Spo14875.1 (mRNA)

Overview
NameSpo14875.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L14, chloroplastic
LocationSuper_scaffold_65 : 1291118 .. 1294028 (+)
Sequence length1156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGTAACTTGGTAGAAAATGGGGGTAAAAGAAGAAGAAAAGAATTAAAGAAGTTCAATTAACATTCCTTGAAAAAAAAAAAAAAATCAATTAATACTTTAGAAAAGATGACCTCAAAATAAAATTAAAAAAAAAAGGAAAAAAGAAAGGACATTTTGGGAATTACAGAAGCAGAACCATAGTGAGAATAAGGAGCCCCGAAACCCTAATTTGAGGGCCTGGTATATAAATTACCCTCAAAACCCTAATCGTTGTTTTTCTTTCCTCTATTCTCTGTTACCTTTCTTCTCCTGCGGCGAAAATGTCGAAGCGAGGTATTCATTCAATCTCAATCACTCTTTCGATGTTATTACTCTTATTTGCTTAATTAAACCATTCGAATCCCCAGATTTTCATTTATCTCTGTGATTAATTTAATTATGTATGCTGTTAGAAATGTTTAGATCAAATAAGCTATACAAAACAGCTTAAAATCATATCATTTTAATATGTTATTACAAATATTTGTGCTATGAACTGAGTAAATTGATCTGTGCTTCATTGTTTCGGCTCCATTTTGATTATTGCAAATGGGTTTTTTTAGAAATTGAAATCTCACCATGATTAATGTAGTTTTATTGTTCAGTTTCTGTATTTTGTACTTAAATTATACTTGTTCCGAGAGTTTAAAAGAAGATCAAAACTCAATGATTTGTGGGATCTATAGCATCGATTTACAAAGAAATGGAAATCTATCTTGGACATAATTTGCAGTTTATGTTTATTTGTAGTCGTTAATCCCGATGCTTTATTTATTTGGTTTGTTGGGAATTGTTAGTCAAGTTTTGTTGAATTTAGTTTAAGATTTTTGATTGATTCTGACCTGGAATTTTCAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGGTTGTTATTTAATTCTATACTTCAATTTGCTTTCTGTGCTTGTTTATTAGTAGAATCTCCATTTTAGATTAACTCAGAAAATCTTATGCATATGTTATCCATACTTGGTTCTGCAATCGAAACAAAAGAGTTTGGTTTCCCTGTATTTCTAGTGAAACATGCAAAGTTAGTGTCTTAAGATCCCCTTTCCGTATGCTGGTTTCATTTGTCATCTTTATCATGTGTTGGCCTAGTATTAGTATTTTTACCGTAGTTGCTAATTTTCTGTATCTCTTCTTCGTGTTCAAAGTTTTCTAACCCTTAAATTGAGTCTTATAAGGGTTTAATGTCTATTATTTCTGCACTTTTAGTACTACCCTTATTGATGCTGGAACTAGGGATGCCAATAAATTTCTTGTAAATTTCGGTCCCTTTGTTGGGGTACCTATGCGGCTATGCCTACAATGGATAGAGGCAGATTTGCCTTTGTTATGCCTTGTTTCAGGGATTATTCTGCATTGACTATTGAGTTTCTTCCTTCAGTCTTGCCTTTAAGAAAATAGAATAGATCATTTCTTTTGTGTGCTTCTTAGCTTTTTTTAAAAGATACATGTGGCTTGCTGGTTCTACTCTTCTGTTTCTTATAATAGTCTTTTCCCCGTGTTCATATAGATTTTCTCATAATCACATGTTGGTCTCTGTTACAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGTAAGTGACAGCTGTTGTGATTAGTCATCTTTCTCTCCATGCACTTCTTTGCAAACTTGATTTTGAACCAAACATAATGATCTATAGAATTGAACATCTCAAAATTCACATTTGTCATGTCTGTCCACTTTCATGTGTGTATTCAAACTTTTGTGTTCTGTGACTTCTGTTCTTGATAAAATGATGGACTTTCCTCTGATGTTTTGGACTGGCCTCTGGTAGTTAGCTGTTGTTTGGATGCAAAACTTGACATCTTCCATTGTTATTAATCTCTATTGGATGGGTCTTTCACCTCCATGGCAGTGTTCTGCATTCCAACTAGAACCATTAAATATCTAGAACATAAACTATGGCGAAAAGTGTTTTTGATGTCACAAATTCGGCAATATGTCTTCCCTGCATTTGTGTCATGGACTCATGGGTGTAATAAGCTTGATTGAATTTGTCAATAAGCTAATTTAGTTTTTACCAATTTATAGTTCTTGACAAAGTTTGGTTTTTGTTTCAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAGAGATTGTCAGTTCAGATTTCAGTTCAGATAATCAGTTCAGAAGTTTGTTAAATTTTGGTTTGCTATAGTTGGTTTGCTATAGTTCAAATGTTTGTAGTTGGACAAAGGAACAATGCGTTCGCATATGTGAATTCAGCTTATGATTAGATCTTAAATACTCAGTACTTCGTTTTTGATTCTGATTGTCTTGTGAAATGACCATGTTTATGTTTTATTCTGATTTCCTGCAGTAATATTTATCCAAATTTTGTTCTGTGTTATTTTAAACATACGAAAACTATGGAAATACATGTTCACAAAGCTTCGTTTTTCAACCACAGTAATGTATTGCGAATTCTACAAACACCACATGAAGATAAACAGCTAATTTATTGAGTACATTGTATTACGGATTCCTTCAGCTGTGATGATAGAAGCCAACGGAATTAAGGG

mRNA sequence

TCCGTAACTTGGTAGAAAATGGGGGTAAAAGAAGAAGAAAAGAATTAAAGAAGTTCAATTAACATTCCTTGAAAAAAAAAAAAAAATCAATTAATACTTTAGAAAAGATGACCTCAAAATAAAATTAAAAAAAAAAGGAAAAAAGAAAGGACATTTTGGGAATTACAGAAGCAGAACCATAGTGAGAATAAGGAGCCCCGAAACCCTAATTTGAGGGCCTGGTATATAAATTACCCTCAAAACCCTAATCGTTGTTTTTCTTTCCTCTATTCTCTGTTACCTTTCTTCTCCTGCGGCGAAAATGTCGAAGCGAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAGAGATTGTCAGTTCAGATTTCAGTTCAGATAATCAGTTCAGAAGTTTGTTAAATTTTGGTTTGCTATAGTTGGTTTGCTATAGTTCAAATGTTTGTAGTTGGACAAAGGAACAATGCGTTCGCATATGTGAATTCAGCTTATGATTAGATCTTAAATACTCAGTACTTCGTTTTTGATTCTGATTGTCTTGTGAAATGACCATGTTTATGTTTTATTCTGATTTCCTGCAGTAATATTTATCCAAATTTTGTTCTGTGTTATTTTAAACATACGAAAACTATGGAAATACATGTTCACAAAGCTTCGTTTTTCAACCACAGTAATGTATTGCGAATTCTACAAACACCACATGAAGATAAACAGCTAATTTATTGAGTACATTGTATTACGGATTCCTTCAGCTGTGATGATAGAAGCCAACGGAATTAAGGG

Coding sequence (CDS)

ATGTCGAAGCGAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAG

Protein sequence

MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADLWPRIASAANAIV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14875Spo14875gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14875.1Spo14875.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14875.1.exon.1Spo14875.1.exon.1exon
Spo14875.1.exon.2Spo14875.1.exon.2exon
Spo14875.1.exon.3Spo14875.1.exon.3exon
Spo14875.1.exon.4Spo14875.1.exon.4exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14875.1.utr5p.1Spo14875.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14875.1.CDS.1Spo14875.1.CDS.1CDS
Spo14875.1.CDS.2Spo14875.1.CDS.2CDS
Spo14875.1.CDS.3Spo14875.1.CDS.3CDS
Spo14875.1.CDS.4Spo14875.1.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14875.1.utr3p.1Spo14875.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|902165843|gb|KNA07164.1| (hypothetical protein SOVF_174280 [Spinacia oleracea])

HSP 1 Score: 282.0 bits (720), Expect = 5.900e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|922340291|ref|XP_003625359.2| (60S ribosomal L23-like protein [Medicago truncatula])

HSP 1 Score: 279.3 bits (713), Expect = 3.800e-72
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|902209937|gb|KNA16312.1| (hypothetical protein SOVF_090210 [Spinacia oleracea])

