Spo16533.1 (mRNA) | SpinachBase

Overview


Name	Spo16533.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	chr4 : 77826 .. 81102 (-)
Sequence length	1081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGCCAAACTAAAAACTAGAGAGAGAAAGAAATTTTCATTTTGCGCCATCAAATAAATCACCCAAAATTTGAGTGCCATAACCAAATCAGTGAATTTGAGCCCTCATAACCCAAAAATTTCAAGAAAAATCAAAACCCTCCATCGTTTTCTCTTTCCTCCATCGTTCTCTCTCTTCAGAACCAGAACAAACTTCTCTGATTCAACATCAACAATGGAGGGTGAGAAAAACTTGAATTTCCGACAAGGTTTCCCTCTTTCTCTCTTTAGATTTTCGATTTTATGGTTTATGATGGAATGATGTTAATATGGCAATTTTAATTTAAGTTTAGTTGAGTATAGTGAAATTTGAGTAGAATCAATTTGCTGAAATCGATCGAATTTGGAGATGAATTTCCGTAATTTAGGGTTTGAGAGGAGAGAGAAAAAGGATTTCAATTTTGATGTGAGTTTTTTTAACCCATAGTTTTATGTTTCTGGGTTATATTTTAACGCCTATTTAAGAAACTAAAAATACCCAATTGCTTCAATTTTGATTTTTGGTTGTAGGTTTGCTGGTAGGAATCGTTGGTCTCAGATTGATTGTAGGAAGTGTTGCAGTGATCCTGGGCCTTTTCCATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGTTAGATACACCGCTTAAGGTAGCAATTTTGTTGACTTTGCCAGCTCTTGCTGCTATTTGGTTGGCTTTGAGCATACCAGGAAGTGTTATTGTGGGTGTGGATTATGAATTTTTCACTCCTTGGGTTTCAACTTACTTTTGCTTTATTTTTATTTATTTTATCTGGCATGTAGTAGTAATCACCAGTATATATGGTTAAATGGTTTGCATCCCATCTGCTGCTCTATGGAACCAAGTTGATTGCCTTGCGCACGTGTATTGGCTAAATGAATTCTTCTTAGAACAAATCATGCAGCTTTTTTAGTTGAATTTCTATTTTTAACTTGTTAATCTCAATTAAATATTTGTATGAGTTCACCAATATATCCATGGCTACTATTGCAAATAAATGAATAACAGTCCAACATTTTTTTATTTGGCCCCTCTATAAAGGTATTGGGAACACAATGTACTGAAGTCAAAACAAATTCTTTAAATAATATTTCAAATCTCTGTTTGAGACTTTGAATAATACTCCGTATTCACAATGTCTGAGATTGAGTTTTATCAAATTAGATTATAACGTCTTTAACATGACAAGCATTTATAATAATGCTAGAAAAATACGTGATACTTTTTAAGATCAACTAGAATGTTAATTTCACATAATAACTGAAATTCAACACTACCAGGTTAGATACACAGCTTAAGGTAACAATTTTGTTGGCTTTGCCAGCTCTTGCTGCTATTTGGTTGGCTCTGAGCATATCAGGAAGTGTTATTGTGGGTGTGGGTTATGAATTTTTCACTCCTTGGGTTTCAGCTTTTAAGCCCTTTAGACAAGAGAATGAATCCAATAAATTCTTACACTGCATTGTGATAATTTTCTGAAGTGGCATGTTTTTCTTTATATATTTTCCTTCCTTAGTTGATTTTGTTAAAACTGTTTTTCTCCAACAATTAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGGTGGGTATTACCGTATTACTTGTGATGATCAGAACCTAATCTGATTAACTTAAAATGAGGATAAACATCTAACTTCTTCAAATGTGTATTTAAGCCTTATTCTCTTCACCGCATTTGTTTTATTGTCCGTATAAAAGGACAGTTTGGAATTAGAAAGTAGTGGATTGCGTAGAGTTTTGTTGTGTAAAAGAAGACTAGAACCATGGTTCATTTGTGGTTGCTAAACAAGGGATTTCATATGCATGCTTTTGGTTTGTTAGATAGATATTCTAGCTAAGTTAACCTTGCTAATATGTTCTGGCTATCATGCAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGGTTTTCCACTTTCTCTCTTTAATTGTCTTTTCGATTTCATGTTTTGTGATAATCTCTGTTGAGTTCTCATCTGTTTCAGTATAGATGATGACTCTAGTAAGAACTTCTAATTTGTTTATTAGACTGTTTGAGGTTTAGTGTAGTCTAAACTCTAAACAAACATTAAGCTTATCGTAATCTCCAGTCACGTAAAAACTTATCATAATCTCCAGCCGGGTAAAAATAATTAGTCCTAGATTAGTCCTAGAAGGATAATAATTAGAATTGGACTACAATTCTAATATTGGTATATTAGTCCTAGAGTGTAGGCTAGATTTGGATTCCTAAGTATTAGCAGTAGTATTAGATTACAATGCTACGTTATCCTAAGTCTAGAAGGAGTATAATTAGTCTTTAGCTTGTACTATATATATCTTGCTCATGATCATCAACATAATTCCAAGCTTTAAGCGTCAATAATGATCTTCTTAACTTACCAATGTCAATAATAATAAGCTTTAATGCAAAAAATTTTTAGGAAGCTTTATTTGCTTGTCCACTTTAGTAATTAACTTTGTTGAATCTATGGTTCCTTTCTGTTTCAATTCTGCATTTTTTTTTTAATATATGTTAATAAGAAATCTACCATGTCTGCTTGTAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAGCTCTCAAAGTCTAATGAAAAACTAGTTTTAGAGTACCAAATTCATTTACTTTCTTGTAAAATGGTATTGAAAATTTAAAGTCGTGTACCAAATAACTTGATTTAGTTCATTTACCATCTTGTAAAATGGAATTGAAAATTTAGAGTCAATTACCAAATTTATTTACTATGTTGTAAAATGGTATTGGAAATGGTACTGAAAATTTACCGTCGAGTACCAAAT

