Spo15955.1 (mRNA) | SpinachBase

Overview


Name	Spo15955.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Location	chr1 : 20818369 .. 20819879 (+)
Sequence length	1169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATTTTGAGGAGCTTCGGGGAATGTTATGTTATTCTCACTATGACGATACTGATTTCAGTTCTAACAATTTGGAAGAAATAGCTAGTCAGTTGGAAAATCTTATTGGTATTCTCAATTTTGTGAGTAGTTTGAAGGACGAGGGCAACAACTTCTACATACAAAATGCTACTAGTTTGGCTATTTCAAAATACTCTTTTGCTCTCAAGATCTTGTCATTTGTATTGGTTAGTAATGATGGGGATAAGTCCGTTTTTTCTGCTCTTGCTGTGTCCCTTAATTTGAACTTGGGTGCTTGTTTTATCAAGGAGAGAGACTTTGACAAAGTGGGTCAGTTATGTTAAGCAGTGTTGTGTTATGATCGTGTTAATGTGAAAGCTTTCTTTAGGAGGGTTTGTGGCAGCTATGGAGCTCAAAAAACCAAATTTAGCTTTCAGGGATCTTGCACAAGCACTCCAGATTGACCCCAAAAACAAAGAATTTCAGTTGAAGCTTAAGGAGGTGACTTCTTTATTGGGCTGGTCCCCAGATTTGTGGAAGATGCACTTGAAGCAGTTCGAGATGATGAGTTGTCTATGGGCAATGTCCAAAAGGAGAAAAAGGAAGAAAAAAAAAGAAAGGAAGGAAAGAAAAGAAAGAAAGATGGTGACAAAAATGAAGGAGGGCTACTCACAGGTGTTCTGGTGTTAAAGATGACACCTAAAAGGAAAAGAATGTTGTAGGCAAATCTTTGGATTTGGAGGGTAATATCAACTCTTCTAATCAAGATCAAAGGCCCAACATTAATGATAACAATTCAGTTCTGAAGTCGTCTCCAGAAACAAAAAAACCCCAAACTTGCAGGGTCCGGGTTTCAGTTTTCAAATCGAAAACGAATGTATTCCTTTTTTGCATCTCAGTCCATCCATGTATGGAGAGATTTCCAAGGGAAGAACACTAATTTCTATTGTTCTTTTCAGAAGAAGATAATTAGCATTCGAGTCCTCGATCCATCAAGGAAGATGGATTGTGGTGAAAAGAAGGTAATACACAAATGGAGATTAGTCACCCCCCAGTTGAAGGACATGATAGGTGTGAAACTGGCGCAAGAAGATCTAGCTACAAGTGTGGCAATTCAAGCGTCAGCGCGTGAAGCTACGTCATATTTGATACTTCCACAATCAGAAGCTCCGTCCTCGTTGAATCATCTTGTTCATCCTTCCACTTCCTCCTCTCAAAATCTTATGATGACTGCCTCTTCTCACTCCCGTCCCAGGTCAAGAAGAATGAATGGAACTTTAAAAGGTAGAAGCTCCTCTATTTTTACTAACACTTGATTTTGCAGGATGAGTATCGGTTCCAAAAGAAGTTCGTCTTACCTAATAGGGGACCCTTAGTATCTTGTTAGAAAGAAAGTCTATGGTCCTACACCCTGTGTTTTAAGTTGTAATGTAGTTCCTGATTAATTTATGCAATGAAGATTTTGTCAAAAAATAAAATGAAATTGGTTAATATTTTTGTAAGGGGA

