Spo15819.1 (mRNA) | SpinachBase

Overview


Name	Spo15819.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein-related
Location	chr2 : 28651403 .. 28656465 (-)
Sequence length	1552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTATCTGTCCACATTAACCGTTCAATTTGCAATTTAGAGAGAAAAAAAAGAGTCGGGGTTTAGAGGGAGAAAATATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAGGTTCGTCTTCCGTCTATCTTCCAGATCTAATTCTGTTTTTCGGCTTTCTGTTACATGTTTTCTGAATTTTTTAATTTATTGTCATGTTTAGAATGAAATCTGATTTGGATTATTGTTTCGATTTGTGTAACTTTTGGTGAATTGATTTGTTTAATTTGGTGCGCGAAGTGGTTCTTATTTTGCGAATTAGGGTTTTATTCTTTTAATTTTCGTGTTTTTTCGATTTGTGAATTTCGGAATGATTTGGTGGGAGAAGCCTTGTGATGTACCCGTAAATCCGTAATTCTTTAATTATGCGGGTGTTTATCACAATTCATGCTCATTGCTGCTCATAGAATTATGAAATTTGCATTGCCCCCTTTTATAATATTGGGGCGATTACTGTTTTATATCTGCAATTGTGATTCTTTACTATGAAGATTTTAATTGGTGGGTGTGAAATTACGAGGGATGTGTTAATTTGTTCTTTGTCTTCTCAAATTTGAAACCAGCATGTGTTTGCCAACTATTCGCTTGTTTTTATTTTGTGCTAATGGTAAAGTACAGGAGTTAATGTACGTCAATGTTATTTGTAAACCAACATCTTACTTTCCAGTGCCTAACCAGTAACGAGGATGATGTTGTTATGGTATATGAAGTGCCATCATCAACTAAATATCAACTCCTACAAATATTATTAGGATACCTTATCACCTGTATGACCTGTAAAATTTGCATGCTGAATCTCTAATTAGTTAAGATTGCAAGGTACATATAGTGGAAACGAATTGTCAGGGTTGTATAACTTGGTAGAGGCATGCATCTCTTTGAAATCGCGTCAAACAATTGCATGAATACTATACTATACGACCATCTTTTTTTGCATTTCTTCTAATTATACTCAGGGACATTGGCCTTTGTTATTAATCATTTAGATGGAAGCTAATACTTCGTAATAAACATACGTTTTTAGTCAACATGCCCCTCAAGCAAATCTCAAACAACCAACTCCAATGCCCTAGTCTGATGCATTCTTGTTTGTGATCTTCACTTAGTTGTGCCTTTATGTTGTGGTATTGACCACTGGCCAGAAAATGTCATGTCTTATTTTCACAACTTTTGGTGTTACCTTAGTTATCTGGTTCTGCATTTGTTCATAGTTAGCAACTTAGCATTGAGTAGTTGTTACCTTATAGAAGTGCTGATGTTGTTGTTTTCCACCTTTGGGCTGTCTATCTAACATGGTATGCCATATGTTTGATCTCAAAACGTGGTTTTGCTGCATGTATAATGATGAAGGTGAATAAATTTTTTTATTGCGTGTCACAGCTTCAATTATCGCCTGGTGCAAGAGTGTGGATCTTGAGGAAGGCATATATTGTGTGATACGGGTTTTGAATTGGGTTTTGGGGATTCTTTTCCTTTTTATGGTTTTCGAGGGAAATTCTGAATGGGCAAAATCCCTATAAAAGATGCATTTACATGAGTCGGAAACCTGATTCGTTTTTGGCTTGTTTGGTTACAATTATAAATCAAGGTTCCATCTTGTGGGAGTTGAGGTTAATTTTACAACGGTTTAAAGAGGTCTCCTCCGGAGGATTCACCTTGGATTTTATTGGTAGTTGGATGCTGAAAAGCTTCAAGATGGCCATACTGATTGGATTACGTAAAGATGGAACATGATTTCTGATTAATGGTTGAAGGGGTGGGAGTTTATTCGCAGCACCAGCTTTGGTTATAGGGGCTTTGCTGTGGAACCGGCTGGAAATAAAACTAAATCATGTCCATTATGATGCATACCTTTCTTGGAATGGAATTTTGACAAGATTATTTCTAGGATATTGTTTTTTGTTGCTGCCAAAATTCGTTTGGGAGGTACTATTTAGATGGTTAGCTTTGAGTTAAAGTTTATGGTCAATTTTGAGTTAAATATAGTGTTTGGATGGCAATGGAGTTGGTCAACCAGTTTGTCTTACCAATTGTGCAGAAACCTGTCAGTTTATGTCGATTGAATTCTTGGGTGAACATATTTTGGCAGTAGGTTTCTGGTATGCAACTGCAGGAGAAAGAATATGTGGTTTTTCAGGACAGCCCTGGCTACATAACTCTTTAGTCCATTGCTGAAGATTAAGTTTTATGCAAACTAGTAGAATGGAAATCCTGTTTTGTTGCATGTTTATCTCTACCTGTTAAAACCTGGATAAAGGCCATTTTAGGATAGAGTTCTTGGTTGGGGTTTCAAGATGTTTTTTGTCAAGCAACTGATGGCATATTTATTCTCGAATGAGAGGGACATCTATTTTTGGAATTGAAGATGTTCAGAGGATGATTCTTCAAGTGCTATGGCGAGGGCATCTCTTATTTGCTGTCCATGTCATGTTATGAGAGGGGCATCTGATGCGGGGGGATCAAATATGTTTTTTATCGACGTTGGGGGATGATTTTGTCAGCTCTCCTCAAAGGTCCGTCAAACAACTTTGGTTGACAAACTAAGAGAAAAATATTTCAGAGGAAGTTATTCTAGTATCGGAGAAGGTCAAGGCCAATGGTAGGGATCATTTGTATGGTTTGTTCACTGAACAGTAGTTTTCAGGTTTAAGATCTCATTCGGTCATTAAGTGGTCCCAGCCCCGATTCACTGAAATATCTTGCTTCCACGGGTTCAAGATGCTTATTCTTTAGGTCTTATACTCTTGAATTAGCCTTTTCTCATGATTTTCTTTGGAAGGTTTTTTGAACCAAGCCTTCAGGAGTTTTAGGTTTTGTGCTTTTAGCATTAGTCTCTTTAATCGTAGTTTTCACTGGTCCCGTTGTCTGGAGACAGCTTATTGTGCTAAAGTTCTCTGGTTTACCTCTTTGGTAGAAATCCTATCTTGCGTTCAAAATGATGCTTCAGTTTAGATATTTGTAATTCGCATGTATTCTTGCTTCAGAACGTTTTGGTGATATGGATCATGTTAGACCTGGAACTAATACATTTCCCTGCTGGTATGAGGTTAAAATTGACGGTTCTATTTCTGGATAATAAACATATTATTTAACTCGGGCTGCTTGTTTGAGAAGACTGGGACTGACCATGTCATCTTAGAGTCTTTTGATATACTACTACTGGTCGGAGGCCGTTGATATTACTGTCTCCAACCAAGTGATATGTGGGCTGTGAATCATGATCCATCTGCTAGTTTATATGGACTTTTTAATCTTCTTACCATGATATTAGTCGCAGTTCATTTCAACATCACTAGTGTTGTTTTCTTGTTCTCCTACATACACTTTCACCAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGCGTAAGTGCTTTCAGTTTCTAGTCTTTCTATCCCCAATCCGGGTTTTGCACCTGTCATTTCCCCCCTTTCTTTCAGTTTCCTGTGTGTTGGATCATCAACCATCCATTGCATCGTTTGATGTACTTTTATTTCTTTGTTTTGTGTTATAATCATTCTATTGAGTTGGATGGTTGATATGGTTCAGATCTTATGTTGTATTTTTGAAGCAGTTCTCAGCAACTTACTTTTAATCATCTTTTTGCTGTCTCAGGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAGAATTTAGAAATAGACAAGACTTGGCGCCTTTAGCTGTATTAGCTGTTATAATAGATTCGGTTTCTGGTTTTTGAGTAGAAATTGTGAGATATGAGTCTGTTCCTGTTACCTCTGTTTTACCAGGATCTAGTGTGTGTGGTACAGTTGCAGCTTCATTTTAATAGTTGGGTTTAGTTACTACATTCATCAGCTGCTGCATTCAGATTTTGTTATTTTCATTGAGGTTAAGTTGCTGCATTTGGATGAATACCCAAGTATATTTTGATCGAAGCTGAATATTGTCTATGTGAACATACATGTGAATTACGTGAGTTTCTTAGTTTGTTGTGGACTTGTGGCCTAGCTTGTGACTTCGTGTTGAATTGTTTAAGCCATGGCTAGATCCCCT

