Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAACGTTGCCAGGGTCCAGGACTCCAGGGAGTTGCAGATGCAAGCAGCACCCATATGCAAACCTAGACTGGCCGAGGCTATTTCCTAACTACTTCACAATCAGAAAATGTAAGATTCCGACAAAGCTTACCCCAATTACCATTGATTCCACTTTCCACAATGGTTTAGGTCATTTCTCCAACTACACCTTAACTGCTAAAACTGGTTTGGTTGCTAAAAGATCGCAATTCACCACACACTAGTTTCTTGTAAGGCACCTGCAATCATCTTACTGCCCAAATTTGTAATCACTTTTCTTCTAAACATATTATACTATAATTTTCACACTCACAGCTAGTTCCAAAGTGCTACGAGAAGAGCACGAGAAAATATGAATTTCCATTGACAGTAAAAAGGGGGAATTCTAGTAAAGGAAACTCAAATATATGAACAATATTATTAGCCATGTATGTTTTTTACTCAGAATCAGAACATAACAGTTCATTACATGTTGCTCCACCACCATTACCATCTTCCTTTTCTACCATACTAAAGTATTATGACCAGAATAATTTTTGAAAAAGGAAGTTTATGCTCCCAATATTTTTATATCGTACAACTTTAGCACAATCTTTGGCTATTTATATCAATCAAAGGCTGCCAAACAGATCATGCTGCATTAACAATAAATATTTGTTGAGCGTACTATCACACAGCCATTACCCCCAGGATCGTTAGGGTGATAACATGGGGGATAAACTGCGGATAGCTGTTGGAGTTTTGGGTACATCCCTATTCTCAAACCCCTGTTAACTAAATGAGTAGCTAAAAAAGTTTAACCTTATATATTTTCTTTTGCAGGAAACTTGGCTTCTGCGTTACTTTATGCATCACCCATGTACTGTGAAACTCCACCCAATTGTTTCATCAACCTAAATTTTTTCTCATTCTTTTAGTCCAAGATTAGAAGCTATCAAAATTCTCAAATAACTTCAAAATTCAATGTTTTCCCAGATTAACATTTTCAACAATCATAAAGAAGAAGAGCACTCAAGGGTTTTCATATGTCCCATACATTGTTGCTCTACTCAACGCTCTCCTTTACACTTGGTACGGCTTACCTATTGTAAGCAAAGGATGGGAAAATGTCTCCCTCACCACCGTCAATGGCCTAGGTGTCCTACTGGAATCCTGTTTTGTCCTCGTCTATCTTTCCTTAACTTCAACAAGGGAAAAGGTCAGTCATTTCAAACATCCTTAGTATCTTTTGATACTTCTAGGAGCCAGAACTTTTTTTGTTTATCATTCAAAAACAAGTCAGTGAAGATGGTCATGCACAGAGTTTGTGATAATAATTCCATGACATGATGCAGGTGAAAGTTGCAGCATTAACAATGACTTTTCTTGCACTATTCGTAGCCACAGCACTAATCTCTGCCTTACTGTTGCATGACCATCATAAAAGGAAAATATTTGTTGGAAGTGTAGGGCTGGTAACTTCGATAGCACTATATGGTGCCCCTCTTGTTGCTGTGGTGAGTCTTCATAACCCATCATGCTCTCTTAAATTATCACAGGTTCTTAACAGACATGCTTATCAGTTAAAGCACTACATGATTGCATGGTAGCAAAATATCATGTAATCTAAAATCTATCATATTTTGACATACATTCTCATGTTAGTAAAGCCCCAAAATCTGTCGTGTTTACCTATCAATCATTGACATGCACTTCTCAGAAAATAACAAATCTTGGGACCTTTTGGCAAGGAATTAACATCTTACCTGGATATATTACCGCAGAAGCAAGTGATAGCAACCAAAAGCGTGGAATTCATGCCATTTTATCTGTCATTCTTCACTCTCCTTTCTAGTTGCTTCTGGGGATGCTATGGACTACTGAGCCATGATTTTTTCATCACGGTTTGTGAACTCCCCTGATCTCACTTGCCACTCTCTCGTCTTTTTCAGTTCATTATTTTTTCCCCATAGGAACTTATATTTACCAAAAGTATATCATGAACCTTTAGTATTTTTACATATTTTGTAAAATGCATTTTGGTTCTTCTAACTTGAATCTTGACCGTTTGGCAGTCACCTAACTTGGTTGGAATTATCTTGGGCATCTTCCAACTGATGGTTTACTGGAAATATAAAGAAAGAGGAATAGAGGAAGACACAAACAAATGGGATTTAGAGGAGGATAAAGAGAAACCCAAACAAGTCAATAGACTAGCAACTGAATATGAAGATGACAGTGACACGAAGAGCAACAACAAATAGATTTCTACATACACATGTAAATGATGTAATCTGTTTATTCCACATTGCATATATAGATCACAATTGCATAACAACAAACTAATGGAAGACAAGAGATATGAAAGAGTGATTTGTACCTGTGATAGGTATCAAAGTAGTCACATCCTGTACGCCCCTGGTTGCACCTTAACGGTTAATGCTTGCTAATCTTGATGTTGATGTAGACACACAAAATAACTCTTGTGTTCTGCTAGATCATAGTTGAGCTACCATCATTATCCTGTAAATACCAACATCAGTCTCAAATAACTGATTAAGTTATACTAACCATCAGTTTAGGAATGCAGAAGTATATAAATTCACAAGCCTTCATATGCAAATTTCGGCAGTGTAGTAGGAGATAGTTTCTCATGGGTACCTACAAAACCACAACCAAATCTATGCATCTATTATCTATACTATAATCAACATCAAATTTTGGTGAAAATTTGCAGGACCACCTTTGCCAATAGCAACAACTGAAAAACAAGAAGAGAACCTGTAGTGCTTGTTTTTTCTGTGGCAAGGTGTTATGATAAGTTAGCTTCTATATTCAAATTCTAAGAAATAAAGATTCAACCCAATAGCATCAATTTTCCTACCCATCCCAACCAGGGGAAGGAGGTGGCCGGACACAGATTCTATCAGCATTCCAATCATCAAGCATAGTTCTGTCCTGTTATTTATATACTGTCAGTTTCATGACATTGAAATCTACCTTCAGATTTTCAATCTTTCCCATTTGTATTGGGTCCCTATTAAAATGAGATCATT CTAACGTTGCCAGGGTCCAGGACTCCAGGGAGTTGCAGATGCAAGCAGCACCCATATGCAAACCTAGACTGGCCGAGGCTATTTCCTAACTACTTCACAATCAGAAAATGTAAGATTCCGACAAAGCTTACCCCAATTACCATTGATTCCACTTTCCACAATGGTTTAGGTCATTTCTCCAACTACACCTTAACTGCTAAAACTGGTTTGGTTGCTAAAAGATCGCAATTCACCACACACTAGTTTCTTGTAAGGCACCTGCAATCATCTTACTGCCCAAATTTGTAATCACTTTTCTTCTAAACATATTATACTATAATTTTCACACTCACAGCTAGTTCCAAAGTGCTACGAGAAGAGCACGAGAAAATATGAATTTCCATTGACAGTAAAAAGGGGGAATTCTAGTAAAGGAAACTCAAATATATGAACAATATTATTAGCCATGTATGTTTTTTACTCAGAATCAGAACATAACAGTTCATTACATGTTGCTCCACCACCATTACCATCTTCCTTTTCTACCATACTAAAGTATTATGACCAGAATAATTTTTGAAAAAGGAAGTTTATGCTCCCAATATTTTTATATCGTACAACTTTAGCACAATCTTTGGCTATTTATATCAATCAAAGGCTGCCAAACAGATCATGCTGCATTAACAATAAATATTTGTTGAGCGTACTATCACACAGCCATTACCCCCAGGATCGTTAGGGTGATAACATGGGGGATAAACTGCGGATAGCTGTTGGAGTTTTGGGAAACTTGGCTTCTGCGTTACTTTATGCATCACCCATATTAACATTTTCAACAATCATAAAGAAGAAGAGCACTCAAGGGTTTTCATATGTCCCATACATTGTTGCTCTACTCAACGCTCTCCTTTACACTTGGTACGGCTTACCTATTGTAAGCAAAGGATGGGAAAATGTCTCCCTCACCACCGTCAATGGCCTAGGTGTCCTACTGGAATCCTGTTTTGTCCTCGTCTATCTTTCCTTAACTTCAACAAGGGAAAAGGTGAAAGTTGCAGCATTAACAATGACTTTTCTTGCACTATTCGTAGCCACAGCACTAATCTCTGCCTTACTGTTGCATGACCATCATAAAAGGAAAATATTTGTTGGAAGTGTAGGGCTGGTAACTTCGATAGCACTATATGGTGCCCCTCTTGTTGCTGTGAAGCAAGTGATAGCAACCAAAAGCGTGGAATTCATGCCATTTTATCTGTCATTCTTCACTCTCCTTTCTAGTTGCTTCTGGGGATGCTATGGACTACTGAGCCATGATTTTTTCATCACGTCACCTAACTTGGTTGGAATTATCTTGGGCATCTTCCAACTGATGGTTTACTGGAAATATAAAGAAAGAGGAATAGAGGAAGACACAAACAAATGGGATTTAGAGGAGGATAAAGAGAAACCCAAACAAGTCAATAGACTAGCAACTGAATATGAAGATGACAGTGACACGAAGAGCAACAACAAATAGATTTCTACATACACATGTAAATGATGTAATCTGTTTATTCCACATTGCATATATAGATCACAATTGCATAACAACAAACTAATGGAAGACAAGAGATATGAAAGAGTGATTTGTACCTGTGATAGGTATCAAAGTAGTCACATCCTGTACGCCCCTGGTTGCACCTTAACGGTTAATGCTTGCTAATCTTGATGTTGATGTAGACACACAAAATAACTCTTGTGTTCTGCTAGATCATAGTTGAGCTACCATCATTATCCTGTAAATACCAACATCAGTCTCAAATAACTGATTAAGTTATACTAACCATCAGTTTAGGAATGCAGAAGTATATAAATTCACAAGCCTTCATATGCAAATTTCGGCAGTGTAGTAGGAGATAGTTTCTCATGGGTACCTACAAAACCACAACCAAATCTATGCATCTATTATCTATACTATAATCAACATCAAATTTTGGTGAAAATTTGCAGGACCACCTTTGCCAATAGCAACAACTGAAAAACAAGAAGAGAACCTGTAGTGCTTGTTTTTTCTGTGGCAAGGTGTTATGATAAGTTAGCTTCTATATTCAAATTCTAAGAAATAAAGATTCAACCCAATAGCATCAATTTTCCTACCCATCCCAACCAGGGGAAGGAGGTGGCCGGACACAGATTCTATCAGCATTCCAATCATCAAGCATAGTTCTGTCCTGTTATTTATATACTGTCAGTTTCATGACATTGAAATCTACCTTCAGATTTTCAATCTTTCCCATTTGTATTGGGTCCCTATTAAAATGAGATCATT ATGGGGGATAAACTGCGGATAGCTGTTGGAGTTTTGGGAAACTTGGCTTCTGCGTTACTTTATGCATCACCCATATTAACATTTTCAACAATCATAAAGAAGAAGAGCACTCAAGGGTTTTCATATGTCCCATACATTGTTGCTCTACTCAACGCTCTCCTTTACACTTGGTACGGCTTACCTATTGTAAGCAAAGGATGGGAAAATGTCTCCCTCACCACCGTCAATGGCCTAGGTGTCCTACTGGAATCCTGTTTTGTCCTCGTCTATCTTTCCTTAACTTCAACAAGGGAAAAGGTGAAAGTTGCAGCATTAACAATGACTTTTCTTGCACTATTCGTAGCCACAGCACTAATCTCTGCCTTACTGTTGCATGACCATCATAAAAGGAAAATATTTGTTGGAAGTGTAGGGCTGGTAACTTCGATAGCACTATATGGTGCCCCTCTTGTTGCTGTGAAGCAAGTGATAGCAACCAAAAGCGTGGAATTCATGCCATTTTATCTGTCATTCTTCACTCTCCTTTCTAGTTGCTTCTGGGGATGCTATGGACTACTGAGCCATGATTTTTTCATCACGTCACCTAACTTGGTTGGAATTATCTTGGGCATCTTCCAACTGATGGTTTACTGGAAATATAAAGAAAGAGGAATAGAGGAAGACACAAACAAATGGGATTTAGAGGAGGATAAAGAGAAACCCAAACAAGTCAATAGACTAGCAACTGAATATGAAGATGACAGTGACACGAAGAGCAACAACAAATAG MGDKLRIAVGVLGNLASALLYASPILTFSTIIKKKSTQGFSYVPYIVALLNALLYTWYGLPIVSKGWENVSLTTVNGLGVLLESCFVLVYLSLTSTREKVKVAALTMTFLALFVATALISALLLHDHHKRKIFVGSVGLVTSIALYGAPLVAVKQVIATKSVEFMPFYLSFFTLLSSCFWGCYGLLSHDFFITSPNLVGIILGIFQLMVYWKYKERGIEEDTNKWDLEEDKEKPKQVNRLATEYEDDSDTKSNNK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo15991.1 vs. NCBI nr
Match: gi|902213266|gb|KNA17215.1| (hypothetical protein SOVF_081720 [Spinacia oleracea]) HSP 1 Score: 486.1 bits (1250), Expect = 3.700e-134 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo15991.1 vs. NCBI nr
Match: gi|731321740|ref|XP_010671514.1| (PREDICTED: bidirectional sugar transporter SWEET3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 393.7 bits (1010), Expect = 2.500e-106 Identity = 207/254 (81.50%), Postives = 225/254 (88.58%), Query Frame = 1
BLAST of Spo15991.1 vs. NCBI nr
Match: gi|629124761|gb|KCW89186.1| (hypothetical protein EUGRSUZ_A01497 [Eucalyptus grandis]) HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77 Identity = 148/249 (59.44%), Postives = 192/249 (77.11%), Query Frame = 1
BLAST of Spo15991.1 vs. NCBI nr
Match: gi|702243148|ref|XP_010049431.1| (PREDICTED: bidirectional sugar transporter SWEET3 [Eucalyptus grandis]) HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77 Identity = 148/249 (59.44%), Postives = 192/249 (77.11%), Query Frame = 1
BLAST of Spo15991.1 vs. NCBI nr
Match: gi|567858882|ref|XP_006422124.1| (hypothetical protein CICLE_v10007057mg [Citrus clementina]) HSP 1 Score: 295.8 bits (756), Expect = 7.100e-77 Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCN5_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_081720 PE=3 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 2.600e-134 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR69_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052450 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.800e-106 Identity = 207/254 (81.50%), Postives = 225/254 (88.58%), Query Frame = 1
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Match: A0A059DFJ7_EUCGR (Bidirectional sugar transporter SWEET OS=Eucalyptus grandis GN=EUGRSUZ_A01497 PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77 Identity = 148/249 (59.44%), Postives = 192/249 (77.11%), Query Frame = 1
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Match: A0A067ELS7_CITSI (Bidirectional sugar transporter SWEET OS=Citrus sinensis GN=CISIN_1g042197mg PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 5.000e-77 Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Match: V4U7W7_9ROSI (Bidirectional sugar transporter SWEET OS=Citrus clementina GN=CICLE_v10007057mg PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 5.000e-77 Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Match: SWET3_ARATH (Bidirectional sugar transporter SWEET3 OS=Arabidopsis thaliana GN=SWEET3 PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.800e-64 Identity = 132/256 (51.56%), Postives = 174/256 (67.97%), Query Frame = 1
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Match: SWT3B_ORYSJ (Bidirectional sugar transporter SWEET3b OS=Oryza sativa subsp. japonica GN=SWEET3B PE=3 SV=2) HSP 1 Score: 237.7 bits (605), Expect = 1.400e-61 Identity = 119/215 (55.35%), Postives = 154/215 (71.63%), Query Frame = 1
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Match: SWT3A_ORYSJ (Bidirectional sugar transporter SWEET3a OS=Oryza sativa subsp. japonica GN=SWEET3A PE=3 SV=2) HSP 1 Score: 219.9 bits (559), Expect = 3.100e-56 Identity = 108/211 (51.18%), Postives = 152/211 (72.04%), Query Frame = 1
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Match: SWET1_ARATH (Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.600e-39 Identity = 95/235 (40.43%), Postives = 139/235 (59.15%), Query Frame = 1
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Match: SWT1B_ORYSI (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.900e-37 Identity = 92/215 (42.79%), Postives = 129/215 (60.00%), Query Frame = 1
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Match: AT5G53190.1 (Nodulin MtN3 family protein) HSP 1 Score: 247.3 bits (630), Expect = 1.000e-65 Identity = 132/256 (51.56%), Postives = 174/256 (67.97%), Query Frame = 1
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Match: AT1G21460.1 (Nodulin MtN3 family protein) HSP 1 Score: 164.5 bits (415), Expect = 8.800e-41 Identity = 95/235 (40.43%), Postives = 139/235 (59.15%), Query Frame = 1
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Match: AT3G14770.1 (Nodulin MtN3 family protein) HSP 1 Score: 148.3 bits (373), Expect = 6.500e-36 Identity = 85/215 (39.53%), Postives = 127/215 (59.07%), Query Frame = 1
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Match: AT3G16690.1 (Nodulin MtN3 family protein) HSP 1 Score: 144.4 bits (363), Expect = 9.400e-35 Identity = 84/211 (39.81%), Postives = 125/211 (59.24%), Query Frame = 1
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Match: AT5G40260.1 (Nodulin MtN3 family protein) HSP 1 Score: 138.3 bits (347), Expect = 6.700e-33 Identity = 87/243 (35.80%), Postives = 144/243 (59.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15991.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15991.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15991.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15991.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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