Spo15198.1 (mRNA) | SpinachBase

Overview


Name	Spo15198.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	chr1 : 27201268 .. 27206765 (+)
Sequence length	1826

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAACTTCCTTGACCAATACGAGTATATGACCATCGATAGCCTCGTATCTTAGAGATGTTTTATAGTCTTTGTGGAGTAGTCCTGTTGTTGCCCGTAACAAATCAAACGCCCTTCTCCATTTTCTCTCTCCTCCGCCCTTCCTGGGGCACCTCAAAAGCAAACCAACAACACCAAAAACAGGCCTAAAACCTCCCCACCCCACCTTTTCTCTTCTCCTTCACCTACTCTTCAATGGAGTAGCAGAGACAACCCCACTTACAAGAACAAGGAGAAGCTATAAGGACAGAGAAACAGGCAAAACCCCACTTGTATAAATCTCACAATAATACCACACCCAGTTTTTTTTCAAGGCATTTTGATGACCTTTCATGAAAATTATCCCCAATGTCAACCATAATGCCAACCCATGTTGTTGATATTGAGCAAGGAATTAGTCGCCGGTGCTCCAACACTACCGTCGGCGAGGTTTCCGACGAGGAGAGTGTCCGTTGCTCCGATGGAGAAAGCAGCAGTAGCAGCAACAGCTCAGCTGAGTGTTGTACAAGGGTTGTTGGTGGAGTGGGTGAAAATGTTGGTAGTGGGAGGTTGACTGAGAAAAGGAGGTCGCCGTCGTCTTCTTCTTCGTGTTTATCGGAGTTTTCGGTGGAAGAGGTGGTGGATCTGGAGAGAGGTGGAGGCGGAGTGGCGGCTGTGGAGACGAAAACGGCGGTGCATTTGTCGAAAGTCGAGAGAGATTGTAGAATTTGCCACCTGAGTTTAGATGGGTCGAACCCTGAATCTGGTTTCCCAATTGAGTTGGGATGTTCTTGTAAAGAAGATTTAGCTGCTGCCCATAAACACTGCGCTGAAGCTTGGTTCAAAATTAGGGGTAACAAGTAAGTTACTTGATTATACTACTACTGCTAGTCTGCTACTACTTATTTGCTTTTAGTTTCTTAATTTATTTTGGAATTTACCTCATTTCTTACTTAATTGTAATTTATAAGCTTAATTAACTGTGTCTAGTTTGTTGATTTTCTTGCTTACACCTTCTGATTTGACATGGATGTTGTGATTTTTTTTGATTTTTAGCTTTAGTCTTGCTTGTTTTGGGGTTATGGAGTCAAAGAGTTTTGTTACTGTTCATGATAAATCAATGTGTTAATTGATGTTTAGGTGATAAATCATTAGTGCTTAGTCACCGAAATGCCAGATTACTTGGATTCTTGCCGGTTTCGCTTCGAAAATGGTCCTTGTATTTGGGTCATTTGTGAGTGGGTATGACTCATCTTGGATGCTTTATACTCTGGCTCATTGGGAGATTTGATTAGGTAATCCATAAAAGAAAGCTTGTATTCTATGAAAGGTATATTGGTGCACTAAGAAATAAGAATTGACACATTTTTGTGTATTGGATAAAAGAAGGGAAAATCTGTTATAAACAAAGTAAAGTTGGTACAAAAATGAATGAGGGAATCAAGTTATAAATAAAGCAAAAGGTGAGGACCATGGGGTACTCTGCTTGTTTATCTAATTTATTAGATTCTCAACTTAAGCTCATTACGTATAACTGAAGTTTTCTTTATTAAAATTTTCTGTATCAAATGTCGGCAACTTCCTTTTTAGTTAATTATTTATTGAGATGTTTTAGTCATATAGTGATTTAGCAACTGCATCTGTAACATGTGAATAATTTGCTGACTTTTCTGAGTAGCTGTTGTGCTGAAGGTGGTTGTTATCAATTCCTGTCATGTGAAACATGAAGGGGAGAAAATACCAATGTCTACTTAATCCTATGGCCTGCTTGGATTCTCCGGCTTTTAGTTATTATTATTAATTGTAGTTCATATCGAAATGACACCCAGTTATGGAAATTGGCAAGTGGATAATTGTGAATTCAATCCCATTAAGAATATCCTTCTTTCCCATGCGCCTTTTAATATTTTTTCGGTGAGCAAATGACACTGGCAGAAGAGATTCTATGTTATTTGCATAAACGATTTATTGATATATATCTTTTTTGGTGCGAATTTATTGATATTTTTAGCTATAACATATGTGTTGAAGAATCTAGCATCCTCTCACATTGACATTTGACAGTTGATTTGTTGTTACTTATTGGACATTTCCATGCTGTCATATTCTTGAATATGTGGCTGATTTGACAATTTTGGTAATATTTCATGTCTAAGAGGAGGGAGTTCAAAATTAATACGAGTTGAGTTTAAATACAGATTGTTAAGTTACATGTCAGCATTTTGACTAATTAATATGAGTTGAGTACTGTTTTTGTGTAAAACTTTCTAGATAATGTTGTATTCGTGTTTTCTATTTTTTCTGATTTGATCTGGGTTTCGAGGTGTGTAATTGAAGTGAAAGGGGTCACTAAATAAGAGCAGAAGATGATACAAGTATGTGTTTTAGACTTATTTAGGGCCTAGTTTGTTCTGTTTCAAGGCGTACTATATAAATTTCCTTGTTCGAACCTGGACTCACACTGTAATATGTATTCCTTAAGAGTTAAAATCATTTAAACTCTCTCCTTTTTCTGGTGGACGTAGCTAACACATTGTTCGTGAATCAGCCCAACCACGTTAAATCTGTGAATTCGTGTTTGTTGATTTCTTTAACCTTTCTCATGTCTTTTGTAACAGTATGTCTTATATGTGATGTTATTGCAACACCCCAAGATTGTATCCCACCAAGTCATTGAATCAGCCCTGCTCAAGTAGTCGAGTTTGATAGTGGCTAGATGCTTTAGAACATTGACAAGTTGTGCAATGAACTTCAACTGTTAATAAGTACTCAAGAATGCCGTATAAATAGCGTCAAGTAGGTTTGAACACTAAAAAGCATAGTTGGCTTTTGCAGTGTATCGTTGTCTAAAACTGAAAGCTTTTGTTGGCTGGTTCCTTTTTCAGACTCCGTAAAGCAGGGTTTGTCAAGTTCTTTGCTGTTCGTTCCACTCATATATAACTCTTGTTTGATCAATACAATAATCCAAATGCTTTTTCTTTTTCTTTGAGTATTCAATGACTCAAAGTTCTTATGGTTTTGCTTCTCTTATTTTAATAACTATTCAATTCTCAACTTATTACCTTCTTTTTCTTTTTGAGGTGGTTTAATTGTATTCCTCATTTCATCATCTAGTCATTTCCTGTAAAATTTCCAGCATTCTTAATTGGCAAGTTGTACGTAGAACCCCTACCTTGTTTCCTTAAGCGGGTTTGCATGTAAGGATGGAACCGGTCTGGTTTTGAGGAGTGTGCTTTTGGTCTACTGTAAAGTGTCTCTTGTTGTGTACTGTTGAACATTTAGAGGCTCGGTATAGGTATCTTGGAACAGAATAAAGAGTTGTACTTCGTATTTACTTACTAAGTTGCATGATTTTCTTATGTGGATGATGGATCTGCAAATGGACTTGTGACATGCCATTGAGCTTCTTTGCTCCATATGTGCATCTGTGTTGCTAGCAGGTTCTTTTCACTTTGTATAATCTCACTCCGTTACTCTGCAGCTAGAAGTATTTATTTGTATATGTCAATGTGGTTCTTATTTTATTTTATTTTTATTTTGGCCACTCGCTTTTGTTAATGCAATAAGCCAATAACTAAGTTTGCTAAGATGGTTGGCAATGGCATATCCGCAGGATATGGTATTTGGGGAGTTCAGAACCAGTGAGTGTGTATATAATGGAGGATTTTAGTATATTTAAGATGTCATTCGTTATAAAATAAAAGCATGTCACGAGAAATCTAAGTTGACATTTATAATTTTGAACTGTCTGTGGGATACTGGTTTTGAAGATTTTTCCATTTGTGGTTTACTCTTAATGTCTTTGGATGAATATATTAGAACTTAAAGCAGTATCTATGCGTTGATTTATAATGCTCCAAAGTTCGAAGTGTTAGATGTGTTATATTGATCTTTATTTATAAAACCTACTGTATATTGTTATTCAGTCCAACCTATAGCAGGGGAGGGTAAAAGGAGGAAATAATACAATTTATGTCTGGATTTACTGTTTGCCGCTTTGCCATGTATTGGGATACACTTGAATGCCTCAAAGTCTAGTGATTTTCGGTTTTCTGAAGATAGAATAACATGTGCTGAACTAAAATCTACTTCCTCTAGGACCCCAGCGTGTTAATAATCCTAGCATCCCATTCATTTACACTCCGTACTTCATGATACTACTACTTGTTCTCACGCAAATAAAAAAGAAAGGAAAGAGTCGAGGGGATGTGTGGGCCGAATTCTATATGGATTCAAGGCAGCATATTGCTCCATCTGGGTATAGATCTCTAAAATTTTGATATCTATGGAGTTTTCCTTTTTTCAGTAGGAGCTTAATGTATGCAGAATTGCACCTTTGATAAAATGTCTGGGTTACATTTCCTTTGTATTTCAAAGATGTTAGATATAATGTGCCTATTTAGTTTTTGTTATGTTTTCTCTCGTCCCATTCTAAAAAAGTTCAATATCATTGAGAAAGTACTGTATTGAAATCAAGTTTGGAATAATAAATCTCAGTCATTAAATCCTTTATTTGGCTTGAATTGGTACAGAACCTGCGAGATATGTGGTTCAACAGCTCGCAATGTGGTAGGTGTAAATGAAGTAGAGCTAATGGAGCAATGGAATGAGGCTAACGATCCTGCGCCCACGGTTGCTCCACCCCATCAACCTGAGACTCGGCATTTCTGGCAAGGGCATAGGTTTCTGAATTTCCTGCTGGCCTGTATGGTCTTTGCCTTTGTCATCTCTTGGCTCTTTCACTTCAATGTCCCTTCTTAAGATTCCTGTACAGAACCGTGGCAAGTTGTTGTAATTTTCAAGAAAAAAAAGACAGAAGCGTATCTGCAAAAAAGCTCCATCAGCAAAAATGCAGGTATCCTTCTTTGTAGTCCACTTTCATTAGGCAATGTTTGTTTATAGTACGTATTAGATTAGCCCCAAGAGCTGTTTAGCGAACAGCTCCGTTTCATGTCATGTTGTACTAATTATGCAATTCATCTCGAGGACAATTAAGGAATTTGTCTGTTTAAGATTCGAGTCCATCGTTTGCATTCACTGGAAAGAACCCCCAACTGTATAACAAAGTTTTTAAAGAGGAGGAAAGAGATCTTCCTACTTCCCAGTAATGTATTACTGTTTGCGATGGAAATTGAGTTTCTATCCAGAAGCTAATTAGGTTTTGCTAGCTTTCTTTCTTTTATTGTGATACGGAAAAGTAGAAAAAGTGTGTCTGTTGAAGAGACTCGGTTGCATCTGCTTTATTGCTGTAAAAGAGGATTATGCTGTTTTTTTAGGATTAAGTTTGTTTTACATGTAATTCTTCAAAGGCTAAGGCTACAATGTGACACAATTAAGCCGAGGATGTCTTGATAAACTGTATGAATTGACTAAAGGGCCTTTGCTTATCTGTTGTTAATGCAATGTGGATTATGGGTGTAAATGGTGTCATTAATTCATAATTTCAAAGGTAATGGGCCCTACTTATATTACTTATAAGCA