mRNA sequence

GTTTGTATCTGTCCACATTAACCGTTCAATTTGCAATTTAGAGAGAAAAAAAAGAGTCGGGGTTTAGAGGGAGAAAATATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGCGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAGAATTTAGAAATAGACAAGACTTGGCGCCTTTAGCTGTATTAGCTGTTATAATAGATTCGGTTTCTGGTTTTTGAGTAGAAATTGTGAGATATGAGTCTGTTCCTGTTACCTCTGTTTTACCAGGATCTAGTGTGTGTGGTACAGTTGCAGCTTCATTTTAATAGTTGGGTTTAGTTACTACATTCATCAGCTGCTGCATTCAGATTTTGTTATTTTCATTGAGGTTAAGTTGCTGCATTTGGATGAATACCCAAGTATATTTTGATCGAAGCTGAATATTGTCTATGTGAACATACATGTGAATTACGTGAGTTTCTTAGTTTGTTGTGGACTTGTGGCCTAGCTTGTGACTTCGTGTTGAATTGTTTAAGCCATGGCTAGATCCCCT

Coding sequence (CDS)

ATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGCGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAG

Protein sequence

MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYERRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNVY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo15819	Spo15819	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo15819.1	Spo15819.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15819.1.utr5p.1	Spo15819.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15819.1.CDS.3	Spo15819.1.CDS.3	CDS
Spo15819.1.CDS.2	Spo15819.1.CDS.2	CDS
Spo15819.1.CDS.1	Spo15819.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15819.1.utr3p.1	Spo15819.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15819.1.exon.3	Spo15819.1.exon.3	exon
Spo15819.1.exon.2	Spo15819.1.exon.2	exon
Spo15819.1.exon.1	Spo15819.1.exon.1	exon

Homology

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BLAST of Spo15819.1 vs. NCBI nr
Match: gi|902231262|gb|KNA22193.1| (hypothetical protein SOVF_035840 [Spinacia oleracea])

HSP 1 Score: 732.6 bits (1890), Expect = 3.200e-208
Identity = 351/361 (97.23%), Postives = 352/361 (97.51%), Query Frame = 1


		  
Query: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTR 60
           MGSRDESAPHQPLLSSLVVRPSDSGGG         GEVRRDAPPYSRPDRYPDEGYRTR
Sbjct: 1   MGSRDESAPHQPLLSSLVVRPSDSGGG---------GEVRRDAPPYSRPDRYPDEGYRTR 60

Query: 61  AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120
           AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR
Sbjct: 61  AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120

Query: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180
           SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK
Sbjct: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180

Query: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240
           RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG
Sbjct: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240

Query: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300
           PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE
Sbjct: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300

Query: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNV 360
           RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGRED+RGVGRDRIGNV
Sbjct: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDRRGVGRDRIGNV 352

Query: 361 Y 362
           Y
Sbjct: 361 Y 352

[Close]

BLAST of Spo15819.1 vs. NCBI nr
Match: gi|731353802|ref|XP_010688247.1| (PREDICTED: transcription initiation factor TFIID subunit 15b [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 682.2 bits (1759), Expect = 5.000e-193
Identity = 334/366 (91.26%), Postives = 344/366 (93.99%), Query Frame = 1


		  
Query: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDE-GYRT 60
           MGSRDESAPHQPLLSSLVVRPSDSGGGGG  SDYEPGEVRRDAPPYSR DRY D+ GYR 
Sbjct: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGG--SDYEPGEVRRDAPPYSRTDRYSDDTGYRA 60

Query: 61  RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG 120
           RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+RGRGG
Sbjct: 61  RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSRGRGG 120

Query: 121 RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNC 180
           R FGRGFDGPG+GPGAVRG+G   MHKNNPNVRPREGDWYCTD ACGNLNFARREYCNNC
Sbjct: 121 RPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREYCNNC 180

Query: 181 KRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDF 240
           KR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDGPRDF
Sbjct: 181 KRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDGPRDF 240

Query: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGY 300
           GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLDRKGY
Sbjct: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLDRKGY 300

Query: 301 ERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRGVGRD 360
           ERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP   RRDPYMERGR+D+RGVGRD
Sbjct: 301 ERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRGVGRD 360

Query: 361 RIGNVY 362
           RIGNVY
Sbjct: 361 RIGNVY 361

[Close]

BLAST of Spo15819.1 vs. NCBI nr
Match: gi|870851057|gb|KMT03123.1| (hypothetical protein BVRB_8g196800 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 592.0 bits (1525), Expect = 6.800e-166
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 1


		  
Query: 56  GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115
           GYR RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+R
Sbjct: 105 GYRARAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSR 164

Query: 116 GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREY 175
           GRGGR FGRGFDGPG+GPGAVRG+G   MHKNNPNVRPREGDWYCTD ACGNLNFARREY
Sbjct: 165 GRGGRPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREY 224

Query: 176 CNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDG 235
           CNNCKR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDG
Sbjct: 225 CNNCKRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDG 284

Query: 236 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLD 295
           PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLD
Sbjct: 285 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLD 344

Query: 296 RKGYERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRG 355
           RKGYERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP   RRDPYMERGR+D+RG
Sbjct: 345 RKGYERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRG 404

Query: 356 VGRDRIGNVY 362
           VGRDRIGNVY
Sbjct: 405 VGRDRIGNVY 411

[Close]

BLAST of Spo15819.1 vs. NCBI nr
Match: gi|743931373|ref|XP_011009952.1| (PREDICTED: polyadenylation factor subunit 2-like [Populus euphratica])

HSP 1 Score: 459.5 bits (1181), Expect = 5.300e-126
Identity = 259/380 (68.16%), Postives = 288/380 (75.79%), Query Frame = 1


		  
Query: 1   MGSRD--ESAPH-QPLLSSLVVRPS-----DSGGGGG--GGSDYEPGEVRRDAPPYSRPD 60
           MGSRD  ++APH QPLLSSLVVRPS     D+ GGGG  GGSDYEPGEVRR+ P YSR D
Sbjct: 1   MGSRDKDQTAPHHQPLLSSLVVRPSVSDGGDAAGGGGRAGGSDYEPGEVRRELPSYSRSD 60

Query: 61  RYPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDF 120
           RY D+ GYR RA SGSPVRRRD DRRYS +  D    PPR R F  GR+     GR+RD 
Sbjct: 61  RYSDDPGYRLRAGSGSPVRRRDADRRYS-SDFDNSGAPPRGRDFSNGRDR----GRFRDS 120

Query: 121 SPPHARGRGG-RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNL 180
           SPP+ARGRGG R  GRGFDGPG GPG +RGEG   M +NNPNVRPREGDW C+D  CGNL
Sbjct: 121 SPPYARGRGGGRPLGRGFDGPGFGPGPLRGEG---MSRNNPNVRPREGDWICSDPLCGNL 180

Query: 181 NFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPP 240
           NFARREYCNNCKRPRY P GSPRR Y GPPPP  PPRRFPGPP+D SPGR  NGYR SPP
Sbjct: 181 NFARREYCNNCKRPRYRPGGSPRRAYPGPPPPHAPPRRFPGPPLDLSPGRTMNGYR-SPP 240

Query: 241 RGWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRD 300
           RGW RDGPRDFGPGG PPPR  GRF DH +RR+R DYPD+++R R KFDRP P +WG +D
Sbjct: 241 RGWSRDGPRDFGPGGPPPPRQGGRFSDHDMRRERSDYPDDEYRGRNKFDRPMPMDWGHKD 300

Query: 301 HARDG-FLDRKGYERRPLSPLAPPP--PPRGRWADRDMRERSRSPMRGGPPP---RRDPY 360
             RDG F +RKG+ERRP SP  P P  P RGRW  RD R+RSRSP+RG PPP   R+D Y
Sbjct: 301 RGRDGLFNERKGFERRPPSPPLPSPSLPQRGRWG-RDGRDRSRSPIRGAPPPKEFRQDMY 360

Query: 361 MERGREDKRGVGRDRIGNVY 362
           MERGR+D+  VGRDR+ +VY
Sbjct: 361 MERGRDDRHPVGRDRMRHVY 370

[Close]

BLAST of Spo15819.1 vs. NCBI nr
Match: gi|802627536|ref|XP_012076726.1| (PREDICTED: basic salivary proline-rich protein 3 [Jatropha curcas])

HSP 1 Score: 457.6 bits (1176), Expect = 2.000e-125
Identity = 259/380 (68.16%), Postives = 284/380 (74.74%), Query Frame = 1


		  
Query: 1   MGSRDE---SAPHQPLLSSLVVRPS-----DSGGGG-GGGSDYEPGEVRRDAPPYSRPDR 60
           MGSRD+   ++ HQPLLSSLVVRPS     D GGGG GGGSDYEPGEVRRD PPYSR +R
Sbjct: 1   MGSRDKDQTTSHHQPLLSSLVVRPSVSDGGDGGGGGRGGGSDYEPGEVRRDPPPYSRQER 60

Query: 61  YPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFS 120
           Y D+ GYR  A SGSP RRRD D RY  +  D    PPR R FG GR+    PGR+RD S
Sbjct: 61  YSDDPGYRIHAGSGSPARRRDADHRYG-SDFDHSGVPPRGREFGSGRD----PGRFRDSS 120

Query: 121 PPHARGR-GGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLN 180
           PP+ARGR GGR  GRGFDGPG GPG+ RGEG     +NNPNVRPREGDW C+D  CGNLN
Sbjct: 121 PPYARGRVGGRPPGRGFDGPGFGPGSFRGEGMSS--RNNPNVRPREGDWICSDPLCGNLN 180

Query: 181 FARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPR 240
           FARREYCNNCKRPRY P GSPRRGY GPPPP  PPRRFPGPP+D SP R  NGYR SPPR
Sbjct: 181 FARREYCNNCKRPRYGPGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPSRNINGYR-SPPR 240

Query: 241 GWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDH 300
           GW RDGPRDFGPG  PPPRH GRF D  +RR R D+PD+D+R R KFDRP P EWG R+ 
Sbjct: 241 GWGRDGPRDFGPGAPPPPRHGGRFSDQEIRRGRPDFPDDDYRGRNKFDRPIPVEWGQRER 300

Query: 301 ARDGFL-DRKGYERR---PLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPP---RRDPY 360
            RD F  DRKG+ERR   P  PLA   P RGRW  RD+RERSRSP+RG PP    RRD Y
Sbjct: 301 GRDNFFNDRKGFERRLPSPPPPLAGQVPQRGRWG-RDVRERSRSPIRGAPPVKDYRRDMY 360

Query: 361 MERGREDKRGVGRDRIGNVY 362
           MERGR+D+RG+GRDRIG+VY
Sbjct: 361 MERGRDDRRGMGRDRIGDVY 371

[Close]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRV3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035840 PE=4 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 2.300e-208
Identity = 351/361 (97.23%), Postives = 352/361 (97.51%), Query Frame = 1


		  
Query: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTR 60
           MGSRDESAPHQPLLSSLVVRPSDSGGG         GEVRRDAPPYSRPDRYPDEGYRTR
Sbjct: 1   MGSRDESAPHQPLLSSLVVRPSDSGGG---------GEVRRDAPPYSRPDRYPDEGYRTR 60

Query: 61  AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120
           AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR
Sbjct: 61  AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120

Query: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180
           SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK
Sbjct: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180

Query: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240
           RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG
Sbjct: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240

Query: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300
           PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE
Sbjct: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300

Query: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNV 360
           RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGRED+RGVGRDRIGNV
Sbjct: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDRRGVGRDRIGNV 352

Query: 361 Y 362
           Y
Sbjct: 361 Y 352

[Close]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196800 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 3.500e-193
Identity = 334/366 (91.26%), Postives = 344/366 (93.99%), Query Frame = 1


		  
Query: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDE-GYRT 60
           MGSRDESAPHQPLLSSLVVRPSDSGGGGG  SDYEPGEVRRDAPPYSR DRY D+ GYR 
Sbjct: 1   MGSRDESAPHQPLLSSLVVRPSDSGGGGG--SDYEPGEVRRDAPPYSRTDRYSDDTGYRA 60

Query: 61  RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG 120
           RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+RGRGG
Sbjct: 61  RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSRGRGG 120

Query: 121 RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNC 180
           R FGRGFDGPG+GPGAVRG+G   MHKNNPNVRPREGDWYCTD ACGNLNFARREYCNNC
Sbjct: 121 RPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREYCNNC 180

Query: 181 KRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDF 240
           KR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDGPRDF
Sbjct: 181 KRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDGPRDF 240

Query: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGY 300
           GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLDRKGY
Sbjct: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLDRKGY 300

Query: 301 ERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRGVGRD 360
           ERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP   RRDPYMERGR+D+RGVGRD
Sbjct: 301 ERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRGVGRD 360

Query: 361 RIGNVY 362
           RIGNVY
Sbjct: 361 RIGNVY 361

[Close]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTA0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196800 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 4.800e-166
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 1


		  
Query: 56  GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115
           GYR RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+R
Sbjct: 105 GYRARAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSR 164

Query: 116 GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREY 175
           GRGGR FGRGFDGPG+GPGAVRG+G   MHKNNPNVRPREGDWYCTD ACGNLNFARREY
Sbjct: 165 GRGGRPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREY 224

Query: 176 CNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDG 235
           CNNCKR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDG
Sbjct: 225 CNNCKRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDG 284

Query: 236 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLD 295
           PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLD
Sbjct: 285 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLD 344

Query: 296 RKGYERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRG 355
           RKGYERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP   RRDPYMERGR+D+RG
Sbjct: 345 RKGYERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRG 404

Query: 356 VGRDRIGNVY 362
           VGRDRIGNVY
Sbjct: 405 VGRDRIGNVY 411

[Close]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match: A0A061GLL6_THECC (RNA-binding protein-related OS=Theobroma cacao GN=TCM_037850 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.100e-125
Identity = 260/383 (67.89%), Postives = 286/383 (74.67%), Query Frame = 1


		  
Query: 1   MGSRDES---APHQPLLSSLVVRPS-----DSGGGGGGG----SDYEPGEVRRDAPPYSR 60
           MGSRD+    + HQPLLSSLVVRPS     D GGGGGGG    SDYEPGEVRR+ PPYSR
Sbjct: 1   MGSRDKDQKLSHHQPLLSSLVVRPSASDGADGGGGGGGGRGGGSDYEPGEVRREPPPYSR 60

Query: 61  PDRYPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYR 120
            DRY DE GYR RA S SPVRRRD D RY  +  DR  GP R R FG GR+    PGRYR
Sbjct: 61  SDRYNDEPGYRIRAGSSSPVRRRDADHRYG-SNFDRSGGPSRSRDFGNGRD----PGRYR 120

Query: 121 DFSPPHARGRGG-RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACG 180
           D SPP+ RG GG R  GRGFDGPG+GPG  RGEG   M +NNPNVRPREGDW C D  C 
Sbjct: 121 DSSPPYNRGPGGGRPLGRGFDGPGYGPGPFRGEG---MTRNNPNVRPREGDWVCPDPLCR 180

Query: 181 NLNFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRS-PGRFGNGYRS 240
           NLNFARREYCNNC+R RYAP GSPR GY GPPP   PPRRFPG PMD S PGR  NG+R 
Sbjct: 181 NLNFARREYCNNCRRFRYAPVGSPRGGYPGPPPSHAPPRRFPGSPMDLSPPGRNMNGFR- 240

Query: 241 SPPRGWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWG 300
           SPPRGW R+GPR+FG GG PPPRHEGRF DH +RRDRLD+ D+D+R R +FDRP P +WG
Sbjct: 241 SPPRGWAREGPREFGAGGPPPPRHEGRFSDHSMRRDRLDFLDDDYRGRNRFDRPMPMDWG 300

Query: 301 PRDHARDGFL-DRKGYERRPLSPLAPPP--PPRGRWADRDMRERSRSPMRGGPPP---RR 360
            RD  R+ F  +RKGYERRP SP  PPP  PPRGRW  RD+RERSRSP+RG PPP   RR
Sbjct: 301 HRDRGRENFFNERKGYERRPPSPPPPPPQLPPRGRW-PRDVRERSRSPVRGAPPPKEYRR 360

Query: 361 DPYMERGREDKRGVGRDRIGNVY 362
           D Y+ERGRED+RGVGRDR+G+ Y
Sbjct: 361 DMYLERGREDRRGVGRDRMGDAY 373

[Close]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match: W9S109_9ROSA (TATA-binding protein-associated factor 2N OS=Morus notabilis GN=L484_001933 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.900e-123
Identity = 250/374 (66.84%), Postives = 280/374 (74.87%), Query Frame = 1


		  
Query: 4   RDESAPHQPLLSSLVVRPSDSGGGGGGG-----SDYEPGEVRRDAPPYSRPDRYP-DEGY 63
           +D++ PHQPLLSSLVVRPS S GGGGGG     SDYE GEVRR+ P YSR DRY  D GY
Sbjct: 6   KDQTTPHQPLLSSLVVRPSTSDGGGGGGGGGRASDYEAGEVRREPPSYSRSDRYSGDSGY 65

Query: 64  RTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGR 123
           R RA S SPVRRRD D RY+ +  D L    R R  G  R+     GR+RD+SPP+ARGR
Sbjct: 66  RLRAGSTSPVRRRDSDHRYN-SDFDHLRSLARSREVGAARD----AGRFRDYSPPYARGR 125

Query: 124 G-GRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYC 183
           G GR FGRG DGP  GPG  RGEG   M +NNPNVRPREGDWYC D  CGNLNFARR+ C
Sbjct: 126 GSGRPFGRGPDGPDFGPGLFRGEG---MSRNNPNVRPREGDWYCPDPLCGNLNFARRDSC 185

Query: 184 NNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGP 243
           NNCKR RY P GSPRRGY GPP P  PPRRFPGPP+D SPGR  NGYR SPPR W RDGP
Sbjct: 186 NNCKRSRYGPVGSPRRGYPGPPLPDVPPRRFPGPPLDHSPGRTMNGYR-SPPRPWVRDGP 245

Query: 244 RDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFL- 303
           ++FG GG PPPRH+GR+PDHH+RRDRLDYPD+ +R R KFDRP P +WG RD  R+ F+ 
Sbjct: 246 KEFGAGGLPPPRHDGRYPDHHMRRDRLDYPDDHYRGRAKFDRPMPLDWGHRDRGRESFIN 305

Query: 304 DRKGYERRPLSPLAPP----PPPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGRE 362
           DRK +ERRP SPL PP    PP RGRWA RD+RERSRSP+R GPPP   RRD Y+ERGR+
Sbjct: 306 DRKPFERRPPSPLPPPPVPLPPNRGRWA-RDVRERSRSPLRRGPPPKDYRRDVYVERGRD 365

[Close]

BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Match: EWS_HUMAN (RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.200e-6
Identity = 66/177 (37.29%), Postives = 72/177 (40.68%), Query Frame = 1


		  
Query: 87  PPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGRSFGRGFDGPGHGPGAVRGEGNQGMHK 146
           PP  RG  GG              P    G  GR  GRG D  G  P   RG  ++G   
Sbjct: 467 PPPLRGGPGG--------------PGGPGGPMGRMGGRGGDRGGFPPRGPRG--SRGNPS 526

Query: 147 NNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPR--------YAPPGSPRRGYAGPP 206
              NV+ R GDW C +  CGN NFA R  CN CK P+        + PPG   RG  GP 
Sbjct: 527 GGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGD-RGRGGP- 586

Query: 207 PPMGPPRRFPGPPMDR-SPGRFGNGYRSSP------PRGWPR---DGPRDFGPGGPP 246
              G  R   G  MDR  PG    G R          RG  R    G R  GPGGPP
Sbjct: 587 ---GGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPP 622

[Close]

BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Match: EWS_MOUSE (RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.300e-6
Identity = 68/186 (36.56%), Postives = 75/186 (40.32%), Query Frame = 1


		  
Query: 87  PPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG---------RSFGRGFDGPGHGPGAVR 146
           PP +   GG       P   R   PP   G GG         R  GRG D  G  P   R
Sbjct: 448 PPMNSMRGG-----MPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPR 507

Query: 147 GEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPR--------YAPPGS 206
           G  ++G      NV+ R GDW C +  CGN NFA R  CN CK P+        + PPG 
Sbjct: 508 G--SRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGG 567

Query: 207 PRRGYAGPPPPMGPPRRFPGPPMDR-SPGRFGNGYRSSP------PRGWPR---DGPRDF 246
             RG  GP    G  R   G  MDR  PG    G R          RG  R    G R  
Sbjct: 568 D-RGRGGP----GGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRG 621

[Close]

BLAST of Spo15819.1 vs. TAIR (Arabidopsis)
Match: AT4G28990.2 (RNA-binding protein-related)

HSP 1 Score: 170.6 bits (431), Expect = 1.700e-42
Identity = 145/331 (43.81%), Postives = 170/331 (51.36%), Query Frame = 1


		  
Query: 56  GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115
           G+RTRA S SP RR   D ++  + ++    PPR R     RE   +PGR+RD+SPP AR
Sbjct: 112 GHRTRASSSSPGRRGYEDHKHG-SDLNHSGVPPRGRELSSRRE---APGRHRDYSPPLAR 171

Query: 116 -GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNN-PNVRPREGDWYCTDAACGNLNFARR 175
            G G R + RG DGP          G  GM +NN   V+PREGDWYC D  C NLNFARR
Sbjct: 172 GGAGARPYRRGLDGP------EPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARR 231

Query: 176 EYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPR 235
           E C  CKR RYAP  S         PP+  PR  P PPM+ SP R  NGYR SPPRGWPR
Sbjct: 232 ESCYKCKRHRYAPANS---------PPL--PRLLP-PPMNHSPRRDFNGYR-SPPRGWPR 291

Query: 236 DGPRDFGPGGPPPRHEGRFPDHHLR-RDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDG 295
           D         PPPRH+   P    R RDR  Y D ++         PP      D A   
Sbjct: 292 D--------YPPPRHD--HPTWRDRERDRPHYSDHEY---------PPSRRIASDWAHTE 351

Query: 296 FLDRKGYERRPLSPLAPPPPPRGRWADRDMRERSRS---------PMRGGPPP------- 355
            L +  Y+RRP  PL+  PP  GRW  R +RERSRS         P+R GPPP       
Sbjct: 352 PLPKPHYDRRP--PLS--PPRGGRWG-RVLRERSRSPPLRDVPPPPLRDGPPPSLRGGGP 395

Query: 356 ------RRDPYMERGREDKRGVGRDRIGNVY 362
                 RRD + +R R D    GR R+GN Y
Sbjct: 412 PLHRDYRRDSHFDRERRDDGRGGRGRMGNSY 395

The following BLAST results are available for this feature:

BLAST of Spo15819.1 vs. NCBI nr
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
BLAST of Spo15819.1 vs. TAIR (Arabidopsis)

BLAST of Spo15819.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902231262\|gb\|KNA22193.1\|	3.2e-208	97.2	hypothetical protein SOVF_0358...	[more]
gi\|731353802\|ref\|XP_010688247.1\|	5.0e-193	91.2	PREDICTED: transcription initi...	[more]
gi\|870851057\|gb\|KMT03123.1\|	6.8e-166	91.6	hypothetical protein BVRB_8g19...	[more]
gi\|743931373\|ref\|XP_011009952.1\|	5.3e-126	68.1	PREDICTED: polyadenylation fac...	[more]
gi\|802627536\|ref\|XP_012076726.1\|	2.0e-125	68.1	PREDICTED: basic salivary prol...	[more]

BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RRV3_SPIOL	2.3e-208	97.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8BPF4_BETVU	3.5e-193	91.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8BTA0_BETVU	4.8e-166	91.6	Uncharacterized protein OS=Bet...	[more]
A0A061GLL6_THECC	4.1e-125	67.8	RNA-binding protein-related OS...	[more]
W9S109_9ROSA	2.9e-123	66.8	TATA-binding protein-associate...	[more]

BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
EWS_HUMAN	7.2e-6	37.2	RNA-binding protein EWS OS=Hom...	[more]
EWS_MOUSE	9.3e-6	36.5	RNA-binding protein EWS OS=Mus...	[more]

BLAST of Spo15819.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G28990.2	1.7e-42	43.8	RNA-binding protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	4.10.1060.10		coord: 148..183 score: 1.4
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 156..182 score: 2.
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 158..179 scor
IPR001876	Zinc finger, RanBP2-type	PROFILE	PS50199	ZF_RANBP2_2	coord: 154..185 score: 9
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 146..185 score: 4.32
None	No IPR available	PANTHER	PTHR23238	RNA BINDING PROTEIN	coord: 63..361 score: 2.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding