Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGTTTAATTAAGAAATAAAACCCATAATTTTGTTTTGGAAATTGACAGTTTTTTGGTGAAGTTTCAGGTGAAATGGGTGAAGTTGCATCACAAAATGGTATTTCTCTATACTTTGTCTTGTTAATTTTCTCATAAAATTGCATGAGTGATTAATTTTTGGATGTGATTAATTGTGGATTGTTCTAAGTTGGATTGTGGGTTTGGAATTACATGATAAGTAAAACTTTCTGAGAAGTTTGATTAGGAAGTGAGAAAAGTCGTTTAGTTGATCATAAAACTTTCCACAGAAAGCTCCAATAAGCAAGGGGTAGATAAACAACTTCCTCTATTTTGTGGGAGCTATATTGCCTAATGTTGTTATCAATTAAATAATTCCACATTTATCAATTTTAATGTCGACCAAACAGGCTTTGATTGATAGGGTTATTAGCGGTTTCTGTAGTTACTTGTCTATTTCTTAGGGATGACTTCTGCTTGTTGCTTAAGTTGGAGGCCCTCAAATATTTGCCAAGGATGGATATTGTTAGTAGCTCTTGAAACTGAAACTTATGTTTGTTTAGGTAATACCGCAATGGTGGTGGACATGCGATCAGATACAGTGACGAAACCAACAGAAGCAATGCGTACTGCAATGGCAAATGCTGAGGTTGATGACGACGTGTTGGGTTATGACCCAACTGCTCTTCGCCTTGAAACAGAGATGGCAAGAATCATGGGCAAAGAGGCAGGGCTTTTTGTTCCATCAGGGACTATGGGAAATCTCATTAGTGTACTTGTACATTGTGAAGTCAGGGGAAGTGAAGTCATTCTTGGAGATATCTCTCATATCCATATTTATGAGAATGGTGGTATTTCTACCCTTGGTGGGGTCCATCCCAGAACGGTTAAGAATAACAAGGACGGTACAATGGATTTGGAGTTGATTGAAGCTTCCATTAGAGATCCTAATGGGGAACTTTTTTATCCTATGACTAGACTTATTTGCATTGAAAACTCCCATGCAAAGTAACTAGTATTCTTCTTCTTTTTTTACTTTCACTTGCTCATTTACAGAGATTTACCCTTACTTCAATAATAACCCATAGTTGCTGTTCTACTGCAGCTCTGGTGGTCGATGCCTTTCTCTAGAGTACACAGACAAAGTTGGAGAGTTGGCAAAGAAGCATGGTCTCAAGCTTCATATTGATGGGGCTCGTATCTTCAATGCTGCTACAGTGAGTGGAAACTTCTACTCCGTATAAAACAATCTTGATTTTATATAATCATGGTTCTAAAATAGAAAACCCATTTAACTTGGGAATTCACCTCAATAGACTAAGCACCCATAGTAGTAATTAGGATTTATGAGTAAACTACAAAGTACTCAGTAAAATATAAGAAAAGGGAATTGCATAAGTGTTAATCTCTGATGGCATGTAGAGTATGTCATCTGCCTTTAGTAGATATACTGTCATATGGTTGATTGTGTCATCTTATTTCCCTCTCTTCTCTTCTGATTAACTCGGTTATCAATAAAATGATAATGACTTGTTGGTTAGTGTAAGTTAAATTCATTCGCAACTTCTGTTGTGTGGAAAATATGGTGTATTCCAAAGTCCTTTAACTAAGGTTTTGTTCTTTCCTTGTACCTTGAGTTGAGTTTTGGTATAGAGTGGAATCAGGAGATATCCGTTCAAGTTTCTGGCTCACTCATCTATTTATGATTTTCAATTTTAGATGCATATGTTACTGTAGTAATTAATTCCATACACGTAATTCTAGATGCATATCATTTTTAATTTTAGATGCATATGATTTGTAATTTTAGATGCATATGGGTTTGCAGGCACTTGGGGTTCCTGTTGATAGACTGGTGCAAGCAGCTGACTCAGTATCGGTAATTTTGTTGCTATAGTTGTAATTCCCGGTCATCAGAAATTTCCGTTTACACAGACCTTTTAGCATCTTGTTTATGTTTCAAGAGGAATCACAGCTTGTTGAAACTCTTAAAATGTTTTGGAAACTTGAACATCCATTTTGCAAGCTTCTGATGCTAACTTATTCTGTAATCATTTCTCTTAAACCATGTTAACTTGTGGCACATGACTTAAGGTATGCCTCTCAAAATCTCTTGGAGCACCTGTGGGAACTGTGATTGTTGGATCAAAGAGCTTTATAACCAAGGTATCATCACTTAAGCTTGAAACCATATGTTGATATGTAGTAACTTTTGTCTAATTTAGATTTAAATGCTTAGGCAAAGACTTTGAGGAAAGCTTTAGGTGGCGGGATGAGACAGATTGGTATCTTGTGTGCTGCTGCATTGGTTGCAGTGCAAGACAATGTGAAAAAGCTTGAGGAAGACCATAAGAACACTAAGCTATTAGCAGGTTATCCATCTTCCTAGGCCTATATATATTCATGCTTTTAAACTTGTGTAGTTTTCCCTTGTTTTAACTCGTTTCTGGTGATATCTTGTATGACAGAAGGATTGAACCAGATAGCAGGGATAAAAGTTGATATGAGTGCAGTTGAGACAAACATTGTGAGTAATCTGCAAACTAGAACGGACACAAAACATCCTTTCCCTAACCCCTCATTCACCAGAATTTGAGCATATAAACTGAACTGAACTGAACTTTGGAGTTAGGACACCTTATCACATGGATATGACTGTGTAAAGTCACTATGCATGCTAGTTAACAGAGTATATTGTGCTTTCCCTCAGGTGTTTGTCAACGTATGTGAGAGCTCGAATACAACTGCACCAAAACTTTGCAAGCACTTGGAGGACCATGGTGTATTGGTTATGCTAGAGAACACCTACAGGTCAGTTTTTTTTTTTAAAAAAAATCTTTAATCATGCAGCATCTTCCATTCTTCTTCAAATCACTAAGGTTTGCGACATGCATTTCTGGTAATAATGTATTTCTGTAAAGTTCGCTACTTTTTCTTTCTTTTTCTTCATTTTGAAGAACGCCATAATTCTTTCTTGTTCCTTTCGTCAGAAGCTGAAATTGTTAATTTTTTCCCCAGAATGAGGATGGTTATTCACCATCAAATCACCGAAAATGATGTGAAGCATACTTTGTCATGTTTGAGGGTAAATTCAAGTCCATTCTTCTACAGTATTTCTCCCTTTGTTGATTTCTTTTGGTTTTTCTCTTCAGACAATCAGCAGAATATAATCCCATGCTGTTAATAATCCCAACTCAAGATTTCACACTAGATAATCTCAACTATGAGAATTGTTCAAAAACTATCTACCATTATGTTTTGCCTTAGATTCATCAAAAATACTAAGTAACCCCAGTGCAAAAATATCATTTGTTCTATCAATATTCGATTTACGAAACTTGGTCTTGTTTTGAATATGACAGCAAGCGATAACTGGGGCATCAAGTGAACATATTGACAAGTGAGAGGAATTGAACTGCACCTCGGCATTTACTGATTATTAGGTGAATGATCTGTAGACTGTGAAATCTAATTTTATGTGATGATTCATGAAGAACTATGTGTAACAAAAGTATGTGAACTATAAATATAGTGTGTCCTATTTTACATTCGATGTGTGTCTGTGAGATTGTCCTAGTACATAAAAGAGTCCTGACAGTTTTGTGATTTTTACGCATGACAACTAGAGCCATAAAATATAACACATACAGGAATTCGCCATGGATTTACCATGCCGGGAAATCTAAACCTATATGTACTTCACCCATCTACCAATTCGGGATTGTAACTTGAGTCGATATTTTGTTGAATGCACATATCATAAAACGAGCCATATAAAACTCTTGTTTATAAGACTCACAGCTTCAATATTATGAAAAAAGCATGTGTACATTATGAATATAATGTGCAAAGTTGATCATTTAGGATCAGGAATGGAACCAACTCATGACTTTTAAAACAATTTTTTCTTCTGCAATGATTTTAGGATCTTCACTCTAAGACACGTTCGCCTTCACCATTATTAGTATTTCGTTTATGACAATAATCAGCAACAACCTCTTTAGTGATTTTAGTGCTGCCAATATGAGCCATGCTTTCTTCTTTGAAAGGCGGATCTGTTTAGTGGTGGCAATAAAGGTAGCAAGGAAATCACAGACATGTTGTGTACTCATTTGTAGCATATTGAGCCATCAACGCGTCTCCTGTGTGACAAGCCACACCATCAACTTGATGGTTTCACGCTCACGCGTAACTATACTATGGAGAAGGTTATTGAGGGGTGTTAATAATATTTTGTATTCGTTGTTACTTTTGTTGTTTTATTACAGTTACTTGAATTTCATGTTAGAGTTTACTTGTATAAAAAATATT AAGGGTTTAATTAAGAAATAAAACCCATAATTTTGTTTTGGAAATTGACAGTTTTTTGGTGAAGTTTCAGGTGAAATGGGTGAAGTTGCATCACAAAATGGTAATACCGCAATGGTGGTGGACATGCGATCAGATACAGTGACGAAACCAACAGAAGCAATGCGTACTGCAATGGCAAATGCTGAGGTTGATGACGACGTGTTGGGTTATGACCCAACTGCTCTTCGCCTTGAAACAGAGATGGCAAGAATCATGGGCAAAGAGGCAGGGCTTTTTGTTCCATCAGGGACTATGGGAAATCTCATTAGTGTACTTGTACATTGTGAAGTCAGGGGAAGTGAAGTCATTCTTGGAGATATCTCTCATATCCATATTTATGAGAATGGTGGTATTTCTACCCTTGGTGGGGTCCATCCCAGAACGGTTAAGAATAACAAGGACGGTACAATGGATTTGGAGTTGATTGAAGCTTCCATTAGAGATCCTAATGGGGAACTTTTTTATCCTATGACTAGACTTATTTGCATTGAAAACTCCCATGCAAACTCTGGTGGTCGATGCCTTTCTCTAGAGTACACAGACAAAGTTGGAGAGTTGGCAAAGAAGCATGGTCTCAAGCTTCATATTGATGGGGCTCGTATCTTCAATGCTGCTACAGCACTTGGGGTTCCTGTTGATAGACTGGTGCAAGCAGCTGACTCAGTATCGGTATGCCTCTCAAAATCTCTTGGAGCACCTGTGGGAACTGTGATTGTTGGATCAAAGAGCTTTATAACCAAGGCAAAGACTTTGAGGAAAGCTTTAGGTGGCGGGATGAGACAGATTGGTATCTTGTGTGCTGCTGCATTGGTTGCAGTGCAAGACAATGTGAAAAAGCTTGAGGAAGACCATAAGAACACTAAGCTATTAGCAGAAGGATTGAACCAGATAGCAGGGATAAAAGTTGATATGAGTGCAGTTGAGACAAACATTGTGTTTGTCAACGTATGTGAGAGCTCGAATACAACTGCACCAAAACTTTGCAAGCACTTGGAGGACCATGGTGTATTGGTTATGCTAGAGAACACCTACAGAATGAGGATGGTTATTCACCATCAAATCACCGAAAATGATGTGAAGCATACTTTGTCATGTTTGAGGCAAGCGATAACTGGGGCATCAAGTGAACATATTGACAAGTGAGAGGAATTGAACTGCACCTCGGCATTTACTGATTATTAGGATCTTCACTCTAAGACACGTTCGCCTTCACCATTATTAGTATTTCGTTTATGACAATAATCAGCAACAACCTCTTTAGTGATTTTAGTGCTGCCAATATGAGCCATGCTTTCTTCTTTGAAAGGCGGATCTGTTTAGTGGTGGCAATAAAGGTAGCAAGGAAATCACAGACATGTTGTGTACTCATTTGTAGCATATTGAGCCATCAACGCGTCTCCTGTGTGACAAGCCACACCATCAACTTGATGGTTTCACGCTCACGCGTAACTATACTATGGAGAAGGTTATTGAGGGGTGTTAATAATATTTTGTATTCGTTGTTACTTTTGTTGTTTTATTACAGTTACTTGAATTTCATGTTAGAGTTTACTTGTATAAAAAATATT ATGGGTGAAGTTGCATCACAAAATGGTAATACCGCAATGGTGGTGGACATGCGATCAGATACAGTGACGAAACCAACAGAAGCAATGCGTACTGCAATGGCAAATGCTGAGGTTGATGACGACGTGTTGGGTTATGACCCAACTGCTCTTCGCCTTGAAACAGAGATGGCAAGAATCATGGGCAAAGAGGCAGGGCTTTTTGTTCCATCAGGGACTATGGGAAATCTCATTAGTGTACTTGTACATTGTGAAGTCAGGGGAAGTGAAGTCATTCTTGGAGATATCTCTCATATCCATATTTATGAGAATGGTGGTATTTCTACCCTTGGTGGGGTCCATCCCAGAACGGTTAAGAATAACAAGGACGGTACAATGGATTTGGAGTTGATTGAAGCTTCCATTAGAGATCCTAATGGGGAACTTTTTTATCCTATGACTAGACTTATTTGCATTGAAAACTCCCATGCAAACTCTGGTGGTCGATGCCTTTCTCTAGAGTACACAGACAAAGTTGGAGAGTTGGCAAAGAAGCATGGTCTCAAGCTTCATATTGATGGGGCTCGTATCTTCAATGCTGCTACAGCACTTGGGGTTCCTGTTGATAGACTGGTGCAAGCAGCTGACTCAGTATCGGTATGCCTCTCAAAATCTCTTGGAGCACCTGTGGGAACTGTGATTGTTGGATCAAAGAGCTTTATAACCAAGGCAAAGACTTTGAGGAAAGCTTTAGGTGGCGGGATGAGACAGATTGGTATCTTGTGTGCTGCTGCATTGGTTGCAGTGCAAGACAATGTGAAAAAGCTTGAGGAAGACCATAAGAACACTAAGCTATTAGCAGAAGGATTGAACCAGATAGCAGGGATAAAAGTTGATATGAGTGCAGTTGAGACAAACATTGTGTTTGTCAACGTATGTGAGAGCTCGAATACAACTGCACCAAAACTTTGCAAGCACTTGGAGGACCATGGTGTATTGGTTATGCTAGAGAACACCTACAGAATGAGGATGGTTATTCACCATCAAATCACCGAAAATGATGTGAAGCATACTTTGTCATGTTTGAGGCAAGCGATAACTGGGGCATCAAGTGAACATATTGACAAGTGA MGEVASQNGNTAMVVDMRSDTVTKPTEAMRTAMANAEVDDDVLGYDPTALRLETEMARIMGKEAGLFVPSGTMGNLISVLVHCEVRGSEVILGDISHIHIYENGGISTLGGVHPRTVKNNKDGTMDLELIEASIRDPNGELFYPMTRLICIENSHANSGGRCLSLEYTDKVGELAKKHGLKLHIDGARIFNAATALGVPVDRLVQAADSVSVCLSKSLGAPVGTVIVGSKSFITKAKTLRKALGGGMRQIGILCAAALVAVQDNVKKLEEDHKNTKLLAEGLNQIAGIKVDMSAVETNIVFVNVCESSNTTAPKLCKHLEDHGVLVMLENTYRMRMVIHHQITENDVKHTLSCLRQAITGASSEHIDK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo16609.1 vs. NCBI nr
Match: gi|902202008|gb|KNA14150.1| (hypothetical protein SOVF_110180 [Spinacia oleracea]) HSP 1 Score: 723.0 bits (1865), Expect = 2.600e-205 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
BLAST of Spo16609.1 vs. NCBI nr
Match: gi|731366221|ref|XP_010694951.1| (PREDICTED: probable low-specificity L-threonine aldolase 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 628.6 bits (1620), Expect = 6.700e-177 Identity = 317/371 (85.44%), Postives = 344/371 (92.72%), Query Frame = 1
BLAST of Spo16609.1 vs. NCBI nr
Match: gi|255561931|ref|XP_002521974.1| (PREDICTED: probable low-specificity L-threonine aldolase 1 [Ricinus communis]) HSP 1 Score: 554.7 bits (1428), Expect = 1.200e-154 Identity = 273/351 (77.78%), Postives = 311/351 (88.60%), Query Frame = 1
BLAST of Spo16609.1 vs. NCBI nr
Match: gi|802758965|ref|XP_012089322.1| (PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X1 [Jatropha curcas]) HSP 1 Score: 548.5 bits (1412), Expect = 8.800e-153 Identity = 273/351 (77.78%), Postives = 309/351 (88.03%), Query Frame = 1
BLAST of Spo16609.1 vs. NCBI nr
Match: gi|802758978|ref|XP_012089323.1| (PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X2 [Jatropha curcas]) HSP 1 Score: 548.5 bits (1412), Expect = 8.800e-153 Identity = 273/351 (77.78%), Postives = 309/351 (88.03%), Query Frame = 1
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110180 PE=4 SV=1) HSP 1 Score: 723.0 bits (1865), Expect = 1.800e-205 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096540 PE=4 SV=1) HSP 1 Score: 628.6 bits (1620), Expect = 4.700e-177 Identity = 317/371 (85.44%), Postives = 344/371 (92.72%), Query Frame = 1
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Match: B9S7K5_RICCO (L-allo-threonine aldolase, putative OS=Ricinus communis GN=RCOM_0609060 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 8.600e-155 Identity = 273/351 (77.78%), Postives = 311/351 (88.60%), Query Frame = 1
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Match: A0A059B671_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04236 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 1.400e-152 Identity = 268/351 (76.35%), Postives = 314/351 (89.46%), Query Frame = 1
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Match: A0A059B5X1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04236 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 1.400e-152 Identity = 268/351 (76.35%), Postives = 314/351 (89.46%), Query Frame = 1
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Match: THA1_ARATH (Probable low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana GN=THA1 PE=1 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 1.500e-147 Identity = 253/344 (73.55%), Postives = 308/344 (89.53%), Query Frame = 1
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Match: THA2_ARATH (Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana GN=THA2 PE=1 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 1.300e-140 Identity = 244/346 (70.52%), Postives = 298/346 (86.13%), Query Frame = 1
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Match: LTAA_AERJA (L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 5.700e-75 Identity = 158/342 (46.20%), Postives = 225/342 (65.79%), Query Frame = 1
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Match: YF64_CAEEL (Uncharacterized protein R102.4 OS=Caenorhabditis elegans GN=R102.4 PE=3 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 1.900e-70 Identity = 149/347 (42.94%), Postives = 217/347 (62.54%), Query Frame = 1
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Match: LTAE_ECOLI (Low specificity L-threonine aldolase OS=Escherichia coli (strain K12) GN=ltaE PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 6.500e-63 Identity = 133/334 (39.82%), Postives = 205/334 (61.38%), Query Frame = 1
BLAST of Spo16609.1 vs. TAIR (Arabidopsis)
Match: AT1G08630.1 (threonine aldolase 1) HSP 1 Score: 523.9 bits (1348), Expect = 8.200e-149 Identity = 253/344 (73.55%), Postives = 308/344 (89.53%), Query Frame = 1
BLAST of Spo16609.1 vs. TAIR (Arabidopsis)
Match: AT3G04520.1 (threonine aldolase 2) HSP 1 Score: 500.7 bits (1288), Expect = 7.400e-142 Identity = 244/346 (70.52%), Postives = 298/346 (86.13%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16609.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16609.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16609.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16609.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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