HSP 1 Score: 278.9 bits (712), Expect = 5.000e-72
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|568215140|ref|NP_001274965.1| (ribosomal protein L17-like protein [Solanum tuberosum])

HSP 1 Score: 277.3 bits (708), Expect = 1.400e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|629094248|gb|KCW60243.1| (hypothetical protein EUGRSUZ_H02959 [Eucalyptus grandis])

HSP 1 Score: 277.3 bits (708), Expect = 1.400e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 72  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 131

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 132 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 191

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 192 IGKECADLWPRIASAANAIV 211
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIT9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174280 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.100e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: B7FMQ6_MEDTR (60S ribosomal L23-like protein OS=Medicago truncatula GN=MTR_1g069585 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 2.600e-72
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_090210 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.500e-72
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: M7ZJF7_TRIUA (60S ribosomal protein L23 OS=Triticum urartu GN=TRIUR3_02289 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.000e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: M8C7X0_AEGTA (60S ribosomal protein L23 OS=Aegilops tauschii GN=F775_07694 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.000e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3)

HSP 1 Score: 273.9 bits (699), Expect = 1.000e-72
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.300e-72
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA +NCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.300e-67
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+GNKFRMSLGLPV AVVNCADNTGAKNLY+IS  G++GRLNRLP+A  GDM
Sbjct: 1   MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 139
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.500e-64
Identity = 120/139 (86.33%), Postives = 130/139 (93.53%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+G KFR+SLGLPV AV+NCADNTGAKNLYIISVKGIKGRLNRLPSA  GDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAI 140
           +AKECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.900e-63
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+G KFR+SLGLPV AV+NCADNTGAKNLYIISVKGIKGRLNRLP+A  GDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAI 140
           +AKECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 65.9 bits (159), Expect = 2.300e-11
Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = 1 

		  

Query: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDL---RKKVMPAVIV 85
           +N ADN+GA+ L  I + G   R      A  GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADL-WPRIASAANAIV 141
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A  ++
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL 122
The following BLAST results are available for this feature:
BLAST of Spo14875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902165843|gb|KNA07164.1|5.9e-73100.hypothetical protein SOVF_1742... [more]
gi|922340291|ref|XP_003625359.2|3.8e-7298.560S ribosomal L23-like protein... [more]
gi|902209937|gb|KNA16312.1|5.0e-7298.5hypothetical protein SOVF_0902... [more]
gi|568215140|ref|NP_001274965.1|1.4e-7197.8ribosomal protein L17-like pro... [more]
gi|629094248|gb|KCW60243.1|1.4e-7197.8hypothetical protein EUGRSUZ_H... [more]
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BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QIT9_SPIOL4.1e-73100.Uncharacterized protein OS=Spi... [more]
B7FMQ6_MEDTR2.6e-7298.560S ribosomal L23-like protein... [more]
A0A0K9RBZ6_SPIOL3.5e-7298.5Uncharacterized protein OS=Spi... [more]
M7ZJF7_TRIUA1.0e-7197.860S ribosomal protein L23 OS=T... [more]
M8C7X0_AEGTA1.0e-7197.860S ribosomal protein L23 OS=A... [more]
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BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL23_ARATH1.0e-7295.760S ribosomal protein L23 OS=A... [more]
RL23_TOBAC1.3e-7295.760S ribosomal protein L23 OS=N... [more]
RL23_TORRU1.3e-6790.760S ribosomal protein L23 OS=T... [more]
RL23_DANRE8.5e-6486.360S ribosomal protein L23 OS=D... [more]
RL23_HUMAN1.9e-6385.660S ribosomal protein L23 OS=H... [more]
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BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G04480.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
AT2G33370.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
AT3G04400.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
ATCG00780.12.3e-1133.6ribosomal protein L14[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3D2.40.150.20coord: 11..140
score: 1.3
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 19..140
score: 19
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..140
score: 6.2E
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 22..140
score: 3.4
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 19..140
score: 2.8
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 11..140
score: 1.2
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 79..105
scor
NoneNo IPR availablePANTHERPTHR11761:SF10SUBFAMILY NOT NAMEDcoord: 1..140
score: 6.2E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003735 structural constituent of ribosome