Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGTATCTGTCCACATTAACCGTTCAATTTGCAATTTAGAGAGAAAAAAAAGAGTCGGGGTTTAGAGGGAGAAAAT ATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAG GTTCGTCTTCCGTCTATCTTCCAGATCTAATTCTGTTTTTCGGCTTTCTGTTACATGTTTTCTGAATTTTTTAATTTATTGTCATGTTTAGAATGAAATCTGATTTGGATTATTGTTTCGATTTGTGTAACTTTTGGTGAATTGATTTGTTTAATTTGGTGCGCGAAGTGGTTCTTATTTTGCGAATTAGGGTTTTATTCTTTTAATTTTCGTGTTTTTTCGATTTGTGAATTTCGGAATGATTTGGTGGGAGAAGCCTTGTGATGTACCCGTAAATCCGTAATTCTTTAATTATGCGGGTGTTTATCACAATTCATGCTCATTGCTGCTCATAGAATTATGAAATTTGCATTGCCCCCTTTTATAATATTGGGGCGATTACTGTTTTATATCTGCAATTGTGATTCTTTACTATGAAGATTTTAATTGGTGGGTGTGAAATTACGAGGGATGTGTTAATTTGTTCTTTGTCTTCTCAAATTTGAAACCAGCATGTGTTTGCCAACTATTCGCTTGTTTTTATTTTGTGCTAATGGTAAAGTACAGGAGTTAATGTACGTCAATGTTATTTGTAAACCAACATCTTACTTTCCAGTGCCTAACCAGTAACGAGGATGATGTTGTTATGGTATATGAAGTGCCATCATCAACTAAATATCAACTCCTACAAATATTATTAGGATACCTTATCACCTGTATGACCTGTAAAATTTGCATGCTGAATCTCTAATTAGTTAAGATTGCAAGGTACATATAGTGGAAACGAATTGTCAGGGTTGTATAACTTGGTAGAGGCATGCATCTCTTTGAAATCGCGTCAAACAATTGCATGAATACTATACTATACGACCATCTTTTTTTGCATTTCTTCTAATTATACTCAGGGACATTGGCCTTTGTTATTAATCATTTAGATGGAAGCTAATACTTCGTAATAAACATACGTTTTTAGTCAACATGCCCCTCAAGCAAATCTCAAACAACCAACTCCAATGCCCTAGTCTGATGCATTCTTGTTTGTGATCTTCACTTAGTTGTGCCTTTATGTTGTGGTATTGACCACTGGCCAGAAAATGTCATGTCTTATTTTCACAACTTTTGGTGTTACCTTAGTTATCTGGTTCTGCATTTGTTCATAGTTAGCAACTTAGCATTGAGTAGTTGTTACCTTATAGAAGTGCTGATGTTGTTGTTTTCCACCTTTGGGCTGTCTATCTAACATGGTATGCCATATGTTTGATCTCAAAACGTGGTTTTGCTGCATGTATAATGATGAAGGTGAATAAATTTTTTTATTGCGTGTCACAGCTTCAATTATCGCCTGGTGCAAGAGTGTGGATCTTGAGGAAGGCATATATTGTGTGATACGGGTTTTGAATTGGGTTTTGGGGATTCTTTTCCTTTTTATGGTTTTCGAGGGAAATTCTGAATGGGCAAAATCCCTATAAAAGATGCATTTACATGAGTCGGAAACCTGATTCGTTTTTGGCTTGTTTGGTTACAATTATAAATCAAGGTTCCATCTTGTGGGAGTTGAGGTTAATTTTACAACGGTTTAAAGAGGTCTCCTCCGGAGGATTCACCTTGGATTTTATTGGTAGTTGGATGCTGAAAAGCTTCAAGATGGCCATACTGATTGGATTACGTAAAGATGGAACATGATTTCTGATTAATGGTTGAAGGGGTGGGAGTTTATTCGCAGCACCAGCTTTGGTTATAGGGGCTTTGCTGTGGAACCGGCTGGAAATAAAACTAAATCATGTCCATTATGATGCATACCTTTCTTGGAATGGAATTTTGACAAGATTATTTCTAGGATATTGTTTTTTGTTGCTGCCAAAATTCGTTTGGGAGGTACTATTTAGATGGTTAGCTTTGAGTTAAAGTTTATGGTCAATTTTGAGTTAAATATAGTGTTTGGATGGCAATGGAGTTGGTCAACCAGTTTGTCTTACCAATTGTGCAGAAACCTGTCAGTTTATGTCGATTGAATTCTTGGGTGAACATATTTTGGCAGTAGGTTTCTGGTATGCAACTGCAGGAGAAAGAATATGTGGTTTTTCAGGACAGCCCTGGCTACATAACTCTTTAGTCCATTGCTGAAGATTAAGTTTTATGCAAACTAGTAGAATGGAAATCCTGTTTTGTTGCATGTTTATCTCTACCTGTTAAAACCTGGATAAAGGCCATTTTAGGATAGAGTTCTTGGTTGGGGTTTCAAGATGTTTTTTGTCAAGCAACTGATGGCATATTTATTCTCGAATGAGAGGGACATCTATTTTTGGAATTGAAGATGTTCAGAGGATGATTCTTCAAGTGCTATGGCGAGGGCATCTCTTATTTGCTGTCCATGTCATGTTATGAGAGGGGCATCTGATGCGGGGGGATCAAATATGTTTTTTATCGACGTTGGGGGATGATTTTGTCAGCTCTCCTCAAAGGTCCGTCAAACAACTTTGGTTGACAAACTAAGAGAAAAATATTTCAGAGGAAGTTATTCTAGTATCGGAGAAGGTCAAGGCCAATGGTAGGGATCATTTGTATGGTTTGTTCACTGAACAGTAGTTTTCAGGTTTAAGATCTCATTCGGTCATTAAGTGGTCCCAGCCCCGATTCACTGAAATATCTTGCTTCCACGGGTTCAAGATGCTTATTCTTTAGGTCTTATACTCTTGAATTAGCCTTTTCTCATGATTTTCTTTGGAAGGTTTTTTGAACCAAGCCTTCAGGAGTTTTAGGTTTTGTGCTTTTAGCATTAGTCTCTTTAATCGTAGTTTTCACTGGTCCCGTTGTCTGGAGACAGCTTATTGTGCTAAAGTTCTCTGGTTTACCTCTTTGGTAGAAATCCTATCTTGCGTTCAAAATGATGCTTCAGTTTAGATATTTGTAATTCGCATGTATTCTTGCTTCAGAACGTTTTGGTGATATGGATCATGTTAGACCTGGAACTAATACATTTCCCTGCTGGTATGAGGTTAAAATTGACGGTTCTATTTCTGGATAATAAACATATTATTTAACTCGGGCTGCTTGTTTGAGAAGACTGGGACTGACCATGTCATCTTAGAGTCTTTTGATATACTACTACTGGTCGGAGGCCGTTGATATTACTGTCTCCAACCAAGTGATATGTGGGCTGTGAATCATGATCCATCTGCTAGTTTATATGGACTTTTTAATCTTCTTACCATGATATTAGTCGCAGTTCATTTCAACATCACTAGTGTTGTTTTCTTGTTCTCCTACATACACTTTCACCAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGC GTAAGTGCTTTCAGTTTCTAGTCTTTCTATCCCCAATCCGGGTTTTGCACCTGTCATTTCCCCCCTTTCTTTCAGTTTCCTGTGTGTTGGATCATCAACCATCCATTGCATCGTTTGATGTACTTTTATTTCTTTGTTTTGTGTTATAATCATTCTATTGAGTTGGATGGTTGATATGGTTCAGATCTTATGTTGTATTTTTGAAGCAGTTCTCAGCAACTTACTTTTAATCATCTTTTTGCTGTCTCAGGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAG AATTTAGAAATAGACAAGACTTGGCGCCTTTAGCTGTATTAGCTGTTATAATAGATTCGGTTTCTGGTTTTTGAGTAGAAATTGTGAGATATGAGTCTGTTCCTGTTACCTCTGTTTTACCAGGATCTAGTGTGTGTGGTACAGTTGCAGCTTCATTTTAATAGTTGGGTTTAGTTACTACATTCATCAGCTGCTGCATTCAGATTTTGTTATTTTCATTGAGGTTAAGTTGCTGCATTTGGATGAATACCCAAGTATATTTTGATCGAAGCTGAATATTGTCTATGTGAACATACATGTGAATTACGTGAGTTTCTTAGTTTGTTGTGGACTTGTGGCCTAGCTTGTGACTTCGTGTTGAATTGTTTAAGCCATGGCTAGATCCCCT mRNA sequence
GTTTGTATCTGTCCACATTAACCGTTCAATTTGCAATTTAGAGAGAAAAAAAAGAGTCGGGGTTTAGAGGGAGAAAATATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGCGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAGAATTTAGAAATAGACAAGACTTGGCGCCTTTAGCTGTATTAGCTGTTATAATAGATTCGGTTTCTGGTTTTTGAGTAGAAATTGTGAGATATGAGTCTGTTCCTGTTACCTCTGTTTTACCAGGATCTAGTGTGTGTGGTACAGTTGCAGCTTCATTTTAATAGTTGGGTTTAGTTACTACATTCATCAGCTGCTGCATTCAGATTTTGTTATTTTCATTGAGGTTAAGTTGCTGCATTTGGATGAATACCCAAGTATATTTTGATCGAAGCTGAATATTGTCTATGTGAACATACATGTGAATTACGTGAGTTTCTTAGTTTGTTGTGGACTTGTGGCCTAGCTTGTGACTTCGTGTTGAATTGTTTAAGCCATGGCTAGATCCCCT Coding sequence (CDS)