mRNA sequence

ATGAATAATTTTGAGGAGCTTCGGGGAATGTTATGTTATTCTCACTATGACGATACTGATTTCAGTTCTAACAATTTGGAAGAAATAGCTAGTCAGTTGGAAAATCTTATTGGTATTCTCAATTTTGTGAGTAGTTTGAAGGACGAGGGCAACAACTTCTACATACAAAATGCTACTAGTTTGGCTATTTCAAAATACTCTTTTGCTCTCAAGATCTTGTCATTTGTATTGGTTAGTAATGATGGGGATAAGTCCGTTTTTTCTGCTCTTGCTGTGTCCCTTAATTTGAACTTGGGTGCTTGTTTTATCAAGGAGAGAGACTTTGACAAAGTGGGAGGGTTTGTGGCAGCTATGGAGCTCAAAAAACCAAATTTAGCTTTCAGGGATCTTGCACAAGCACTCCAGATTGACCCCAAAAACAAAGAATTTCAGTTGAAGCTTAAGGAGGTGACTTCTTTATTGGGCTGGTCCCCAGATTTGTGGAAGATGCACTTGAAGCAGTTCGAGATGATGAGTTGTCTATGGGCAATGTCCAAAAGGAGAAAAAGGAAGAAAAAAAAAGAAAGGAAGGAAAGAAAAGAAAGAAAGATGGTGACAAAAATGAAGGAGGGCTACTCACAGAAGAAGATAATTAGCATTCGAGTCCTCGATCCATCAAGGAAGATGGATTGTGGTGAAAAGAAGGTAATACACAAATGGAGATTAGTCACCCCCCAGTTGAAGGACATGATAGGTGTGAAACTGGCGCAAGAAGATCTAGCTACAAGTGTGGCAATTCAAGCGTCAGCGCGTGAAGCTACGTCATATTTGATACTTCCACAATCAGAAGCTCCGTCCTCGTTGAATCATCTTGTTCATCCTTCCACTTCCTCCTCTCAAAATCTTATGATGACTGCCTCTTCTCACTCCCGTCCCAGGTCAAGAAGAATGAATGGAACTTTAAAAGGTAGAAGCTCCTCTATTTTTACTAACACTTGATTTTGCAGGATGAGTATCGGTTCCAAAAGAAGTTCGTCTTACCTAATAGGGGACCCTTAGTATCTTGTTAGAAAGAAAGTCTATGGTCCTACACCCTGTGTTTTAAGTTGTAATGTAGTTCCTGATTAATTTATGCAATGAAGATTTTGTCAAAAAATAAAATGAAATTGGTTAATATTTTTGTAAGGGGA

Coding sequence (CDS)

ATGAATAATTTTGAGGAGCTTCGGGGAATGTTATGTTATTCTCACTATGACGATACTGATTTCAGTTCTAACAATTTGGAAGAAATAGCTAGTCAGTTGGAAAATCTTATTGGTATTCTCAATTTTGTGAGTAGTTTGAAGGACGAGGGCAACAACTTCTACATACAAAATGCTACTAGTTTGGCTATTTCAAAATACTCTTTTGCTCTCAAGATCTTGTCATTTGTATTGGTTAGTAATGATGGGGATAAGTCCGTTTTTTCTGCTCTTGCTGTGTCCCTTAATTTGAACTTGGGTGCTTGTTTTATCAAGGAGAGAGACTTTGACAAAGTGGGAGGGTTTGTGGCAGCTATGGAGCTCAAAAAACCAAATTTAGCTTTCAGGGATCTTGCACAAGCACTCCAGATTGACCCCAAAAACAAAGAATTTCAGTTGAAGCTTAAGGAGGTGACTTCTTTATTGGGCTGGTCCCCAGATTTGTGGAAGATGCACTTGAAGCAGTTCGAGATGATGAGTTGTCTATGGGCAATGTCCAAAAGGAGAAAAAGGAAGAAAAAAAAAGAAAGGAAGGAAAGAAAAGAAAGAAAGATGGTGACAAAAATGAAGGAGGGCTACTCACAGAAGAAGATAATTAGCATTCGAGTCCTCGATCCATCAAGGAAGATGGATTGTGGTGAAAAGAAGGTAATACACAAATGGAGATTAGTCACCCCCCAGTTGAAGGACATGATAGGTGTGAAACTGGCGCAAGAAGATCTAGCTACAAGTGTGGCAATTCAAGCGTCAGCGCGTGAAGCTACGTCATATTTGATACTTCCACAATCAGAAGCTCCGTCCTCGTTGAATCATCTTGTTCATCCTTCCACTTCCTCCTCTCAAAATCTTATGATGACTGCCTCTTCTCACTCCCGTCCCAGGTCAAGAAGAATGAATGGAACTTTAAAAGGTAGAAGCTCCTCTATTTTTACTAACACTTGA

