Spo16035.1 (mRNA) | SpinachBase

Overview


Name	Spo16035.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Proline-rich cell wall-like protein
Location	chr3 : 4141529 .. 4148517 (-)
Sequence length	1248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACACTTTAATTAAAAATTCAAGTAGTAAACAATTCAATATTTTCCTTTTCTTTCTTTGAGGGGAAGTCTTACAAAAATATTTATGTAGAAAAAGATCCATCCAGGCAATTCATTCACAATTCATCCCCAAATTCCATCTCGCTACCCCTCTGCAAAATTAGGAATTAGCAATTAGGGTTTGAAATTCGGAATTGAAATTGGGGGTTTTTGATTGGATTTCTGAAGAAGGAAGAAACCCAAAAAAAATGGAGTACGACTACAATTCAAGCAGACACAGAGCAGGCGTTTCACCCTACGATCCTCACGTACCCATGTACCAAAAGATGTCTTCTTCTTCCTCCTCTCAATCGCCTCATGTTTCTTCGATGTACCCTAAGATCGGTCAACCGGTTAACCCTCCTCCTGCCCGTGCCCCTCCATTGGCTCCATATCACCATTCTTCTCCTCCTCCGACTTCCTGTAAGTCTATTTTTTTTCTCCCCTCTTCTGATTTTATGTCTGTTTTGATGTGTTGTACTTGGGTTGTGAGAAATTTGGCTAAATTTGAACTTTTTGTTTGTTGAATTTAGCTGATCAGCAATTTGTGATTGAGTATTGATTATAATTGCTATGTTAGTCGGATTTGGGTATATGTCCAAATGTCAGATTCGGGTATTAACACACAAGTATTAATAATTTCCATAATTTGGTTCAGAATGAAGTATCCATAGTCATGTTAGAGTGTTGAGAATCTGCCATTGTACTTGGGATGAAATGAAAGAGTCCGGCTGTCCGAGTAACATAGGATCATTGAGTTGATTGATTGAGCAGTTTCTGGTTGTAGGCTATCTAATTGCAGAGTTTTGTTTGTCAAAGTGAGGGCCTTAATATAACCCCAATATCTTAATTATGTTGATGTTTGACTTAATTATTTTCTTACATCATGGCTATGTTTAATTTTGCAGCAGGAACTGGGATCAGGGTTCAAATAAAGCCAGAATATAGGATCACTCCTCCTGTAAGTTCCAGATTCCAACTTCTACGTTACGCCATAATTGATTAGGTTTTCATTTGTTTCTTCACTTGCATGATCATTTCACAAAATACGACAGCTGTCTTTAGGTAGGGGGGGGGTAATTTCTGGTCTTCGTATTGTCAGTATAAGACTTAACAAAGGCATGGTTACATAGTTACATATATGGAATAGGTGTCACATCTGCCATCTAGCATATGGATATGACTATTCTAAGAAAGACAGATAGGGAAAGATAAAACTAAGCCTAACAAAACTAAAACCAAAAATAACAGGTCTAGGGTATAGATTGAAAGCGTTTAACCTGCTTTCTCGTGTGACTTGATTCTGGCCTCTTCTCATAGCTTCTTCCATGCACATATTTGCTGATTCTTTTTTTTGATTGAAGCATCAAATGGTCCTTGAACCATTGCCTAGAACAATAGCACCAGCCAGGATTTTGTTGAAGTTAGGAAAGAGTGAAGCTCTTGCCACTTGCTTTCTACTAGTATAGTAATGTACTAATATGTATAAGTGTCCATCAGGCTGTTGGGATAGTGAATGACTAAGTTGAATGGAGGGCAGGATAGATAGAGCGGATAGATGTGTACCGGGACGCTTTATGTCTCCTCAAACTCCTGTGTTAGATACTTAACCCATTAGCCTGGAAAGAAAAGGTTGGTGCTTGATGTTGGACCGGAGTACGCTAATGTTTCATAAGATGGTTAACTTTGTACTTGCCCATGTAATTATGTTCTTCTTCCAACACTTGTAGCCGAGTCTAAGTACCAAAAGTAGAAGAAAGAGGCTACTATAAGTTTACTAACTAGTGTCTGTTTTTTTTTTATATAAATAGAGGCAACTGTGTCGAGTAACTAGGATCTCAGATTTCTTTAATTAGCCAATTCCTACTTCACTGACTCTCTTTTCTTATCCGTGTTTCCTTTAAGTCTTTTTACTCGTTGTTTATACAATTTATTCATCTATCCTCTGTATATGTTATGATAATACAAATTAAAAATATGAAGCATATAACTTTTGAATGGAATGATGTGTCCATATACTCATATCCAGGATAACCTAAAAGTCCTTGAACTATAAATTGTTAAAAGTTATGTAGGAAACGCTTGTATATGTACCTTATCATGACATCCATACCCATGTTTGGGCAACATAGCTTGAAACTTCCCTGGTGGTTATTGTTTTATTTTCAGTGATGTCTAGAGTCACTAGAAAGTAATTATTGATGGTGGTTTGGCCACAACCTACATTGAATAAGCATAACGTAATCATGTGGAGATATGTGAGTAAACTATACTGGAGGTCCCTAAACTTTGGCAAAAGGAGCAGTTAAGTCCCTCAAGTTTCAAAAGGAGCATTTTAGTCCCTCAAAATGGATGGAATCAGCTACTTTTGTTAACACCGTTTCATTTTCTGTTAAGTTCAATAAAATAATAATAAAACCGCTTTAAAGAAAAGGAAAATTAATTTACACGTGTATAAATAAATGAAAACAGCTGATTTTAATTATGACTTAGCTTTTTCAACTTACTTAGCTTTTTCATATGGCTTTTTCTCCATTTACACGTTTCACCCTTTATATTCTCCTTTTCTAGGTTTTTCCACAACTCTTCCTAATCAAATCGAATTTAGTGAGTAACCCAAGCAAATTTACTCTAAATTTTCAGCAACTATCGCCATAAACTTCAGCTAATTGTTGTTCTTGCACAACTCTAAAGTTTCAAATTCTCTTCTCCCAGATGTCTGCTACTACAACTAGTTCTTCTTCTACCTTTTTTCTCTCTCTTTCTCTCTCCTCTTTTATTATGGATTCTCTTCAATCTGCTTCTCTTTCTTAATTCCTGTATTTCTCCAACAATTCCATTGTAATTTCACATTTTCACTGATTTTCCCCTTTTTTTGTTCCCCGGTTTTTTATTTATTTTGGGTTGGTTTCGATTTTTTTTCTTATTTATTCTGGGTTGGTTTCAATTGAAGAGATTCTGGGTGGGTTTCGTTACCACATGGTAACCCACACCCCTGCTCCCCCATTTTCTCTCTCCTCCCTTTCTGAAAAAAATTGATCTCCGATCTCATTTGGGGAAACCACTTTCTTCTTCATAATCCTATTCAATAATTCTGAGAAAAATAGTTACTTCAATATTTCAAAACTTACTCCGTATTTCAAAAGATTGTTACCAAGAAAAATAGAACGATGATGATTGATGGTGATCATGATGAGGATCAACGATGATTGATGGTGATCATGACGAGGATCTCAAGCTCAAGTTGATAGATGATTATTGTGATCTTTGAAGGTGCATGATTATTGTGATCTTAAGCTCAAGTTGATAGATGATTGATGGTGATCATGATGAGGATTACAGTGGAATTTTACACTTAGACCCCGCATTGTTGTTTGATCCACAAAGTTATGTTAGCTAGCTAGGCTGTTGATAAGAATATAATTGAAAGAGTATGGTTGAGCAGAGTACTAGTAGTCGTAGGCTCGTTAGATTTCATGTATGAGTTGCTGACTTGCTGATTAAACATGAGATTGAAGATGATGATGATGCATGGAGTTTATGGGTTTGAGCTCGGATGAATTTTACCGGAAATGTAAGTTACTTGGGTGTGCACACAAGGTGTTTGATAAATTGTCTCTGAGAAATGTTGTTGATTAACCTATGCTTGTTGGGTGTGTTAATTTGGGGGATTTGATTAGTAGGAAGCGTTAGATCCTTTATTTTATTTTATTAAGTGTTGAATAATTTGGGTACAAATGGCCTTGTTAAATACTTTGAACTGCTAGTTTTTTGTAAAAAGCTAACTTAAAAGGGTTTCCCTTTATTTAATTATTGTTAATATGTAAAAGTAACTGTTATTTTGTCCTTTTCTGCCCTTTATATTAATTTGCCTTTATTTTTAATTCATTTAACAGACGTTAGTAACAGAAGTCAAAAAGCAGCGGTTTCCATCCATTTTGAGGGACCTAAATGCTCATTTTGAAACTTGAGGGACTTATCTGCTCCTTTTGGCAAAGTTTAGGGACCTCCAAACCTATTTACTCGGAGATATGTCATTGATTTTGTTGCTTGTCTTTCTTATACTTGTGAATTGACCTTTTCTGTTTCTACTTTTCTGTTCAATAGCCTCAAATGTTTCCACAAATGGGAGATATTCCACGAAGTACATTCCGTTTTGATTTTGATTTAGAGAAGAAGATACTTGCTGAAGCAGAGAAGGAAAACCAGAATTGGAGCCGCCTTGCATCTGAAAATCTCCCATCAAGAACACCACAATCCATGCCATCAATGGTAATTTATTTTACTCCCACTAATTTTAGTGTAGATCACATAAATCATGAAGTGTGCAACGCTTTCTTCCCCCTAATTTGCACCCTTGGTCTCTCTCCCTTCTCACTATTTGTGCCCCCTTTGATGTATGGGTAAAATAGTAGGTTTTAGTCTTGAAACTACTTTCCTACATCTCAAGGGTTCTTTAGTCTGTTGCCATTGAACAACCTGTATTTTATGCTTATTGCTTTACAACCCATCTGAGTATAGATCAAGCATATTGTCTCCTATTGCTCTGGAATTTTGTGTGTGCATATATGAATTCACAAGCTGGACAAAACAATAGAATGGTTACCCTCTGCATTCCAGAACAGGTAAAGGCTGTTATACATTGGGGTCCAGGTAGACCTGTCAAACGGGTCGGTCGGGTCGGATTGTAAATAATTATTTTCGGGTTCGGGTTAGATCGGGTCGGTCACTTTCGGGTTCGGGTTTCGGGTTTACAAATGCTTGTTCAAGACCCAGAACTTTCGGGTTCGGGTCGACCCAACGGGTTGAGAGATTTTAAAACGCGCATTATATTTTCATTAATTTAGGTGATAAATATACAAAATATGGGCACAAATTAACAAATTTTCCTACATAAGTTTATATTTAGTCAAATTCAACCATAAAATGGCGTATAGTTCAAATTAAAATCATATTACACACAATAATAGTAAAAACAGCGTGTTTATTATGCTTAAATTTTCTCATAATCGCAATTATTACTATAAATACAACGATTTTCAATCGGTCGGGTCCAAAACGGGTTCGGTCGGATTTTGACCCATTACTTTTCGGGTTGCTCGGGTTCGGATAAAATCGGGTTACGGGTCACAAAATCTTGTTCAGGACCCAGTATTTTCGGGTCAGGTTCGGATCGGTTTTCGGGTCGGGTCGATTTTTGACAGGTCTAGGTCCAGGGGATAAAGAGGTCATATAACTTACTTGGTGTTATATTAGGTGGCATGAGATGAGCTTCCATTTAACATTTCTTGTATAACATCTTTTAGTAGCTTTGACTTCAGTTCCTTAATGATTTACGCAAGTCTTTTAGTTTCTCCCTGTGATTCCTTTTAGGATAATTGGACAAAAGAAAACCGAGTCCCAAATTTATGCTTCCCCAATTATATGTTAAAAAAGTGCATGAAATAGCTCCCATCTGTTTATCTCTGCGTGCATTCATATGCCCCCTCCCCCCTCCTCTGTCCGGGTTTAGGTGTGTGAACATCTATCCAGACTACCTGTTACTGTCCCTATACTTGCGTTGTCAGGTTTGTTCCTATTTCCGTTATTATGTTGTTCTAGACTCTAAAAGGATGTAATTACTTGTAGGCTCCTGGTGCAGATCCCGTTGTGAGCAAATATATTGCATCAGGCCTAAACCGAGAAGCTGTTCCTTTGGCTGTTGCGACGTTTGGGGACAACCCTACTAAGGTTTGTGCCGGATTTTTATTATTTGCAGTGAAGTTCCCTTTTTGCCCCCTTAACTCACTATGTCATGCACCATTGCACTTCACTTCTAATGTAGTAATAAACCCCGTACCCCCCAAAGTGTGTTGGCAAGGAGTAGGTTTGGCATCCTTTACACATGCTTAGTTAATACGATCTAGTTATTATGGGGGGTCTCATTTTTTTGTCCGCTTCTTAGGGATTAGGTTCCTGCAAACTTGTACTCCCTTCGTAATTAATTTAAAAATACACTTTCTATAATCGGCCGCATTTAAATAAAAGATACATTTTCCTTTTTTGGCATTAATATTTCTCTCATTCTTGTGGTCCCTGCACTCACTCACATCGTATTTTTACTACAATAAATAATTCACCCACTACCCAATTTCATCTTATTTTAATAAATTCAACTCACTCTCCTAAAATACGTGTCGGTCAAAGTGTATCTTTTAGTTAAATACGGAGGGAGTACTCCAGTACCTGCTGTCTATTAGAAACGATGTGAGCACTGTATTTTTGTATTTTCTTAGTTTGACAAATTGAATCATGATGTTCAAGTCTGTAGAAATTGAATCATGATGTTCTTATCCTCCACCACCGCTCCCCCCTCAATTTCCCTTTTTTTTCTTCTTGGGTTTAGATGATGTCTTTGCATTTCACTATCTGCTCAGGCCATTGCTAGAACTTACTGTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTCCTGGGCACTTGTTGTAGGTTCGAGAGTTTGTGAATGGTTTCACCCTCCTTCGAGAAATGGGGTTCCCTTCCAACAACGTCGCTGAAGCTCTTCTTATGCATGACAATGACACAGATAAAGCTTTAGCTCATTTCCTGAATAGTTCATCATAGAGAGTCTCTTCGCGTCTTGCAAATTTCTCCCTTAATATTGTTGACAAGGGGATTCTTGTGGTTTTTGGCCATTTATACCCTGCTTTTCTGATGTACAAAGTAGTCTTAACTTGCTGTTGAATGTTGATGCAACATCTCCCATCTGGCTTATTGCTCTTGTAAACCAAAAAGGGATCTTTCTTTTATCATGATATTGTATGTGTATAAATATACATTATGTCGCTCGAGTGTAGTGGTTGTACAAGAAGTGTTTTTTTTCCTTTCTTTTTCATGTTATTACTCTGTATCTATCCAATAAAGCGTTATCTCGGCAACAAACTAGCAATGCCCCT

