPDTPGLAI
Sbjct: 85  GVNKPELLPKEFSPVIDVAGFLSAGQEKRLTQEIADLERDTGFKLRILAQNYPDTPGLAI 144

Query: 134 KDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDA 193
           +D+WQVDDRTIVFVADPTFGNILNFNVG  VDLDIPRSFWSRLAGKYGN+FYWKEKGEDA
Sbjct: 145 RDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDA 204

Query: 194 SIEAAVNAISYCLREPVGPSNCSEEK 220
           SIEAAV AIS CLREPVGPSNCSE K
Sbjct: 205 SIEAAVMAISNCLREPVGPSNCSEVK 224
[Close]
BLAST of Spo14484.1 vs. NCBI nr
Match: gi|1021034032|gb|KZM91816.1| (hypothetical protein DCAR_020819 [Daucus carota subsp. sativus])

HSP 1 Score: 316.2 bits (809), Expect = 5.500e-83
Identity = 150/189 (79.37%), Postives = 166/189 (87.83%), Query Frame = 1 

		  

Query: 29  TPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELLPKEYTTV 88
           T +   SHF +W +   SKSL  ALS++LAI+LS +G+ YAEAK GVNKPELLPK +T V
Sbjct: 38  TTQQNSSHFTRWAAAFPSKSLSFALSATLAISLSLSGIGYAEAKVGVNKPELLPKNFTPV 97

Query: 89  IDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDDRTIVFVA 148
           IDVAGFLS GQE R+A+E+  +EKDTGFKLR+LAQNYPDTPGLAIKDYWQVDDRTIVFVA
Sbjct: 98  IDVAGFLSEGQENRIAQEITAIEKDTGFKLRVLAQNYPDTPGLAIKDYWQVDDRTIVFVA 157

Query: 149 DPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNAISYCLRE 208
           DPTFGNILNFNVGD VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIEAAV AIS CLRE
Sbjct: 158 DPTFGNILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISNCLRE 217

Query: 209 PVGPSNCSE 218
           PVGP+NCSE
Sbjct: 218 PVGPNNCSE 226
[Close]
BLAST of Spo14484.1 vs. NCBI nr
Match: gi|1000965807|ref|XP_015574837.1| (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Ricinus communis])

HSP 1 Score: 316.2 bits (809), Expect = 5.500e-83
Identity = 150/198 (75.76%), Postives = 170/198 (85.86%), Query Frame = 1 

		  

Query: 22  ITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELL 81
           +T ++   P    + F  WV +  SK+LK  LS +L + LS +GVE+AEAK GVNKPELL
Sbjct: 25  VTASSPIFPIQNSTKFSNWVVDFRSKTLKFLLSGALTLGLSLSGVEFAEAKVGVNKPELL 84

Query: 82  PKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDD 141
           PKE+TTVIDVAGFLS GQEKRLA+E+ D+EKDTGFKLR+LAQNYPDTPGLAIKD+W+VDD
Sbjct: 85  PKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQNYPDTPGLAIKDFWRVDD 144

Query: 142 RTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNA 201
           RTIVFVADPTFGNILNFNVG  +DLDIPRSFWSRLAGKYGNIFYWKEKGEDASIE+AV A
Sbjct: 145 RTIVFVADPTFGNILNFNVGASIDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMA 204

Query: 202 ISYCLREPVGPSNCSEEK 220
           IS CLREPVGP+NCSE K
Sbjct: 205 ISNCLREPVGPNNCSEVK 222
[Close]
BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZT4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122910 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 7.200e-122
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 1 

		  

Query: 1   MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIA 60
           MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSH+KKWVSEVGSKSLKLALSSSLAIA
Sbjct: 1   MAVHHLPWAVNGGRPTEIAARITCATNATPKVKLSHYKKWVSEVGSKSLKLALSSSLAIA 60

Query: 61  LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI 120
           LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI
Sbjct: 61  LSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRI 120

Query: 121 LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY 180
           LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY
Sbjct: 121 LAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKY 180

Query: 181 GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 218
           GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE
Sbjct: 181 GNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 217
[Close]
BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYB6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161650 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.200e-97
Identity = 182/222 (81.98%), Postives = 198/222 (89.19%), Query Frame = 1 

		  