Protein sequence

MNNFEELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATSLAISKYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGFVAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMKEGYSQKKIISIRVLDPSRKMDCGEKKVIHKWRLVTPQLKDMIGVKLAQEDLATSVAIQASAREATSYLILPQSEAPSSLNHLVHPSTSSSQNLMMTASSHSRPRSRRMNGTLKGRSSSIFTNT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo15955	Spo15955	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo15955.1	Spo15955.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15955.1.exon.1	Spo15955.1.exon.1	exon
Spo15955.1.exon.2	Spo15955.1.exon.2	exon
Spo15955.1.exon.3	Spo15955.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15955.1.CDS.1	Spo15955.1.CDS.1	CDS
Spo15955.1.CDS.2	Spo15955.1.CDS.2	CDS
Spo15955.1.CDS.3	Spo15955.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15955.1.utr3p.1	Spo15955.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo15955.1 vs. NCBI nr
Match: gi|902195666|gb|KNA12920.1| (hypothetical protein SOVF_122040 [Spinacia oleracea])

HSP 1 Score: 172.6 bits (436), Expect = 1.200e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

		  
Query: 118 MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM 177
           MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM
Sbjct: 1   MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM 60

Query: 178 SKRRKRKKKKERKERKERKMVTKMKEGYSQ 208
           SKRRKRKKKKERKERKERKMVTKMKEGYSQ
Sbjct: 61  SKRRKRKKKKERKERKERKMVTKMKEGYSQ 90

[Close]

BLAST of Spo15955.1 vs. NCBI nr
Match: gi|870868669|gb|KMT19472.1| (hypothetical protein BVRB_1g010990 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 147.1 bits (370), Expect = 5.200e-32
Identity = 94/212 (44.34%), Postives = 126/212 (59.43%), Query Frame = 1

		  
Query: 1   MNNFEELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATS 60
           MN  +EL+G LC  H+D+ D+SS +  +  + L N  GI  +V SLK EGN FY  +   
Sbjct: 1   MNTIDELKGELCLYHFDEHDYSSTSWVQRIANLVNPFGIFEYVRSLKVEGNIFYRNSDIK 60

Query: 61  LAISKYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF------ 120
            AI+ Y  A+K L FV V+N+ +KSVF +LA+S+NLNL ACFIKE+DF KVG        
Sbjct: 61  SAIAHYIQAIKFLFFVDVNNEEEKSVFLSLALSINLNLAACFIKEKDFQKVGELCSLVLM 120

Query: 121 -------------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP--- 180
                        +AA+EL +P++A  DL QAL+I P N EFQ KL EV+SLLG SP   
Sbjct: 121 YEATNAKAYFRRAIAALELSQPDIALIDLIQALKIHPNNGEFQQKLNEVSSLLGLSPNFV 180

Query: 181 DLWKMHLKQFEMMSCLWAMSKRRKRKKKKERK 191
           D     + + E++S    + K  KR+K  ERK
Sbjct: 181 DTTAKGVGEDEVLSNSSILGKEEKRRKVGERK 212

[Close]

BLAST of Spo15955.1 vs. NCBI nr
Match: gi|870843414|gb|KMS96588.1| (hypothetical protein BVRB_8g201580 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 138.7 bits (348), Expect = 1.900e-29
Identity = 97/231 (41.99%), Postives = 132/231 (57.14%), Query Frame = 1

		  
Query: 1   MNNFEELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATS 60
           MNN +EL+G LC  H+D+ D SS +  +    + N  GI  +  SLK EGN FY +N   
Sbjct: 1   MNNMDELKGELCLYHFDELDCSSTSWVQRLDFVINPFGIFEYARSLKVEGNTFYRKNDFK 60

