Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAACCATGAACCAACACGAGTCGACGAAGTGCCACTCGGGTGGCAAAGTCTCTGTAGATATCTCTGATCATGCAGAGAATCTGCTGGAGAGAGGTTGCAAGGAGTATGGGTATGTGATATGTTCATTATTTCACTCAGGTGTCCGTTTTTAATCTTTTCACTATACAGCCATTACAACTTTAATTCTCATGCCAGATGTCAGCATTACCGACGAAGATGTCGAATTAGAGCACCATGCTGTAACGAGATATTTGATTGTCGCCATTGTCATAATGAAGCAATGGTAAGTCTCCTAACAACTATGAACCTATGATGCTAGGTTTGGATATGTGTGGGTTTTGGTAGTCAATTTATGTCCAGGTAGAATTAGTATATTTGAGTTATGCATTTTATATGTTATAACTTCACCCTGAAGTCCTGAACTCGTCCTGGGAGCTCCTGACATGTTTGTGTGCTGGCATACACCTACAATGCCTGTTTGACCATCATTTAAGTGATGATTCTCTTCATTTCAACAATGTATTAAATTGGTGAATGATATTTCGTGAATGGTACTTGTGCTGAAGTAATTAATTAGAGTTTGTTGTTTTACCATTTACATTGACAGAAATCTTTGTAGCATGATACCGGTGATCCTTGCTTTACTGCTTGCATTCCTTGTTTGTGTTGAACTATTGATTGTGACTTGAGTGCTAGGCAGGATATAGGACCTCTAATGAGTTTTAGCCCTTATAGGAATCTCTTTACTTTTGGGTGGAAGGTGTTTTGGGAATTGCTGACCAAGGCAGAGGTCTTTGTGATTTTAGAGAAAACATTTTGTTTCCTCTGGTAGGGAGTTTTCATCATGATATGTACAGCCCATTTGGTAGGCGGTAATAAATGGTGGAAGTGCAACTTCATCTCAAAAATATGTTTTTCTTGCCATTGCAGATAGATTCTTGTAATTTTGTAAGCAAAAAATCCTTGTCATCGTACATGGTAATGGAACTTCGTCTCAGACATGTGTTCTTCATAAATTTTCATTATCTCTTAATAAAGTAGTTGGATGACAATGGAAATTTATGAAGAAAAAGAGAAATTTGGGGGCGGACAAACATTGCCGTGGACATTGGCATGGGACTCTAATTATAAAATTACGTATAAATTTATCATTATTACCACCAATAATCCATCATTTAGTAACATATCAAGCAGGCCGATGAGGTTCATACCTAGATAATATTATAATAAATTAATAAGTACTTGCTATGTCCTGAAAAGAAATTTACAGCTACTTTTGGCTGTTTATTAAGAACCTCCACCTTGCGTTTCTGATTTTTTGGCAATAACTCAAATGTTGTTTTCCCTTTTCTCATCAACCATTAACCCTTTTTCTCTATCCTTCCCTACACTAACTCTTCTTATACAAATACAAACTTCACAAATATTTTAATCGTTGAGGAAAGCTCAAGTGTGAAGTTCTTTTTGGGATGGAAGGAGCTCTGTTTTTCTTATCTGGGTTTATTAAGTCTGAAAGATAGACAATTTTTCATTGTTTTTTGCAACATGAAATTTTCAGGTTTCCTAGCGCTTTCCCTGATCCTGGCACTATATTTTTCTCCATTCTCCTTTGGTTTTTACTTCGATTGTGCTTTATGATTAATATGCAGAACAATATTAAGCTTGAAAAGACAAAGAGGCATGACATTCCACGACTTCAACTTCAGCAGGTAAATCAGTTCTGAAAATTTATGCTCCTTTATTCTATCATGTAACGAGCATATTTATGCTGATATTAGGTGTTACAAGTGTCTGACAGTGTTTCCGCTATGTTGAAAACAGGTGATTTGTTCTCTCTGTGGTACTGAACAAGAGGTATTTCTGGTCTTTAATTTTGGAGTTTGCTGGTCCAACCTGTCAATCTTTATATAGGTTGTTAACATGGAACTTCAATTCAATTCTAACTTTCGTTGGATGATGTCTATCCAGGTTCGGCAAGTGTGCATCAACTGTGGTGTTTGCATGGGAAAATATTTTTGTGAGTTCTGCAAGCTATATGATGATGATGTGAGTAGCTTTTCTTCCTATACCAATCCTCCACAACATATCTTCAATTCCACGGTATTTCAGTTATGAATGGGATAAATACTTTCTTTCCATTCCCATCAAAAGATAATAATAAATATTTGCTTCCAAGTTTCAAGTCAAGCTTAACCCTACAATGACATGATAGGGGGTCGGGGAACGTGAACTGTTATGAAGAGAGTCGCGGCAGGTTTGTGGCTGGCAGCGTAAAATCTTAGTCGCATGACTCACATCCTATGGACATGAGTCAAGCTGAACCGTCCGACCAAGAATTGCAATATGTTCAAATTCAACAAATGAAGCTGGATATTGGCGTGCCATAAGGGGTTTTTGTACTGTTAATAGGAACCAAAAGGAACTGAATGATGATTTGAAGTTATGGATTCTGCTTAATTAATAGAAAATTAGAAACTATGATTGTGTAGATCACTTGGCACAATAGCCTTGTAATGTCTTGCCATAACACATGGTTTCGATGTTTCTGCAGATATCTAAGAAGCAGTACCACTGTGAGGGATGTGGAATCTGCAGGTATGACATAGTGGATGTTGAATCATTTCGTGGGAATTTCATCCTAACTTAACTTGTTCCCGTTTCGTAGTTGAAATGTCTCACATGTCAGTCTCTTATGATGGAAAATTTGTAATGATTATTTCAAATATTGTGACATTAGCCATTAGGAGCATATATCTAATGCTTTTGCCCTATTGTGTTGATTTTTATGTGCTGTGATGATCGTCTCGTGTAAACTTAATTACAAATTTTGACTTGTTACAGAATTGGAGGACGTGAAAATTTCTTCCACTGTTACAAATGCGGTTGTTGCTACTCCATGGTCCTGAAAAATAGCCATCCTTGTGTAGAAGGGGCAATGCATCATGACTGTCCCGTATGCTTTGAGGTATGGACTGCATTTTTTATGGTATGGAGCCATTTGCAATGTAAGCAACTTGAGAAGCTAATAATTTGTTTCTGTTTCCAGTTTCTGTTCGAGTCCAGAAATGACGTCACAGTATTGCCATGTGGACACACGATCCACAAAAACTGCTTGAAGGAAATGCAGGAGCACTACCAGTGAGTGTTTTTGACTGCGTTGCTACGTATTTTCATTAATTGCAGTTTCTATGGAAATATGGAATGGGCTGTTAATGGACCATTGTATGATCTCATGTTGCAGGTATGCTTGCCCCCTATGCTCAAAATCAGTTTGTGACATGTCTAAGGTATGGGAGATATTTGACATGGAAATTGCTGCAACACCAATGCCAGAGCCTTACCAGAGCAAGATGGTCAGTAATATTCTGAGCTTGCCATCTCAAATTGTGACTACTGGTCCTATTTTTTGAAACTAAAGTCGTCCCGCGTATAGTACAAACTGATATTCTTAAAGGGGGAAAGAGAGCATTAATCGTTATCTTTTAAGCGCAGGTCTCTATCCTTTGCAACGACTGCGGGTCAAAATCTTGCGTCCAGTACCATGTGTTGGCTCAAAAATGCCCCAACTGCAGATCTTACAACACTCGCCAATTAGGTTGAAATGTAGCTTTATTTCAGGAGCTAAGATACGTGCTTTTGCGCTTTAACCATACCCACACGTAGCTAGTTGCATCAGAAATGAAGCTCCTCAACTTCCATGTCTAGGCTATTCTTGGGTCGCTGCAACTTTCATCTTCCATTATTATTACAGGTCTTTTCTTCAATTTCTTTTAGCAGAATCCTATGTTTAGTTTAAGTTTAGTTTGATAGTCATTCCCTTCAAGTTTACCAAGATGTATCTTCTTTTGTGTTTTGAAGTAGAGCTCCAGGTTACCTGTAGAGCTCATTAAACTTTGATTTGTCGTTGATTACCTCTCATTCGATAATTTTAATTATTCAACCTAGAGAAATTGTGTCAATAAGATTGGGGTCTACTTTATCTTGTACAAGTAAACAGAACCAAAAAAAACACCACTTGCTGCTCTTTTTCACCAGCACCTCTCATGAGTTCAAGGAGGTTCTGGAGAAAGGTTAGCTCAATCGCCGAGAAGTTTGCTAATATAATGACAATGCGACTATATGGTCGCTTGCTTATGAG ATGGAAGCAACCATGAACCAACACGAGTCGACGAAGTGCCACTCGGGTGGCAAAGTCTCTGTAGATATCTCTGATCATGCAGAGAATCTGCTGGAGAGAGGTTGCAAGGAGTATGGATGTCAGCATTACCGACGAAGATGTCGAATTAGAGCACCATGCTGTAACGAGATATTTGATTGTCGCCATTGTCATAATGAAGCAATGAACAATATTAAGCTTGAAAAGACAAAGAGGCATGACATTCCACGACTTCAACTTCAGCAGGTGATTTGTTCTCTCTGTGGTACTGAACAAGAGGTTCGGCAAGTGTGCATCAACTGTGGTGTTTGCATGGGAAAATATTTTTGTGAGTTCTGCAAGCTATATGATGATGATATATCTAAGAAGCAGTACCACTGTGAGGGATGTGGAATCTGCAGAATTGGAGGACGTGAAAATTTCTTCCACTGTTACAAATGCGGTTGTTGCTACTCCATGGTCCTGAAAAATAGCCATCCTTGTGTAGAAGGGGCAATGCATCATGACTGTCCCGTATGCTTTGAGTTTCTGTTCGAGTCCAGAAATGACGTCACAGTATTGCCATGTGGACACACGATCCACAAAAACTGCTTGAAGGAAATGCAGGAGCACTACCAGTATGCTTGCCCCCTATGCTCAAAATCAGTTTGTGACATGTCTAAGGTATGGGAGATATTTGACATGGAAATTGCTGCAACACCAATGCCAGAGCCTTACCAGAGCAAGATGGTCTCTATCCTTTGCAACGACTGCGGGTCAAAATCTTGCGTCCAGTACCATGTGTTGGCTCAAAAATGCCCCAACTGCAGATCTTACAACACTCGCCAATTAGGTTGAAATGTAGCTTTATTTCAGGAGCTAAGATACGTGCTTTTGCGCTTTAACCATACCCACACGTAGCTAGTTGCATCAGAAATGAAGCTCCTCAACTTCCATGTCTAGGCTATTCTTGGGTCGCTGCAACTTTCATCTTCCATTATTATTACAGGTCTTTTCTTCAATTTCTTTTAGCAGAATCCTATGTTTAGTTTAAGTTTAGTTTGATAGTCATTCCCTTCAAGTTTACCAAGATGTATCTTCTTTTGTGTTTTGAAGTAGAGCTCCAGGTTACCTGTAGAGCTCATTAAACTTTGATTTGTCGTTGATTACCTCTCATTCGATAATTTTAATTATTCAACCTAGAGAAATTGTGTCAATAAGATTGGGGTCTACTTTATCTTGTACAAGTAAACAGAACCAAAAAAAACACCACTTGCTGCTCTTTTTCACCAGCACCTCTCATGAGTTCAAGGAGGTTCTGGAGAAAGGTTAGCTCAATCGCCGAGAAGTTTGCTAATATAATGACAATGCGACTATATGGTCGCTTGCTTATGAG ATGGAAGCAACCATGAACCAACACGAGTCGACGAAGTGCCACTCGGGTGGCAAAGTCTCTGTAGATATCTCTGATCATGCAGAGAATCTGCTGGAGAGAGGTTGCAAGGAGTATGGATGTCAGCATTACCGACGAAGATGTCGAATTAGAGCACCATGCTGTAACGAGATATTTGATTGTCGCCATTGTCATAATGAAGCAATGAACAATATTAAGCTTGAAAAGACAAAGAGGCATGACATTCCACGACTTCAACTTCAGCAGGTGATTTGTTCTCTCTGTGGTACTGAACAAGAGGTTCGGCAAGTGTGCATCAACTGTGGTGTTTGCATGGGAAAATATTTTTGTGAGTTCTGCAAGCTATATGATGATGATATATCTAAGAAGCAGTACCACTGTGAGGGATGTGGAATCTGCAGAATTGGAGGACGTGAAAATTTCTTCCACTGTTACAAATGCGGTTGTTGCTACTCCATGGTCCTGAAAAATAGCCATCCTTGTGTAGAAGGGGCAATGCATCATGACTGTCCCGTATGCTTTGAGTTTCTGTTCGAGTCCAGAAATGACGTCACAGTATTGCCATGTGGACACACGATCCACAAAAACTGCTTGAAGGAAATGCAGGAGCACTACCAGTATGCTTGCCCCCTATGCTCAAAATCAGTTTGTGACATGTCTAAGGTATGGGAGATATTTGACATGGAAATTGCTGCAACACCAATGCCAGAGCCTTACCAGAGCAAGATGGTCTCTATCCTTTGCAACGACTGCGGGTCAAAATCTTGCGTCCAGTACCATGTGTTGGCTCAAAAATGCCCCAACTGCAGATCTTACAACACTCGCCAATTAGGTTGA MEATMNQHESTKCHSGGKVSVDISDHAENLLERGCKEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNIKLEKTKRHDIPRLQLQQVICSLCGTEQEVRQVCINCGVCMGKYFCEFCKLYDDDISKKQYHCEGCGICRIGGRENFFHCYKCGCCYSMVLKNSHPCVEGAMHHDCPVCFEFLFESRNDVTVLPCGHTIHKNCLKEMQEHYQYACPLCSKSVCDMSKVWEIFDMEIAATPMPEPYQSKMVSILCNDCGSKSCVQYHVLAQKCPNCRSYNTRQLG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo15571.1 vs. NCBI nr
Match: gi|902178606|gb|KNA09184.1| (hypothetical protein SOVF_155740 [Spinacia oleracea]) HSP 1 Score: 626.3 bits (1614), Expect = 2.600e-176 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo15571.1 vs. NCBI nr
Match: gi|731320383|ref|XP_010670776.1| (PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 544.7 bits (1402), Expect = 9.800e-152 Identity = 239/283 (84.45%), Postives = 260/283 (91.87%), Query Frame = 1
BLAST of Spo15571.1 vs. NCBI nr
Match: gi|658002996|ref|XP_008393999.1| (PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Malus domestica]) HSP 1 Score: 498.4 bits (1282), Expect = 8.100e-138 Identity = 213/256 (83.20%), Postives = 237/256 (92.58%), Query Frame = 1
BLAST of Spo15571.1 vs. NCBI nr
Match: gi|1009115354|ref|XP_015874186.1| (PREDICTED: E3 ubiquitin-protein ligase MIEL1 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 496.9 bits (1278), Expect = 2.400e-137 Identity = 217/267 (81.27%), Postives = 239/267 (89.51%), Query Frame = 1
BLAST of Spo15571.1 vs. NCBI nr
Match: gi|694443780|ref|XP_009348444.1| (PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Pyrus x bretschneideri]) HSP 1 Score: 495.7 bits (1275), Expect = 5.200e-137 Identity = 215/263 (81.75%), Postives = 240/263 (91.25%), Query Frame = 1
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPK0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155740 PE=4 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 1.800e-176 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043770 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 6.900e-152 Identity = 239/283 (84.45%), Postives = 260/283 (91.87%), Query Frame = 1
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Match: A5C608_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04480 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 1.800e-136 Identity = 217/276 (78.62%), Postives = 241/276 (87.32%), Query Frame = 1
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Match: A0A067KGZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07809 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 3.100e-136 Identity = 209/253 (82.61%), Postives = 235/253 (92.89%), Query Frame = 1
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Match: M5XSG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009486mg PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 4.000e-136 Identity = 216/265 (81.51%), Postives = 236/265 (89.06%), Query Frame = 1
BLAST of Spo15571.1 vs. ExPASy Swiss-Prot
Match: MIEL1_ARATH (E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana GN=MIEL1 PE=1 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.700e-93 Identity = 143/253 (56.52%), Postives = 185/253 (73.12%), Query Frame = 1
BLAST of Spo15571.1 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.800e-68 Identity = 117/253 (46.25%), Postives = 156/253 (61.66%), Query Frame = 1
BLAST of Spo15571.1 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.400e-67 Identity = 110/246 (44.72%), Postives = 149/246 (60.57%), Query Frame = 1
BLAST of Spo15571.1 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.200e-59 Identity = 102/259 (39.38%), Postives = 152/259 (58.69%), Query Frame = 1
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Match: AT5G25560.2 (CHY-type/CTCHY-type/RING-type Zinc finger protein) HSP 1 Score: 430.6 bits (1106), Expect = 7.300e-121 Identity = 183/224 (81.70%), Postives = 205/224 (91.52%), Query Frame = 1
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Match: AT5G22920.1 (CHY-type/CTCHY-type/RING-type Zinc finger protein) HSP 1 Score: 397.5 bits (1020), Expect = 6.900e-111 Identity = 163/254 (64.17%), Postives = 207/254 (81.50%), Query Frame = 1
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Match: AT5G18650.1 (CHY-type/CTCHY-type/RING-type Zinc finger protein) HSP 1 Score: 343.2 bits (879), Expect = 1.500e-94 Identity = 143/253 (56.52%), Postives = 185/253 (73.12%), Query Frame = 1
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Match: AT3G62970.1 (zinc finger (C3HC4-type RING finger) family protein) HSP 1 Score: 329.3 bits (843), Expect = 2.300e-90 Identity = 135/247 (54.66%), Postives = 184/247 (74.49%), Query Frame = 1
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Match: AT1G74770.1 (zinc ion binding) HSP 1 Score: 219.9 bits (559), Expect = 2.000e-57 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15571.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15571.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15571.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo15571.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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