Query: 1   MAVHHLPWAVNGGR--PTEIAARITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLA 60
           MAV HLPW V+  R  P+ IAA+IT A          HF+ WVS+VGS S+KLALS+SLA
Sbjct: 1   MAVCHLPWVVHATRLRPSSIAAKITPAI---------HFRNWVSQVGSNSVKLALSTSLA 60

Query: 61  IALSYNGVEYAEA-KTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFK 120
           +ALS+ GVE+AEA K GVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEE+A+LE+DTGFK
Sbjct: 61  LALSFTGVEHAEAAKMGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEIAELERDTGFK 120

Query: 121 LRILAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA 180
           LRILAQNYPDTPGLAIKD+WQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA
Sbjct: 121 LRILAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLA 180

Query: 181 GKYGNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSEEK 220
           GKYGNIFYWKEKGEDASIEAAVNAI+YCL+EPVGPSNCSE K
Sbjct: 181 GKYGNIFYWKEKGEDASIEAAVNAITYCLKEPVGPSNCSEVK 213
[Close]
BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Match: A0A164WIG1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020819 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.900e-83
Identity = 150/189 (79.37%), Postives = 166/189 (87.83%), Query Frame = 1 

		  

Query: 29  TPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELLPKEYTTV 88
           T +   SHF +W +   SKSL  ALS++LAI+LS +G+ YAEAK GVNKPELLPK +T V
Sbjct: 38  TTQQNSSHFTRWAAAFPSKSLSFALSATLAISLSLSGIGYAEAKVGVNKPELLPKNFTPV 97

Query: 89  IDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDDRTIVFVA 148
           IDVAGFLS GQE R+A+E+  +EKDTGFKLR+LAQNYPDTPGLAIKDYWQVDDRTIVFVA
Sbjct: 98  IDVAGFLSEGQENRIAQEITAIEKDTGFKLRVLAQNYPDTPGLAIKDYWQVDDRTIVFVA 157

Query: 149 DPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNAISYCLRE 208
           DPTFGNILNFNVGD VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIEAAV AIS CLRE
Sbjct: 158 DPTFGNILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISNCLRE 217

Query: 209 PVGPSNCSE 218
           PVGP+NCSE
Sbjct: 218 PVGPNNCSE 226
[Close]
BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Match: B9S0H8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1355040 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.600e-83
Identity = 149/196 (76.02%), Postives = 169/196 (86.22%), Query Frame = 1 

		  

Query: 22  ITCATNATPKVKLSHFKKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELL 81
           +T ++   P    + F  WV +  SK+LK  LS +L + LS +GVE+AEAK GVNKPELL
Sbjct: 25  VTASSPIFPIQNSTKFSNWVVDFRSKTLKFLLSGALTLGLSLSGVEFAEAKVGVNKPELL 84

Query: 82  PKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDD 141
           PKE+TTVIDVAGFLS GQEKRLA+E+ D+EKDTGFKLR+LAQNYPDTPGLAIKD+W+VDD
Sbjct: 85  PKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQNYPDTPGLAIKDFWRVDD 144

Query: 142 RTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNA 201
           RTIVFVADPTFGNILNFNVG  +DLDIPRSFWSRLAGKYGNIFYWKEKGEDASIE+AV A
Sbjct: 145 RTIVFVADPTFGNILNFNVGASIDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMA 204

Query: 202 ISYCLREPVGPSNCSE 218
           IS CLREPVGP+NCSE
Sbjct: 205 ISNCLREPVGPNNCSE 220
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BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Match: A9PJV2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.600e-83
Identity = 155/214 (72.43%), Postives = 175/214 (81.78%), Query Frame = 1 

		  

Query: 15  PTEIAARITCATNATP-KVKLSH--------FKKWVSEVGSKSLKLALSSSLAIALSYNG 74
           P+ +A + TC +  TP  + +S         F KWV +  SKSL  A S +LA+ LS  G
Sbjct: 7   PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTKWVLDFRSKSLNFAFSGALALGLSLPG 66

Query: 75  VEYAEAKTGVNKPELLPKEYTTVIDVAGFLSSGQEKRLAEEVADLEKDTGFKLRILAQNY 134
           V  A+AK GVNKPELLPKE+TTVIDVAGFLS GQEKRLAEE++D+EKDTGFKLR+LAQNY
Sbjct: 67  VGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNY 126

Query: 135 PDTPGLAIKDYWQVDDRTIVFVADPTFGNILNFNVGDQVDLDIPRSFWSRLAGKYGNIFY 194
           PDTPGLAI+D+WQVDDRT+VFVADP FGNILNFNVG  VDLDIPRSFWSRLAGKYGN+FY
Sbjct: 127 PDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLAGKYGNMFY 186