mRNA sequence

ATTAACTTCCTTGACCAATACGAGTATATGACCATCGATAGCCTCGTATCTTAGAGATGTTTTATAGTCTTTGTGGAGTAGTCCTGTTGTTGCCCGTAACAAATCAAACGCCCTTCTCCATTTTCTCTCTCCTCCGCCCTTCCTGGGGCACCTCAAAAGCAAACCAACAACACCAAAAACAGGCCTAAAACCTCCCCACCCCACCTTTTCTCTTCTCCTTCACCTACTCTTCAATGGAGTAGCAGAGACAACCCCACTTACAAGAACAAGGAGAAGCTATAAGGACAGAGAAACAGGCAAAACCCCACTTGTATAAATCTCACAATAATACCACACCCAGTTTTTTTTCAAGGCATTTTGATGACCTTTCATGAAAATTATCCCCAATGTCAACCATAATGCCAACCCATGTTGTTGATATTGAGCAAGGAATTAGTCGCCGGTGCTCCAACACTACCGTCGGCGAGGTTTCCGACGAGGAGAGTGTCCGTTGCTCCGATGGAGAAAGCAGCAGTAGCAGCAACAGCTCAGCTGAGTGTTGTACAAGGGTTGTTGGTGGAGTGGGTGAAAATGTTGGTAGTGGGAGGTTGACTGAGAAAAGGAGGTCGCCGTCGTCTTCTTCTTCGTGTTTATCGGAGTTTTCGGTGGAAGAGGTGGTGGATCTGGAGAGAGGTGGAGGCGGAGTGGCGGCTGTGGAGACGAAAACGGCGGTGCATTTGTCGAAAGTCGAGAGAGATTGTAGAATTTGCCACCTGAGTTTAGATGGGTCGAACCCTGAATCTGGTTTCCCAATTGAGTTGGGATGTTCTTGTAAAGAAGATTTAGCTGCTGCCCATAAACACTGCGCTGAAGCTTGGTTCAAAATTAGGGGTAACAAAACCTGCGAGATATGTGGTTCAACAGCTCGCAATGTGGTAGGTGTAAATGAAGTAGAGCTAATGGAGCAATGGAATGAGGCTAACGATCCTGCGCCCACGGTTGCTCCACCCCATCAACCTGAGACTCGGCATTTCTGGCAAGGGCATAGGTTTCTGAATTTCCTGCTGGCCTGTATGGTCTTTGCCTTTGTCATCTCTTGGCTCTTTCACTTCAATGTCCCTTCTTAAGATTCCTGTACAGAACCGTGGCAAGTTGTTGTAATTTTCAAGAAAAAAAAGACAGAAGCGTATCTGCAAAAAAGCTCCATCAGCAAAAATGCAGGTATCCTTCTTTGTAGTCCACTTTCATTAGGCAATGTTTGTTTATAGTACGTATTAGATTAGCCCCAAGAGCTGTTTAGCGAACAGCTCCGTTTCATGTCATGTTGTACTAATTATGCAATTCATCTCGAGGACAATTAAGGAATTTGTCTGTTTAAGATTCGAGTCCATCGTTTGCATTCACTGGAAAGAACCCCCAACTGTATAACAAAGTTTTTAAAGAGGAGGAAAGAGATCTTCCTACTTCCCAGTAATGTATTACTGTTTGCGATGGAAATTGAGTTTCTATCCAGAAGCTAATTAGGTTTTGCTAGCTTTCTTTCTTTTATTGTGATACGGAAAAGTAGAAAAAGTGTGTCTGTTGAAGAGACTCGGTTGCATCTGCTTTATTGCTGTAAAAGAGGATTATGCTGTTTTTTTAGGATTAAGTTTGTTTTACATGTAATTCTTCAAAGGCTAAGGCTACAATGTGACACAATTAAGCCGAGGATGTCTTGATAAACTGTATGAATTGACTAAAGGGCCTTTGCTTATCTGTTGTTAATGCAATGTGGATTATGGGTGTAAATGGTGTCATTAATTCATAATTTCAAAGGTAATGGGCCCTACTTATATTACTTATAAGCA

Coding sequence (CDS)

ATGTCAACCATAATGCCAACCCATGTTGTTGATATTGAGCAAGGAATTAGTCGCCGGTGCTCCAACACTACCGTCGGCGAGGTTTCCGACGAGGAGAGTGTCCGTTGCTCCGATGGAGAAAGCAGCAGTAGCAGCAACAGCTCAGCTGAGTGTTGTACAAGGGTTGTTGGTGGAGTGGGTGAAAATGTTGGTAGTGGGAGGTTGACTGAGAAAAGGAGGTCGCCGTCGTCTTCTTCTTCGTGTTTATCGGAGTTTTCGGTGGAAGAGGTGGTGGATCTGGAGAGAGGTGGAGGCGGAGTGGCGGCTGTGGAGACGAAAACGGCGGTGCATTTGTCGAAAGTCGAGAGAGATTGTAGAATTTGCCACCTGAGTTTAGATGGGTCGAACCCTGAATCTGGTTTCCCAATTGAGTTGGGATGTTCTTGTAAAGAAGATTTAGCTGCTGCCCATAAACACTGCGCTGAAGCTTGGTTCAAAATTAGGGGTAACAAAACCTGCGAGATATGTGGTTCAACAGCTCGCAATGTGGTAGGTGTAAATGAAGTAGAGCTAATGGAGCAATGGAATGAGGCTAACGATCCTGCGCCCACGGTTGCTCCACCCCATCAACCTGAGACTCGGCATTTCTGGCAAGGGCATAGGTTTCTGAATTTCCTGCTGGCCTGTATGGTCTTTGCCTTTGTCATCTCTTGGCTCTTTCACTTCAATGTCCCTTCTTAA

Protein sequence

MSTIMPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVGSGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVELMEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo15198	Spo15198	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo15198.1	Spo15198.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15198.1.exon.1	Spo15198.1.exon.1	exon
Spo15198.1.exon.2	Spo15198.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15198.1.utr5p.1	Spo15198.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15198.1.CDS.1	Spo15198.1.CDS.1	CDS
Spo15198.1.CDS.2	Spo15198.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15198.1.utr3p.1	Spo15198.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo15198.1 vs. NCBI nr
Match: gi|902240120|gb|KNA25888.1| (hypothetical protein SOVF_002260 [Spinacia oleracea])

HSP 1 Score: 479.6 bits (1233), Expect = 3.300e-132
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1

		  
Query: 5   MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG 64
           MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG
Sbjct: 1   MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG 60

Query: 65  SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRICHLS 124
           SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVE DCRICHLS
Sbjct: 61  SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVETDCRICHLS 120

Query: 125 LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL 184
           LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL
Sbjct: 121 LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL 180

Query: 185 MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 240
           MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 235

[Close]

BLAST of Spo15198.1 vs. NCBI nr
Match: gi|731315219|ref|XP_010690418.1| (PREDICTED: uncharacterized protein LOC104903962 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 320.9 bits (821), Expect = 1.900e-84
Identity = 174/243 (71.60%), Postives = 185/243 (76.13%), Query Frame = 1

