Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACGAAAAACGAAAATATCTTCAAGACCAAACAGGGGTTAAATTTTGGCCATACTCACAGTGTGATTGGCTAATTTGGCAAGGTAGAAGCTGTTTTTGTAGCCTCAGCTTCATTGCATTTTGGGATGTGCGTGTGAGGAGGACCGAGAGTCTGGCCGGAGATGCGGTCCATACCACTAGGCGGCGTCGGGATCACAATTACGCCGACCTCCAACGCCGCGTCTTGTAAATCTTCGCTGTTATCGTCGTCGTCTTTCGCCTTCAACAACAAAGTTCGACTGGGTTCTTCCTCCACCTGTGCCGCCCACTTCTCTGATGACCACTTTCTCACTTCGTCTTCCCCATCCGCCATTTTTCCAGGTACTAACTACTTTTTCTCTATGTAATATACTCCAATTTGTTCAATTTTTGGTTCAAATTTATGTTACTTTTTTTTAACTTCAATTGATCACTGTCTTATGATCTTGTAGCAATCGTACACCGCACTTATGGGTGTCAATTGAATTGATAGAAATTCTAGTCTCTGGAATTTCAAGCAGTATGTTTAATTTTAAATTGATGTTGCAAATGAGTGGATTAGTGATATGCTTAACTTATTTGGTCGTTATGTTTTCTAGGCTACGGATTAATAGGCGCCTTAATTATGTTATTTGAACCAGTAGTGTGACAACTAAATCTGGTTGGAGGGAGTATTACATTGCAAGAGTGTTGTCTCGTACAAGATCAACAGATTGTTTATGGGATTAATGAAGGTGATGGATAATTGGATAGGGTTCTTATTCTTTCATTGGTGGTTTAGGTTCATGAAGGGGCTTTTTGGGCTTTTTTTTTTCATGGAGGGAAAACTGGAAAAGGAATGTCCATTTCCGATGGAGCCAAATATTCATTTGTTCTTTTGGTTGTGGGATGTAATGAACTAAATCAAAATGGCTCTTAAAACCTCTTCGCTTCCTTTCCATGAAGTAGAACCTCTTCGCTTCCTTTCCATGAAGTAGAAGATGGTCGTCCCGTTATCACTTTTGGGTCAATTGGAAACAACCTCTCTGCAGTTGTAGGAGTTAGGTTGCGTACGGTCGACCCCCCTCACCATGCTTCTTGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGATGATGGAGGGAAAAGGAGTACAATTTAGGTTCATGGAGGAAAAGGGAGTACAATGTTGCAACAGTGTCGTCTCTTACAAGATTAAGTGATTAACAAATTCTTTATGGGAAAACCGGAGGAGATAAATAGAACTTTATTCTCCTGTAGGTGTTTTAGGTTCCTGACAGTCAATTCAGTTGCAGAATTGTAGAAGATGATGGGAAGCCTCATGGATAGCTGGTGATTTTATGTTTCTGGTTGTTTTCTCTAGAAATTGTTTTCAAATTGAAGGAAAGGTTGATATAATATGTTACATTATTCGGTCAGCAAATGAAATGAACTAAATCTGAGTAAGGTCATGTGGATACAAATTTTTATTTAAAGGTATAAATGTTGTATATCGAAATAAAAGTTAAGTCAAATGGTATAAAATTAACCATGATATAATGTAAAATTTATTTATTTATTTATTTATTTTGGCAAATAAATGAACTTTTATTAACCAAATGAACATTATAACTTATCATTTCAAAAGATACAAGAGAAACAAAGGATGAAAGAAAAACATCAGTATGAAGACTTGCCTACCGGGTTGGATTCCTCGCCCTTCATTTGCTGCTAAGGACCAAACAACCAAATCAAAAAGCCAACAGGCTAACAAACTTAAGCTAATAACATAGATCTTTGTTGATCCGTTGCTCTACACGCCGCCTTAAATTTGACTTCTTTAACAATTGCATCAGGACTCTTGCAACTGCTTCTAAAAATCTTCTGGTTCCTCTGAAGCCAGATATTGTAAACACACTCCCCAAAAAACATCACGTAAAGCTTGTATTTATCTCCAATCTTCTTGCCATATTTAACTGCAATGGCTAGCTCTTCTTAAACCAACAGCAGGCCTATGAATATGCAAGAGCTGCAGAACGTTGTTCCATATACTAGAAGAATACTGGCACTGAAAGAAAAGATGGGGAGCACTCTCAGGACAACTAAACTGCAAACGTTAGAATTTACCACATTCTATTCCAATAACCTGTCACGCGTAGGCAGCCTGTGACATATAGCTAGCCAACAAATAAAAATACTTTTATGTGTAGCTTTGTTGTTGCATAAGACTCTCCTCCACGAGACTTTAGCATGTGAACCAAGCAGGTGTTTATACAAAAGCTGAATAGCAAAGCAACCATTAAAGCATACCATATCCCAGCCTTCAATATCTTTGATCACCTCATAACAACTAAAGATCTTTCTCAATGCCCGCGACATTGTGTTTGAGATCGTAAACTGATCTAAGCTTATGCCCTTTAAATAAAAGCAGTTAGCCCATTTACACCAGCACATGTCCAAGTTAAAGCCGATAGCAAGTTAGTGACAATAGCTTTGTTCCACAACAATACATCTTTAATGTTCATACCTCCAGTACATCAGAAGAACAACTTTGACGAGCTGTACCTACCAGTGTAAGAAAGAACTTAAGTTATTATTTTTTGTTTTTTAAAGTTTTCCTTTAATAAAAAAATTTTTGCGGACTGTGCTGGCTGTTAATGGTGGATGGCAGCACTGGGGTGCTGGATCTGTGCTCATGTGGTGGCTGGTTCAATGGTCAAGTAATCGTCAGGTGGCTCGGTCAAGTGGGGTGGTCTAAGGTAGAGGAGAGAGGAAAAAGAAGGGAGAAGGGGGAGAGGAAAGTGAAGGTGGTGGCTGGTTGTGGATAGCTGGTGGTGGTGCATGCAGGTCCGGTGTGAGCTGTGGATGGTGGTCTGACAGTGGTTGGTGTTGCTGATTAGGTGCGGTGTGGCCCTGGTGAGGCTGCTCAAAGGGAAAGGAGACGAGGAGGAAGAGGAAGAGGGGAGAGAAAAAGGTAAAACTAATTTAAAGAGAGGGGAAACATGGTATTTAATATTGCGGTTGCTAGTAATTTCTTGTGGCATTTAACAAAACACTTAATTTTTCGTGGGAGGGGTATGGCAAGGGTTATATAATCTGTTAAAAAGGTCTTTGATGAAACTGTCCTCTGTAACATGTGGACATCTCGTGAGGTTATTTCTTATCTAATTTCTTGTCTTCTATACGAGCATTGCAGTATATGATGAAATTTGGAGATTGGATTATTTTGCTGGAGATGTGTTTTCACTTTTCAGTAGTCGTTGTAGACTTGTTAGTTGATGCATACAATAATATCCCTGTTTTGTTGTTTCGTAATTTCCTGCCTGAATACTACCAATGTTCACATAGTTGTGTATATGTTTACCTTGGCGGCTGTGGTCTCTATTCAAGGGGTTTGTCAAGCTAGTCAAGTTGCGGATTTGTTTCCATCTATATCACCTGAGGTAGTTGTTCGAGAAGCTAGATTGGATGATAGTTGGGAAGTGGTTGAAACACATTGTAGCTCCTTCTTTCCTGAGTATTCATTCCCTCTTGACTTTGTAATGAGGCTCGATAGGCTTATGGCAATGGTATTCGGATTTTCTGTTCCACATGGTTGCAAAAGGACTTGCTTGGTTGCTATTATTGGTAGCGCAGAAAATACCATCTACATTGAGAGTGACGATCTCAACTTTGGAGGTTTTGATACAAAATTCTCTCTAAATAGGGGTCATGTTGCTGGAATTTTAACTGTGGACACTGTTGCTGACTTCCTACCTAGAAAAGGACCTTTGAGGCAGCGAAGGTGCGTTCCATTTAACCTTTATTACGTTCTAGTTTTGGATACTTGACACAAGGATATAGATTTATTTATTTTTTGATATAGATTTTTTGCCCAATATTTTGAATTTTTTTCCAACCTCTACGACTATCTTATATCACTTATTTGAAATCCTTACGCACCTTAACTGGAGTTTGAAATTGAATGTGGTATTAGAGACATCTATGATATGAAGAGCGTGGTGATAATTTCCAAGAACACTGATACTGTGTTACCAACTTGATGACTTATTAAGATTTTCATAGTCCAACCAAAATGACGCGGTGTTAATTTTCGAGAACAGTAATCTTCTTGCCTGGGTTCTCCTGAAACAAAATTTGCTTTATTTGTTATCTATTTTTAAAAATGTTCTCTTTTGTTCTTATATACACCTGATAACTTGGACATGCACCCAAAAAGAAGGTCTTCTACCAACTAAGAATCCTATCATAAAAAAATAAAAAATAACATTTCTTCTTACTTTTAGGCTCTTATTGATAGCCTTAATAAGGATGAAGTTTGGTCTGAAGTGAAAGATAGTATGATTTCATGCACATTAATGGTTGTTTCTAGCCTTCAGATTATGAACTTAGTGCACAGATTTATAGGGTTCTATAATTGAATCCATCGAAACCCCTATTTTTAAATTATACTGGTAAAACATTAGCAGCAGTCTGATAATTTTAGTGCTGTGACAGGACGGGTATAGCATACATTTCAAATGTGGCAGTTAGACAGAAGTTTCGACGGTTGGGGATAGCTAAAAGGCTCGTGGCGAAAGCAGAGGCGCAAGCCTGGAGCTGGGGGTGCCGTACTGTTGCTCTCCATTGTGATTTGAACAACCCAGGGGCTACTAATTTGTATAAGAGTCAGGGTTTTAAATGTATCAAAGTGCCAGAGGGTGCGAATTGGCCCCAACCCAAGACTTCCCCAGATATCCAATTCAACTTCATGATGAAGCTTGTAAAACCTCCAACTACCTCATAAATTGTGCATACTCCACAGATTATATACTACAAGTAGATGCAACTTGTTGTAGATGCACATTCATCTGTAAATTCCATATTCATCTAGTAATTTAATGCGAACCAGCAGTTGTTGTAGGATCAAATCTAGAACATTACTGGTTTCATCTTCATTCGTTTGAACTTGTGCAATTTTCTTTACTTCAACATCAAGGAGGCCAAGTGGAACAACAAGCATTTTGAGATATTTTCTTATTCAAACATGGGCACATCTTGGTTTTATCAGGGAAGAAAAACTCAATTTTTCAATAGTATTAATAGATTGATAAGTAAATCCTTACCTTTCCCAATTTCCAGAAGTTAATCCTTATCAATATAGTCCTGATTGCGACTGCTTTACATGTTCTCAATTGTTTTGAGGTTCCCTTCCAATAATGGTCACGTGAGGTCTGACTCCATCGAGTGCGTCGAGGCGGATATCGGGCATGCAACAACAAACACATATCAACTAAAAGACAAACAGCTAAAAGACAAAAAAGGAAGTACCATTCATGTAAAAAAAGTACCATTCTAATACCATTCTGTAAAAAAAAGTACCATTTGTGTTTAGAAAAG GACGAAAAACGAAAATATCTTCAAGACCAAACAGGGGTTAAATTTTGGCCATACTCACAGTGTGATTGGCTAATTTGGCAAGGTAGAAGCTGTTTTTGTAGCCTCAGCTTCATTGCATTTTGGGATGTGCGTGTGAGGAGGACCGAGAGTCTGGCCGGAGATGCGGTCCATACCACTAGGCGGCGTCGGGATCACAATTACGCCGACCTCCAACGCCGCGTCTTGTAAATCTTCGCTGTTATCGTCGTCGTCTTTCGCCTTCAACAACAAAGTTCGACTGGGTTCTTCCTCCACCTGTGCCGCCCACTTCTCTGATGACCACTTTCTCACTTCGTCTTCCCCATCCGCCATTTTTCCAGGGGTTTGTCAAGCTAGTCAAGTTGCGGATTTGTTTCCATCTATATCACCTGAGGTAGTTGTTCGAGAAGCTAGATTGGATGATAGTTGGGAAGTGGTTGAAACACATTGTAGCTCCTTCTTTCCTGAGTATTCATTCCCTCTTGACTTTGTAATGAGGCTCGATAGGCTTATGGCAATGGTATTCGGATTTTCTGTTCCACATGGTTGCAAAAGGACTTGCTTGGTTGCTATTATTGGTAGCGCAGAAAATACCATCTACATTGAGAGTGACGATCTCAACTTTGGAGGTTTTGATACAAAATTCTCTCTAAATAGGGGTCATGTTGCTGGAATTTTAACTGTGGACACTGTTGCTGACTTCCTACCTAGAAAAGGACCTTTGAGGCAGCGAAGGACGGGTATAGCATACATTTCAAATGTGGCAGTTAGACAGAAGTTTCGACGGTTGGGGATAGCTAAAAGGCTCGTGGCGAAAGCAGAGGCGCAAGCCTGGAGCTGGGGGTGCCGTACTGTTGCTCTCCATTGTGATTTGAACAACCCAGGGGCTACTAATTTGTATAAGAGTCAGGGTTTTAAATGTATCAAAGTGCCAGAGGGTGCGAATTGGCCCCAACCCAAGACTTCCCCAGATATCCAATTCAACTTCATGATGAAGCTTGTAAAACCTCCAACTACCTCATAAATTGTGCATACTCCACAGATTATATACTACAAGTAGATGCAACTTGTTGTAGATGCACATTCATCTGTAAATTCCATATTCATCTAGTAATTTAATGCGAACCAGCAGTTGTTGTAGGATCAAATCTAGAACATTACTGGTTTCATCTTCATTCGTTTGAACTTGTGCAATTTTCTTTACTTCAACATCAAGGAGGCCAAGTGGAACAACAAGCATTTTGAGATATTTTCTTATTCAAACATGGGCACATCTTGGTTTTATCAGGGAAGAAAAACTCAATTTTTCAATAGTATTAATAGATTGATAAGTAAATCCTTACCTTTCCCAATTTCCAGAAGTTAATCCTTATCAATATAGTCCTGATTGCGACTGCTTTACATGTTCTCAATTGTTTTGAGGTTCCCTTCCAATAATGGTCACGTGAGGTCTGACTCCATCGAGTGCGTCGAGGCGGATATCGGGCATGCAACAACAAACACATATCAACTAAAAGACAAACAGCTAAAAGACAAAAAAGGAAGTACCATTCATGTAAAAAAAGTACCATTCTAATACCATTCTGTAAAAAAAAGTACCATTTGTGTTTAGAAAAG ATGCGGTCCATACCACTAGGCGGCGTCGGGATCACAATTACGCCGACCTCCAACGCCGCGTCTTGTAAATCTTCGCTGTTATCGTCGTCGTCTTTCGCCTTCAACAACAAAGTTCGACTGGGTTCTTCCTCCACCTGTGCCGCCCACTTCTCTGATGACCACTTTCTCACTTCGTCTTCCCCATCCGCCATTTTTCCAGGGGTTTGTCAAGCTAGTCAAGTTGCGGATTTGTTTCCATCTATATCACCTGAGGTAGTTGTTCGAGAAGCTAGATTGGATGATAGTTGGGAAGTGGTTGAAACACATTGTAGCTCCTTCTTTCCTGAGTATTCATTCCCTCTTGACTTTGTAATGAGGCTCGATAGGCTTATGGCAATGGTATTCGGATTTTCTGTTCCACATGGTTGCAAAAGGACTTGCTTGGTTGCTATTATTGGTAGCGCAGAAAATACCATCTACATTGAGAGTGACGATCTCAACTTTGGAGGTTTTGATACAAAATTCTCTCTAAATAGGGGTCATGTTGCTGGAATTTTAACTGTGGACACTGTTGCTGACTTCCTACCTAGAAAAGGACCTTTGAGGCAGCGAAGGACGGGTATAGCATACATTTCAAATGTGGCAGTTAGACAGAAGTTTCGACGGTTGGGGATAGCTAAAAGGCTCGTGGCGAAAGCAGAGGCGCAAGCCTGGAGCTGGGGGTGCCGTACTGTTGCTCTCCATTGTGATTTGAACAACCCAGGGGCTACTAATTTGTATAAGAGTCAGGGTTTTAAATGTATCAAAGTGCCAGAGGGTGCGAATTGGCCCCAACCCAAGACTTCCCCAGATATCCAATTCAACTTCATGATGAAGCTTGTAAAACCTCCAACTACCTCATAA MRSIPLGGVGITITPTSNAASCKSSLLSSSSFAFNNKVRLGSSSTCAAHFSDDHFLTSSSPSAIFPGVCQASQVADLFPSISPEVVVREARLDDSWEVVETHCSSFFPEYSFPLDFVMRLDRLMAMVFGFSVPHGCKRTCLVAIIGSAENTIYIESDDLNFGGFDTKFSLNRGHVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVRQKFRRLGIAKRLVAKAEAQAWSWGCRTVALHCDLNNPGATNLYKSQGFKCIKVPEGANWPQPKTSPDIQFNFMMKLVKPPTTS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo16839.1 vs. NCBI nr
Match: gi|902126572|gb|KNA04130.1| (hypothetical protein SOVF_202490 [Spinacia oleracea]) HSP 1 Score: 594.0 bits (1530), Expect = 1.500e-166 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Spo16839.1 vs. NCBI nr
Match: gi|731363943|ref|XP_010693705.1| (PREDICTED: uncharacterized protein LOC104906624 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 407.9 bits (1047), Expect = 1.500e-110 Identity = 204/289 (70.59%), Postives = 236/289 (81.66%), Query Frame = 1
BLAST of Spo16839.1 vs. NCBI nr
Match: gi|703129040|ref|XP_010104269.1| (hypothetical protein L484_001566 [Morus notabilis]) HSP 1 Score: 390.6 bits (1002), Expect = 2.500e-105 Identity = 196/286 (68.53%), Postives = 231/286 (80.77%), Query Frame = 1
BLAST of Spo16839.1 vs. NCBI nr
Match: gi|645255060|ref|XP_008233323.1| (PREDICTED: uncharacterized protein LOC103332367 [Prunus mume]) HSP 1 Score: 387.9 bits (995), Expect = 1.600e-104 Identity = 197/294 (67.01%), Postives = 236/294 (80.27%), Query Frame = 1
BLAST of Spo16839.1 vs. NCBI nr
Match: gi|590565077|ref|XP_007009847.1| (Acyl-CoA N-acyltransferases superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 386.7 bits (992), Expect = 3.500e-104 Identity = 198/294 (67.35%), Postives = 230/294 (78.23%), Query Frame = 1
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QA46_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_202490 PE=4 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 1.000e-166 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g067810 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.000e-110 Identity = 204/289 (70.59%), Postives = 236/289 (81.66%), Query Frame = 1
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Match: W9SEL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001566 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.700e-105 Identity = 196/286 (68.53%), Postives = 231/286 (80.77%), Query Frame = 1
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Match: A0A061FP75_THECC (Acyl-CoA N-acyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043153 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.500e-104 Identity = 198/294 (67.35%), Postives = 230/294 (78.23%), Query Frame = 1
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Match: M5X1Z5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009385mg PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 5.500e-104 Identity = 196/296 (66.22%), Postives = 236/296 (79.73%), Query Frame = 1
BLAST of Spo16839.1 vs. TAIR (Arabidopsis)
Match: AT2G39000.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 361.7 bits (927), Expect = 4.300e-100 Identity = 184/295 (62.37%), Postives = 215/295 (72.88%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16839.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16839.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16839.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo16839.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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