Query: 195 WKEKGEDASIEAAVNAISYCLREPVGPSNCSEEK 220
           WKEKGEDASIEAAV AIS CLREPVGP+NCSE K
Sbjct: 187 WKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220
[Close]
BLAST of Spo14484.1 vs. ExPASy Swiss-Prot
Match: TL15B_ARATH (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana GN=At5g52970 PE=1 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-79
Identity = 142/180 (78.89%), Postives = 160/180 (88.89%), Query Frame = 1 

		  

Query: 38  KKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSS 97
           + WVS   SKSL L  S +LA+ LS +GV +A+AK GVNKPELLPKE+T+VIDVA FLS+
Sbjct: 42  ENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSN 101

Query: 98  GQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILN 157
           GQEKR+A+E+A+LEKDTGFKLR+LAQNYP TPGLAIKD+WQVDD TIVFVADPTFGNILN
Sbjct: 102 GQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILN 161

Query: 158 FNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 217
           FNVG  VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIEAAV AIS CLREPVG +NC+E
Sbjct: 162 FNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNNCAE 221
[Close]
BLAST of Spo14484.1 vs. TAIR (Arabidopsis)
Match: AT5G52970.1 (thylakoid lumen 15.0 kDa protein)

HSP 1 Score: 297.7 bits (761), Expect = 7.200e-81
Identity = 142/180 (78.89%), Postives = 160/180 (88.89%), Query Frame = 1 

		  

Query: 38  KKWVSEVGSKSLKLALSSSLAIALSYNGVEYAEAKTGVNKPELLPKEYTTVIDVAGFLSS 97
           + WVS   SKSL L  S +LA+ LS +GV +A+AK GVNKPELLPKE+T+VIDVA FLS+
Sbjct: 42  ENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSN 101

Query: 98  GQEKRLAEEVADLEKDTGFKLRILAQNYPDTPGLAIKDYWQVDDRTIVFVADPTFGNILN 157
           GQEKR+A+E+A+LEKDTGFKLR+LAQNYP TPGLAIKD+WQVDD TIVFVADPTFGNILN
Sbjct: 102 GQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILN 161

Query: 158 FNVGDQVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVNAISYCLREPVGPSNCSE 217
           FNVG  VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIEAAV AIS CLREPVG +NC+E
Sbjct: 162 FNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNNCAE 221
The following BLAST results are available for this feature:
BLAST of Spo14484.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902195195|gb|KNA12771.1|1.0e-12199.5hypothetical protein SOVF_1229... [more]
gi|731345692|ref|XP_010684052.1|1.8e-9781.9PREDICTED: thylakoid lumenal 1... [more]
gi|719993769|ref|XP_010253980.1|1.1e-8376.2PREDICTED: thylakoid lumenal 1... [more]
gi|1021034032|gb|KZM91816.1|5.5e-8379.3hypothetical protein DCAR_0208... [more]
gi|1000965807|ref|XP_015574837.1|5.5e-8375.7PREDICTED: thylakoid lumenal 1... [more]
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BLAST of Spo14484.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZT4_SPIOL7.2e-12299.5Uncharacterized protein OS=Spi... [more]
A0A0J8BYB6_BETVU1.2e-9781.9Uncharacterized protein OS=Bet... [more]
A0A164WIG1_DAUCA3.9e-8379.3Uncharacterized protein OS=Dau... [more]
B9S0H8_RICCO8.6e-8376.0Putative uncharacterized prote... [more]
A9PJV2_9ROSI8.6e-8372.4Putative uncharacterized prote... [more]
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BLAST of Spo14484.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL15B_ARATH1.3e-7978.8Thylakoid lumenal 15.0 kDa pro... [more]
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BLAST of Spo14484.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G52970.17.2e-8178.8thylakoid lumen 15.0 kDa prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007621TPM domainPFAMPF04536TPM_phosphatasecoord: 88..203
score: 2.
NoneNo IPR availablePANTHERPTHR35514FAMILY NOT NAMEDcoord: 40..217
score: 2.2E
NoneNo IPR availablePANTHERPTHR35514:SF1THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTICcoord: 40..217
score: 2.2E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0048481 plant ovule development
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
cellular_component GO:0009543 chloroplast thylakoid lumen