		  
Query: 1   MSTIMPT---HVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVG 60
           MST++ T   HV+DIEQ + RR S   V +  DEESV CSD E+        E CTRVV 
Sbjct: 1   MSTLITTQQHHVIDIEQELPRRSSGE-VSDDDDEESVCCSDEEN--------ERCTRVVT 60

Query: 61  GVGENVGSGRL-TEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVER 120
             G N   G L +EKR   SSS+SCLSE SV    DLER   G    ETK ++HLSKVER
Sbjct: 61  EDGVN---GSLNSEKRSFSSSSTSCLSECSV----DLERENVGAVIGETKISLHLSKVER 120

Query: 121 DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNV 180
           DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNK CEICGSTARNV
Sbjct: 121 DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKICEICGSTARNV 180

Query: 181 VGVNEVELMEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFN 240
           VGV+EVELMEQWNE ND   T  PPH  ETRHFWQGHRFLNFLLACMVFAFVISWLFHFN
Sbjct: 181 VGVSEVELMEQWNETNDATATAPPPHPAETRHFWQGHRFLNFLLACMVFAFVISWLFHFN 227

[Close]

BLAST of Spo15198.1 vs. NCBI nr
Match: gi|976925989|gb|KVI09868.1| (Zinc finger, RING-CH-type [Cynara cardunculus var. scolymus])

HSP 1 Score: 253.1 bits (645), Expect = 5.000e-64
Identity = 144/252 (57.14%), Postives = 167/252 (66.27%), Query Frame = 1

		  
Query: 1   MSTIMPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAE----CCTRVV 60
           M+T+  TH+ D+E G          G+ +  +S+  S G+ SS S+ ++E      T +V
Sbjct: 1   MATLQETHL-DLEAGGGGGGGGG--GDATHRQSIASSAGDGSSRSSDASEESTTATTEIV 60

Query: 61  GGVGENVGSGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAV--ETKTAVHLSKV 120
           G V E                  SC+SEFSV   VDLE GGGG   V  +  + VHLSK+
Sbjct: 61  GVVSEE----------EEDKGRESCVSEFSV---VDLENGGGGGGGVHCDEGSKVHLSKI 120

Query: 121 ERDCRICHLSLDGSNPES--GFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGST 180
           ERDCRICHLSLD +N ES  G PIELGCSCK+DLAAAHKHCAEAWFKI+GNKTCEICGS 
Sbjct: 121 ERDCRICHLSLDLTNQESENGIPIELGCSCKDDLAAAHKHCAEAWFKIKGNKTCEICGSI 180

Query: 181 ARNVVGVNEVELMEQWNEANDPAPTVAP-----PHQPETRHFWQGHRFLNFLLACMVFAF 240
           A NV GVNE ELMEQWNEAND   + A          +TR+FWQGHRFLNFLLACMVFAF
Sbjct: 181 AHNVAGVNEAELMEQWNEANDGISSTATAPGGNTASSDTRNFWQGHRFLNFLLACMVFAF 236

[Close]

BLAST of Spo15198.1 vs. NCBI nr
Match: gi|1009121198|ref|XP_015877331.1| (PREDICTED: uncharacterized protein LOC107413802 [Ziziphus jujuba])

HSP 1 Score: 246.5 bits (628), Expect = 4.700e-62
Identity = 130/192 (67.71%), Postives = 144/192 (75.00%), Query Frame = 1

		  
Query: 58  GVGENVGSGRLTEKRRSPSSSS-------SCLSEFSVEEVVDLERGGGGVAAVETKTAVH 117
           G  +  G  RL E+ RS S S        S +SE SVE  VDLE G       E K  +H
Sbjct: 29  GYSDARGGDRLDEEHRSSSESGTEIVERRSSVSECSVE--VDLECG-----VPEVK--LH 88

Query: 118 LSKVERDCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICG 177
           L+KVERDCRICHL+LD +N ESG PIELGCSCK+DLAAAHKHCAEAWF+I+G+KTCEICG
Sbjct: 89  LAKVERDCRICHLTLDTTNHESGIPIELGCSCKDDLAAAHKHCAEAWFQIKGDKTCEICG 148

Query: 178 STARNVVGVNEVELMEQWNEANDPAP---TVAPPHQPETRHFWQGHRFLNFLLACMVFAF 237
           S A NVVGVNE E+MEQWNEAN+ A    T AP H  ETR+FWQGHRFLNFLLACMVFAF
Sbjct: 149 SVALNVVGVNEAEMMEQWNEANENATRMVTAAPVHPAETRNFWQGHRFLNFLLACMVFAF 208

Query: 238 VISWLFHFNVPS 240
           VISWLFHFNVPS
Sbjct: 209 VISWLFHFNVPS 211

[Close]

BLAST of Spo15198.1 vs. NCBI nr
Match: gi|702473197|ref|XP_010031267.1| (PREDICTED: uncharacterized protein LOC104421121 [Eucalyptus grandis])

HSP 1 Score: 245.4 bits (625), Expect = 1.000e-61
Identity = 139/244 (56.97%), Postives = 156/244 (63.93%), Query Frame = 1

		  
Query: 1   MSTIMPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVG 60
           MS +   HVV++++     C       +SDEE   C   ES S                 
Sbjct: 1   MSNLPKCHVVEVQE-----C------HISDEEQRACCSNESGS----------------- 60

Query: 61  ENVGSGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRI 120
           E  G G  +EK RS S+S   +        VDLE GG  + A       HL+ VERDCRI
Sbjct: 61  EIEGVGAASEKDRSSSASECSVG-------VDLEDGGPEIKA-------HLANVERDCRI 120

Query: 121 CHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVN 180
           CHLSLD +N ESG  IELGCSCK+DLAAAHK CAEAWFKI+GNK CEICGSTARNV G N
Sbjct: 121 CHLSLDATNQESGVAIELGCSCKDDLAAAHKLCAEAWFKIKGNKVCEICGSTARNVTGAN 180

Query: 181 EVELMEQWNEAND----PAPTVAPPHQP-ETRHFWQGHRFLNFLLACMVFAFVISWLFHF 240
           E ELMEQWNEA+D    PA T  PP QP ETR+FWQGHRFLNFLLACMVFAFVISWLFHF
Sbjct: 181 EAELMEQWNEASDAATTPAVTAPPPVQPTETRNFWQGHRFLNFLLACMVFAFVISWLFHF 202

[Close]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2F4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002260 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.300e-132
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1

		  
Query: 5   MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG 64
           MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG
Sbjct: 1   MPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVGENVG 60

Query: 65  SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRICHLS 124
           SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVE DCRICHLS
Sbjct: 61  SGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVETDCRICHLS 120

Query: 125 LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL 184
           LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL
Sbjct: 121 LDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVEL 180

Query: 185 MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 240
           MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 MEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 235

[Close]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D285_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024600 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.400e-84
Identity = 174/243 (71.60%), Postives = 185/243 (76.13%), Query Frame = 1

		  
Query: 1   MSTIMPT---HVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVG 60
           MST++ T   HV+DIEQ + RR S   V +  DEESV CSD E+        E CTRVV 
Sbjct: 1   MSTLITTQQHHVIDIEQELPRRSSGE-VSDDDDEESVCCSDEEN--------ERCTRVVT 60

Query: 61  GVGENVGSGRL-TEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVER 120
             G N   G L +EKR   SSS+SCLSE SV    DLER   G    ETK ++HLSKVER
Sbjct: 61  EDGVN---GSLNSEKRSFSSSSTSCLSECSV----DLERENVGAVIGETKISLHLSKVER 120

Query: 121 DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNV 180
           DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNK CEICGSTARNV
Sbjct: 121 DCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKICEICGSTARNV 180

Query: 181 VGVNEVELMEQWNEANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFN 240
           VGV+EVELMEQWNE ND   T  PPH  ETRHFWQGHRFLNFLLACMVFAFVISWLFHFN
Sbjct: 181 VGVSEVELMEQWNETNDATATAPPPHPAETRHFWQGHRFLNFLLACMVFAFVISWLFHFN 227

[Close]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Match: A0A118K5Z9_CYNCS (Zinc finger, RING-CH-type OS=Cynara cardunculus var. scolymus GN=Ccrd_011721 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.500e-64
Identity = 144/252 (57.14%), Postives = 167/252 (66.27%), Query Frame = 1

		  
Query: 1   MSTIMPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAE----CCTRVV 60
           M+T+  TH+ D+E G          G+ +  +S+  S G+ SS S+ ++E      T +V
Sbjct: 1   MATLQETHL-DLEAGGGGGGGGG--GDATHRQSIASSAGDGSSRSSDASEESTTATTEIV 60

Query: 61  GGVGENVGSGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAV--ETKTAVHLSKV 120
           G V E                  SC+SEFSV   VDLE GGGG   V  +  + VHLSK+
Sbjct: 61  GVVSEE----------EEDKGRESCVSEFSV---VDLENGGGGGGGVHCDEGSKVHLSKI 120

Query: 121 ERDCRICHLSLDGSNPES--GFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGST 180
           ERDCRICHLSLD +N ES  G PIELGCSCK+DLAAAHKHCAEAWFKI+GNKTCEICGS 
Sbjct: 121 ERDCRICHLSLDLTNQESENGIPIELGCSCKDDLAAAHKHCAEAWFKIKGNKTCEICGSI 180

Query: 181 ARNVVGVNEVELMEQWNEANDPAPTVAP-----PHQPETRHFWQGHRFLNFLLACMVFAF 240
           A NV GVNE ELMEQWNEAND   + A          +TR+FWQGHRFLNFLLACMVFAF
Sbjct: 181 AHNVAGVNEAELMEQWNEANDGISSTATAPGGNTASSDTRNFWQGHRFLNFLLACMVFAF 236

[Close]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Match: A0A059AAY9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00254 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.200e-62
Identity = 139/244 (56.97%), Postives = 156/244 (63.93%), Query Frame = 1

		  
Query: 1   MSTIMPTHVVDIEQGISRRCSNTTVGEVSDEESVRCSDGESSSSSNSSAECCTRVVGGVG 60
           MS +   HVV++++     C       +SDEE   C   ES S                 
Sbjct: 1   MSNLPKCHVVEVQE-----C------HISDEEQRACCSNESGS----------------- 60

Query: 61  ENVGSGRLTEKRRSPSSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRI 120
           E  G G  +EK RS S+S   +        VDLE GG  + A       HL+ VERDCRI
Sbjct: 61  EIEGVGAASEKDRSSSASECSVG-------VDLEDGGPEIKA-------HLANVERDCRI 120

Query: 121 CHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVN 180
           CHLSLD +N ESG  IELGCSCK+DLAAAHK CAEAWFKI+GNK CEICGSTARNV G N
Sbjct: 121 CHLSLDATNQESGVAIELGCSCKDDLAAAHKLCAEAWFKIKGNKVCEICGSTARNVTGAN 180

Query: 181 EVELMEQWNEAND----PAPTVAPPHQP-ETRHFWQGHRFLNFLLACMVFAFVISWLFHF 240
           E ELMEQWNEA+D    PA T  PP QP ETR+FWQGHRFLNFLLACMVFAFVISWLFHF
Sbjct: 181 EAELMEQWNEASDAATTPAVTAPPPVQPTETRNFWQGHRFLNFLLACMVFAFVISWLFHF 202

[Close]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Match: W9S3U5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005857 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.600e-61
Identity = 127/192 (66.15%), Postives = 138/192 (71.88%), Query Frame = 1

		  
Query: 55  VVGGVGENVGSGRLTEKRRSPSSS----SSCLSEFSVEEVVDLERGGGGVAAVETKTAVH 114
           V GG GE        E+R S  +      S +SE SVE  VDL            +  VH
Sbjct: 30  VAGGGGERSSDEEEEERRCSSGAEIVEKGSPVSERSVE--VDL-----------AEVKVH 89

Query: 115 LSKVERDCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICG 174
           L+KVERDCRICHLSLD +N ESG PIELGCSCK+DLAAAHK CAEAWFKI+GNKTCEICG
Sbjct: 90  LAKVERDCRICHLSLDAANHESGIPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICG 149

Query: 175 STARNVVGVNEVELMEQWNEAND---PAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAF 234
           STA NV GVNE E+MEQWNE+ND     P  AP H  ETR+FWQGHRFLNFLLACMVFAF
Sbjct: 150 STAHNVSGVNEAEVMEQWNESNDNGATTPATAPVHPAETRNFWQGHRFLNFLLACMVFAF 208

Query: 235 VISWLFHFNVPS 240
           VISWLFHFNVPS
Sbjct: 210 VISWLFHFNVPS 208

[Close]

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 9.400e-53
Identity = 116/198 (58.59%), Postives = 126/198 (63.64%), Query Frame = 1

		  
Query: 46  NSSAECCTRVVGGVGENVGSGRLTEKRRSPSSSSSCLSEFSVEEV-VDLERGGGGVAAVE 105
           NSS+ C      G GE   S    EK           S  SV  V +DLE G        
Sbjct: 18  NSSSGC-----DGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELG-------L 77

Query: 106 TKTAVHLSKVERDCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNK 165
            +  VHLS+ ERDCRICH+SLD +N ESG PIELGCSCK DLAAAHKHCAE WFKI+GNK
Sbjct: 78  PEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNK 137

Query: 166 TCEICGSTARNVVGVNEVELMEQWNEAN---DPAPTVAPPHQPETRHFWQGHRFLNFLLA 225
            CE+CGS A NVVG  EVE  E  NEAN   +     + P   E R FWQGHRFLNFLLA
Sbjct: 138 ICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLA 197

Query: 226 CMVFAFVISWLFHFNVPS 240
           CMVFAFVISWLFHFNVPS
Sbjct: 198 CMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.800e-35
Identity = 79/170 (46.47%), Postives = 99/170 (58.24%), Query Frame = 1

		  
Query: 76  SSSSSCLSEFSVEEVVDLERGGGGVAAVETKTAVHLSKVERDCRICHLSLDGSNPESGFP 135
           S+  S   EF + + +D E     VA+   +        E+DCRICHL L+ S  E G P
Sbjct: 41  SAVRSFCGEFEIADDLDDETDTESVASGSIR-----GSPEKDCRICHLGLESSRHECGDP 100

Query: 136 IELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTARNV------VGVNEVELMEQWN 195
           + LGCSCK+DL   HK CA+ WFKI+GNKTCEIC S A+N       +G   VE      
Sbjct: 101 MVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDV 160

Query: 196 EANDPAPTVAPPHQPETRHFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 240
           EA +  PT+      + R   +G+RFLNFLL CMV AFVISW FHFN+PS
Sbjct: 161 EAGN-TPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 9.100e-32
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1

		  
Query: 115 ERDCRICHLSLDGSNPESGFPIELGCSCKEDLAAAHKHCAEAWFKIRGNKTCEICGSTAR 174
           E+DCRICHL ++ S    G  IELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC S AR
Sbjct: 81  EKDCRICHLGVETSG---GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 175 NVVGVNEV--ELMEQWNEANDPAPTVAPPHQPET--RHFWQGHRFLNFLLACMVFAFVIS 234
           NV G NE+    ME+  E  +   T A      T   + WQ  R +N +LACMVF F IS
Sbjct: 141 NVGGANEMVGSTMEE-RELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMVFGFFIS 200

Query: 235 WLFHFNVPS 240
           W+FHF+V S
Sbjct: 201 WIFHFHVSS 205

[Close]

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 8.000e-28
Identity = 68/154 (44.16%), Postives = 78/154 (50.65%), Query Frame = 1

		  
Query: 116 RDCRICHLSLDGSNPES--------------------------------GFPIELGCSCK 175
           RDCRICHL L+ +N E+                                G P++LGCSCK
Sbjct: 79  RDCRICHLPLE-TNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCK 138

Query: 176 EDLAAAHKHCAEAWFKIRGNKTCEICGSTARNVVGVNEVELMEQWNEANDPAPTVAPPHQ 235
            DL  AH  CAE WFKI+GN TCEICG+ A NV G  E    E     +  A       Q
Sbjct: 139 GDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG--EQSNPESTASTHSQAAAGQSLTQ 198

Query: 236 PETRHFWQGHRFLNFLLACMVFAFVISWLFHFNV 238
            E R  W G   +NFLLA MVFAFV+SWLFHF V
Sbjct: 199 TEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 8.000e-20
Identity = 46/86 (53.49%), Postives = 51/86 (59.30%), Query Frame = 1

		  
Query: 115 ERDCRICHLSLDGSNPESGFP-------IELGCSCKEDLAAAHKHCAEAWFKIRGNKTCE 174
           ER CRICH   D S   SG         IE+GC CK +L  AH HCAEAWFK+RGN  CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 175 ICGSTARNVVGVNEVELMEQWNEAND 194
           ICG TA+NV     V LME W+   D
Sbjct: 159 ICGCTAKNVT----VRLMEDWSGERD 180

The following BLAST results are available for this feature:

BLAST of Spo15198.1 vs. NCBI nr
BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
BLAST of Spo15198.1 vs. ExPASy Swiss-Prot
BLAST of Spo15198.1 vs. TAIR (Arabidopsis)

BLAST of Spo15198.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902240120\|gb\|KNA25888.1\|	3.3e-132	99.5	hypothetical protein SOVF_0022...	[more]
gi\|731315219\|ref\|XP_010690418.1\|	1.9e-84	71.6	PREDICTED: uncharacterized pro...	[more]
gi\|976925989\|gb\|KVI09868.1\|	5.0e-64	57.1	Zinc finger, RING-CH-type [Cyn...	[more]
gi\|1009121198\|ref\|XP_015877331.1\|	4.7e-62	67.7	PREDICTED: uncharacterized pro...	[more]
gi\|702473197\|ref\|XP_010031267.1\|	1.0e-61	56.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo15198.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9S2F4_SPIOL	2.3e-132	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8D285_BETVU	1.4e-84	71.6	Uncharacterized protein OS=Bet...	[more]
A0A118K5Z9_CYNCS	3.5e-64	57.1	Zinc finger, RING-CH-type OS=C...	[more]
A0A059AAY9_EUCGR	7.2e-62	56.9	Uncharacterized protein OS=Euc...	[more]
W9S3U5_9ROSA	1.6e-61	66.1	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo15198.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo15198.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT5G05830.1	9.4e-53	58.5	RING/FYVE/PHD zinc finger supe...	[more]
AT5G01070.2	1.8e-35	46.4	RING/FYVE/PHD zinc finger supe...	[more]
AT2G37950.1	9.1e-32	54.2	RING/FYVE/PHD zinc finger supe...	[more]
AT5G59000.1	8.0e-28	44.1	RING/FYVE/PHD zinc finger supe...	[more]
AT2G34200.1	8.0e-20	53.4	RING/FYVE/PHD zinc finger supe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 118..169 score: 2.
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 117..170 score: 4.4
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 110..176 score: 18
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 114..171 score: 9.0
None	No IPR available	PANTHER	PTHR23012:SF87	RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN	coord: 11..41 score: 2.5E-95coord: 70..239 score: 2.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 115..173 score: 1.41

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding