Spo14757.1 (mRNA)

Overview
NameSpo14757.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L30
Locationchr6 : 36079227 .. 36081094 (-)
Sequence length568
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAACATAAACTCATTTCAGGCAGGTTTATTTTACGGGCTTTTACAATTCCATATTTATAAATAACCGTAAGTTCATCTCAAAAACCCTAATTGCTCAAGCCATCTCTAGTGTTGTTCATCTCTTTCTTGAAGCTCTCTCATCAACCTTCGCCGACGCCGCAATGGCCCCTTCCAAGAAGACGGTACTAATTTTTCCTCTCCAATTCATTATCATCAGTTCCTGTTAATTGAAATGTCTAATTGATTGATGATTTAAACAAAAATTAAAAATTGAATGTTTGGTTGAATTTGCAGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGGTAAACCCTAATTTTTTATTTAACATTTCTCAGTTTTGATTTTTTATTTTAAAGTTAGTATATTCTGTTCCCTGTTGTTGTAGCTGATTAATTTGCGAAGTTTTAGATCATTTTGAAGTCATTGTAAAAATAATAAAAATTGATTTATGAACTTGTGTTTGTTTATCTAATTTCTTCGGTGAAAATCCTGATGAATATGGTTTGCAAGAATATATTTTAGCTCCATCTGTATCTATTTAATCAGAACAAAGCCAAAAACCTGTTAATCCATTGAAAATCAGAACAAATTATATGCCTAATACAAATTCACTTTCTCTTATTCCTACTGCATTTGCACGTAAATTCAATCATTACTTACTCTTCACTCGACTTTTAATAAATTGCTAACTTTTTTGGCTGAATCAAAACGGCTTTATAATTGTTTACTTGTTTTCTTTTTATATGAAGTTGTATTTCTGTACTAATTAAAGCTTAATTTTGGGATCATAAATGTTTTGTTGATTGTGCTCTGGGTCGTGATGGCCTAATTGTGGTTGTTGAATATGTGGTTTAGTGGACATTCTAGTATTCTAAATTCATTTGCCCGTTTGTCTCTTTTGCCATCAATTAGTCTTTGAATGTACTCAAACTACTTTGGGTTTACTGTTTTTAAAATTGAACTTGCTGCTTTATTATAAACTTGTTCAAGATGTAATGCTTAGATATGTACTTGCTATTTCTTTCAGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAGTAAGTGTTTCTTGGAATCCAATCCGCATTGTTTTAGTGTCTATTGTTATTTGTTCTAAGGTATTGATGAAATATTTGCTCTGATAGTACTAGTAGGCAACTTGTTGATTTAGTACACAAGGTCTAAAGTTTGCAAGCATGCTTAAAGCATATAGCCAATTAGCCATATCCTAATACCAATTTTGCAACCCTACCCGTTTCATTTCACTTTGCTTTTAGTATGAGAATACATGCCACTACATGATTGGTGATTCATATGTGGCTGAGAATGTCTTGACTGCATACATTTGTTTCATGTAAATATATTCCAAGCTCTATTTTTCTCGAATAGTCATATTTCTTGATATTTATTTGTCGAGGTCTGTTTTCTGTTGGTTTACAGACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGGTGACTCAGATATCATCAAGAGCATGCCCGACCACTAAATTTGCTGTACCTTTAGGGTGAATTTATTTGGTTTTCTTGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

mRNA sequence

CCCAACATAAACTCATTTCAGGCAGGTTTATTTTACGGGCTTTTACAATTCCATATTTATAAATAACCGTAAGTTCATCTCAAAAACCCTAATTGCTCAAGCCATCTCTAGTGTTGTTCATCTCTTTCTTGAAGCTCTCTCATCAACCTTCGCCGACGCCGCAATGGCCCCTTCCAAGAAGACGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

Coding sequence (CDS)

ATGGCCCCTTCCAAGAAGACGAAGAAGACTCATGAGAGCATTAACAACAGATTGGCTCTTGTCATGAAGAGTGGAAAGTTCACTCTTGGGTACAAAACCGTCCTTAAGACCCTCAGATCTTCCAAGGCCAAGTTGATTATCATTTCTAACAATTGCCCACCCCTGAGGAAGTCTGAGATTGAGTACTACGCTATGTTGGCTAAGGTTGGAGTTCACCATTACAATGGAAACAATGTCGATCTTGGAACTGCTTGCGGGAAGTACTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGAAAGAAGTTTTGAAGAGCCATTATTCATAGGAACGTTTTTTAAATTTATATTCAGTGTTTTGGACATCCTTGCTTGTAGACATATATTTGGTGTTTTAATCAGTTGA