mRNA sequence

TAACACTTTAATTAAAAATTCAAGTAGTAAACAATTCAATATTTTCCTTTTCTTTCTTTGAGGGGAAGTCTTACAAAAATATTTATGTAGAAAAAGATCCATCCAGGCAATTCATTCACAATTCATCCCCAAATTCCATCTCGCTACCCCTCTGCAAAATTAGGAATTAGCAATTAGGGTTTGAAATTCGGAATTGAAATTGGGGGTTTTTGATTGGATTTCTGAAGAAGGAAGAAACCCAAAAAAAATGGAGTACGACTACAATTCAAGCAGACACAGAGCAGGCGTTTCACCCTACGATCCTCACGTACCCATGTACCAAAAGATGTCTTCTTCTTCCTCCTCTCAATCGCCTCATGTTTCTTCGATGTACCCTAAGATCGGTCAACCGGTTAACCCTCCTCCTGCCCGTGCCCCTCCATTGGCTCCATATCACCATTCTTCTCCTCCTCCGACTTCCTCAGGAACTGGGATCAGGGTTCAAATAAAGCCAGAATATAGGATCACTCCTCCTCCTCAAATGTTTCCACAAATGGGAGATATTCCACGAAGTACATTCCGTTTTGATTTTGATTTAGAGAAGAAGATACTTGCTGAAGCAGAGAAGGAAAACCAGAATTGGAGCCGCCTTGCATCTGAAAATCTCCCATCAAGAACACCACAATCCATGCCATCAATGGCTCCTGGTGCAGATCCCGTTGTGAGCAAATATATTGCATCAGGCCTAAACCGAGAAGCTGTTCCTTTGGCTGTTGCGACGTTTGGGGACAACCCTACTAAGGTTCGAGAGTTTGTGAATGGTTTCACCCTCCTTCGAGAAATGGGGTTCCCTTCCAACAACGTCGCTGAAGCTCTTCTTATGCATGACAATGACACAGATAAAGCTTTAGCTCATTTCCTGAATAGTTCATCATAGAGAGTCTCTTCGCGTCTTGCAAATTTCTCCCTTAATATTGTTGACAAGGGGATTCTTGTGGTTTTTGGCCATTTATACCCTGCTTTTCTGATGTACAAAGTAGTCTTAACTTGCTGTTGAATGTTGATGCAACATCTCCCATCTGGCTTATTGCTCTTGTAAACCAAAAAGGGATCTTTCTTTTATCATGATATTGTATGTGTATAAATATACATTATGTCGCTCGAGTGTAGTGGTTGTACAAGAAGTGTTTTTTTTCCTTTCTTTTTCATGTTATTACTCTGTATCTATCCAATAAAGCGTTATCTCGGCAACAAACTAGCAATGCCCCT

Coding sequence (CDS)

ATGGAGTACGACTACAATTCAAGCAGACACAGAGCAGGCGTTTCACCCTACGATCCTCACGTACCCATGTACCAAAAGATGTCTTCTTCTTCCTCCTCTCAATCGCCTCATGTTTCTTCGATGTACCCTAAGATCGGTCAACCGGTTAACCCTCCTCCTGCCCGTGCCCCTCCATTGGCTCCATATCACCATTCTTCTCCTCCTCCGACTTCCTCAGGAACTGGGATCAGGGTTCAAATAAAGCCAGAATATAGGATCACTCCTCCTCCTCAAATGTTTCCACAAATGGGAGATATTCCACGAAGTACATTCCGTTTTGATTTTGATTTAGAGAAGAAGATACTTGCTGAAGCAGAGAAGGAAAACCAGAATTGGAGCCGCCTTGCATCTGAAAATCTCCCATCAAGAACACCACAATCCATGCCATCAATGGCTCCTGGTGCAGATCCCGTTGTGAGCAAATATATTGCATCAGGCCTAAACCGAGAAGCTGTTCCTTTGGCTGTTGCGACGTTTGGGGACAACCCTACTAAGGTTCGAGAGTTTGTGAATGGTTTCACCCTCCTTCGAGAAATGGGGTTCCCTTCCAACAACGTCGCTGAAGCTCTTCTTATGCATGACAATGACACAGATAAAGCTTTAGCTCATTTCCTGAATAGTTCATCATAG

Protein sequence

MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLAPYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo16035	Spo16035	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo16035.1	Spo16035.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16035.1.utr5p.1	Spo16035.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16035.1.CDS.5	Spo16035.1.CDS.5	CDS
Spo16035.1.CDS.4	Spo16035.1.CDS.4	CDS
Spo16035.1.CDS.3	Spo16035.1.CDS.3	CDS
Spo16035.1.CDS.2	Spo16035.1.CDS.2	CDS
Spo16035.1.CDS.1	Spo16035.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16035.1.utr3p.1	Spo16035.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16035.1.exon.5	Spo16035.1.exon.5	exon
Spo16035.1.exon.4	Spo16035.1.exon.4	exon
Spo16035.1.exon.3	Spo16035.1.exon.3	exon
Spo16035.1.exon.2	Spo16035.1.exon.2	exon
Spo16035.1.exon.1	Spo16035.1.exon.1	exon

Homology

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BLAST of Spo16035.1 vs. NCBI nr
Match: gi|902238751|gb|KNA25301.1| (hypothetical protein SOVF_007850 [Spinacia oleracea])

HSP 1 Score: 445.3 bits (1144), Expect = 6.400e-122
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA 60
           MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA
Sbjct: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA 60

Query: 61  PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK 120
           PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK
Sbjct: 61  PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK 120

Query: 121 ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR 180
           ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR
Sbjct: 121 ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR 180

Query: 181 EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS
Sbjct: 181 EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 222

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BLAST of Spo16035.1 vs. NCBI nr
Match: gi|731321795|ref|XP_010671545.1| (PREDICTED: uncharacterized protein LOC104888310 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 342.4 bits (877), Expect = 5.800e-91
Identity = 185/231 (80.09%), Postives = 197/231 (85.28%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHR--AGVSPYDPHVPMYQKMSSSSSSQSPHVSS---MYPKIGQP---VNPP 60
           ME  Y SSR+   AGVSPYDPH+PMYQK+SSSSS  S HVSS   +YPKIGQ    + PP
Sbjct: 1   MENGYYSSRNGGGAGVSPYDPHIPMYQKLSSSSSQPS-HVSSSSSLYPKIGQSGQSLMPP 60

Query: 61  PARAPPLAPYHHSSP-PPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLE 120
            ARAPP   YHHSS  PPTSSGTGIRVQIKP+YRITPPPQ+ PQMGDIPRS F+FDFDLE
Sbjct: 61  SARAPP---YHHSSSAPPTSSGTGIRVQIKPQYRITPPPQLLPQMGDIPRSAFQFDFDLE 120

Query: 121 KKILAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVAT 180
           KKILAEAEKENQNWSRLASEN PSRT QSMP+  P  DP+VSKYIASGLNREAVPLAVAT
Sbjct: 121 KKILAEAEKENQNWSRLASENFPSRTSQSMPATTPAVDPLVSKYIASGLNREAVPLAVAT 180

Query: 181 FGDNPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           FGDNPTK+REF NGFTLLREMGF SNNVAE LLMHDNDTDKA+AHFLNSSS
Sbjct: 181 FGDNPTKIREFANGFTLLREMGFSSNNVAEVLLMHDNDTDKAVAHFLNSSS 227

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BLAST of Spo16035.1 vs. NCBI nr
Match: gi|255545086|ref|XP_002513604.1| (PREDICTED: uncharacterized protein LOC8277051 [Ricinus communis])

HSP 1 Score: 280.8 bits (717), Expect = 2.100e-72
Identity = 153/227 (67.40%), Postives = 178/227 (78.41%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSP-HVSSMYPKIGQPVNPPPARAPPL 60
           M+YD+   R+R   S YD   PMY+  SSS+ S  P +  S+YP+IGQ     P   PP+
Sbjct: 1   MDYDF---RNRTTGSSYDSQTPMYRTTSSSTPSGHPMYGQSLYPRIGQQQGHTPV--PPV 60

Query: 61  ---APYHHSS-PPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKIL 120
              + YH SS PPP+SSG GIRV +KPEYRITPPPQ+ PQMGDIPRS F+F FDLE++IL
Sbjct: 61  GRHSSYHQSSAPPPSSSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRIL 120

Query: 121 AEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDN 180
           AEAEK+ QNWS+L  ENLPS+T +S  S+   ADPVVSKYIASGLNREAVPLAVA +GDN
Sbjct: 121 AEAEKDIQNWSKLGLENLPSKTTESTSSLGSAADPVVSKYIASGLNREAVPLAVANYGDN 180

Query: 181 PTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           PTKVREFVNGF+LLREMGF +NNVAEALLM+DNDTDKAL HFLNSSS
Sbjct: 181 PTKVREFVNGFSLLREMGFSANNVAEALLMYDNDTDKALTHFLNSSS 222

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BLAST of Spo16035.1 vs. NCBI nr
Match: gi|225462713|ref|XP_002267522.1| (PREDICTED: uncharacterized protein LOC100260370 [Vitis vinifera])

HSP 1 Score: 277.7 bits (709), Expect = 1.800e-71
Identity = 152/228 (66.67%), Postives = 178/228 (78.07%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHV---SSMYPKIGQP---VNPPPA 60
           M YDY   R+RA   PYD  +PMY+  +SSSSS   H    + MYP++ QP     PPP 
Sbjct: 1   MSYDY---RNRAN-QPYDSQIPMYKTTTSSSSSAPGHQLYGAPMYPRVSQPSFGAVPPPG 60

Query: 61  RAPPLAPYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKI 120
           RA   + Y  +S P +S G GIRV IKPE+RI+PPPQ+ PQ+G+IPRSTF+FDFDLEKKI
Sbjct: 61  RA---SSYQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKI 120

Query: 121 LAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGD 180
           LAEAEK++QNWSRL  ENLPS+  +S PSM   ADPVVSKYIASGL+REAVPLAVA +GD
Sbjct: 121 LAEAEKDSQNWSRLGLENLPSKALESTPSMGSTADPVVSKYIASGLSREAVPLAVANYGD 180

Query: 181 NPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           N TKVREF NG+TLLREMGF S+NVAEAL+M+DNDTDKALAHFLNSSS
Sbjct: 181 NETKVREFTNGYTLLREMGFSSSNVAEALVMYDNDTDKALAHFLNSSS 221

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BLAST of Spo16035.1 vs. NCBI nr
Match: gi|719985939|ref|XP_010251549.1| (PREDICTED: uncharacterized protein LOC104593421 [Nelumbo nucifera])

HSP 1 Score: 276.6 bits (706), Expect = 3.900e-71
Identity = 154/228 (67.54%), Postives = 175/228 (76.75%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVS---SMYPKIGQP---VNPPPA 60
           M+YD+   R+RAG  PYD H+PMY+  +SSS S S H     S+YP++GQP   V PP  
Sbjct: 48  MDYDF---RNRAG-PPYDSHIPMYRSNTSSSPSPSSHPHHGPSLYPRVGQPSHAVIPPAG 107

Query: 61  RAPPLAPYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKI 120
           R      YH ++ P  SSG G+RV IKPEYRIT PPQ+ PQMGDIPRSTF+FDF+LEKKI
Sbjct: 108 RT---TSYHQTTSP--SSGLGMRVAIKPEYRITAPPQLSPQMGDIPRSTFQFDFELEKKI 167

Query: 121 LAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGD 180
           LAEAEKENQNWSRL  ENL SRT +S PS     DPVVSKY ASGL+REAV LAVATFGD
Sbjct: 168 LAEAEKENQNWSRLGLENLSSRTAESNPSSGSATDPVVSKYTASGLSREAVSLAVATFGD 227

Query: 181 NPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           NPTKVREFV G+ LLREMGF  N+VAEAL M+DNDTDKALAHFLNSS+
Sbjct: 228 NPTKVREFVKGYNLLREMGFSPNSVAEALAMYDNDTDKALAHFLNSST 266

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BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0L3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007850 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.400e-122
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA 60
           MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA
Sbjct: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPLA 60

Query: 61  PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK 120
           PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK
Sbjct: 61  PYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAEAEK 120

Query: 121 ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR 180
           ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR
Sbjct: 121 ENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDNPTKVR 180

Query: 181 EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS
Sbjct: 181 EFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 222

[Close]

BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQS2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052650 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.000e-91
Identity = 185/231 (80.09%), Postives = 197/231 (85.28%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHR--AGVSPYDPHVPMYQKMSSSSSSQSPHVSS---MYPKIGQP---VNPP 60
           ME  Y SSR+   AGVSPYDPH+PMYQK+SSSSS  S HVSS   +YPKIGQ    + PP
Sbjct: 1   MENGYYSSRNGGGAGVSPYDPHIPMYQKLSSSSSQPS-HVSSSSSLYPKIGQSGQSLMPP 60

Query: 61  PARAPPLAPYHHSSP-PPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLE 120
            ARAPP   YHHSS  PPTSSGTGIRVQIKP+YRITPPPQ+ PQMGDIPRS F+FDFDLE
Sbjct: 61  SARAPP---YHHSSSAPPTSSGTGIRVQIKPQYRITPPPQLLPQMGDIPRSAFQFDFDLE 120

Query: 121 KKILAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVAT 180
           KKILAEAEKENQNWSRLASEN PSRT QSMP+  P  DP+VSKYIASGLNREAVPLAVAT
Sbjct: 121 KKILAEAEKENQNWSRLASENFPSRTSQSMPATTPAVDPLVSKYIASGLNREAVPLAVAT 180

Query: 181 FGDNPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           FGDNPTK+REF NGFTLLREMGF SNNVAE LLMHDNDTDKA+AHFLNSSS
Sbjct: 181 FGDNPTKIREFANGFTLLREMGFSSNNVAEVLLMHDNDTDKAVAHFLNSSS 227

[Close]

BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Match: B9RIN5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1581330 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.400e-72
Identity = 153/227 (67.40%), Postives = 178/227 (78.41%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSP-HVSSMYPKIGQPVNPPPARAPPL 60
           M+YD+   R+R   S YD   PMY+  SSS+ S  P +  S+YP+IGQ     P   PP+
Sbjct: 1   MDYDF---RNRTTGSSYDSQTPMYRTTSSSTPSGHPMYGQSLYPRIGQQQGHTPV--PPV 60

Query: 61  ---APYHHSS-PPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKIL 120
              + YH SS PPP+SSG GIRV +KPEYRITPPPQ+ PQMGDIPRS F+F FDLE++IL
Sbjct: 61  GRHSSYHQSSAPPPSSSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRIL 120

Query: 121 AEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGDN 180
           AEAEK+ QNWS+L  ENLPS+T +S  S+   ADPVVSKYIASGLNREAVPLAVA +GDN
Sbjct: 121 AEAEKDIQNWSKLGLENLPSKTTESTSSLGSAADPVVSKYIASGLNREAVPLAVANYGDN 180

Query: 181 PTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           PTKVREFVNGF+LLREMGF +NNVAEALLM+DNDTDKAL HFLNSSS
Sbjct: 181 PTKVREFVNGFSLLREMGFSANNVAEALLMYDNDTDKALTHFLNSSS 222

[Close]

BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Match: A5APR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02450 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.200e-71
Identity = 152/228 (66.67%), Postives = 178/228 (78.07%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHV---SSMYPKIGQP---VNPPPA 60
           M YDY   R+RA   PYD  +PMY+  +SSSSS   H    + MYP++ QP     PPP 
Sbjct: 1   MSYDY---RNRAN-QPYDSQIPMYKTTTSSSSSAPGHQLYGAPMYPRVSQPSFGAVPPPG 60

Query: 61  RAPPLAPYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKI 120
           RA   + Y  +S P +S G GIRV IKPE+RI+PPPQ+ PQ+G+IPRSTF+FDFDLEKKI
Sbjct: 61  RA---SSYQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKI 120

Query: 121 LAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGD 180
           LAEAEK++QNWSRL  ENLPS+  +S PSM   ADPVVSKYIASGL+REAVPLAVA +GD
Sbjct: 121 LAEAEKDSQNWSRLGLENLPSKALESTPSMGSTADPVVSKYIASGLSREAVPLAVANYGD 180

Query: 181 NPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           N TKVREF NG+TLLREMGF S+NVAEAL+M+DNDTDKALAHFLNSSS
Sbjct: 181 NETKVREFTNGYTLLREMGFSSSNVAEALVMYDNDTDKALAHFLNSSS 221

[Close]

BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Match: A0A0B0P5B7_GOSAR (Ubiquitin-associated 1 OS=Gossypium arboreum GN=F383_24950 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.200e-68
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSP-HVSSMYPKIG-QP----VNPPPA 60
           M+YD+   R+R G  PY+  +P+Y++  +SSSS  P + SSMYP+IG QP    V PP  
Sbjct: 1   MDYDF---RNRTG-PPYEAQIPIYRQQPTSSSSTHPMYGSSMYPRIGGQPAAHSVAPPTT 60

Query: 61  RAPPLAPYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKI 120
           RA   + +H +S P +SSG GIRV +KPEYRITPPPQ+ PQ+GDIPRS F+FDF+ E+KI
Sbjct: 61  RA---SSFHQNSSPSSSSGLGIRVALKPEYRITPPPQLSPQVGDIPRSNFQFDFEFERKI 120

Query: 121 LAEAEKENQNWSRLASENLPSRTPQSMPSMAPGADPVVSKYIASGLNREAVPLAVATFGD 180
           LAEAEKEN NWS+L  ENL S+  ++  S    +DPVVSKYIASGL+REAV +AVA +GD
Sbjct: 121 LAEAEKENMNWSKLGLENLSSKPIETSSSTGANSDPVVSKYIASGLSREAVTVAVANYGD 180

Query: 181 NPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           NPTKVREFV G+ LLREMGF SNNVAEALLM+DNDTDKALAHFLNSSS
Sbjct: 181 NPTKVREFVTGYNLLREMGFSSNNVAEALLMYDNDTDKALAHFLNSSS 221

[Close]

BLAST of Spo16035.1 vs. TAIR (Arabidopsis)
Match: AT5G53330.1 (Ubiquitin-associated/translation elongation factor EF1B protein)

HSP 1 Score: 224.6 bits (571), Expect = 6.200e-59
Identity = 127/228 (55.70%), Postives = 158/228 (69.30%), Query Frame = 1


		  
Query: 1   MEYDYNSSRHRAGVSPYDPHVPMYQKMSSSSSSQSPHVSSMYPKIGQPVNPPPARAPPL- 60
           M+YDY   R+++G   Y    PMY   S+S S  S H    YPKIGQ   P P    P  
Sbjct: 1   MDYDY---RNKSGGPSYPR--PMYGPPSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPE 60

Query: 61  --APYHHSSPPPTSSGTGIRVQIKPEYRITPPPQMFPQMGDIPRSTFRFDFDLEKKILAE 120
             + + H++ P  SSG GIRV +KPEYRITPPPQ+ P++GDI RS+F+FDF LE+K+LAE
Sbjct: 61  RNSSFQHNTSP--SSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAE 120

Query: 121 AEKENQNWSRLASENLPSRTPQSMPSMA---PGADPVVSKYIASGLNREAVPLAVATFGD 180
           AEK+N +WS+  SEN P++  +  PS      G D VV KY ASGLNREAV +AVA +GD
Sbjct: 121 AEKDNPDWSKFGSENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGD 180

Query: 181 NPTKVREFVNGFTLLREMGFPSNNVAEALLMHDNDTDKALAHFLNSSS 223
           NPTKV+EF NGFT +REMGFP+N VA+AL M +NDTDKALAH L+ SS
Sbjct: 181 NPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221

The following BLAST results are available for this feature:

BLAST of Spo16035.1 vs. NCBI nr
BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
BLAST of Spo16035.1 vs. ExPASy Swiss-Prot
BLAST of Spo16035.1 vs. TAIR (Arabidopsis)

BLAST of Spo16035.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238751\|gb\|KNA25301.1\|	6.4e-122	100.	hypothetical protein SOVF_0078...	[more]
gi\|731321795\|ref\|XP_010671545.1\|	5.8e-91	80.0	PREDICTED: uncharacterized pro...	[more]
gi\|255545086\|ref\|XP_002513604.1\|	2.1e-72	67.4	PREDICTED: uncharacterized pro...	[more]
gi\|225462713\|ref\|XP_002267522.1\|	1.8e-71	66.6	PREDICTED: uncharacterized pro...	[more]
gi\|719985939\|ref\|XP_010251549.1\|	3.9e-71	67.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo16035.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0L3_SPIOL	4.4e-122	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQS2_BETVU	4.0e-91	80.0	Uncharacterized protein OS=Bet...	[more]
B9RIN5_RICCO	1.4e-72	67.4	Putative uncharacterized prote...	[more]
A5APR3_VITVI	1.2e-71	66.6	Putative uncharacterized prote...	[more]
A0A0B0P5B7_GOSAR	8.2e-68	64.0	Ubiquitin-associated 1 OS=Goss...	[more]

BLAST of Spo16035.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo16035.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G53330.1	6.2e-59	55.7	Ubiquitin-associated/translati...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009060	UBA-like	unknown	SSF46934	UBA-like	coord: 182..220 score: 8.6
IPR015940	Ubiquitin-associated domain	PROFILE	PS50030	UBA	coord: 178..220 score: 8
None	No IPR available	GENE3D	1.10.8.10		coord: 188..218 score: 9.
None	No IPR available	PANTHER	PTHR15960	FAMILY NOT NAMED	coord: 13..222 score: 1.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding