Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAAATAGCTGTGTCGTCCCCACCGTTCCGTATCTATAAAAGGTAATGAACTCAACCCTGGAGTCCGCCACTTACATCAAGCTACCTCATTAAATAACCATCCTATTCTACACAAAGAAAAAAAACACAGAGATCGAGAGAGAATGGCAGGAGGAAGAACAAGGCATGAGTCGAGGGACGATGATGACCATGATACGAATTTGGGATTAAACAAGTACCCAGATAAGCTACCACTTGGTACATCAGTTCCAGATTCATCAAAGGACTACAAAGACCCTCCTCCCGCACCCATGTGGGAACACGGCGAGCTCAGAAGATGGGCCTTTTGGAGAGCTGGTATTGCTGAATTCGTCGCTACCTTCTTGTTCGTCTATGTCTCCATTTTAACTGTCATGGGTGTTCTTCGTACTCCCAACAAGTGTAATACTGTTGGTATTCAGGGTATTGCTTGGGCTTTTGGTGGCATGATCTTTACCCTTGTTTACTGCACTGCTGGTTTTTCTGGTAATTAACTTATTTTTCCCTTTTTTGTGTAATGTAATTAAGAAAGATTATTAATTAATTACTGATTAAGTTGTTAAAATGAAATGGGGCAGGTGGACACATAAACCCAGCAGTGAGCTTTGGGATGTTATTGGCAAGGAAATTGTCGATAACAAGAGCAGTATTCTACATGTTAATGCAGTGTTTGGGAGCCATTTGTGGTGCCGGGGTGGTTAAAGGGTTCCAACCCACCCCATATGCTTTATTGGGTGGTGGTGCCAATGTGGTTGCTGAAGGTTATACAAAGGGTGCTGGTCTTGGTGCTGAGATTGTTGGCACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAATTGCAAGAGACTCTCCTATTCCTGTAAGTTCAATCTTCTTCTTCATTTGTTTTTAAATTATATTTACCATTAAGTTTACTTCTGGTCAACGATTTTAATTTTCATATTTGAATTTACATTAATATCAACCAATACCACAAAGTGGTACACAAATTGCATGTGGAACAGATAATTCAGACTTGTCACTAACACGGACATTTGACTAGAATTAACTGAAAATGTGACGGTCTTTTTGGGTGTTACTATAGATAGAGGTAGGACAAAAATTACAAACATGAGAATGAAGTAAATTTGTGTCTTTAATTTTCCTAATTAAGGTAGAAATGTATGCTGATTTCACCAATGGGGAAATTAAAGCTAAGGTATAATAGTGATGGACTGATTGTTTTTACATAAATGGATGGGGTTGTGTTGGATTTTCCTGCACCCGTTTTTTGCCACAGAAGTACTGGTTGGATTTAGAGAATTGAAATAATGTGTACATCACTTTCCAAAAATAGCTGGGGTTCGAGGGTGACTTGTCTCTTACTTCACTTTAATTACTTTTCGCTGTATAATTGGCTTCTTATGATAATTTCATTGAATTTCTATACTCCCTATCAAAATTCTAGCCATCTATTATGTGTGATCTACGTTCGATTATAGTCTAGTCATGCCATATATCTAGCCGACGTAGGTTAAGATTCTTCCGTTTATCGACCTAATGTTATCTGAATTGCCCTTATCTAACTTACTATTAAGATCTGGCCCATAAAACATCACGTATTGTTAACCTGGACCATGAAATATCACGTGTGTGGGTCCCACGTTGATAAAAATATAACAGATTGAGCGCGTTGCTTCCCTGATTGTCATATGGTTTTAAGGTGAAACCTCTTTTGATCTTGTAAAGTGGATTATCTTTTGACAACGGGCGCCGACCAATTCCGTATTTAACACTTATATTATAATATTGTCTGTTGTGGAGATCTGAATATATCTATGGAAAATGAATATTTTGTGGTTCGTACGTTACAGGTTTTGGCGCCTCTCCCAATTGGATTTGCGGTGTTTTTGGTCCACTTAGCAACTATCCCAATCACCGGAACAGGCATCAATCCAGCTAGGAGTTTGGGAGCTGCAATCGTCTACAACAACAGGCTAGGATGGGATGACCAAGTATATATATATATATTCCTTTACTATTAATAGCATTATTTAATTTCAATCATCTAATCCTTTTTAAGTAATAAATCTAGATCTTAAATCTTAATACTAAAATGTTTGACTGTTTTAAAAATAATTGCAGTGGATATTCTGGGTGGGACCCTTCATTGGAGCCGCTCTTGCTGCTGTGTACCACCAGATTGTTCTGAGAGCCATGCCCTTCAAGTCCAAGTCTAGCAGCAAAACTATAGCTTCTACTCCATAGTTTGCTTAATTAATTTGGAATTATATTAATTAAATATAGTTCTTTTTAATTTATCTTTTTTTTTTTTCCTCTCTCTCCTCTGAAATCTCCATTTTATTTTGTCGATCATTTTGTGCTTAATTAAATGTGTGTATTATTAGTACTATTACTATTATCGGGAACAAGATCAGCTTGTTGTAATTAATGGGTTTTGTCCATTTCGATCATCTCGTTTCTTTATCAGATCAATATGAGTGAGTGAATGAATGAATCATACATCCATCTAGCCTGTTGGGATTAAGACATTAATTGGCTTTGTATCATATACAGCATGTTACGTTATTGTTACAATAATTCATTGTGGCATGAATAATTTGACCTGAACTTGAAATCGAATA TCTAAATAGCTGTGTCGTCCCCACCGTTCCGTATCTATAAAAGGTAATGAACTCAACCCTGGAGTCCGCCACTTACATCAAGCTACCTCATTAAATAACCATCCTATTCTACACAAAGAAAAAAAACACAGAGATCGAGAGAGAATGGCAGGAGGAAGAACAAGGCATGAGTCGAGGGACGATGATGACCATGATACGAATTTGGGATTAAACAAGTACCCAGATAAGCTACCACTTGGTACATCAGTTCCAGATTCATCAAAGGACTACAAAGACCCTCCTCCCGCACCCATGTGGGAACACGGCGAGCTCAGAAGATGGGCCTTTTGGAGAGCTGGTATTGCTGAATTCGTCGCTACCTTCTTGTTCGTCTATGTCTCCATTTTAACTGTCATGGGTGTTCTTCGTACTCCCAACAAGTGTAATACTGTTGGTATTCAGGGTATTGCTTGGGCTTTTGGTGGCATGATCTTTACCCTTGTTTACTGCACTGCTGGTTTTTCTGGTGGACACATAAACCCAGCAGTGAGCTTTGGGATGTTATTGGCAAGGAAATTGTCGATAACAAGAGCAGTATTCTACATGTTAATGCAGTGTTTGGGAGCCATTTGTGGTGCCGGGGTGGTTAAAGGGTTCCAACCCACCCCATATGCTTTATTGGGTGGTGGTGCCAATGTGGTTGCTGAAGGTTATACAAAGGGTGCTGGTCTTGGTGCTGAGATTGTTGGCACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAATTGCAAGAGACTCTCCTATTCCTGTTTTGGCGCCTCTCCCAATTGGATTTGCGGTGTTTTTGGTCCACTTAGCAACTATCCCAATCACCGGAACAGGCATCAATCCAGCTAGGAGTTTGGGAGCTGCAATCGTCTACAACAACAGGCTAGGATGGGATGACCAATGGATATTCTGGGTGGGACCCTTCATTGGAGCCGCTCTTGCTGCTGTGTACCACCAGATTGTTCTGAGAGCCATGCCCTTCAAGTCCAAGTCTAGCAGCAAAACTATAGCTTCTACTCCATAGTTTGCTTAATTAATTTGGAATTATATTAATTAAATATAGTTCTTTTTAATTTATCTTTTTTTTTTTTCCTCTCTCTCCTCTGAAATCTCCATTTTATTTTGTCGATCATTTTGTGCTTAATTAAATGTGTGTATTATTAGTACTATTACTATTATCGGGAACAAGATCAGCTTGTTGTAATTAATGGGTTTTGTCCATTTCGATCATCTCGTTTCTTTATCAGATCAATATGAGTGAGTGAATGAATGAATCATACATCCATCTAGCCTGTTGGGATTAAGACATTAATTGGCTTTGTATCATATACAGCATGTTACGTTATTGTTACAATAATTCATTGTGGCATGAATAATTTGACCTGAACTTGAAATCGAATA ATGGCAGGAGGAAGAACAAGGCATGAGTCGAGGGACGATGATGACCATGATACGAATTTGGGATTAAACAAGTACCCAGATAAGCTACCACTTGGTACATCAGTTCCAGATTCATCAAAGGACTACAAAGACCCTCCTCCCGCACCCATGTGGGAACACGGCGAGCTCAGAAGATGGGCCTTTTGGAGAGCTGGTATTGCTGAATTCGTCGCTACCTTCTTGTTCGTCTATGTCTCCATTTTAACTGTCATGGGTGTTCTTCGTACTCCCAACAAGTGTAATACTGTTGGTATTCAGGGTATTGCTTGGGCTTTTGGTGGCATGATCTTTACCCTTGTTTACTGCACTGCTGGTTTTTCTGGTGGACACATAAACCCAGCAGTGAGCTTTGGGATGTTATTGGCAAGGAAATTGTCGATAACAAGAGCAGTATTCTACATGTTAATGCAGTGTTTGGGAGCCATTTGTGGTGCCGGGGTGGTTAAAGGGTTCCAACCCACCCCATATGCTTTATTGGGTGGTGGTGCCAATGTGGTTGCTGAAGGTTATACAAAGGGTGCTGGTCTTGGTGCTGAGATTGTTGGCACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAATTGCAAGAGACTCTCCTATTCCTGTTTTGGCGCCTCTCCCAATTGGATTTGCGGTGTTTTTGGTCCACTTAGCAACTATCCCAATCACCGGAACAGGCATCAATCCAGCTAGGAGTTTGGGAGCTGCAATCGTCTACAACAACAGGCTAGGATGGGATGACCAATGGATATTCTGGGTGGGACCCTTCATTGGAGCCGCTCTTGCTGCTGTGTACCACCAGATTGTTCTGAGAGCCATGCCCTTCAAGTCCAAGTCTAGCAGCAAAACTATAGCTTCTACTCCATAG MAGGRTRHESRDDDDHDTNLGLNKYPDKLPLGTSVPDSSKDYKDPPPAPMWEHGELRRWAFWRAGIAEFVATFLFVYVSILTVMGVLRTPNKCNTVGIQGIAWAFGGMIFTLVYCTAGFSGGHINPAVSFGMLLARKLSITRAVFYMLMQCLGAICGAGVVKGFQPTPYALLGGGANVVAEGYTKGAGLGAEIVGTFVLVYTVFSATDPKRIARDSPIPVLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNNRLGWDDQWIFWVGPFIGAALAAVYHQIVLRAMPFKSKSSSKTIASTP Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo14763.1 vs. NCBI nr
Match: gi|902239227|gb|KNA25510.1| (hypothetical protein SOVF_005960 [Spinacia oleracea]) HSP 1 Score: 619.4 bits (1596), Expect = 3.400e-174 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
BLAST of Spo14763.1 vs. NCBI nr
Match: gi|379319199|gb|AFC98465.1| (aquaporin [Atriplex canescens]) HSP 1 Score: 496.5 bits (1277), Expect = 3.300e-137 Identity = 251/309 (81.23%), Postives = 268/309 (86.73%), Query Frame = 1
BLAST of Spo14763.1 vs. NCBI nr
Match: gi|567160671|ref|XP_006396241.1| (hypothetical protein EUTSA_v10028860mg [Eutrema salsugineum]) HSP 1 Score: 469.9 bits (1208), Expect = 3.300e-129 Identity = 225/286 (78.67%), Postives = 253/286 (88.46%), Query Frame = 1
BLAST of Spo14763.1 vs. NCBI nr
Match: gi|18411332|ref|NP_567178.1| (plasma membrane intrinsic protein 1;4 [Arabidopsis thaliana]) HSP 1 Score: 468.8 bits (1205), Expect = 7.400e-129 Identity = 222/283 (78.45%), Postives = 252/283 (89.05%), Query Frame = 1
BLAST of Spo14763.1 vs. NCBI nr
Match: gi|922457333|ref|XP_013630573.1| (PREDICTED: probable aquaporin PIP1-4 [Brassica oleracea var. oleracea]) HSP 1 Score: 468.4 bits (1204), Expect = 9.700e-129 Identity = 223/287 (77.70%), Postives = 254/287 (88.50%), Query Frame = 1
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S185_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005960 PE=3 SV=1) HSP 1 Score: 619.4 bits (1596), Expect = 2.400e-174 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Match: H9B3S0_ATRCA (Aquaporin OS=Atriplex canescens GN=AQP PE=2 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 2.300e-137 Identity = 251/309 (81.23%), Postives = 268/309 (86.73%), Query Frame = 1
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Match: V4L225_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028860mg PE=3 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 2.300e-129 Identity = 225/286 (78.67%), Postives = 253/286 (88.46%), Query Frame = 1
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Match: E4MXF5_EUTHA (mRNA, clone: RTFL01-26-P19 OS=Eutrema halophilum PE=2 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 2.300e-129 Identity = 225/286 (78.67%), Postives = 253/286 (88.46%), Query Frame = 1
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Match: A0A0D3B963_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 6.700e-129 Identity = 223/287 (77.70%), Postives = 254/287 (88.50%), Query Frame = 1
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 4.600e-131 Identity = 222/283 (78.45%), Postives = 252/283 (89.05%), Query Frame = 1
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 459.9 bits (1182), Expect = 2.200e-128 Identity = 220/283 (77.74%), Postives = 251/283 (88.69%), Query Frame = 1
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 6.300e-128 Identity = 218/283 (77.03%), Postives = 250/283 (88.34%), Query Frame = 1
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 6.900e-127 Identity = 215/283 (75.97%), Postives = 250/283 (88.34%), Query Frame = 1
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 9.000e-127 Identity = 215/283 (75.97%), Postives = 249/283 (87.99%), Query Frame = 1
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Match: AT4G00430.1 (plasma membrane intrinsic protein 1;4) HSP 1 Score: 468.8 bits (1205), Expect = 2.600e-132 Identity = 222/283 (78.45%), Postives = 252/283 (89.05%), Query Frame = 1
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Match: AT4G23400.1 (plasma membrane intrinsic protein 1;5) HSP 1 Score: 459.9 bits (1182), Expect = 1.200e-129 Identity = 220/283 (77.74%), Postives = 251/283 (88.69%), Query Frame = 1
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Match: AT1G01620.1 (plasma membrane intrinsic protein 1C) HSP 1 Score: 458.4 bits (1178), Expect = 3.500e-129 Identity = 218/283 (77.03%), Postives = 250/283 (88.34%), Query Frame = 1
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Match: AT3G61430.1 (plasma membrane intrinsic protein 1A) HSP 1 Score: 454.5 bits (1168), Expect = 5.100e-128 Identity = 215/283 (75.97%), Postives = 249/283 (87.99%), Query Frame = 1
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Match: AT2G45960.3 (plasma membrane intrinsic protein 1B) HSP 1 Score: 399.4 bits (1025), Expect = 1.900e-111 Identity = 190/251 (75.70%), Postives = 220/251 (87.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14763.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14763.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14763.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14763.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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