Query: 61  LAISKYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF------ 120
            AIS+YS A+K L F  V+N+ DKSVF +LA+S+NLNL ACFIKE++F KVG        
Sbjct: 61  SAISQYSQAIKFLFFADVTNEEDKSVFLSLALSINLNLAACFIKEKNFQKVGELCSLVLM 120

Query: 121 -------------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP--- 180
                        VAA+EL +P++A  DL QAL+I P N EFQ KL EV+S+LG S    
Sbjct: 121 YDATNAKAYFRRAVAALELSQPDIALIDLIQALKIHPNNGEFQQKLNEVSSVLGLSSNFV 180

Query: 181 DLWKMHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMK-EGYSQK 209
           D+      + E++       K  KR+K  ERK  +    ++  K + +SQK
Sbjct: 181 DISAQVAGKDEVLGKSSLFGKEEKRRKVGERKSYEGTTTISVEKNQTFSQK 231

[Close]

BLAST of Spo15955.1 vs. NCBI nr
Match: gi|870842037|gb|KMS95551.1| (hypothetical protein BVRB_007140 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 127.9 bits (320), Expect = 3.300e-26
Identity = 89/232 (38.36%), Postives = 128/232 (55.17%), Query Frame = 1

		  
Query: 5   EELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATSLAIS 64
           +EL+G LC  H+D+ D SS+N  +    L N  GI  +  SLK EGN FY  N    AI+
Sbjct: 2   DELKGDLCLYHFDELDCSSSNWVQRLDFLINPFGIFEYAQSLKAEGNTFYRNNDLKSAIA 61

Query: 65  KYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF---------- 124
            Y  A+K L F  + N+ +K V  +LA+S+NLNL ACF KE+DF KVG            
Sbjct: 62  HYFQAIKFLFFADIDNEEEKFVILSLALSINLNLAACFTKEKDFQKVGELCSLVLMYDAT 121

Query: 125 ---------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP---DLWK 184
                    VAA+EL +P++A  DL QAL++ P N EFQ K  EV+S+LG S    D+  
Sbjct: 122 NAKAYFRRAVAALELSQPDIALLDLVQALKLHPNNGEFQQKFNEVSSMLGLSSTYVDINA 181

Query: 185 MHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMK-EGYSQKKIISI 214
             + + E++S    + K  KR+K  ERK  +    +T  K + +S+K  +++
Sbjct: 182 QIVGEDEVLSKSSLLGKEEKRRKVGERKSYQGTTTITVEKNQTFSEKVTMNV 233

[Close]

BLAST of Spo15955.1 vs. NCBI nr
Match: gi|731326579|ref|XP_010674091.1| (PREDICTED: uncharacterized protein LOC104890345 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.7 bits (317), Expect = 7.300e-26
Identity = 90/222 (40.54%), Postives = 121/222 (54.50%), Query Frame = 1

		  
Query: 5   EELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATSLAIS 64
           +EL+G LC  H+D+ D SS N  +    L N  GI ++  SLK EGN FY  N    AI+
Sbjct: 2   DELKGDLCLYHFDELDCSSTNWVQRLDFLINPFGIFDYARSLKAEGNTFYRNNDIRSAIA 61

Query: 65  KYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF---------- 124
            Y+ A+K L F  V+N+ +KSVF +LA+S+NLNL ACF KE+DF KVG            
Sbjct: 62  HYTQAIKFLYFADVNNEEEKSVFLSLALSINLNLAACFTKEKDFQKVGELCSLVLMYDAT 121

Query: 125 ---------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHL 184
                    VAA+EL +P++A  DL QAL+  P N EFQ K  EV S LG S +      
Sbjct: 122 NAKAFFRRAVAALELSQPDIALLDLTQALKFHPNNGEFQQKFNEVLSTLGMSSNFVDFK- 181

Query: 185 KQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMKEGYSQ 208
            Q   M  + + S   K +K+++  ERK  +  T  KE  +Q
Sbjct: 182 DQTVGMDEVCSSSFLGKEEKRRKVGERKSYQGTTTTKEEKNQ 222

[Close]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R075_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122040 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.100e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

		  
Query: 118 MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM 177
           MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM
Sbjct: 1   MELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSPDLWKMHLKQFEMMSCLWAM 60

Query: 178 SKRRKRKKKKERKERKERKMVTKMKEGYSQ 208
           SKRRKRKKKKERKERKERKMVTKMKEGYSQ
Sbjct: 61  SKRRKRKKKKERKERKERKMVTKMKEGYSQ 90

[Close]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D104_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g010990 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.600e-32
Identity = 94/212 (44.34%), Postives = 126/212 (59.43%), Query Frame = 1

		  
Query: 1   MNNFEELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATS 60
           MN  +EL+G LC  H+D+ D+SS +  +  + L N  GI  +V SLK EGN FY  +   
Sbjct: 1   MNTIDELKGELCLYHFDEHDYSSTSWVQRIANLVNPFGIFEYVRSLKVEGNIFYRNSDIK 60

Query: 61  LAISKYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF------ 120
            AI+ Y  A+K L FV V+N+ +KSVF +LA+S+NLNL ACFIKE+DF KVG        
Sbjct: 61  SAIAHYIQAIKFLFFVDVNNEEEKSVFLSLALSINLNLAACFIKEKDFQKVGELCSLVLM 120

Query: 121 -------------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP--- 180
                        +AA+EL +P++A  DL QAL+I P N EFQ KL EV+SLLG SP   
Sbjct: 121 YEATNAKAYFRRAIAALELSQPDIALIDLIQALKIHPNNGEFQQKLNEVSSLLGLSPNFV 180

Query: 181 DLWKMHLKQFEMMSCLWAMSKRRKRKKKKERK 191
           D     + + E++S    + K  KR+K  ERK
Sbjct: 181 DTTAKGVGEDEVLSNSSILGKEEKRRKVGERK 212

[Close]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9D0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g201580 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.300e-29
Identity = 97/231 (41.99%), Postives = 132/231 (57.14%), Query Frame = 1

		  
Query: 1   MNNFEELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATS 60
           MNN +EL+G LC  H+D+ D SS +  +    + N  GI  +  SLK EGN FY +N   
Sbjct: 1   MNNMDELKGELCLYHFDELDCSSTSWVQRLDFVINPFGIFEYARSLKVEGNTFYRKNDFK 60

Query: 61  LAISKYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF------ 120
            AIS+YS A+K L F  V+N+ DKSVF +LA+S+NLNL ACFIKE++F KVG        
Sbjct: 61  SAISQYSQAIKFLFFADVTNEEDKSVFLSLALSINLNLAACFIKEKNFQKVGELCSLVLM 120

Query: 121 -------------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP--- 180
                        VAA+EL +P++A  DL QAL+I P N EFQ KL EV+S+LG S    
Sbjct: 121 YDATNAKAYFRRAVAALELSQPDIALIDLIQALKIHPNNGEFQQKLNEVSSVLGLSSNFV 180

Query: 181 DLWKMHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMK-EGYSQK 209
           D+      + E++       K  KR+K  ERK  +    ++  K + +SQK
Sbjct: 181 DISAQVAGKDEVLGKSSLFGKEEKRRKVGERKSYEGTTTISVEKNQTFSQK 231

[Close]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B3J8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007140 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.300e-26
Identity = 89/232 (38.36%), Postives = 128/232 (55.17%), Query Frame = 1

		  
Query: 5   EELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATSLAIS 64
           +EL+G LC  H+D+ D SS+N  +    L N  GI  +  SLK EGN FY  N    AI+
Sbjct: 2   DELKGDLCLYHFDELDCSSSNWVQRLDFLINPFGIFEYAQSLKAEGNTFYRNNDLKSAIA 61

Query: 65  KYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF---------- 124
            Y  A+K L F  + N+ +K V  +LA+S+NLNL ACF KE+DF KVG            
Sbjct: 62  HYFQAIKFLFFADIDNEEEKFVILSLALSINLNLAACFTKEKDFQKVGELCSLVLMYDAT 121

Query: 125 ---------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP---DLWK 184
                    VAA+EL +P++A  DL QAL++ P N EFQ K  EV+S+LG S    D+  
Sbjct: 122 NAKAYFRRAVAALELSQPDIALLDLVQALKLHPNNGEFQQKFNEVSSMLGLSSTYVDINA 181

Query: 185 MHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMK-EGYSQKKIISI 214
             + + E++S    + K  KR+K  ERK  +    +T  K + +S+K  +++
Sbjct: 182 QIVGEDEVLSKSSLLGKEEKRRKVGERKSYQGTTTITVEKNQTFSEKVTMNV 233

[Close]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR17_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051840 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.100e-26
Identity = 91/232 (39.22%), Postives = 125/232 (53.88%), Query Frame = 1

		  
Query: 5   EELRGMLCYSHYDDTDFSSNNLEEIASQLENLIGILNFVSSLKDEGNNFYIQNATSLAIS 64
           +EL+G LC  H+D+ D SS N  +    L N  GI ++  SLK EGN FY  N     I+
Sbjct: 2   DELKGDLCLYHFDELDCSSTNWVQRLDFLINPFGIFDYARSLKAEGNTFYRNNDIRSTIA 61

Query: 65  KYSFALKILSFVLVSNDGDKSVFSALAVSLNLNLGACFIKERDFDKVGGF---------- 124
            Y  A+K L F  V+N+ +KSVF +LA+S+NLNL ACF KE+DF KVG            
Sbjct: 62  HYIQAIKFLYFADVNNEEEKSVFLSLALSINLNLAACFTKEKDFQKVGELCSLVLMYDAT 121

Query: 125 ---------VAAMELKKPNLAFRDLAQALQIDPKNKEFQLKLKEVTSLLGWSP---DLWK 184
                    VAA+EL +P++A  DL QAL+I P N EFQ K  EV S LG S    D   
Sbjct: 122 NAKAFFRRAVAALELSQPDIALLDLTQALKIHPNNGEFQQKFNEVLSTLGMSSTFVDFND 181

Query: 185 MHLKQFEMMSCLWAMSKRRKRKKKKERKERKERKMVTKMK-EGYSQKKIISI 214
             +   E++S    + K  KR+K  ERK  +      + K + +S+K  +++
Sbjct: 182 QTVGTDEVLSSSSFLGKEEKRRKVGERKSYQGTTTTKEEKNQTFSEKVTMNV 233

The following BLAST results are available for this feature:

BLAST of Spo15955.1 vs. NCBI nr
BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
BLAST of Spo15955.1 vs. ExPASy Swiss-Prot
BLAST of Spo15955.1 vs. TAIR (Arabidopsis)

BLAST of Spo15955.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902195666\|gb\|KNA12920.1\|	1.2e-39	100.	hypothetical protein SOVF_1220...	[more]
gi\|870868669\|gb\|KMT19472.1\|	5.2e-32	44.3	hypothetical protein BVRB_1g01...	[more]
gi\|870843414\|gb\|KMS96588.1\|	1.9e-29	41.9	hypothetical protein BVRB_8g20...	[more]
gi\|870842037\|gb\|KMS95551.1\|	3.3e-26	38.3	hypothetical protein BVRB_0071...	[more]
gi\|731326579\|ref\|XP_010674091.1\|	7.3e-26	40.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo15955.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R075_SPIOL	8.1e-40	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D104_BETVU	3.6e-32	44.3	Uncharacterized protein OS=Bet...	[more]
A0A0J8B9D0_BETVU	1.3e-29	41.9	Uncharacterized protein OS=Bet...	[more]
A0A0J8B3J8_BETVU	2.3e-26	38.3	Uncharacterized protein OS=Bet...	[more]
A0A0J8CR17_BETVU	5.1e-26	39.2	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo15955.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo15955.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 42..156 score: 1.6
IPR023114	Elongated TPR repeat-containing domain	GENE3D	1.10.150.160		coord: 44..111 score: 2.
None	No IPR available	unknown	Coil	Coil	coord: 176..203 scor

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding