Spo15925.1 (mRNA) | SpinachBase

Overview


Name	Spo15925.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Elongation factor P family protein
Location	chr5 : 27268587 .. 27281611 (-)
Sequence length	1005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTAACAAATATTTGATGGGCTTGCTCCAAAAACAACTGAAATTCCATTAGAAAAACATCAAATTTGGCATTTCTAATATTTCCTTATCATGAAAAATGGCCTAAGGTTCCACTGAACTCACCACCCTTCTCTCTCTTTCTCTCTCCAACTCAGACCAACAATGGCGGGAATAGCAACCATCAAGCTCTCCCAATCTCCTTCCATTCGCCCATCATCCGCTTCATTTTCATCCAACCCATCTTTGAAAGGCCTCAAACACTCCGTTGCACTACCCCGCCGCACTAGATTCTCTAGTAAATTTCTCATGTTTTTGCTTGTTTTTTTTAGTTGTGCTAATTTTGATGTTTATACTTAGAATTTTGAATAATTTAATGGGAATTGTGTCACTAATTTTGGTTTTCGCAGAGATTTATGCTTTGAGTAGCAATGACATTAAGGTGGGTACTAGTCTTGAGGTGGATGGAGCTCCTTGGAAAGTCTTAGGTAATTTTGATTCCACTCAATTTCCCTATATTTTTCATTTTTTTCAATTTTTAGTTAATGGGTATCTTTATCTTGACAATGTACTGGTAATTAAGCCTTGAAATTGGATTTCTAGCTTTTCAAGAATTGGGGTTTTGGCATGTTTTTCCGTCTAATATTCAAGTGAACTGCTGCCACTCCTTCACTCCCCCCAACGGTTACCCTCGCTCAGTGTGTGATAGTGAGTAGACGGGATTTGAACCGAGGTCATGGCTGCCAGTCTACCACCAACGACCCTTACAACTAAGATGCTCATCACTAGAAATTTAGCTTTTTGAATGAGGTTTTTCCGGTTTTTATTGTGATTTTATACATGTGCTCTTTCGAGTTTGAATTCGATTATAGATGCTGGCAAATCTTTATCAATTAGTTCATTATTTATTTCCAAAAAGTTGCCATCCTCATATGGTTTGGGTATTGAGCATTATTGATGGAGTGTAACTGTGTAATGGAACCACGGTTTGTTTTGTCTCGTTATCTCTCGAGAAAGACTAGGCAGCTTAGTTAACGGACTGTCTCCCTTCACCATCCTTTACACCTTCAAGAACGGGGGAGAAGGGAAAGCAATGTAATGTAATATCGCGTAAAATATATGATGATTTATGATCACGAGCTTGTGGGATTGGGGGTTTCTACCATTTGATGATCGTATAAAGAGTCTGTGTTAAAATAATTTAATGGGTAAAATCAGTTTGATAGTTGGCTTGCACTTATGATGCTTGATTCTTCTTCCGTACTAGTTAGACTATTGATTCTTTACCCTGGAGGCTGAAACCTTTTTTCCTTGTAGAGTTTCTTCATGTGAAACCAGGAAAAGGGGCTGCTTTTGTGAGGACTAAAATGCGTAACTACGTGACGGGGAACACAGTTGAGAAGACCTTTAGAGCTGGAGTCTCGGTATGTTTTCTGAACTGGTGCATTGATTTTCATTGTTGTGCTTCTGAGCTCTTTTTCCTAACTTGTTCTTATCCTTGGGTTGGGGACACTGACACAGCTTTGTCATTTGATCAAGAAATCAACAGTCAAACCTGCTTTCCGAATCGAGTCAGTTTTAGTCGACTATATTAATTTATAACGTATCTGAATTAGTCCATATCAGTGTTTATGGATTGTGGATATTTATCGACCATGTATTTTGTGCATGCTGGCGTACAACTTCATCCCACTTTTCTAAATCTCTGTAACGGGGACGAAACAGTAACTTTTCTTCTTGGTTTGGGAAGGTGGATTGGACATGTAAATCAGTTTGAAGCTGGTGGTGTTGGTGGTGGTGGTGGTGGTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNAGTGGTGTTGTGTGTGAGTTTCCTATCTTGTACTCTAGCCAGGTCAAAGTAACATACTAACATCTCATTAAGTAGCTCCCTTTATTTTTAACGGTTAAGAGTTAACTACTCAGTTTTGCATTTTTAACTTCTTGGTTGGACATGGATTTTATATTGACAGATACCTGAAGCAAATGTAGTCAAGGAAACAAAACAATTCACATACAAAGATGGAAGTGTTTATGTCTTCATGGATTTGGTATAGTTCTTTTTCCCTATGATTATGATTTTATTCAGTGTTTTCTACATGGCTATAGGTCAAATCCTACATGATTATAGGTGAATGTGCTTTGTGATGAGCTGCATTAGCAGATAAAATGCTTTGAATTCCTGGGTATGCACATTGCATTTTTGAGTTTAACATTATTTCGTGTCAATTTAATGGTATTGAGCGCCCTGCCAATTTTGTGACTTTCCAAATAGGATAGGTCTCATTAATTTCTTACTCCTGTGGTGTCTTGTGCATGCTTTACTCAATCATTAAGAACGTATCAATTCTTTACCGAGTGTCGTAATTCGTTGCTTTCAGCTTCTCAATCTACTTTTCATGTCAGTGTGAGCAAATATGTTTGTATTACATATGGTTTTTAAGGTTGGACTTTTCTACCTGCATGTTTTGTTGTTCTTCACTCCACACAAGTGCACAACATGTCCATGATACACGATTGCCAGAAACATAGCAGTGGTGGGGTGGCTCAGAGATGTATTTTATTTGTATCTAGTTGTTCTTCAGTGAGCATGTAGGGTGATGTAGCTCTAATTTTGCCACCAACATGAGAAATATTCTATTACAGTATTATGCAAACCTTGTGAACTTTTGCGTGCTGTTATTAAGTTACTGAAATTTAAGTCTATCACTTGAAATTTTTATAGCTAGTTAAGCTTAATACTAATGCACTTCCTACCAAAAAGCTCCTTCCAACAATAAATCTGTTATGATCTTGTGAATTTGCATAAATAAACAATCAAGGTCAGATTTTAAAGAAGAAGACGAATGTGGTTGCTATTTCTGGAAAACAGAACACTTGATTGATAAATCAAGCTTTCTAGCGGGTTGTTTCTCTGCCAAAAGCTAACATTACAATTTCTGTCCCTCCTACACTCCTTTATGAAGTATATAGCATTCGTTCTCTTCTCCCTTCTCCCTCCCTCTCTTCGAACTAACCAACTGTCTTCCTCTTCAAGCTACTCTAAACCAGTGGCGGTGCCAGGATTTTTTTATTAAGGGTTCAAAATTTTGAAACGCATATGAAAAAATCAAACACGACAATCTAAAATCCTTATTACAACTGATAATATGGCGGTGCATATATATTACAAATAACATTAAAAAACATTGCAGTTGAACTCGAAGAAATGGTGTTTTAATCATAGATAAAAAATGCAGTATCGGTCGCGGGATCGGTCGCGGAGTCTCGGTAACGGAAATGATGCGTTAGTCGCGGACCGTGTCGCGGTTGTCGCGTAGAAATTTGAAATTTGAAAAAGAAGCCCCATGTCGGCCCCATTCACTATCTATCCTAGTTCCCCTCCCCTAAACTGTACACATGACATAATTAAAATGAATTCATTTGTCTACCTTCTCTTTCCTCTCTTGTTTTAGATTTGAAAATGGAGTTCTCTACTCTATGTCATTGGAGTTTATCCATTTCTTTCCTTTTTCCCTTTCTTTTTGTCGACAACATGGGGAATTCGGCTGAAAACCGAGTAGATGTGAGGTTTATAACGTTTAATGCGGACAAAATTCGTTCGGATCGGTTGCACCGGCCGAGATCTCGGCGTTTTTAAAAACACCTTTACAACTCGGGATGTCTCGTATCGCCAGCATCCAAAACCTTGTTAACTCGGGCGATACGAGTTAACTCGGGCGAGTTTTTACACCATGGTTTTAATTGACAACATTCATCTCATATCAACCTATTCACAATCATAATGTCAATTTCAATCTAACAAAATTTAAATTGTAAAGTAACGAGTGAGTTATAACTCTAAACTAAAATCTAACATTATGTTGTTGAAATAGCTAGTTTAGCAACTTTAAATCAATTGAATGAAAAAAGTAATTGCTGTTAAGAGTCAAACATTTACACTAAAAAATGTGAATGTCCAACCTATCATTTAATGTATTGGCAAATTTTTTTGCCACCTACTCTAGGTAAACTAGCTAGTAGCTTGATATTGAATAGTGAAATCACCACTATAAATACCAATGCAAATCATTTGTAACAACTGAATACAAGCAATACATTTTACATAACCGAGAGTTTGTATCATATCAGATATAAACTTTTGCTTATTTCCTATCACCTCACAACACGTTATCAGCACCATTTTTTTCATCAGGTATATTTTTACCTGTTACTCAAAATTTAGAAAAAGTGTTACATGTTCTTAACAAAATGTTTTGAGTAGTATGCTCTATAGTTTCCCATATTTGGGATCCTCTATATCAGAAAATCTAAAGACCCGTTTTAATCATCAAAGAGAGTTCACATTGCTATCGGTCTTGTGAGCAACCTGGTAAAAGGAGAAAATGCTTGTATACTATATTTATGACACTTGTTTGTTTTTCTTAGTCATGCATAATTGTATATATGACTCTTACGTACTACTTGCATGCATAGTAATATTAGCCATGAATTATCATTACATATATACTATTCCTTTGCATGCATATACCTAGACTAGACTTAAAATAAAATTATTTTTATAAAAACGATGTAGCCTTTATTTTCAGCTACATCTTTATTTTTGTTTTTCGAACCCATGATCTCTTAAACAGACTAGGGTTCTCGGACTATTACGGCTTGCATCCCGGGGATATCCTTTTACAACTTTAATTCTATATATCTACTATTTCTTTTCAAATTCACACTGACACATTTTTCTGGGTAGTAAGTAATAAAAATTATTAACCTGTTTAGAATATTATATACCAGTTTACTGTAACAAAATTGTATAATACAATCATGATTTATCTCCTATAAAAGGGGGATTACGCGTCCCATTTTCACCACACAACATCTTATCTCCTTCTTACTTTTTATCCAAAACCACACAAATTTTCCTCCATTTTTTTCCGATCAAACATGTTTCCGGCCGGCGACCCCAATCCTCGACATGTCTTCACCTTCGAGGAAGATTTAAGAAAATTTAAACAATATAATGTTTTAATGATGGCTTTAGTAGTCATTCTTATGGCATTAATGATTTTCATAATTTTCAACAAATGAAGATCTCCATTTTATTTTTATTTCCGGCGAGTAGGAACAAAATGCATTATGTTTGTAGTACTTCAATTTTCCATTTTGATGTATTAATTGCATTTTGTTGCATTTTTAATTTTTTTAACCATATTATTATTAATGTTATCATTATTATTATTTTTTCTTTTCGCTTTTAATTAACGTTATTATCATGATTTACTTATGTGTGGTTCATAATAATAAACTAAGGGGGAGAAGAAAAGATAACATTTTAATGATAGTTAATTATTATGAATGTGATTAATTAATTATAATGTTGATTACTAAATTTAATGATTATTTGATTGTAGTTAAAATGAGAGATTTGATGAAAAGATAATTCAATGTGCTAGACTTGTCTGGACACAATTTTCTAAAATGGACTGTTGATGCACAGATGAATCTAAAATCCCAAGGACTGGACCATACCATAAAAGATATAATGGTTCCAGGCACCACACCACAGAAATCAAAACTGCAACCGAGCAGGAAAAGGCCAAAGCCACAGTCCTCATAAGGCATCATTTACATGATAGCCTGAAAACTGAATATCTGATGGTGGAGAATCCCAAAGAGTTGTGGGATAGCCTTAAAGAAAGATATGGACACCATAAAAGGGTGCTCCTGCCAAAGGCTCAATTTGACTGGACCAATCTGAGGTTCCAGGATTTTAAATGTGTTAGTGAATATAATTCCATGTTATTCAAAATTGTATCATTGCTGAGATACTGTGATCAAGCGGTCACAAAAGATCAAATGATAGAGAAAACCCTCTCCACCTTTCATGCGAATAATATTTTATTGCAACAGCAATACCGAGAGAGGGGCTTTAACAGATATTCTGAGCTGATTTCTCTATTGTTGGTTGCTGAACAGAATAATGGTCTTCTGTTAAAGAACTATAATCTTAGACCAACTGGGTCTATGGCATTCAATGAAGCGAATGCTGTTGAAAGCCCAAACCCACCTGAGGCAAATGTTGCCCATAGAGGTGGACGTGGAAGATTTAACCACCGCGGTAGAGGACGCGGAAACCACCGCGGACGTAGTCGTGGTCGTGGCAGGGGTTATCTGGGCCCTAGAAATAATAATCACAAAGGGCATCAACAAGGAAATCAAAAGCACACCCCCTCAAAAGAGAAAGACACATGTTTTAGATGTGGGATGACTGGCCATTGGGGGAAAACATGCCGTACTGCAAAACATTTGGTAGATCTGTACCAAGCCTCCATAAAAGGCAAAGGAAAAGTTGCCGAGGCAAATTACGTAGATGAGGAAAATTCCTCGGGGCCAAGCTTTTGATGTATCTGATTTCTTCAATGATAACCCTGACAATGGCAATGATCTGATGTTTGGGGATAATAGTAACATATAAATACCCCATCTAAACTATGTCATGTATTGTTTTTATGTATTTTTCTTATGTATTTTTCGATTACCTTGTTATGAATTTCTAATTTTCATGAATAAAGTATTTTATTATAATCGTTTCTCTAAACTAATTGCATATTTATTTATGAAGATATGAATCTACCTGAAGNTTATAATCGTTTCTCTAAACTAATTGCATATTTATTTATGAAGATATGAATCTACCTGAAGTTGGTTCCAAGTACTAATGTCTTCTGGACAGTGCAGCAATACATACTATCTTAAAAGATAGGAAGTATTTTTCAAAACTAACAATGTACCAAGCAAATGTCAATACAATTTCCGGGACAGCAAAGCTAATAGAAGGATCTGGAAAAGCTTGCATTGTCCTCACAATGGAACAAAATTGATTATTAATGACGCTTTATATTCGAGTAAATCTCGAAGAAATCTAAGTTTCAAAGATGTGCGTCAAAATGGATATCATCTAGAAACAATGACAGTGGATCAAAAAGAATATTTATGCCTCAGAAAAATGTGGCAAGAAACATATTTATGAGAAATTGCCAGCATACTCTTCAGGGCTATATCGTATGGATATACGGCCAATTGAAATAAATATGATATCTAACAAGAAGTTAGATGGCAAGAATTTGCTCACATTATGGCATGACCGTTTCGGTCATCCTGGAACAGGAATGATGCACAAGATTGTAGCAAATTCAATCGGGCATTCAATAAGGAATGTTAAAATACCCCGATCAAATGAACTGACATGCTCTGCATGCTCTCTTGGCAAACTGATTATAAGGCCATCTAAAAACAAAATCGCCACTGAATCTCCATCATTTTTAGAAAGAATTCAGGGAGATATCTGCGGGCCACTTAATCCTGCAAGTGGACCATTCCGATATTTTATGGTATTGATCGATGCTTCAACACGATGGTCACATGTGAGTCTCTTGTCAAGTAGAAATGTTGCATTTGCAATTCTACTTGCCTAGATCACCAAATTACGAAATCAATTCCCGTACCACACAATAAAGAAAATAAGACTCGACAATGCTGAGGAATTTACATCCCAAACTTTTAACGATTATTGCATGTCGATTGGAATTGTTGTTGAACATCCAGTGGCTCATGTACATACACAAAATGGTCTCGCTGAGTCACTGATCAAGAGGCTACAATGGATTGCAAGACCATTGTTAATACGAACAAAATTACCATCATCTGCTTAGGGCCATGCTATTTTACACGCGGCAGCGTTAGTAAGATTGAGACCGACAGCTTATCATGAGTTCTCACCTCTACAGTTGGTATATGGTCGAGAACCAAATGTCTCACATCTAAAAATATTTGGTTGTGCCGTGTATGTTCCCATTGCTCCACCCCAACGCACAAAAATGGGTCCACAAAGAAGGTTGGGAATTTATGTTGGGTATGAGTCCCCATCCATAATTAGATACCTTGAGCCAATGACTGGCGATTTATTTAAGGCAAGGTTTGCTGACTGTCATTTTAATGAGTCAGTATTCCCAGCCTTAGGGGGAGAGAAAGTGGACCCGCGGAAAAAGGAGATTGAAATCACATGGAATGCAACACAACTGTCAATATTTGATCCACGAACAAATTCATGTGAACAAGAAGTCAAGAAAATTGTTCATTTACAAAGTGTTGCAAATCAATTGCCAGATTTATTCACGGATACAAAGAAAGTGACAAAGTCACATATACCAACAGAAAATGCACCTGCACGCATTGTAATTCCCACTGATAATAAGGCCATTGAAAATGAGTCTATGGCATGACGAAAACGTGGAAGACCATTTGGTTCAAAAGATTCTAAGCCAAGAAAAGTAAAAAGGCCTTATGGAGTAACAAATGAAATCAATATTGATCCTCCAAAAGAAGGTCATGAAAGACCAAATGAATAAGAAAATATAGATAAAGATGATCCTCCTAAAGAGGAGGAAGAAAATCATAAAGAAGTCGATAACGATGAAATTTCAATGAACTATGTTTCAACCAAGGAACATTATAACCGGAAAATTGTTATCGTAGATCAAATATTTGCTTACTCCATTACAATTGAATTGATATCTGATAATGATGACCCTGAACCAAAAACAGTGGATGAATGTCGTCGCAGACATGATTGGCCAAAATGGAAAGAGGCAATTCAGGCAGAATTGAAATCCCTTGAAAAACGCGAGTTTTTTTAAAATATCCACTACACCAAAGGGTGTAAAACCTATCAGACACAAATGGGTATTTGTGAGAAAAAGAAATGAGAACAATAAGGTTACAAGATACAAGGCAAGGCTAGTTGCCCAAGGTTTTTCTCAAATACCAGGGATTGATTACGAGGAGACATATTCTCCAGTAGTTGATGCAAAAACACTAAGATTTCTGGTAAGCTTGACAGTTTTGAAAGAACTGCAAATGCGATTAATGGACGTTGTGACCGCATATTTATATGGGTCCCTTGACGCAGACATTTATATGAAAGTCCCCGAAGGACTAAAATTACCAGAAAACCACAAGCCTAAGGAAATGCTTTCCATAAAGCTGAGAAAGTCACTTTATGGACTAAAATAATCTGGAAGGATGTGGTATAATCGTCTTAGTGAATACCTTGTGAAAGAAGGATTCAAAAACAACCAAATCAGTCCTTGTGTTTTCATTAAGCGATCCCAGTCAGGATTCGCTATCATTGCAGTATATGTGGATGATTTAAATATCATTGGAACTCCAAGAGAACTTGAACAAACTGCAAAATACTTGATGAAAGAATTTGAGATGAAAGATCTTGGAAAAACCAAATTTTGTCTTGGACTACAAATTGAGCACTTGAAAGAGGAATCTTTGATCATCAATCAAATTACACATAAAGGGTTCTAAAACGTTTTTACATGGACAAAGCACATCCAATGAATTCCCCTATGGTCGTTCGATCTTTGAATATGAAAGTTGACACATTCAGACCTCGAGATGAAAACGAAGAAATTCTTGGTCCTGAAGTACCATATCTAAGTGCAATTGGCGCTTTAATGTATTTAGCTAATAATACTAGACCCGATATTGCTTTTTTTGTGAACTTGTTAGCTAGGTATAGCAATTCGCCAACAAAGAGACATTGGAATGGGATAAGGCATTTATTCCGTTATCTACGAGGAGAACCAGATCTTGGTCTACTCTATCAGTCAAGAAAAGATGCTACTCTCATTGGATATGCAGATGCTGGATACTTATCGGATCCACAGAAGGGCAAGTCACAAACTGGATATTTGTTCACTTATGGAGGTACTGCAATATCCTGGAAATCAACTAAACAAACATTGACTGCTACATCATCAAATCATGCGGAATTAGTTGCTCCTTATGAAGCTGGACGAGTGTGTATGGCTCAGGCCAATGATCAGTAATATCCAAGAAGGATGTGGAATGAACTCAGTAACAGAAAATCCTACCATCATCTACGAAGACAATACTGCATGCATCGCACAAGTAACTGAAGGATACATCAAAGATGATCGAACAAAACACATATCTCCAAAGTTGTTCTTCACACACGATCTCCAGAAAGAAGGAACGATAAACGTCCAACAGATTCAATCGCGTGACAATCTTGCAGATTTGTTTACCAAATCTCTTCCTTCAAAGAGGTTTGAGCAGTTGATACACAAAATTGGAATGCGTCGTCTTCGTGAGCTATATTAAATTGAGGGGGAGTGTTACATGCACTGCACTCTTTTTCCCTTCGATCAGGTTTTTATCCCACTGGGTCTTTCCTGACAAGGTTTTTAATGAGGCAGTATGCAAAAGCATATAATCATAAAACTAGTACATCGTTAAGGATGGACATTCAAGGGGGAGTGTTAAGAGTCAAACATTTACACTAAAAAATGTGAATGTCCAACCTATCATTTAATGTATTGGCAAATTTTTTTGCCACCTACTCTAGGTAAACTAGCTAGTAGCTTGATATTGAATAGTGAAATCACCACTATAATTACCAATGCAAATCATTTGTAACAACTGAATACAAGCAATACATTTTACATAACCGAGAGTTGTATCATATCAGATATAAACTTTTGCTTATTTCCTATCACCTCACAACAATTGCAAATTTCAAAACAAAAGAAAAATAGTGGAGAGATTTTATATGTTTTGGTTTTTGAAATGTAAAGGAAGAAGAAGAAAAAAAGAAAAGGGAAAAGAAACGGGACAGGATTCGAAACAATTACAGACAAGAAGAAAAAGAAAAGGAAAATTATCAGTTAACAAGATTCGAAGCCGCGTCCTTGCTGTGCAACTGAAGTCTATAACCACTGAAGCGCCCAGATCATTTGTAACACCATGTCACCTTGACTTGAATTTATTCGGGTTATTTTTATAATTTATTATAACAGTCTTTTTTCCGGTTATAGTAAGGGTTCAGTTGAACCCACTGAACCCTTACTAGTGCCGCCAGCCACTGCTCTAAACATACTAATTATGCAATACCTACAGTACCCCTTCCCATAGGCCAGTTCATTATAGAATCCTCTGTTAATTAAAGAATACGATTTTCAGATCACTATCACAGTATGTGAACTCTATCAAAATACTTCCTTTTGACGTTAAATGGATGCTTAAGTTCTGTACTCTGAATGTTACTCTTGAAGGCATGTCTGTATGCTGTGTTATATAAGAAGTTGTAACTCAGAAGTGGTTTTGCGCATTTTCAGGTAACATATGAGGAATTCCGGCTCAGTGAGAAAGAGGCTGGTGATAACACCAAGTGGCTGAAAGAGGGCATGGAAGTCAATCTGCAGTTTTGGAATGGAAAAGTAATTATCCCCACCTATTGTGATTTCTGTTGTTTCCTTTGCAACTTCTCATCATTTTTTATGTTATGGCTTGTGGGAAACACCAAGATTTTGTCATGTAAATGTGATTCAGAAGTGGTCTCTATCTCTCTCTTGAGTCTTGGGACTTTCAGTTCTGATTTGTTATTTGAACAACTACTTGCAGGCAATTGATCTTGAGTTGCCCATCATTGTGAAGCTCACTGTTGTTGACACTGAACCTGGTATTAAGGGGGATTCAGCTCAAGGTATGTGATTTAATTTATCTTTTATACTCGCAACATAAAGTGAAAAAAGAAAATCACCCGCCCAATGTCCCTTTCATGTTCACAATTGAGACGAAAATGCTTGTAGAAACTGTTGGACTTTTTATGCACTTGGTTTTGCAGTTAACCTGATCTCGTTGAGTGTTCTGTATTTGGCTAATTGGTTTATATTGCATCTGCTAGTATTCCTTCTGGGGTACTAGTCCTAGGATTGTGTAAATGCTTATATTAGGATTTTCTCTGCACTACTAATTCAAATTTCATGCAATTTGGTCATATATTTTTTTTGTTTGTGATTCTCTTGCACTTTCGTAGTTTGAACAAGGGACTGAGGCAATTTGAACATATTTCAGGTTTAGGGTAAAGCCTATTGCTATCCCTTTTTTCTGAACAGTTACATTGATGGTGTTTGATTGTAGGTAGTACAAAACCAGCAACAGTTGACACTGGAGCAATTATTAACGTACCGTTGTTCATCAATATCGGTGATAATATTATGATTGATACAAGAACAGGGCAGTATTCTAGTCGTTCGTAATTAGTGTTTCAAACATATATCGGCACTAATGTAACTCAATACTTGGGAGTTTTTGTTGTATTTATGTGCATATTACTTGGACTCTATGTTCTGTAAATCAGAGGTTAGGGTTGTGTTCCTGATGCTGTTGAGATAGACAATGTATGTCACGGGAATCAGTTGGGATTATTTTTTGTAGAAATGTTGAAATGATTAATGCAGAAACTATCTAATGTATTTTACGTTTATTGTTTCTTCCTCCGAGATACCGAGGGTTGAATACATTTAAGCAACACAATTTTGAATTTTCCATTTGATAAGCTAAGGTACAAGAAAGCATCTGTCAATGTATAGTTCCTAAGCAATATGTAGTAGAAGAGAACTATATGTCTATACATACAATGGCGTTATGGTGATCTATTTTGTTGAGGATTCAAGGGCATCTGGTGTGGAATCATACCAAGCTTTAATGCTGCACCATACACACTGCAAGCACCAAGCAGAAACCCTTGCCTATTGA

mRNA sequence

CACTAACAAATATTTGATGGGCTTGCTCCAAAAACAACTGAAATTCCATTAGAAAAACATCAAATTTGGCATTTCTAATATTTCCTTATCATGAAAAATGGCCTAAGGTTCCACTGAACTCACCACCCTTCTCTCTCTTTCTCTCTCCAACTCAGACCAACAATGGCGGGAATAGCAACCATCAAGCTCTCCCAATCTCCTTCCATTCGCCCATCATCCGCTTCATTTTCATCCAACCCATCTTTGAAAGGCCTCAAACACTCCGTTGCACTACCCCGCCGCACTAGATTCTCTAAGATTTATGCTTTGAGTAGCAATGACATTAAGGTGGGTACTAGTCTTGAGGTGGATGGAGCTCCTTGGAAAGTCTTAGTTAATGGGTATCTTTATCTTGACAATGTACTGACTATTGATTCTTTACCCTGGAGGCTGAAACCTTTTTTCCTTGTAGAGTTTCTTCATGTGAAACCAGGAAAAGGGGCTGCTTTTGTGAGGACTAAAATGCGTAACTACGTGACGGGGAACACAGTTGAGAAGACCTTTAGAGCTGGAGTCTCGGTAACATATGAGGAATTCCGGCTCAGTGAGAAAGAGGCTGGTGATAACACCAAGTGGCTGAAAGAGGGCATGGAAGTCAATCTGCAGTTTTGGAATGGAAAAGCAATTGATCTTGAGTTGCCCATCATTGTGAAGCTCACTGTTGTTGACACTGAACCTGGTATTAAGGGGGATTCAGCTCAAGGTAGTACAAAACCAGCAACAGTTGACACTGGAGCAATTATTAACGTACCGTTGTTCATCAATATCGGTGATAATATTATGATTGATACAAGAACAGGGCAGTATTCTAGTCGTTCTAGAAGAGAACTATATGTCTATACATACAATGGCGTTATGGTGATCTATTTTGTTGAGGATTCAAGGGCATCTGGTGTGGAATCATACCAAGCTTTAATGCTGCACCATACACACTGCAAGCACCAAGCAGAAACCCTTGCCTATTGA

Coding sequence (CDS)

ATGGCGGGAATAGCAACCATCAAGCTCTCCCAATCTCCTTCCATTCGCCCATCATCCGCTTCATTTTCATCCAACCCATCTTTGAAAGGCCTCAAACACTCCGTTGCACTACCCCGCCGCACTAGATTCTCTAAGATTTATGCTTTGAGTAGCAATGACATTAAGGTGGGTACTAGTCTTGAGGTGGATGGAGCTCCTTGGAAAGTCTTAGTTAATGGGTATCTTTATCTTGACAATGTACTGACTATTGATTCTTTACCCTGGAGGCTGAAACCTTTTTTCCTTGTAGAGTTTCTTCATGTGAAACCAGGAAAAGGGGCTGCTTTTGTGAGGACTAAAATGCGTAACTACGTGACGGGGAACACAGTTGAGAAGACCTTTAGAGCTGGAGTCTCGGTAACATATGAGGAATTCCGGCTCAGTGAGAAAGAGGCTGGTGATAACACCAAGTGGCTGAAAGAGGGCATGGAAGTCAATCTGCAGTTTTGGAATGGAAAAGCAATTGATCTTGAGTTGCCCATCATTGTGAAGCTCACTGTTGTTGACACTGAACCTGGTATTAAGGGGGATTCAGCTCAAGGTAGTACAAAACCAGCAACAGTTGACACTGGAGCAATTATTAACGTACCGTTGTTCATCAATATCGGTGATAATATTATGATTGATACAAGAACAGGGCAGTATTCTAGTCGTTCTAGAAGAGAACTATATGTCTATACATACAATGGCGTTATGGTGATCTATTTTGTTGAGGATTCAAGGGCATCTGGTGTGGAATCATACCAAGCTTTAATGCTGCACCATACACACTGCAAGCACCAAGCAGAAACCCTTGCCTATTGA

Protein sequence

MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGVSVTYEEFRLSEKEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINVPLFINIGDNIMIDTRTGQYSSRSRRELYVYTYNGVMVIYFVEDSRASGVESYQALMLHHTHCKHQAETLAY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo15925	Spo15925	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo15925.1	Spo15925.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15925.1.utr5p.1	Spo15925.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15925.1.CDS.8	Spo15925.1.CDS.8	CDS
Spo15925.1.CDS.7	Spo15925.1.CDS.7	CDS
Spo15925.1.CDS.6	Spo15925.1.CDS.6	CDS
Spo15925.1.CDS.5	Spo15925.1.CDS.5	CDS
Spo15925.1.CDS.4	Spo15925.1.CDS.4	CDS
Spo15925.1.CDS.3	Spo15925.1.CDS.3	CDS
Spo15925.1.CDS.2	Spo15925.1.CDS.2	CDS
Spo15925.1.CDS.1	Spo15925.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15925.1.exon.8	Spo15925.1.exon.8	exon
Spo15925.1.exon.7	Spo15925.1.exon.7	exon
Spo15925.1.exon.6	Spo15925.1.exon.6	exon
Spo15925.1.exon.5	Spo15925.1.exon.5	exon
Spo15925.1.exon.4	Spo15925.1.exon.4	exon
Spo15925.1.exon.3	Spo15925.1.exon.3	exon
Spo15925.1.exon.2	Spo15925.1.exon.2	exon
Spo15925.1.exon.1	Spo15925.1.exon.1	exon

Homology

[Close]

BLAST of Spo15925.1 vs. NCBI nr
Match: gi|731344560|ref|XP_010683487.1| (PREDICTED: uncharacterized protein LOC104898155 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 328.9 bits (842), Expect = 8.400e-87
Identity = 175/258 (67.83%), Postives = 190/258 (73.64%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVGTSL 60
           MAGI+TIKLS SPSIR SS+  SSNPS KGL+HS+ LPRR RFSKIYALSSNDIKVG++L
Sbjct: 1   MAGISTIKLSLSPSIRSSSSLSSSNPSFKGLRHSIVLPRRNRFSKIYALSSNDIKVGSNL 60

Query: 61  EVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNYVTG 120
           EVDGAPWKVL                          EFLHVKPGKGAAFVRTKMRNYVTG
Sbjct: 61  EVDGAPWKVL--------------------------EFLHVKPGKGAAFVRTKMRNYVTG 120

Query: 121 NTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDNTKWLKE 180
           NTVEKTFRAGVS+                          TYEEFRL+EK+ GD TKWLKE
Sbjct: 121 NTVEKTFRAGVSIPEANVSKETKQFTYKDGNLYVFMDLTTYEEFRLNEKDVGDKTKWLKE 180

Query: 181 GMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINVPLFIN 233
           GM+ NLQFWNGK IDLELPIIVKL VVDTEPGIKGD+AQG +K ATVDTG I+NVPLFIN
Sbjct: 181 GMDCNLQFWNGKPIDLELPIIVKLKVVDTEPGIKGDTAQGGSKQATVDTGTIVNVPLFIN 232

[Close]

BLAST of Spo15925.1 vs. NCBI nr
Match: gi|719990829|ref|XP_010253077.1| (PREDICTED: uncharacterized protein LOC104594485 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 282.3 bits (721), Expect = 9.000e-73
Identity = 143/232 (61.64%), Postives = 171/232 (73.71%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVGTSL 60
           MAGIAT+ LS S  +R SS SFSS  S+  ++    +P R RF KI A SSNDIKVG+++
Sbjct: 1   MAGIATLGLSPSYCLRWSSVSFSSKTSVLPMRVLPRIPLRFRFPKILAFSSNDIKVGSNI 60

Query: 61  EVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNYVTG 120
           EVDGAPW+V                          +EFLHVKPGKGAAFVRTKMRNYVTG
Sbjct: 61  EVDGAPWRV--------------------------IEFLHVKPGKGAAFVRTKMRNYVTG 120

Query: 121 NTVEKTFRAGVSVTYEEFRLSEKEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTV 180
           N VEKTFRAG + TYEE RL+E + GD TKWLKEGM+ N+ FWNGK ID ELPI VKLTV
Sbjct: 121 NVVEKTFRAGSTNTYEETRLNESDVGDKTKWLKEGMDCNVLFWNGKVIDFELPITVKLTV 180

Query: 181 VDTEPGIKGDSAQGSTKPATVDTGAIINVPLFINIGDNIMIDTRTGQYSSRS 233
           VD +PG+KGD+AQG +KPAT+DTGA++NVPLF+NIG+ I++DTRTGQY SR+
Sbjct: 181 VDADPGVKGDTAQGGSKPATLDTGAVVNVPLFVNIGEEILVDTRTGQYMSRA 206

[Close]

BLAST of Spo15925.1 vs. NCBI nr
Match: gi|1021510664|ref|XP_016198612.1| (PREDICTED: elongation factor P [Arachis ipaensis])

HSP 1 Score: 270.4 bits (690), Expect = 3.500e-69
Identity = 147/264 (55.68%), Postives = 176/264 (66.67%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSP------SIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDI 60
           M GIA++KL  SP      +    S+SFSSNPSL  ++ + +    TRF +IYAL+SNDI
Sbjct: 1   MEGIASLKLKLSPFSSIMSTFTSPSSSFSSNPSLLPMR-TPSSSSTTRFLRIYALTSNDI 60

Query: 61  KVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKM 120
           KVGT+LEVDGAPW+VL                          EFLHVKPGKGAAFVRTK+
Sbjct: 61  KVGTNLEVDGAPWRVL--------------------------EFLHVKPGKGAAFVRTKL 120

Query: 121 RNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDN 180
           +NYVTGNTVEKTFRAG S+                          T+EE RL E E GD 
Sbjct: 121 KNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDK 180

Query: 181 TKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIIN 233
           TKWLKEGM+ NL FWNGK IDL+LPI VKLTVVD +PG+KGD+AQG +KPAT+DTGA++N
Sbjct: 181 TKWLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVN 237

[Close]

BLAST of Spo15925.1 vs. NCBI nr
Match: gi|719990826|ref|XP_010253076.1| (PREDICTED: uncharacterized protein LOC104594485 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 270.4 bits (690), Expect = 3.500e-69
Identity = 143/258 (55.43%), Postives = 172/258 (66.67%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVGTSL 60
           MAGIAT+ LS S  +R SS SFSS  S+  ++    +P R RF KI A SSNDIKVG+++
Sbjct: 1   MAGIATLGLSPSYCLRWSSVSFSSKTSVLPMRVLPRIPLRFRFPKILAFSSNDIKVGSNI 60

Query: 61  EVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNYVTG 120
           EVDGAPW+V                          +EFLHVKPGKGAAFVRTKMRNYVTG
Sbjct: 61  EVDGAPWRV--------------------------IEFLHVKPGKGAAFVRTKMRNYVTG 120

Query: 121 NTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDNTKWLKE 180
           N VEKTFRAG ++                          TYEE RL+E + GD TKWLKE
Sbjct: 121 NVVEKTFRAGSTINEANIVKEIKQYTYKDGSQFVFMDLNTYEETRLNESDVGDKTKWLKE 180

Query: 181 GMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINVPLFIN 233
           GM+ N+ FWNGK ID ELPI VKLTVVD +PG+KGD+AQG +KPAT+DTGA++NVPLF+N
Sbjct: 181 GMDCNVLFWNGKVIDFELPITVKLTVVDADPGVKGDTAQGGSKPATLDTGAVVNVPLFVN 232

[Close]

BLAST of Spo15925.1 vs. NCBI nr
Match: gi|1012116647|ref|XP_015961283.1| (PREDICTED: elongation factor P [Arachis duranensis])

HSP 1 Score: 270.4 bits (690), Expect = 3.500e-69
Identity = 147/264 (55.68%), Postives = 176/264 (66.67%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSP------SIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDI 60
           M GIA++KL  SP      +    S+SFSSNPSL  ++ + +    TRF +IYAL+SNDI
Sbjct: 1   MEGIASLKLKLSPFSSVMSTFTSPSSSFSSNPSLLPMR-TPSSSSTTRFLRIYALTSNDI 60

Query: 61  KVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKM 120
           KVGT+LEVDGAPW+VL                          EFLHVKPGKGAAFVRTK+
Sbjct: 61  KVGTNLEVDGAPWRVL--------------------------EFLHVKPGKGAAFVRTKL 120

Query: 121 RNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDN 180
           +NYVTGNTVEKTFRAG S+                          T+EE RL E E GD 
Sbjct: 121 KNYVTGNTVEKTFRAGSSIDEANVVKETKQFSYKDGSQYVFMDLNTFEESRLGESEVGDK 180

Query: 181 TKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIIN 233
           TKWLKEGM+ NL FWNGK IDL+LPI VKLTVVD +PG+KGD+AQG +KPAT+DTGA++N
Sbjct: 181 TKWLKEGMDCNLLFWNGKVIDLDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVN 237

[Close]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g156990 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.800e-87
Identity = 175/258 (67.83%), Postives = 190/258 (73.64%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVGTSL 60
           MAGI+TIKLS SPSIR SS+  SSNPS KGL+HS+ LPRR RFSKIYALSSNDIKVG++L
Sbjct: 1   MAGISTIKLSLSPSIRSSSSLSSSNPSFKGLRHSIVLPRRNRFSKIYALSSNDIKVGSNL 60

Query: 61  EVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNYVTG 120
           EVDGAPWKVL                          EFLHVKPGKGAAFVRTKMRNYVTG
Sbjct: 61  EVDGAPWKVL--------------------------EFLHVKPGKGAAFVRTKMRNYVTG 120

Query: 121 NTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDNTKWLKE 180
           NTVEKTFRAGVS+                          TYEEFRL+EK+ GD TKWLKE
Sbjct: 121 NTVEKTFRAGVSIPEANVSKETKQFTYKDGNLYVFMDLTTYEEFRLNEKDVGDKTKWLKE 180

Query: 181 GMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINVPLFIN 233
           GM+ NLQFWNGK IDLELPIIVKL VVDTEPGIKGD+AQG +K ATVDTG I+NVPLFIN
Sbjct: 181 GMDCNLQFWNGKPIDLELPIIVKLKVVDTEPGIKGDTAQGGSKQATVDTGTIVNVPLFIN 232

[Close]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Match: A0A0B2S8L6_GLYSO (Elongation factor P OS=Glycine soja GN=glysoja_001127 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.100e-68
Identity = 146/264 (55.30%), Postives = 173/264 (65.53%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRT------RFSKIYALSSNDI 60
           +AG AT+KLS S    P S +FS++ S   L     LP RT      RF +IYAL+SNDI
Sbjct: 2   VAGTATLKLSLSAFSSPMS-NFSASSSFPSL-----LPMRTPSSSKPRFLRIYALTSNDI 61

Query: 61  KVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKM 120
           KVGT+LEVDGAPW+VL                          EFLHVKPGKGAAFVRTKM
Sbjct: 62  KVGTNLEVDGAPWRVL--------------------------EFLHVKPGKGAAFVRTKM 121

Query: 121 RNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDN 180
           +NY+TGNTVEKTFRAG S+                          TYEEFRL EKE GD 
Sbjct: 122 KNYITGNTVEKTFRAGSSIEQADVFKETKQFTYKDGAQFVFMDLNTYEEFRLGEKEIGDR 181

Query: 181 TKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIIN 233
           TKWLKEGM+ NL  WNGK ID+ELPI +KL VVD +PG+KGD+AQG TKPAT+DTGA++N
Sbjct: 182 TKWLKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDPGLKGDTAQGGTKPATLDTGAVVN 233

[Close]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RTI2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G115100 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.400e-67
Identity = 147/270 (54.44%), Postives = 175/270 (64.81%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSP------SIRPSSASFSSNPSLKGLKHSVALPRRT------RFSKIYA 60
           +AGIA +KL+ S       S   SS+S SS PSL        LP RT      RF +IYA
Sbjct: 2   VAGIANLKLNLSAFSSSMSSFTASSSSSSSFPSL--------LPMRTPSSSKPRFFRIYA 61

Query: 61  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 120
           L+SNDIKVGT+LEVDGAPW+V                          +EFLHVKPGKGAA
Sbjct: 62  LTSNDIKVGTNLEVDGAPWRV--------------------------IEFLHVKPGKGAA 121

Query: 121 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 180
           FVRTK++NY+TGNTVEKTFRAG S+                          TYEEFRL E
Sbjct: 122 FVRTKLKNYITGNTVEKTFRAGSSIDLADVYKETKQFTYKDGAQFVFMDLSTYEEFRLGE 181

Query: 181 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 233
           KE GD TKWLKEGM+ NL  WNGK ID++LPI VKLTVVD +PG+KGD+AQG TKPAT+D
Sbjct: 182 KEIGDRTKWLKEGMDCNLLLWNGKVIDVDLPITVKLTVVDVDPGLKGDTAQGGTKPATLD 237

[Close]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Match: V7B5C9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G082900g PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.800e-67
Identity = 143/261 (54.79%), Postives = 172/261 (65.90%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSP---SIRPSSASFSSNPSLKGLKHSVALPRRTRFSKIYALSSNDIKVG 60
           +AG+AT+KL+ S    S+   +AS SS+  L  L        + RF +IYALSSNDIKVG
Sbjct: 2   VAGMATLKLNLSAFSSSMSSFTASSSSSSFLSLLPMRTPSSSKPRFFRIYALSSNDIKVG 61

Query: 61  TSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMRNY 120
           T+LEVDGAPW+V                          +EFLHVKPGKGAAFVRTKM+NY
Sbjct: 62  TNLEVDGAPWRV--------------------------IEFLHVKPGKGAAFVRTKMKNY 121

Query: 121 VTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDNTKW 180
           VTGNTVEKTFRAG S+                          TYEEFRL EKE GD TKW
Sbjct: 122 VTGNTVEKTFRAGSSIDQADIYKETKQFTYKDGAQFVFMDLSTYEEFRLGEKEIGDRTKW 181

Query: 181 LKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINVPL 233
           LKEGM+  L  WNGK ID++LPI VKLTVVD +PG+KGD+AQG TKPAT+DTGA++NVPL
Sbjct: 182 LKEGMDCTLLLWNGKVIDVDLPITVKLTVVDVDPGLKGDTAQGGTKPATLDTGAVVNVPL 236

[Close]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Match: I1N388_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G213900 PE=3 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 2.300e-67
Identity = 145/264 (54.92%), Postives = 172/264 (65.15%), Query Frame = 1


		  
Query: 1   MAGIATIKLSQSPSIRPSSASFSSNPSLKGLKHSVALPRRT------RFSKIYALSSNDI 60
           +AG AT+KLS S    P S +FS++ S         LP RT      RF +IYAL+SNDI
Sbjct: 2   VAGTATLKLSLSAFSSPMS-NFSASSSFPS-----RLPMRTPSSSKPRFLRIYALTSNDI 61

Query: 61  KVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKM 120
           KVGT+LEVDGAPW+VL                          EFLHVKPGKGAAFVRTKM
Sbjct: 62  KVGTNLEVDGAPWRVL--------------------------EFLHVKPGKGAAFVRTKM 121

Query: 121 RNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDN 180
           +NY+TGNTVEKTFRAG S+                          TYEEFRL EKE GD 
Sbjct: 122 KNYITGNTVEKTFRAGSSIEQADVFKETKQFTYKDGAQFVFMDLNTYEEFRLGEKEIGDR 181

Query: 181 TKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIIN 233
           TKWLKEGM+ NL  WNGK ID+ELPI +KL VVD +PG+KGD+AQG TKPAT+DTGA++N
Sbjct: 182 TKWLKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDPGLKGDTAQGGTKPATLDTGAVVN 233

[Close]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Match: EFP_SYNP2 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=efp PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.700e-45
Identity = 100/209 (47.85%), Postives = 124/209 (59.33%), Query Frame = 1


		  
Query: 49  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 108
           +SSND + GTS+E+DG+ W+V                          VEFLHVKPGKG+A
Sbjct: 2   ISSNDFRTGTSIELDGSVWRV--------------------------VEFLHVKPGKGSA 61

Query: 109 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 168
           FVRTK++N  TG+ VEKTFRAG +V                          TYEE RL+E
Sbjct: 62  FVRTKLKNAQTGSVVEKTFRAGETVPQAILDKRTMQHTYKEGEQFVFMDMETYEEVRLTE 121

Query: 169 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 228
            + GD  K+L E MEVN+ FWN + ID+ELP  V L V +T+PG+KGD+A G TKPA V 
Sbjct: 122 AQIGDRVKYLMEEMEVNVLFWNSQVIDVELPNTVVLEVTETDPGVKGDTATGGTKPAIVS 181

Query: 229 TGAIINVPLFINIGDNIMIDTRTGQYSSR 232
           TGA +NVPLFI+IG+ I IDTRT  Y  R
Sbjct: 182 TGAQVNVPLFISIGERIKIDTRTDTYLGR 184

[Close]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Match: EFP_MICAN (Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) GN=efp PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.900e-44
Identity = 94/209 (44.98%), Postives = 124/209 (59.33%), Query Frame = 1


		  
Query: 49  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 108
           +SSND + GT++E+DG+ W+V                          VEFLHVKPGKG+A
Sbjct: 2   ISSNDFRSGTTIEIDGSVWRV--------------------------VEFLHVKPGKGSA 61

Query: 109 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 168
           FVRTK++N  TGN VE+TFRAG ++                          T+EE  L+ 
Sbjct: 62  FVRTKLKNVQTGNVVERTFRAGETLPSATIEKRTMQHTYKEGDQFVFMDMETFEEATLTP 121

Query: 169 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 228
            + GD  K+LKEGMEVN+ FWN + +D+ELP  V L + DT+PG+KGD+A G TKPA V+
Sbjct: 122 VQMGDRAKYLKEGMEVNILFWNDQVLDIELPTSVILEITDTDPGVKGDTATGGTKPAIVE 181

Query: 229 TGAIINVPLFINIGDNIMIDTRTGQYSSR 232
           TGA + VPLFI+IG+ I +DTR G Y  R
Sbjct: 182 TGAQVMVPLFISIGERIKVDTRDGSYLGR 184

[Close]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Match: EFP_SYNP6 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=efp PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.900e-44
Identity = 97/209 (46.41%), Postives = 123/209 (58.85%), Query Frame = 1


		  
Query: 49  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 108
           +SSND + GT++E+DGA W+V                          VEFLHVKPGKG+A
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRV--------------------------VEFLHVKPGKGSA 61

Query: 109 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 168
           FVRTK++N  TGN VEKTFRAG +V                          TYEE RL+ 
Sbjct: 62  FVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTA 121

Query: 169 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 228
              GD  K+LKEGME N+  WNG+ I++ELP  V L V++T+PG+KGD+A G TKPA V+
Sbjct: 122 ATIGDRVKYLKEGMEANVITWNGQVIEVELPNSVVLEVIETDPGVKGDTATGGTKPAKVE 181

Query: 229 TGAIINVPLFINIGDNIMIDTRTGQYSSR 232
           TGA + VPLFI++G+ I IDTR   Y  R
Sbjct: 182 TGAQVMVPLFISVGERIKIDTRNDSYLGR 184

[Close]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Match: EFP_SYNE7 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942) GN=efp PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.900e-44
Identity = 97/209 (46.41%), Postives = 123/209 (58.85%), Query Frame = 1


		  
Query: 49  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 108
           +SSND + GT++E+DGA W+V                          VEFLHVKPGKG+A
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRV--------------------------VEFLHVKPGKGSA 61

Query: 109 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 168
           FVRTK++N  TGN VEKTFRAG +V                          TYEE RL+ 
Sbjct: 62  FVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTA 121

Query: 169 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 228
              GD  K+LKEGME N+  WNG+ I++ELP  V L V++T+PG+KGD+A G TKPA V+
Sbjct: 122 ATIGDRVKYLKEGMEANVITWNGQVIEVELPNSVVLEVIETDPGVKGDTATGGTKPAKVE 181

Query: 229 TGAIINVPLFINIGDNIMIDTRTGQYSSR 232
           TGA + VPLFI++G+ I IDTR   Y  R
Sbjct: 182 TGAQVMVPLFISVGERIKIDTRNDSYLGR 184

[Close]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Match: EFP_SYNJB (Elongation factor P OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=efp PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.700e-42
Identity = 93/209 (44.50%), Postives = 123/209 (58.85%), Query Frame = 1


		  
Query: 49  LSSNDIKVGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAA 108
           +SSND++ G S+E+DGAP+KV                          +EFLHVKPGKGAA
Sbjct: 2   ISSNDLRPGVSVEIDGAPYKV--------------------------IEFLHVKPGKGAA 61

Query: 109 FVRTKMRNYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSE 168
           FVRTK++N  TGN VEKTFRAG ++                          TYE+  ++ 
Sbjct: 62  FVRTKLKNMQTGNVVEKTFRAGETLPAATIEKVEMQYLYAEGNNLVFMDMETYEQAPITA 121

Query: 169 KEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVD 228
            + G   K+LKE M+V++  WNG+ ID+ELP  V L VV+T+PG+KGD+A G TKPA ++
Sbjct: 122 AQIGSAVKYLKENMQVSILRWNGQVIDVELPNTVVLEVVETDPGVKGDTATGGTKPAKLE 181

Query: 229 TGAIINVPLFINIGDNIMIDTRTGQYSSR 232
           TGA I VPLFI +G+ I +DTRT  Y  R
Sbjct: 182 TGAEIQVPLFIKVGERIRVDTRTDTYLGR 184

[Close]

BLAST of Spo15925.1 vs. TAIR (Arabidopsis)
Match: AT3G08740.1 (elongation factor P (EF-P) family protein)

HSP 1 Score: 221.5 bits (563), Expect = 6.600e-58
Identity = 128/263 (48.67%), Postives = 163/263 (61.98%), Query Frame = 1


		  
Query: 1   MAG--IATIKLSQSPS--IRPSSASFSSNPSLKGLKHSVALPRRTRFSKIY-ALSSNDIK 60
           MAG  I ++  S +PS  I  S+ASFSS   L  L      PR  RF +I+ ++S+NDIK
Sbjct: 1   MAGRAIFSVSCSSTPSLCIPYSTASFSSMNRL-ALPAVRISPRTNRFPRIHCSMSANDIK 60

Query: 61  VGTSLEVDGAPWKVLVNGYLYLDNVLTIDSLPWRLKPFFLVEFLHVKPGKGAAFVRTKMR 120
            GT++EVDGAPW+VL                          EFLHVKPGKGAAFVRTK+R
Sbjct: 61  AGTNIEVDGAPWRVL--------------------------EFLHVKPGKGAAFVRTKIR 120

Query: 121 NYVTGNTVEKTFRAGVSV--------------------------TYEEFRLSEKEAGDNT 180
           NYV G+TVE+TFRAG+SV                          TYEE RL+E + G+ T
Sbjct: 121 NYVNGSTVERTFRAGISVEEANIYKETKQFTYKDGSQFVFMDLTTYEETRLNESDMGEKT 180

Query: 181 KWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTEPGIKGDSAQGSTKPATVDTGAIINV 233
           KWLKEGM+  L +W  K ID +LPI VKL VVD +PG++GD+ QG +KPAT++TGAI+ V
Sbjct: 181 KWLKEGMDCILLYWKDKVIDFDLPITVKLKVVDVDPGLRGDTVQGGSKPATMETGAIVAV 236

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BLAST of Spo15925.1 vs. TAIR (Arabidopsis)
Match: AT4G26310.2 (elongation factor P (EF-P) family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.400e-7
Identity = 38/143 (26.57%), Postives = 67/143 (46.85%), Query Frame = 1


		  
Query: 91  KPFFLVEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGVSV----------------- 150
           + F +VE  H + G+G A ++ ++R+  TGN +   F +  SV                 
Sbjct: 89  RTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEG 148

Query: 151 ---------TYEEFRLSEKEAGDNTKWLKEGMEVNLQFWNGKAIDLELPIIVKLTVVDTE 208
                    T+E+  +     G    +LKE M+V LQ ++G+A+   +P  +  TVV+T+
Sbjct: 149 DTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIPKHITCTVVETQ 208

The following BLAST results are available for this feature:

BLAST of Spo15925.1 vs. NCBI nr
BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
BLAST of Spo15925.1 vs. TAIR (Arabidopsis)

BLAST of Spo15925.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731344560\|ref\|XP_010683487.1\|	8.4e-87	67.8	PREDICTED: uncharacterized pro...	[more]
gi\|719990829\|ref\|XP_010253077.1\|	9.0e-73	61.6	PREDICTED: uncharacterized pro...	[more]
gi\|1021510664\|ref\|XP_016198612.1\|	3.5e-69	55.6	PREDICTED: elongation factor P...	[more]
gi\|719990826\|ref\|XP_010253076.1\|	3.5e-69	55.4	PREDICTED: uncharacterized pro...	[more]
gi\|1012116647\|ref\|XP_015961283.1\|	3.5e-69	55.6	PREDICTED: elongation factor P...	[more]

BLAST of Spo15925.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BYF1_BETVU	5.8e-87	67.8	Uncharacterized protein OS=Bet...	[more]
A0A0B2S8L6_GLYSO	6.1e-68	55.3	Elongation factor P OS=Glycine...	[more]
A0A0S3RTI2_PHAAN	1.4e-67	54.4	Uncharacterized protein OS=Vig...	[more]
V7B5C9_PHAVU	1.8e-67	54.7	Uncharacterized protein OS=Pha...	[more]
I1N388_SOYBN	2.3e-67	54.9	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo15925.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EFP_SYNP2	2.7e-45	47.8	Elongation factor P OS=Synecho...	[more]
EFP_MICAN	3.9e-44	44.9	Elongation factor P OS=Microcy...	[more]
EFP_SYNP6	3.9e-44	46.4	Elongation factor P OS=Synecho...	[more]
EFP_SYNE7	3.9e-44	46.4	Elongation factor P OS=Synecho...	[more]
EFP_SYNJB	3.7e-42	44.5	Elongation factor P OS=Synecho...	[more]

BLAST of Spo15925.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G08740.1	6.6e-58	48.6	elongation factor P (EF-P) fam...	[more]
AT4G26310.2	1.4e-7	26.5	elongation factor P (EF-P) fam...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 134..168 score: 3.3
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 132..168 score: 6.
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 91..133 score: 1.44
IPR011768	Translation elongation factor P	HAMAP	MF_00141	EF_P	coord: 48..232 score: 35
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 176..231 score: 2.1E-27coord: 134..173 score: 1.0
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 176..231 score: 5.14E-17coord: 134..176 score: 1.9
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 91..132 score: 6.2
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 197..216 scor
IPR014722	Ribosomal protein L2 domain 2	GENE3D	2.30.30.30		coord: 50..133 score: 1.8
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 176..231 score: 1.1
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 176..231 score: 2.9
None	No IPR available	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 97..233 score: 1.4E-109coord: 6..70 score: 1.4E
None	No IPR available	PANTHER	PTHR30053:SF3	ELONGATION FACTOR EF-P	coord: 6..70 score: 1.4E-109coord: 97..233 score: 1.4E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043043	peptide biosynthetic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0006448	regulation of translational elongation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003746	translation elongation factor activity