ATGGGGTCTCGAGATGAGTCGGCGCCACACCAACCCCTTTTAAGCAGCCTTGTCGTTCGGCCATCCGATAGCGGCGGTGGCGGTGGCGGCGGCAGCGATTACGAGCCAGGAGAAGTTCGCCGTGACGCTCCTCCTTATTCTCGCCCCGATCGTTATCCTGATGAAGGGTATAGAACACGGGCGGTTTCTGGTTCTCCTGTGCGTCGTAGAGATGTGGATCGTAGATATAGTCCTGCACCCATTGATCGTTTGGATGGTCCACCTCGGCATCGTGGATTTGGGGGTGGCAGAGAGAATTTGAGGTCTCCTGGTCGCTACCGTGACTTTTCGCCCCCTCATGCTCGAGGAAGGGGTGGTCGTTCATTTGGAAGAGGATTCGATGGTCCTGGTCATGGTCCTGGAGCAGTCAGAGGTGAGGGAAATCAGGGAATGCATAAGAACAACCCTAATGTGCGTCCGAGAGAAGGGGATTGGTACTGCACAGATGCAGCGTGTGGAAACTTAAACTTCGCTAGACGGGAGTACTGCAACAACTGTAAAAGGCCCCGTTATGCTCCTCCTGGAAGTCCCCGGAGGGGATATGCTGGCCCTCCACCCCCTATGGGACCCCCACGGCGCTTCCCAGGCCCACCAATGGATCGTTCACCAGGCAGGTTTGGTAATGGATACAGATCTTCGCCTCCACGCGGGTGGCCTAGAGATGGGCCGAGGGACTTTGGACCTGGTGGTCCACCTCCAAGACACGAAGGCAGGTTTCCTGACCATCACCTTCGTAGGGATCGGTTAGACTACCCTGATGAAGATTTCAGGGACCGTGGCAAGTTTGACAGGCCACCACCACCAGAATGGGGCCCACGTGACCATGCACGAGATGGCTTTTTGGACAGGAAAGGGTATGAGAGGCGACCGTTATCTCCTCTTGCACCTCCACCACCACCTCGAGGGCGATGGGCTGATCGTGATATGAGAGAGAGGAGCCGCTCCCCCATGAGGGGTGGGCCACCACCCCGTAGGGACCCTTACATGGAAAGGGGAAGGGAAGACAAACGTGGGGTTGGCCGAGACCGGATTGGCAATGTGTATTAG Protein sequence
MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYERRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNVY
Homology
BLAST of Spo15819.1 vs. NCBI nr
Match:
gi|902231262|gb|KNA22193.1| (hypothetical protein SOVF_035840 [Spinacia oleracea])
HSP 1 Score: 732.6 bits (1890), Expect = 3.200e-208
Identity = 351/361 (97.23%), Postives = 352/361 (97.51%), Query Frame = 1
Query: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTR 60 MGSRDESAPHQPLLSSLVVRPSDSGGG GEVRRDAPPYSRPDRYPDEGYRTR Sbjct: 1 MGSRDESAPHQPLLSSLVVRPSDSGGG---------GEVRRDAPPYSRPDRYPDEGYRTR 60 Query: 61 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR Sbjct: 61 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120 Query: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK Sbjct: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180 Query: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG Sbjct: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240 Query: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE Sbjct: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300 Query: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNV 360 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGRED+RGVGRDRIGNV Sbjct: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDRRGVGRDRIGNV 352 Query: 361 Y 362 Y Sbjct: 361 Y 352
BLAST of Spo15819.1 vs. NCBI nr
Match:
gi|731353802|ref|XP_010688247.1| (PREDICTED: transcription initiation factor TFIID subunit 15b [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 682.2 bits (1759), Expect = 5.000e-193
Identity = 334/366 (91.26%), Postives = 344/366 (93.99%), Query Frame = 1
Query: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDE-GYRT 60 MGSRDESAPHQPLLSSLVVRPSDSGGGGG SDYEPGEVRRDAPPYSR DRY D+ GYR Sbjct: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGG--SDYEPGEVRRDAPPYSRTDRYSDDTGYRA 60 Query: 61 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG 120 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+RGRGG Sbjct: 61 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSRGRGG 120 Query: 121 RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNC 180 R FGRGFDGPG+GPGAVRG+G MHKNNPNVRPREGDWYCTD ACGNLNFARREYCNNC Sbjct: 121 RPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREYCNNC 180 Query: 181 KRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDF 240 KR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDGPRDF Sbjct: 181 KRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDGPRDF 240 Query: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGY 300 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLDRKGY Sbjct: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLDRKGY 300 Query: 301 ERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRGVGRD 360 ERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP RRDPYMERGR+D+RGVGRD Sbjct: 301 ERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRGVGRD 360 Query: 361 RIGNVY 362 RIGNVY Sbjct: 361 RIGNVY 361
BLAST of Spo15819.1 vs. NCBI nr
Match:
gi|870851057|gb|KMT03123.1| (hypothetical protein BVRB_8g196800 isoform B [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 592.0 bits (1525), Expect = 6.800e-166
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 1
Query: 56 GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115 GYR RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+R Sbjct: 105 GYRARAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSR 164 Query: 116 GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREY 175 GRGGR FGRGFDGPG+GPGAVRG+G MHKNNPNVRPREGDWYCTD ACGNLNFARREY Sbjct: 165 GRGGRPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREY 224 Query: 176 CNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDG 235 CNNCKR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDG Sbjct: 225 CNNCKRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDG 284 Query: 236 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLD 295 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLD Sbjct: 285 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLD 344 Query: 296 RKGYERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRG 355 RKGYERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP RRDPYMERGR+D+RG Sbjct: 345 RKGYERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRG 404 Query: 356 VGRDRIGNVY 362 VGRDRIGNVY Sbjct: 405 VGRDRIGNVY 411
BLAST of Spo15819.1 vs. NCBI nr
Match:
gi|743931373|ref|XP_011009952.1| (PREDICTED: polyadenylation factor subunit 2-like [Populus euphratica])
HSP 1 Score: 459.5 bits (1181), Expect = 5.300e-126
Identity = 259/380 (68.16%), Postives = 288/380 (75.79%), Query Frame = 1
Query: 1 MGSRD--ESAPH-QPLLSSLVVRPS-----DSGGGGG--GGSDYEPGEVRRDAPPYSRPD 60 MGSRD ++APH QPLLSSLVVRPS D+ GGGG GGSDYEPGEVRR+ P YSR D Sbjct: 1 MGSRDKDQTAPHHQPLLSSLVVRPSVSDGGDAAGGGGRAGGSDYEPGEVRRELPSYSRSD 60 Query: 61 RYPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDF 120 RY D+ GYR RA SGSPVRRRD DRRYS + D PPR R F GR+ GR+RD Sbjct: 61 RYSDDPGYRLRAGSGSPVRRRDADRRYS-SDFDNSGAPPRGRDFSNGRDR----GRFRDS 120 Query: 121 SPPHARGRGG-RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNL 180 SPP+ARGRGG R GRGFDGPG GPG +RGEG M +NNPNVRPREGDW C+D CGNL Sbjct: 121 SPPYARGRGGGRPLGRGFDGPGFGPGPLRGEG---MSRNNPNVRPREGDWICSDPLCGNL 180 Query: 181 NFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPP 240 NFARREYCNNCKRPRY P GSPRR Y GPPPP PPRRFPGPP+D SPGR NGYR SPP Sbjct: 181 NFARREYCNNCKRPRYRPGGSPRRAYPGPPPPHAPPRRFPGPPLDLSPGRTMNGYR-SPP 240 Query: 241 RGWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRD 300 RGW RDGPRDFGPGG PPPR GRF DH +RR+R DYPD+++R R KFDRP P +WG +D Sbjct: 241 RGWSRDGPRDFGPGGPPPPRQGGRFSDHDMRRERSDYPDDEYRGRNKFDRPMPMDWGHKD 300 Query: 301 HARDG-FLDRKGYERRPLSPLAPPP--PPRGRWADRDMRERSRSPMRGGPPP---RRDPY 360 RDG F +RKG+ERRP SP P P P RGRW RD R+RSRSP+RG PPP R+D Y Sbjct: 301 RGRDGLFNERKGFERRPPSPPLPSPSLPQRGRWG-RDGRDRSRSPIRGAPPPKEFRQDMY 360 Query: 361 MERGREDKRGVGRDRIGNVY 362 MERGR+D+ VGRDR+ +VY Sbjct: 361 MERGRDDRHPVGRDRMRHVY 370
BLAST of Spo15819.1 vs. NCBI nr
Match:
gi|802627536|ref|XP_012076726.1| (PREDICTED: basic salivary proline-rich protein 3 [Jatropha curcas])
HSP 1 Score: 457.6 bits (1176), Expect = 2.000e-125
Identity = 259/380 (68.16%), Postives = 284/380 (74.74%), Query Frame = 1
Query: 1 MGSRDE---SAPHQPLLSSLVVRPS-----DSGGGG-GGGSDYEPGEVRRDAPPYSRPDR 60 MGSRD+ ++ HQPLLSSLVVRPS D GGGG GGGSDYEPGEVRRD PPYSR +R Sbjct: 1 MGSRDKDQTTSHHQPLLSSLVVRPSVSDGGDGGGGGRGGGSDYEPGEVRRDPPPYSRQER 60 Query: 61 YPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFS 120 Y D+ GYR A SGSP RRRD D RY + D PPR R FG GR+ PGR+RD S Sbjct: 61 YSDDPGYRIHAGSGSPARRRDADHRYG-SDFDHSGVPPRGREFGSGRD----PGRFRDSS 120 Query: 121 PPHARGR-GGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLN 180 PP+ARGR GGR GRGFDGPG GPG+ RGEG +NNPNVRPREGDW C+D CGNLN Sbjct: 121 PPYARGRVGGRPPGRGFDGPGFGPGSFRGEGMSS--RNNPNVRPREGDWICSDPLCGNLN 180 Query: 181 FARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPR 240 FARREYCNNCKRPRY P GSPRRGY GPPPP PPRRFPGPP+D SP R NGYR SPPR Sbjct: 181 FARREYCNNCKRPRYGPGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPSRNINGYR-SPPR 240 Query: 241 GWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDH 300 GW RDGPRDFGPG PPPRH GRF D +RR R D+PD+D+R R KFDRP P EWG R+ Sbjct: 241 GWGRDGPRDFGPGAPPPPRHGGRFSDQEIRRGRPDFPDDDYRGRNKFDRPIPVEWGQRER 300 Query: 301 ARDGFL-DRKGYERR---PLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPP---RRDPY 360 RD F DRKG+ERR P PLA P RGRW RD+RERSRSP+RG PP RRD Y Sbjct: 301 GRDNFFNDRKGFERRLPSPPPPLAGQVPQRGRWG-RDVRERSRSPIRGAPPVKDYRRDMY 360 Query: 361 MERGREDKRGVGRDRIGNVY 362 MERGR+D+RG+GRDRIG+VY Sbjct: 361 MERGRDDRRGMGRDRIGDVY 371
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9RRV3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035840 PE=4 SV=1)
HSP 1 Score: 732.6 bits (1890), Expect = 2.300e-208
Identity = 351/361 (97.23%), Postives = 352/361 (97.51%), Query Frame = 1
Query: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDEGYRTR 60 MGSRDESAPHQPLLSSLVVRPSDSGGG GEVRRDAPPYSRPDRYPDEGYRTR Sbjct: 1 MGSRDESAPHQPLLSSLVVRPSDSGGG---------GEVRRDAPPYSRPDRYPDEGYRTR 60 Query: 61 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR Sbjct: 61 AVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGR 120 Query: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK Sbjct: 121 SFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCK 180 Query: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG Sbjct: 181 RPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDFG 240 Query: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE Sbjct: 241 PGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGYE 300 Query: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDKRGVGRDRIGNV 360 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGRED+RGVGRDRIGNV Sbjct: 301 RRPLSPLAPPPPPRGRWADRDMRERSRSPMRGGPPPRRDPYMERGREDRRGVGRDRIGNV 352 Query: 361 Y 362 Y Sbjct: 361 Y 352
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8BPF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196800 PE=4 SV=1)
HSP 1 Score: 682.2 bits (1759), Expect = 3.500e-193
Identity = 334/366 (91.26%), Postives = 344/366 (93.99%), Query Frame = 1
Query: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGGGGSDYEPGEVRRDAPPYSRPDRYPDE-GYRT 60 MGSRDESAPHQPLLSSLVVRPSDSGGGGG SDYEPGEVRRDAPPYSR DRY D+ GYR Sbjct: 1 MGSRDESAPHQPLLSSLVVRPSDSGGGGG--SDYEPGEVRRDAPPYSRTDRYSDDTGYRA 60 Query: 61 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG 120 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+RGRGG Sbjct: 61 RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSRGRGG 120 Query: 121 RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNC 180 R FGRGFDGPG+GPGAVRG+G MHKNNPNVRPREGDWYCTD ACGNLNFARREYCNNC Sbjct: 121 RPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREYCNNC 180 Query: 181 KRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGPRDF 240 KR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDGPRDF Sbjct: 181 KRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDGPRDF 240 Query: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLDRKGY 300 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLDRKGY Sbjct: 241 GPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLDRKGY 300 Query: 301 ERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRGVGRD 360 ERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP RRDPYMERGR+D+RGVGRD Sbjct: 301 ERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRGVGRD 360 Query: 361 RIGNVY 362 RIGNVY Sbjct: 361 RIGNVY 361
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8BTA0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196800 PE=4 SV=1)
HSP 1 Score: 592.0 bits (1525), Expect = 4.800e-166
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 1
Query: 56 GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115 GYR RAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPH+R Sbjct: 105 GYRARAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHSR 164 Query: 116 GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREY 175 GRGGR FGRGFDGPG+GPGAVRG+G MHKNNPNVRPREGDWYCTD ACGNLNFARREY Sbjct: 165 GRGGRPFGRGFDGPGYGPGAVRGDG---MHKNNPNVRPREGDWYCTDPACGNLNFARREY 224 Query: 176 CNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDG 235 CNNCKR R+AP GSPRRGY GPPPPMGPPRRFPGPPMDRSPGRFGNGYRS PPR WPRDG Sbjct: 225 CNNCKRSRHAPAGSPRRGYGGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSPPPRAWPRDG 284 Query: 236 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFLD 295 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKF+RPPPPEWGPRDH RDGFLD Sbjct: 285 PRDFGPGGPPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFERPPPPEWGPRDHGRDGFLD 344 Query: 296 RKGYERRPLSPLAPPP-PPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGREDKRG 355 RKGYERRPLSPLAPPP P RGRWADRD+RERSRSP+RGGPPP RRDPYMERGR+D+RG Sbjct: 345 RKGYERRPLSPLAPPPAPSRGRWADRDIRERSRSPIRGGPPPKEFRRDPYMERGRDDRRG 404 Query: 356 VGRDRIGNVY 362 VGRDRIGNVY Sbjct: 405 VGRDRIGNVY 411
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match:
A0A061GLL6_THECC (RNA-binding protein-related OS=Theobroma cacao GN=TCM_037850 PE=4 SV=1)
HSP 1 Score: 456.1 bits (1172), Expect = 4.100e-125
Identity = 260/383 (67.89%), Postives = 286/383 (74.67%), Query Frame = 1
Query: 1 MGSRDES---APHQPLLSSLVVRPS-----DSGGGGGGG----SDYEPGEVRRDAPPYSR 60 MGSRD+ + HQPLLSSLVVRPS D GGGGGGG SDYEPGEVRR+ PPYSR Sbjct: 1 MGSRDKDQKLSHHQPLLSSLVVRPSASDGADGGGGGGGGRGGGSDYEPGEVRREPPPYSR 60 Query: 61 PDRYPDE-GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYR 120 DRY DE GYR RA S SPVRRRD D RY + DR GP R R FG GR+ PGRYR Sbjct: 61 SDRYNDEPGYRIRAGSSSPVRRRDADHRYG-SNFDRSGGPSRSRDFGNGRD----PGRYR 120 Query: 121 DFSPPHARGRGG-RSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACG 180 D SPP+ RG GG R GRGFDGPG+GPG RGEG M +NNPNVRPREGDW C D C Sbjct: 121 DSSPPYNRGPGGGRPLGRGFDGPGYGPGPFRGEG---MTRNNPNVRPREGDWVCPDPLCR 180 Query: 181 NLNFARREYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRS-PGRFGNGYRS 240 NLNFARREYCNNC+R RYAP GSPR GY GPPP PPRRFPG PMD S PGR NG+R Sbjct: 181 NLNFARREYCNNCRRFRYAPVGSPRGGYPGPPPSHAPPRRFPGSPMDLSPPGRNMNGFR- 240 Query: 241 SPPRGWPRDGPRDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWG 300 SPPRGW R+GPR+FG GG PPPRHEGRF DH +RRDRLD+ D+D+R R +FDRP P +WG Sbjct: 241 SPPRGWAREGPREFGAGGPPPPRHEGRFSDHSMRRDRLDFLDDDYRGRNRFDRPMPMDWG 300 Query: 301 PRDHARDGFL-DRKGYERRPLSPLAPPP--PPRGRWADRDMRERSRSPMRGGPPP---RR 360 RD R+ F +RKGYERRP SP PPP PPRGRW RD+RERSRSP+RG PPP RR Sbjct: 301 HRDRGRENFFNERKGYERRPPSPPPPPPQLPPRGRW-PRDVRERSRSPVRGAPPPKEYRR 360 Query: 361 DPYMERGREDKRGVGRDRIGNVY 362 D Y+ERGRED+RGVGRDR+G+ Y Sbjct: 361 DMYLERGREDRRGVGRDRMGDAY 373
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Match:
W9S109_9ROSA (TATA-binding protein-associated factor 2N OS=Morus notabilis GN=L484_001933 PE=4 SV=1)
HSP 1 Score: 449.9 bits (1156), Expect = 2.900e-123
Identity = 250/374 (66.84%), Postives = 280/374 (74.87%), Query Frame = 1
Query: 4 RDESAPHQPLLSSLVVRPSDSGGGGGGG-----SDYEPGEVRRDAPPYSRPDRYP-DEGY 63 +D++ PHQPLLSSLVVRPS S GGGGGG SDYE GEVRR+ P YSR DRY D GY Sbjct: 6 KDQTTPHQPLLSSLVVRPSTSDGGGGGGGGGRASDYEAGEVRREPPSYSRSDRYSGDSGY 65 Query: 64 RTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHARGR 123 R RA S SPVRRRD D RY+ + D L R R G R+ GR+RD+SPP+ARGR Sbjct: 66 RLRAGSTSPVRRRDSDHRYN-SDFDHLRSLARSREVGAARD----AGRFRDYSPPYARGR 125 Query: 124 G-GRSFGRGFDGPGHGPGAVRGEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYC 183 G GR FGRG DGP GPG RGEG M +NNPNVRPREGDWYC D CGNLNFARR+ C Sbjct: 126 GSGRPFGRGPDGPDFGPGLFRGEG---MSRNNPNVRPREGDWYCPDPLCGNLNFARRDSC 185 Query: 184 NNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPRDGP 243 NNCKR RY P GSPRRGY GPP P PPRRFPGPP+D SPGR NGYR SPPR W RDGP Sbjct: 186 NNCKRSRYGPVGSPRRGYPGPPLPDVPPRRFPGPPLDHSPGRTMNGYR-SPPRPWVRDGP 245 Query: 244 RDFGPGG-PPPRHEGRFPDHHLRRDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDGFL- 303 ++FG GG PPPRH+GR+PDHH+RRDRLDYPD+ +R R KFDRP P +WG RD R+ F+ Sbjct: 246 KEFGAGGLPPPRHDGRYPDHHMRRDRLDYPDDHYRGRAKFDRPMPLDWGHRDRGRESFIN 305 Query: 304 DRKGYERRPLSPLAPP----PPPRGRWADRDMRERSRSPMRGGPPP---RRDPYMERGRE 362 DRK +ERRP SPL PP PP RGRWA RD+RERSRSP+R GPPP RRD Y+ERGR+ Sbjct: 306 DRKPFERRPPSPLPPPPVPLPPNRGRWA-RDVRERSRSPLRRGPPPKDYRRDVYVERGRD 365
BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Match:
EWS_HUMAN (RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 7.200e-6
Identity = 66/177 (37.29%), Postives = 72/177 (40.68%), Query Frame = 1
Query: 87 PPRHRGFGGGRENLRSPGRYRDFSPPHARGRGGRSFGRGFDGPGHGPGAVRGEGNQGMHK 146 PP RG GG P G GR GRG D G P RG ++G Sbjct: 467 PPPLRGGPGG--------------PGGPGGPMGRMGGRGGDRGGFPPRGPRG--SRGNPS 526 Query: 147 NNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPR--------YAPPGSPRRGYAGPP 206 NV+ R GDW C + CGN NFA R CN CK P+ + PPG RG GP Sbjct: 527 GGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGD-RGRGGP- 586 Query: 207 PPMGPPRRFPGPPMDR-SPGRFGNGYRSSP------PRGWPR---DGPRDFGPGGPP 246 G R G MDR PG G R RG R G R GPGGPP Sbjct: 587 ---GGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPP 622
BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Match:
EWS_MOUSE (RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=2)
HSP 1 Score: 52.8 bits (125), Expect = 9.300e-6
Identity = 68/186 (36.56%), Postives = 75/186 (40.32%), Query Frame = 1
Query: 87 PPRHRGFGGGRENLRSPGRYRDFSPPHARGRGG---------RSFGRGFDGPGHGPGAVR 146 PP + GG P R PP G GG R GRG D G P R Sbjct: 448 PPMNSMRGG-----MPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPR 507 Query: 147 GEGNQGMHKNNPNVRPREGDWYCTDAACGNLNFARREYCNNCKRPR--------YAPPGS 206 G ++G NV+ R GDW C + CGN NFA R CN CK P+ + PPG Sbjct: 508 G--SRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGG 567 Query: 207 PRRGYAGPPPPMGPPRRFPGPPMDR-SPGRFGNGYRSSP------PRGWPR---DGPRDF 246 RG GP G R G MDR PG G R RG R G R Sbjct: 568 D-RGRGGP----GGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRG 621
BLAST of Spo15819.1 vs. TAIR (Arabidopsis)
Match:
AT4G28990.2 (RNA-binding protein-related)
HSP 1 Score: 170.6 bits (431), Expect = 1.700e-42
Identity = 145/331 (43.81%), Postives = 170/331 (51.36%), Query Frame = 1
Query: 56 GYRTRAVSGSPVRRRDVDRRYSPAPIDRLDGPPRHRGFGGGRENLRSPGRYRDFSPPHAR 115 G+RTRA S SP RR D ++ + ++ PPR R RE +PGR+RD+SPP AR Sbjct: 112 GHRTRASSSSPGRRGYEDHKHG-SDLNHSGVPPRGRELSSRRE---APGRHRDYSPPLAR 171 Query: 116 -GRGGRSFGRGFDGPGHGPGAVRGEGNQGMHKNN-PNVRPREGDWYCTDAACGNLNFARR 175 G G R + RG DGP G GM +NN V+PREGDWYC D C NLNFARR Sbjct: 172 GGAGARPYRRGLDGP------EPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARR 231 Query: 176 EYCNNCKRPRYAPPGSPRRGYAGPPPPMGPPRRFPGPPMDRSPGRFGNGYRSSPPRGWPR 235 E C CKR RYAP S PP+ PR P PPM+ SP R NGYR SPPRGWPR Sbjct: 232 ESCYKCKRHRYAPANS---------PPL--PRLLP-PPMNHSPRRDFNGYR-SPPRGWPR 291 Query: 236 DGPRDFGPGGPPPRHEGRFPDHHLR-RDRLDYPDEDFRDRGKFDRPPPPEWGPRDHARDG 295 D PPPRH+ P R RDR Y D ++ PP D A Sbjct: 292 D--------YPPPRHD--HPTWRDRERDRPHYSDHEY---------PPSRRIASDWAHTE 351 Query: 296 FLDRKGYERRPLSPLAPPPPPRGRWADRDMRERSRS---------PMRGGPPP------- 355 L + Y+RRP PL+ PP GRW R +RERSRS P+R GPPP Sbjct: 352 PLPKPHYDRRP--PLS--PPRGGRWG-RVLRERSRSPPLRDVPPPPLRDGPPPSLRGGGP 395 Query: 356 ------RRDPYMERGREDKRGVGRDRIGNVY 362 RRD + +R R D GR R+GN Y Sbjct: 412 PLHRDYRRDSHFDRERRDDGRGGRGRMGNSY 395
The following BLAST results are available for this feature:
BLAST of Spo15819.1 vs. NCBI nr
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. NCBI nr )
Total hits: 5
G T T T G T A T C T G T C C A C A T T A A C C G T T C A A T T T G C A A T T T A G A G A G A A A A A A A A G A G T C G G G G T T T A G A G G G A G A A A A T A T G G G G T C T C G A G A T G A G T C G G C G C C A C A C C A A C C C C T T T T A A G C A G C C T T G T C G T T C G G C C A T C C G A T A G C G G C G G T G G C G G T G G C G G C G G C A G C G A T T A C G A G C C A G G A G A A G T T C G C C G T G A C G C T C C T C C T T A T T C T C G C C C C G A T C G T T A T C C T G A T G A A G G G T A T A G A A C A C G G G C G G T T T C T G G T T C T C C T G T G C G T C G T A G A G A T G T G G A T C G T A G A T A T A G T C C T G C A C C C A T T G A T C G T T T G G A T G G T C C A C C T C G G C A T C G T G G A T T T G G G G G T G G C A G A G A G A A T T T G A G G T C T C C T G G T C G C T A C C G T G A C T T T T C G C C C C C T C A T G C T C G A G G A A G G G G T G G T C G T T C A T T T G G A A G A G G A T T C G A T G G T C C T G G T C A T G G T C C T G G A G C A G T C A G A G G T G A G G G A A A T C A G G G A A T G C A T A A G A A C A A C C C T A A T G T G C G T C C G A G A G A A G G G G A T T G G T A C T G C A C A G A T G C A G C G T G T G G A A A C T T A A A C T T C G C T A G A C G G G A G T A C T G C A A C A A C T G T A A A A G G C C C C G T T A T G C T C C T C C T G G A A G T C C C C G G A G G G G A T A T G C T G G C C C T C C A C C C C C T A T G G G A C C C C C A C G G C G C T T C C C A G G C C C A C C A A T G G A T C G T T C A C C A G G C A G G T T T G G T A A T G G A T A C A G A T C T T C G C C T C C A C G C G G G T G G C C T A G A G A T G G G C C G A G G G A C T T T G G A C C T G G T G G T C C A C C T C C A A G A C A C G A A G G C A G G T T T C C T G A C C A T C A C C T T C G T A G G G A T C G G T T A G A C T A C C C T G A T G A A G A T T T C A G G G A C C G T G G C A A G T T T G A C A G G C C A C C A C C A C C A G A A T G G G G C C C A C G T G A C C A T G C A C G A G A T G G C T T T T T G G A C A G G A A A G G G T A T G A G A G G C G A C C G T T A T C T C C T C T T G C A C C T C C A C C A C C A C C T C G A G G G C G A T G G G C T G A T C G T G A T A T G A G A G A G A G G A G C C G C T C C C C C A T G A G G G G T G G G C C A C C A C C C C G T A G G G A C C C T T A C A T G G A A A G G G G A A G G G A A G A C A A A C G T G G G G T T G G C C G A G A C C G G A T T G G C A A T G T G T A T T A G A A T T T A G A A A T A G A C A A G A C T T G G C G C C T T T A G C T G T A T T A G C T G T T A T A A T A G A T T C G G T T T C T G G T T T T T G A G T A G A A A T T G T G A G A T A T G A G T C T G T T C C T G T T A C C T C T G T T T T A C C A G G A T C T A G T G T G T G T G G T A C A G T T G C A G C T T C A T T T T A A T A G T T G G G T T T A G T T A C T A C A T T C A T C A G C T G C T G C A T T C A G A T T T T G T T A T T T T C A T T G A G G T T A A G T T G C T G C A T T T G G A T G A A T A C C C A A G T A T A T T T T G A T C G A A G C T G A A T A T T G T C T A T G T G A A C A T A C A T G T G A A T T A C G T G A G T T T C T T A G T T T G T T G T G G A C T T G T G G C C T A G C T T G T G A C T T C G T G T T G A A T T G T T T A A G C C A T G G C T A G A T C C C C T 200 400 600 800 1000 1200 1400 Expect = 3.20e-208 / Id = 97.23 Expect = 5.00e-193 / Id = 91.26 Expect = 6.80e-166 / Id = 91.61 Expect = 5.30e-126 / Id = 68.16 Expect = 2.00e-125 / Id = 68.16 Sequence KNA22193.1 XP_010688247.1 KMT03123.1 XP_011009952.1 XP_012076726.1
back to top
BLAST of Spo15819.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL )
Total hits: 5
G T T T G T A T C T G T C C A C A T T A A C C G T T C A A T T T G C A A T T T A G A G A G A A A A A A A A G A G T C G G G G T T T A G A G G G A G A A A A T A T G G G G T C T C G A G A T G A G T C G G C G C C A C A C C A A C C C C T T T T A A G C A G C C T T G T C G T T C G G C C A T C C G A T A G C G G C G G T G G C G G T G G C G G C G G C A G C G A T T A C G A G C C A G G A G A A G T T C G C C G T G A C G C T C C T C C T T A T T C T C G C C C C G A T C G T T A T C C T G A T G A A G G G T A T A G A A C A C G G G C G G T T T C T G G T T C T C C T G T G C G T C G T A G A G A T G T G G A T C G T A G A T A T A G T C C T G C A C C C A T T G A T C G T T T G G A T G G T C C A C C T C G G C A T C G T G G A T T T G G G G G T G G C A G A G A G A A T T T G A G G T C T C C T G G T C G C T A C C G T G A C T T T T C G C C C C C T C A T G C T C G A G G A A G G G G T G G T C G T T C A T T T G G A A G A G G A T T C G A T G G T C C T G G T C A T G G T C C T G G A G C A G T C A G A G G T G A G G G A A A T C A G G G A A T G C A T A A G A A C A A C C C T A A T G T G C G T C C G A G A G A A G G G G A T T G G T A C T G C A C A G A T G C A G C G T G T G G A A A C T T A A A C T T C G C T A G A C G G G A G T A C T G C A A C A A C T G T A A A A G G C C C C G T T A T G C T C C T C C T G G A A G T C C C C G G A G G G G A T A T G C T G G C C C T C C A C C C C C T A T G G G A C C C C C A C G G C G C T T C C C A G G C C C A C C A A T G G A T C G T T C A C C A G G C A G G T T T G G T A A T G G A T A C A G A T C T T C G C C T C C A C G C G G G T G G C C T A G A G A T G G G C C G A G G G A C T T T G G A C C T G G T G G T C C A C C T C C A A G A C A C G A A G G C A G G T T T C C T G A C C A T C A C C T T C G T A G G G A T C G G T T A G A C T A C C C T G A T G A A G A T T T C A G G G A C C G T G G C A A G T T T G A C A G G C C A C C A C C A C C A G A A T G G G G C C C A C G T G A C C A T G C A C G A G A T G G C T T T T T G G A C A G G A A A G G G T A T G A G A G G C G A C C G T T A T C T C C T C T T G C A C C T C C A C C A C C A C C T C G A G G G C G A T G G G C T G A T C G T G A T A T G A G A G A G A G G A G C C G C T C C C C C A T G A G G G G T G G G C C A C C A C C C C G T A G G G A C C C T T A C A T G G A A A G G G G A A G G G A A G A C A A A C G T G G G G T T G G C C G A G A C C G G A T T G G C A A T G T G T A T T A G A A T T T A G A A A T A G A C A A G A C T T G G C G C C T T T A G C T G T A T T A G C T G T T A T A A T A G A T T C G G T T T C T G G T T T T T G A G T A G A A A T T G T G A G A T A T G A G T C T G T T C C T G T T A C C T C T G T T T T A C C A G G A T C T A G T G T G T G T G G T A C A G T T G C A G C T T C A T T T T A A T A G T T G G G T T T A G T T A C T A C A T T C A T C A G C T G C T G C A T T C A G A T T T T G T T A T T T T C A T T G A G G T T A A G T T G C T G C A T T T G G A T G A A T A C C C A A G T A T A T T T T G A T C G A A G C T G A A T A T T G T C T A T G T G A A C A T A C A T G T G A A T T A C G T G A G T T T C T T A G T T T G T T G T G G A C T T G T G G C C T A G C T T G T G A C T T C G T G T T G A A T T G T T T A A G C C A T G G C T A G A T C C C C T 200 400 600 800 1000 1200 1400 Expect = 2.30e-208 / Id = 97.23 Expect = 3.50e-193 / Id = 91.26 Expect = 4.80e-166 / Id = 91.61 Expect = 4.10e-125 / Id = 67.89 Expect = 2.90e-123 / Id = 66.84 Sequence A0A0K9RRV3_SPIOL A0A0J8BPF4_BETVU A0A0J8BTA0_BETVU A0A061GLL6_THECC W9S109_9ROSA
back to top
BLAST of Spo15819.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. ExPASy SwissProt )
Total hits: 2
G T T T G T A T C T G T C C A C A T T A A C C G T T C A A T T T G C A A T T T A G A G A G A A A A A A A A G A G T C G G G G T T T A G A G G G A G A A A A T A T G G G G T C T C G A G A T G A G T C G G C G C C A C A C C A A C C C C T T T T A A G C A G C C T T G T C G T T C G G C C A T C C G A T A G C G G C G G T G G C G G T G G C G G C G G C A G C G A T T A C G A G C C A G G A G A A G T T C G C C G T G A C G C T C C T C C T T A T T C T C G C C C C G A T C G T T A T C C T G A T G A A G G G T A T A G A A C A C G G G C G G T T T C T G G T T C T C C T G T G C G T C G T A G A G A T G T G G A T C G T A G A T A T A G T C C T G C A C C C A T T G A T C G T T T G G A T G G T C C A C C T C G G C A T C G T G G A T T T G G G G G T G G C A G A G A G A A T T T G A G G T C T C C T G G T C G C T A C C G T G A C T T T T C G C C C C C T C A T G C T C G A G G A A G G G G T G G T C G T T C A T T T G G A A G A G G A T T C G A T G G T C C T G G T C A T G G T C C T G G A G C A G T C A G A G G T G A G G G A A A T C A G G G A A T G C A T A A G A A C A A C C C T A A T G T G C G T C C G A G A G A A G G G G A T T G G T A C T G C A C A G A T G C A G C G T G T G G A A A C T T A A A C T T C G C T A G A C G G G A G T A C T G C A A C A A C T G T A A A A G G C C C C G T T A T G C T C C T C C T G G A A G T C C C C G G A G G G G A T A T G C T G G C C C T C C A C C C C C T A T G G G A C C C C C A C G G C G C T T C C C A G G C C C A C C A A T G G A T C G T T C A C C A G G C A G G T T T G G T A A T G G A T A C A G A T C T T C G C C T C C A C G C G G G T G G C C T A G A G A T G G G C C G A G G G A C T T T G G A C C T G G T G G T C C A C C T C C A A G A C A C G A A G G C A G G T T T C C T G A C C A T C A C C T T C G T A G G G A T C G G T T A G A C T A C C C T G A T G A A G A T T T C A G G G A C C G T G G C A A G T T T G A C A G G C C A C C A C C A C C A G A A T G G G G C C C A C G T G A C C A T G C A C G A G A T G G C T T T T T G G A C A G G A A A G G G T A T G A G A G G C G A C C G T T A T C T C C T C T T G C A C C T C C A C C A C C A C C T C G A G G G C G A T G G G C T G A T C G T G A T A T G A G A G A G A G G A G C C G C T C C C C C A T G A G G G G T G G G C C A C C A C C C C G T A G G G A C C C T T A C A T G G A A A G G G G A A G G G A A G A C A A A C G T G G G G T T G G C C G A G A C C G G A T T G G C A A T G T G T A T T A G A A T T T A G A A A T A G A C A A G A C T T G G C G C C T T T A G C T G T A T T A G C T G T T A T A A T A G A T T C G G T T T C T G G T T T T T G A G T A G A A A T T G T G A G A T A T G A G T C T G T T C C T G T T A C C T C T G T T T T A C C A G G A T C T A G T G T G T G T G G T A C A G T T G C A G C T T C A T T T T A A T A G T T G G G T T T A G T T A C T A C A T T C A T C A G C T G C T G C A T T C A G A T T T T G T T A T T T T C A T T G A G G T T A A G T T G C T G C A T T T G G A T G A A T A C C C A A G T A T A T T T T G A T C G A A G C T G A A T A T T G T C T A T G T G A A C A T A C A T G T G A A T T A C G T G A G T T T C T T A G T T T G T T G T G G A C T T G T G G C C T A G C T T G T G A C T T C G T G T T G A A T T G T T T A A G C C A T G G C T A G A T C C C C T 200 400 600 800 1000 1200 1400 Expect = 7.20e-6 / Id = 37.29 Expect = 9.30e-6 / Id = 36.56 Sequence EWS_HUMAN EWS_MOUSE
Match Name E-value Identity Description
EWS_HUMAN 7.2e-6 37.2 RNA-binding protein EWS OS=Hom... [more]
EWS_MOUSE 9.3e-6 36.5 RNA-binding protein EWS OS=Mus... [more]
back to top
BLAST of Spo15819.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. TAIR )
Total hits: 1
G T T T G T A T C T G T C C A C A T T A A C C G T T C A A T T T G C A A T T T A G A G A G A A A A A A A A G A G T C G G G G T T T A G A G G G A G A A A A T A T G G G G T C T C G A G A T G A G T C G G C G C C A C A C C A A C C C C T T T T A A G C A G C C T T G T C G T T C G G C C A T C C G A T A G C G G C G G T G G C G G T G G C G G C G G C A G C G A T T A C G A G C C A G G A G A A G T T C G C C G T G A C G C T C C T C C T T A T T C T C G C C C C G A T C G T T A T C C T G A T G A A G G G T A T A G A A C A C G G G C G G T T T C T G G T T C T C C T G T G C G T C G T A G A G A T G T G G A T C G T A G A T A T A G T C C T G C A C C C A T T G A T C G T T T G G A T G G T C C A C C T C G G C A T C G T G G A T T T G G G G G T G G C A G A G A G A A T T T G A G G T C T C C T G G T C G C T A C C G T G A C T T T T C G C C C C C T C A T G C T C G A G G A A G G G G T G G T C G T T C A T T T G G A A G A G G A T T C G A T G G T C C T G G T C A T G G T C C T G G A G C A G T C A G A G G T G A G G G A A A T C A G G G A A T G C A T A A G A A C A A C C C T A A T G T G C G T C C G A G A G A A G G G G A T T G G T A C T G C A C A G A T G C A G C G T G T G G A A A C T T A A A C T T C G C T A G A C G G G A G T A C T G C A A C A A C T G T A A A A G G C C C C G T T A T G C T C C T C C T G G A A G T C C C C G G A G G G G A T A T G C T G G C C C T C C A C C C C C T A T G G G A C C C C C A C G G C G C T T C C C A G G C C C A C C A A T G G A T C G T T C A C C A G G C A G G T T T G G T A A T G G A T A C A G A T C T T C G C C T C C A C G C G G G T G G C C T A G A G A T G G G C C G A G G G A C T T T G G A C C T G G T G G T C C A C C T C C A A G A C A C G A A G G C A G G T T T C C T G A C C A T C A C C T T C G T A G G G A T C G G T T A G A C T A C C C T G A T G A A G A T T T C A G G G A C C G T G G C A A G T T T G A C A G G C C A C C A C C A C C A G A A T G G G G C C C A C G T G A C C A T G C A C G A G A T G G C T T T T T G G A C A G G A A A G G G T A T G A G A G G C G A C C G T T A T C T C C T C T T G C A C C T C C A C C A C C A C C T C G A G G G C G A T G G G C T G A T C G T G A T A T G A G A G A G A G G A G C C G C T C C C C C A T G A G G G G T G G G C C A C C A C C C C G T A G G G A C C C T T A C A T G G A A A G G G G A A G G G A A G A C A A A C G T G G G G T T G G C C G A G A C C G G A T T G G C A A T G T G T A T T A G A A T T T A G A A A T A G A C A A G A C T T G G C G C C T T T A G C T G T A T T A G C T G T T A T A A T A G A T T C G G T T T C T G G T T T T T G A G T A G A A A T T G T G A G A T A T G A G T C T G T T C C T G T T A C C T C T G T T T T A C C A G G A T C T A G T G T G T G T G G T A C A G T T G C A G C T T C A T T T T A A T A G T T G G G T T T A G T T A C T A C A T T C A T C A G C T G C T G C A T T C A G A T T T T G T T A T T T T C A T T G A G G T T A A G T T G C T G C A T T T G G A T G A A T A C C C A A G T A T A T T T T G A T C G A A G C T G A A T A T T G T C T A T G T G A A C A T A C A T G T G A A T T A C G T G A G T T T C T T A G T T T G T T G T G G A C T T G T G G C C T A G C T T G T G A C T T C G T G T T G A A T T G T T T A A G C C A T G G C T A G A T C C C C T 200 400 600 800 1000 1200 1400 Expect = 1.70e-42 / Id = 43.81 Sequence AT4G28990.2
Match Name E-value Identity Description
AT4G28990.2 1.7e-42 43.8 RNA-binding protein-related [more]
back to top