mRNA sequence

AGCGCCAAACTAAAAACTAGAGAGAGAAAGAAATTTTCATTTTGCGCCATCAAATAAATCACCCAAAATTTGAGTGCCATAACCAAATCAGTGAATTTGAGCCCTCATAACCCAAAAATTTCAAGAAAAATCAAAACCCTCCATCGTTTTCTCTTTCCTCCATCGTTCTCTCTCTTCAGAACCAGAACAAACTTCTCTGATTCAACATCAACAATGGAGGGTGAGAAAAACTTGAATTTCCGACAAGGTTTGCTGGTAGGAATCGTTGGTCTCAGATTGATTGTAGGAAGTGTTGCAGTGATCCTGGGCCTTTTCCATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAGCTCTCAAAGTCTAATGAAAAACTAGTTTTAGAGTACCAAATTCATTTACTTTCTTGTAAAATGGTATTGAAAATTTAAAGTCGTGTACCAAATAACTTGATTTAGTTCATTTACCATCTTGTAAAATGGAATTGAAAATTTAGAGTCAATTACCAAATTTATTTACTATGTTGTAAAATGGTATTGGAAATGGTACTGAAAATTTACCGTCGAGTACCAAAT

Coding sequence (CDS)

ATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAG

Protein sequence

MYMLLGRFTIDKFDQFLLLLIVEFAEIQHYQDGTWDTVKRSCVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPIVARLKRSGKHEKEWQTRKSHQAANEILVLRCKNVGLHSNASVNRY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo16533	Spo16533	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo16533.1	Spo16533.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16533.1.utr5p.2	Spo16533.1.utr5p.2	five_prime_UTR
Spo16533.1.utr5p.1	Spo16533.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16533.1.CDS.4	Spo16533.1.CDS.4	CDS
Spo16533.1.CDS.3	Spo16533.1.CDS.3	CDS
Spo16533.1.CDS.2	Spo16533.1.CDS.2	CDS
Spo16533.1.CDS.1	Spo16533.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16533.1.utr3p.1	Spo16533.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16533.1.exon.5	Spo16533.1.exon.5	exon
Spo16533.1.exon.4	Spo16533.1.exon.4	exon
Spo16533.1.exon.3	Spo16533.1.exon.3	exon
Spo16533.1.exon.2	Spo16533.1.exon.2	exon
Spo16533.1.exon.1	Spo16533.1.exon.1	exon

Homology

[Close]

BLAST of Spo16533.1 vs. NCBI nr
Match: gi|902114293|gb|KNA03843.1| (hypothetical protein SOVF_205270 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 190.3 bits (482), Expect = 3.000e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 121 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 180

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 181 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 225

[Close]

BLAST of Spo16533.1 vs. NCBI nr
Match: gi|902114292|gb|KNA03842.1| (hypothetical protein SOVF_205270 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 190.3 bits (482), Expect = 3.000e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 116 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 175

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 176 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 220

[Close]

BLAST of Spo16533.1 vs. NCBI nr
Match: gi|731373395|ref|XP_010666634.1| (PREDICTED: uncharacterized membrane protein At3g27390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 184.9 bits (468), Expect = 1.300e-43
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDTVK SC VVRDFADICIHSYPVYL E+RES++S+ELQTLRF H+PAII+VGLMGL
Sbjct: 137 DGTWDTVKGSCTVVRDFADICIHSYPVYLTEIRESSNSDELQTLRFIHIPAIIIVGLMGL 196

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           I+D+PSF  IAI  SPLMLLKGWQRLTHDLISRQGPFLET CIPI
Sbjct: 197 IIDVPSFIAIAIIKSPLMLLKGWQRLTHDLISRQGPFLETACIPI 241

[Close]

BLAST of Spo16533.1 vs. NCBI nr
Match: gi|747102011|ref|XP_011099151.1| (PREDICTED: uncharacterized membrane protein At3g27390 [Sesamum indicum])

HSP 1 Score: 165.6 bits (418), Expect = 7.900e-38
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYP+YLKE+RE+ SSNELQ LRF HVPA I+VGL+GL
Sbjct: 131 DGTWGTIKGSCTVVRDFADLCYHSYPIYLKELRENPSSNELQPLRFIHVPACIIVGLIGL 190

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           +V+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 191 VVEIPLYTAIAIVKSPFMLFKGWHRLLHDLISREGPFLETACIPI 235

[Close]

BLAST of Spo16533.1 vs. NCBI nr
Match: gi|703091492|ref|XP_010094373.1| (hypothetical protein L484_008261 [Morus notabilis])

HSP 1 Score: 164.5 bits (415), Expect = 1.800e-37
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYPVYLKE+RES  SNE+QTLR  HVPA I+VGLMGL
Sbjct: 133 DGTWGTIKGSCTVVRDFADLCHHSYPVYLKELRESPDSNEVQTLRLIHVPACIIVGLMGL 192

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IV+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 193 IVEIPLYTTIAIVKSPYMLFKGWFRLVHDLISREGPFLETACIPI 237

[Close]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAW9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_205270 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 121 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 180

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 181 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 225

[Close]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q979_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_205270 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 116 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 175

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 176 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 220

[Close]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4U3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003450 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.700e-44
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDTVK SC VVRDFADICIHSYPVYL E+RES++S+ELQTLRF H+PAII+VGLMGL
Sbjct: 137 DGTWDTVKGSCTVVRDFADICIHSYPVYLTEIRESSNSDELQTLRFIHIPAIIIVGLMGL 196

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           I+D+PSF  IAI  SPLMLLKGWQRLTHDLISRQGPFLET CIPI
Sbjct: 197 IIDVPSFIAIAIIKSPLMLLKGWQRLTHDLISRQGPFLETACIPI 241

[Close]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: W9QW47_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008261 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.200e-37
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYPVYLKE+RES  SNE+QTLR  HVPA I+VGLMGL
Sbjct: 133 DGTWGTIKGSCTVVRDFADLCHHSYPVYLKELRESPDSNEVQTLRLIHVPACIIVGLMGL 192

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IV+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 193 IVEIPLYTTIAIVKSPYMLFKGWFRLVHDLISREGPFLETACIPI 237

[Close]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: W1NMM4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00126p00089850 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.600e-37
Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 1


		  
Query: 23  EFAEIQH-YQDGTWDTVKRSCVV-RDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVP 82
           EF +  H   DGTWDT+K SCVV RDFADIC HSYP+YLKE  E T+S+E QT+R   VP
Sbjct: 127 EFTKFSHCVVDGTWDTIKGSCVVVRDFADICYHSYPLYLKETSERTTSDEPQTIRLMEVP 186

Query: 83  AIIVVGLMGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
             I++GLMGLIV+IP FT+IA+  SP ML KGWQRL HDL+SR+GPFLET C+PI
Sbjct: 187 KCIIIGLMGLIVEIPLFTIIAVTKSPFMLFKGWQRLLHDLVSREGPFLETACVPI 241

[Close]

BLAST of Spo16533.1 vs. ExPASy Swiss-Prot
Match: Y3739_ARATH (Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.400e-25
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 1


		  
Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW T++RS  VVRDF D+C HSY   + E+++S    +   +R   +P  +VV ++
Sbjct: 131 FYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++AI  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237

[Close]

BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT4G37030.1 (unknown protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.100e-36
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 1


		  
Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VV DFAD C HSYP+YLKE+RES  S+ELQTLR  HVP  I+VG++GL
Sbjct: 134 DGTWGTIKGSCIVVTDFADFCYHSYPLYLKELRESPVSDELQTLRLIHVPGCIIVGILGL 193

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           ++DIP FT IA+  SP +LLKGW RL  D I+R+GPFLE  CIP+
Sbjct: 194 VIDIPLFTAIAVIKSPYLLLKGWYRLAQDAINREGPFLEIACIPV 238

[Close]

BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT3G27390.1 (unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.900e-26
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 1


		  
Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW T++RS  VVRDF D+C HSY   + E+++S    +   +R   +P  +VV ++
Sbjct: 131 FYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++AI  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237

[Close]

BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT5G40640.1 (unknown protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.500e-26
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 1


		  
Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW TV+ S  VV DF D+C HSY  ++ ++R ST++     +R   +P  ++V ++
Sbjct: 131 FYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTANRHYYEIRLLQIPGAVIVAVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++A+  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237

[Close]

BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT4G12680.1 (unknown protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.800e-23
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 1


		  
Query: 30  YQDGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSN-ELQTLRFFHVPAIIVVGL 89
           + DG++ T+K SC VV DF D C HSY  Y+ E+RE  S++ E   ++   +P+ ++  L
Sbjct: 131 FVDGSFSTIKGSCTVVTDFTDFCFHSYFSYMDELREMVSADVEPLEIKLSRLPSCLLASL 190

Query: 90  MGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIP 135
           +G++VD+   T +A+  SP MLLKGW+RL  DL+ R+GPFLE+ C+P
Sbjct: 191 IGVMVDVLLITAVAVYKSPYMLLKGWKRLLEDLVGREGPFLESVCVP 237

The following BLAST results are available for this feature:

BLAST of Spo16533.1 vs. NCBI nr
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
BLAST of Spo16533.1 vs. ExPASy Swiss-Prot
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)

BLAST of Spo16533.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902114293\|gb\|KNA03843.1\|	3.0e-45	89.5	hypothetical protein SOVF_2052...	[more]
gi\|902114292\|gb\|KNA03842.1\|	3.0e-45	89.5	hypothetical protein SOVF_2052...	[more]
gi\|731373395\|ref\|XP_010666634.1\|	1.3e-43	83.8	PREDICTED: uncharacterized mem...	[more]
gi\|747102011\|ref\|XP_011099151.1\|	7.9e-38	73.3	PREDICTED: uncharacterized mem...	[more]
gi\|703091492\|ref\|XP_010094373.1\|	1.8e-37	75.2	hypothetical protein L484_0082...	[more]

BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QAW9_SPIOL	2.1e-45	89.5	Uncharacterized protein (Fragm...	[more]
A0A0K9Q979_SPIOL	2.1e-45	89.5	Uncharacterized protein (Fragm...	[more]
A0A0J8B4U3_BETVU	8.7e-44	83.8	Uncharacterized protein OS=Bet...	[more]
W9QW47_9ROSA	1.2e-37	75.2	Uncharacterized protein OS=Mor...	[more]
W1NMM4_AMBTC	3.6e-37	66.0	Uncharacterized protein OS=Amb...	[more]

BLAST of Spo16533.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
Y3739_ARATH	3.4e-25	48.6	Uncharacterized membrane prote...	[more]

BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G37030.1	2.1e-36	64.7	unknown protein	[more]
AT3G27390.1	1.9e-26	48.6	unknown protein	[more]
AT5G40640.1	2.5e-26	46.7	unknown protein	[more]
AT4G12680.1	5.8e-23	44.8	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31133	FAMILY NOT NAMED	coord: 32..135 score: 2.5
None	No IPR available	PANTHER	PTHR31133:SF4	SUBFAMILY NOT NAMED	coord: 32..135 score: 2.5