Spo16640.1 (mRNA) | SpinachBase

Overview


Name	Spo16640.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Arabinogalactan protein 22, putative
Location	SpoScf_03058 : 1716 .. 3094 (-)
Sequence length	866

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTAATAATCCTAATTGACGTACAAGAATTTTCAACGCGTTCCTTCCACCCTACTCTCCTCTTTCAAAAAAGATCGGAACTTCCAGATTGAATTTCCTGCTCCCTAAAATTCTTATATATATACACCACCTAAACATCACATACGCCTCTCATCATTCAACATTTCAACACCATACAAACACGAAAATTATTTCACTTACCCCAAATCATATATTTATTTCTATTTCATTTTTTTATATAGAAAAACTTAGGAATATTATTAATCAATATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTATGTCTTTTCTCCTTCAATTCGACTCCAAACCCAAATTAACCTACTATTGATCAATCAAGAGTCGAAATAACATAGATTCAACCAATAGACGATCCGGATTTAACCCGGCCAACTCCTAATTTGATGTAGAGGAGGGAGATTCGAACCTGAGATCTATTGCACATACAAACCGAAATTAGCTAATATCTCATTGGTAGATTTTTACCAATTGGATACAACTGAGTCTTTTTGAATTTTTACTTCTTTAGAAAGCACGTTTTTATTGTTTAAATGCACATTTAACCGTTAAAATCGCATTTTTACAAAAAAGTACATCCTCTTTACGAGAACAAAAAAATATATGTGCTTTTAAACTGAAAAAGAATGTTTTTTTAACCCGGTTATATGTAGAGCTACATACAACCGGATACACCTTCTAATTTGTGGATTTTTACAAGCGGTGGTAGTTATTTTCGGTTATTTTTATTGATATTGATGATTTACCGGGAATTTTTTTATTTTTGTTTGCAGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAAATTAAAATCGTGATTCAGTTTAGATTAATTTTTTTTATTTAATTTAAGTAATTATTTTTACACTTTAGTTTATATTTAAAATTAACATGAATATTATGTATAGGTCCGAGAAATTCTTTAGCTACGGGGGAAGAATTGCAGTGATTTTGTATTCTTTTCGAGTTTCTTCTAAACTTGTAATAATAAGTAAATAAAATACGGTATCTCTTTATTTATGAATTTTATTCTTTTTTGCAACCATATATTATATATATACTTGAGAATATCATTGCGATTTTATGGTTAATTACATGATTAATCATTAATGGACTAGTTAATTGCCGTATATTGAGAAATTCAACATTTGTCGAATACAGTATGTTTTCTTCTAGCTTTTGGTGAACGGGA

mRNA sequence

GTCTAATAATCCTAATTGACGTACAAGAATTTTCAACGCGTTCCTTCCACCCTACTCTCCTCTTTCAAAAAAGATCGGAACTTCCAGATTGAATTTCCTGCTCCCTAAAATTCTTATATATATACACCACCTAAACATCACATACGCCTCTCATCATTCAACATTTCAACACCATACAAACACGAAAATTATTTCACTTACCCCAAATCATATATTTATTTCTATTTCATTTTTTTATATAGAAAAACTTAGGAATATTATTAATCAATATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAAATTAAAATCGTGATTCAGTTTAGATTAATTTTTTTTATTTAATTTAAGTAATTATTTTTACACTTTAGTTTATATTTAAAATTAACATGAATATTATGTATAGGTCCGAGAAATTCTTTAGCTACGGGGGAAGAATTGCAGTGATTTTGTATTCTTTTCGAGTTTCTTCTAAACTTGTAATAATAAGTAAATAAAATACGGTATCTCTTTATTTATGAATTTTATTCTTTTTTGCAACCATATATTATATATATACTTGAGAATATCATTGCGATTTTATGGTTAATTACATGATTAATCATTAATGGACTAGTTAATTGCCGTATATTGAGAAATTCAACATTTGTCGAATACAGTATGTTTTCTTCTAGCTTTTGGTGAACGGGA

Coding sequence (CDS)

ATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAA

Protein sequence

MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo16640	Spo16640	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo16640.1	Spo16640.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16640.1.utr5p.1	Spo16640.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16640.1.CDS.2	Spo16640.1.CDS.2	CDS
Spo16640.1.CDS.1	Spo16640.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16640.1.utr3p.1	Spo16640.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16640.1.exon.2	Spo16640.1.exon.2	exon
Spo16640.1.exon.1	Spo16640.1.exon.1	exon

Homology

[Close]

BLAST of Spo16640.1 vs. NCBI nr
Match: gi|870850988|gb|KMT03054.1| (hypothetical protein BVRB_8g196160 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 95.9 bits (237), Expect = 2.900e-17
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1


		  
Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+ KV  GQ M PSPA LPPSNDGA IDQGIAY LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAILKVAQGQMMVPSPAPLPPSNDGAAIDQGIAYFLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 68

[Close]

BLAST of Spo16640.1 vs. NCBI nr
Match: gi|870850984|gb|KMT03050.1| (hypothetical protein BVRB_8g196120 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 92.4 bits (228), Expect = 3.200e-16
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1


		  
Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+FKV  GQ M PSPA LPP NDGA IDQGIAY+LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAIFKVAQGQMMVPSPAPLPP-NDGAAIDQGIAYVLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 67

[Close]

BLAST of Spo16640.1 vs. NCBI nr
Match: gi|661893536|emb|CDP03345.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 83.6 bits (205), Expect = 1.500e-13
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 1


		  
Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTM-APSPAAL-PPSNDGATIDQGIAYLLLVVALAV 66
          +S R + LPIIGF+M+ALF+++ GQ++ APSPA + PPSNDGA IDQG+AY+LLVVALA+
Sbjct: 2  NSARSFALPIIGFIMLALFELSRGQSITAPSPAPIGPPSNDGAAIDQGVAYVLLVVALAI 61

Query: 67 TYIIH 70
          TY++H
Sbjct: 62 TYLVH 66

[Close]

BLAST of Spo16640.1 vs. NCBI nr
Match: gi|643724455|gb|KDP33656.1| (hypothetical protein JCGZ_07227 [Jatropha curcas])

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-13
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1


		  
Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S +  Y LPIIGF+ +AL ++ HGQ +APSPAA  PS+DG TIDQGIAY+L++VALAVTY
Sbjct: 2  SPMNLYALPIIGFMFLALLQLGHGQAIAPSPAAEGPSSDGNTIDQGIAYVLMLVALAVTY 61

Query: 67 IIH 70
          + H
Sbjct: 62 LFH 64

[Close]

BLAST of Spo16640.1 vs. NCBI nr
Match: gi|223546779|gb|EEF48277.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 82.4 bits (202), Expect = 3.400e-13
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1


		  
Query: 6  SSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVT 65
          S+ ++ Y LPIIG ++ ALF++ + QTMAPSPAA  PS+DG +IDQGIAY+LL+VALAVT
Sbjct: 2  STPMKLYALPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQGIAYVLLLVALAVT 61

Query: 66 YIIH 70
          Y+ H
Sbjct: 62 YLFH 65

[Close]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196160 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.000e-17
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1


		  
Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+ KV  GQ M PSPA LPPSNDGA IDQGIAY LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAILKVAQGQMMVPSPAPLPPSNDGAAIDQGIAYFLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 68

[Close]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNW8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196120 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.300e-16
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1


		  
Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+FKV  GQ M PSPA LPP NDGA IDQGIAY+LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAIFKVAQGQMMVPSPAPLPP-NDGAAIDQGIAYVLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 67

[Close]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A068U472_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041895001 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.100e-13
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 1


		  
Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTM-APSPAAL-PPSNDGATIDQGIAYLLLVVALAV 66
          +S R + LPIIGF+M+ALF+++ GQ++ APSPA + PPSNDGA IDQG+AY+LLVVALA+
Sbjct: 2  NSARSFALPIIGFIMLALFELSRGQSITAPSPAPIGPPSNDGAAIDQGVAYVLLVVALAI 61

Query: 67 TYIIH 70
          TY++H
Sbjct: 62 TYLVH 66

[Close]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A067KBQ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07227 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.800e-13
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1


		  
Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S +  Y LPIIGF+ +AL ++ HGQ +APSPAA  PS+DG TIDQGIAY+L++VALAVTY
Sbjct: 2  SPMNLYALPIIGFMFLALLQLGHGQAIAPSPAAEGPSSDGNTIDQGIAYVLMLVALAVTY 61

Query: 67 IIH 70
          + H
Sbjct: 62 LFH 64

[Close]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: B9RKS9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053260 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.300e-13
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1


		  
Query: 6  SSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVT 65
          S+ ++ Y LPIIG ++ ALF++ + QTMAPSPAA  PS+DG +IDQGIAY+LL+VALAVT
Sbjct: 2  STPMKLYALPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQGIAYVLLLVALAVT 61

Query: 66 YIIH 70
          Y+ H
Sbjct: 62 YLFH 65

[Close]

BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.100e-7
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1


		  
Query: 16 IIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          +  F+   +  +   Q++AP+PA   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 12 LFSFVFAVILSLAGAQSLAPAPA---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-6
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1


		  
Query: 13 VLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          V+ +  F+   +      Q++AP+P+   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPAPS---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 8.900e-6
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1


		  
Query: 7  SSLRF--YVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAV 66
          +SL+F   +L +   + + L  +    + +P+PA   P++DG +IDQGIAY+L++VALA+
Sbjct: 2  ASLKFPLEILAVFVIISVILLPIAQSHSSSPAPA---PTSDGTSIDQGIAYVLMMVALAL 61

Query: 67 TYIIH 70
          TY IH
Sbjct: 62 TYFIH 63

[Close]

BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT5G24105.1 (arabinogalactan protein 41)

HSP 1 Score: 58.9 bits (141), Expect = 1.400e-9
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1


		  
Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S L F V  I+  +   L  + H Q+ AP+PA   P++DG TIDQGIAY+L++VAL +TY
Sbjct: 4  SRLFFGVSTIVSIIFAILLPMAHAQSAAPAPA---PTSDGTTIDQGIAYVLMLVALVLTY 63

Query: 67 IIH 70
          +IH
Sbjct: 64 LIH 63

[Close]

BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT2G46330.1 (arabinogalactan protein 16)

HSP 1 Score: 54.3 bits (129), Expect = 3.500e-8
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1


		  
Query: 16 IIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          +  F+   +  +   Q++AP+PA   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 12 LFSFVFAVILSLAGAQSLAPAPA---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT3G61640.1 (arabinogalactan protein 20)

HSP 1 Score: 53.1 bits (126), Expect = 7.700e-8
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1


		  
Query: 13 VLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          V+ +  F+   +      Q++AP+P+   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPAPS---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT5G53250.1 (arabinogalactan protein 22)

HSP 1 Score: 50.4 bits (119), Expect = 5.000e-7
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1


		  
Query: 7  SSLRF--YVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAV 66
          +SL+F   +L +   + + L  +    + +P+PA   P++DG +IDQGIAY+L++VALA+
Sbjct: 2  ASLKFPLEILAVFVIISVILLPIAQSHSSSPAPA---PTSDGTSIDQGIAYVLMMVALAL 61

Query: 67 TYIIH 70
          TY IH
Sbjct: 62 TYFIH 63

The following BLAST results are available for this feature:

BLAST of Spo16640.1 vs. NCBI nr
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
BLAST of Spo16640.1 vs. TAIR (Arabidopsis)

BLAST of Spo16640.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870850988\|gb\|KMT03054.1\|	2.9e-17	71.0	hypothetical protein BVRB_8g19...	[more]
gi\|870850984\|gb\|KMT03050.1\|	3.2e-16	71.0	hypothetical protein BVRB_8g19...	[more]
gi\|661893536\|emb\|CDP03345.1\|	1.5e-13	64.6	unnamed protein product [Coffe...	[more]
gi\|643724455\|gb\|KDP33656.1\|	2.6e-13	63.4	hypothetical protein JCGZ_0722...	[more]
gi\|223546779\|gb\|EEF48277.1\|	3.4e-13	62.5	conserved hypothetical protein...	[more]

BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BSV1_BETVU	2.0e-17	71.0	Uncharacterized protein OS=Bet...	[more]
A0A0J8BNW8_BETVU	2.3e-16	71.0	Uncharacterized protein OS=Bet...	[more]
A0A068U472_COFCA	1.1e-13	64.6	Uncharacterized protein OS=Cof...	[more]
A0A067KBQ4_JATCU	1.8e-13	63.4	Uncharacterized protein OS=Jat...	[more]
B9RKS9_RICCO	2.3e-13	62.5	Putative uncharacterized prote...	[more]

BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
AGP16_ARATH	6.1e-7	48.1	Arabinogalactan peptide 16 OS=...	[more]
AGP20_ARATH	1.4e-6	45.6	Arabinogalactan peptide 20 OS=...	[more]
AGP22_ARATH	8.9e-6	41.5	Arabinogalactan peptide 22 OS=...	[more]

BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G24105.1	1.4e-9	49.2	arabinogalactan protein 41	[more]
AT2G46330.1	3.5e-8	48.1	arabinogalactan protein 16	[more]
AT3G61640.1	7.7e-8	45.6	arabinogalactan protein 20	[more]
AT5G53250.1	5.0e-7	41.5	arabinogalactan protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009424	Arabinogalactan peptide, AGP	PFAM	PF06376	DUF1070	coord: 34..69 score: 1.3
None	No IPR available	PANTHER	PTHR33374	FAMILY NOT NAMED	coord: 3..69 score: 3.6
None	No IPR available	PANTHER	PTHR33374:SF7	SUBFAMILY NOT NAMED	coord: 3..69 score: 3.6