Protein sequence

MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAERSFEEPLFIGTFFKFIFSVLDILACRHIFGVLIS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14757Spo14757gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14757.1Spo14757.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14757.1.utr5p.1Spo14757.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14757.1.CDS.5Spo14757.1.CDS.5CDS
Spo14757.1.CDS.4Spo14757.1.CDS.4CDS
Spo14757.1.CDS.3Spo14757.1.CDS.3CDS
Spo14757.1.CDS.2Spo14757.1.CDS.2CDS
Spo14757.1.CDS.1Spo14757.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14757.1.exon.5Spo14757.1.exon.5exon
Spo14757.1.exon.4Spo14757.1.exon.4exon
Spo14757.1.exon.3Spo14757.1.exon.3exon
Spo14757.1.exon.2Spo14757.1.exon.2exon
Spo14757.1.exon.1Spo14757.1.exon.1exon


Homology
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|902209349|gb|KNA16188.1| (hypothetical protein SOVF_091420, partial [Spinacia oleracea])

HSP 1 Score: 201.8 bits (512), Expect = 7.400e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 112
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|902197326|gb|KNA13384.1| (hypothetical protein SOVF_117400 [Spinacia oleracea])

HSP 1 Score: 201.8 bits (512), Expect = 7.400e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|731348503|ref|XP_010685518.1| (PREDICTED: 60S ribosomal protein L30 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 192.6 bits (488), Expect = 4.500e-46
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1  MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIE 98
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|502102290|ref|XP_004492027.1| (PREDICTED: 60S ribosomal protein L30 [Cicer arietinum])

HSP 1 Score: 189.9 bits (481), Expect = 2.900e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. NCBI nr
Match: gi|356536572|ref|XP_003536811.1| (PREDICTED: 60S ribosomal protein L30-like [Glycine max])

HSP 1 Score: 189.9 bits (481), Expect = 2.900e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R367_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117400 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.100e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9J9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_091420 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.100e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 112
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171800 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.100e-46
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1  MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIE 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: I1L7D4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G257100 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.000e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PLT2_GLYSO (60S ribosomal protein L30 OS=Glycine soja GN=glysoja_034327 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.000e-45
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGKFTLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.300e-47
Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.400e-46
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 1 

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESIN+RLALVMKSGKFTLGYKTVL++LRS+K KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDA 100
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSIIDA
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDA 99
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.700e-42
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.700e-42
Identity = 81/98 (82.65%), Postives = 93/98 (94.90%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+ ++INN+L LVMKSGK+TLGYKTVL+TLR+SKAKL+IISNNCPPLRKSEI
Sbjct: 1  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKV VHH++GNNVDLGTACGKY+RVCCLSIID
Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIID 98
[Close]
BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.100e-41
Identity = 81/98 (82.65%), Postives = 92/98 (93.88%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 171.4 bits (433), Expect = 3.800e-43
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 170.6 bits (431), Expect = 6.400e-43
Identity = 81/98 (82.65%), Postives = 92/98 (93.88%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVD 98
[Close]
BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 168.3 bits (425), Expect = 3.200e-42
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 1 

		  

Query: 1  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
          M   KK KK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1  MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID 99
          EYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSI+D
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVD 98
The following BLAST results are available for this feature:
BLAST of Spo14757.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209349|gb|KNA16188.1|7.4e-49100.hypothetical protein SOVF_0914... [more]
gi|902197326|gb|KNA13384.1|7.4e-49100.hypothetical protein SOVF_1174... [more]
gi|731348503|ref|XP_010685518.1|4.5e-4695.9PREDICTED: 60S ribosomal prote... [more]
gi|502102290|ref|XP_004492027.1|2.9e-4593.8PREDICTED: 60S ribosomal prote... [more]
gi|356536572|ref|XP_003536811.1|2.9e-4593.8PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo14757.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R367_SPIOL5.1e-49100.Uncharacterized protein OS=Spi... [more]
A0A0K9R9J9_SPIOL5.1e-49100.Uncharacterized protein (Fragm... [more]
A0A0J8BU14_BETVU3.1e-4695.9Uncharacterized protein OS=Bet... [more]
I1L7D4_SOYBN2.0e-4593.8Uncharacterized protein OS=Gly... [more]
A0A0B2PLT2_GLYSO2.0e-4593.860S ribosomal protein L30 OS=G... [more]
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BLAST of Spo14757.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL30_LUPLU5.3e-4791.860S ribosomal protein L30 OS=L... [more]
RL30_EUPES3.4e-4689.960S ribosomal protein L30 OS=E... [more]
RL302_ARATH6.7e-4282.660S ribosomal protein L30-2 OS... [more]
RL30_ORYSJ6.7e-4282.660S ribosomal protein L30 OS=O... [more]
RL301_ARATH1.1e-4182.6Putative 60S ribosomal protein... [more]
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BLAST of Spo14757.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G77940.13.8e-4382.6Ribosomal protein L7Ae/L30e/S1... [more]
AT1G36240.16.4e-4382.6Ribosomal protein L7Ae/L30e/S1... [more]
AT3G18740.13.2e-4281.6Ribosomal protein L7Ae/L30e/S1... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000231Ribosomal protein L30ePANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 2..99
score: 1.2
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..102
score: 8.5
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
scor

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome