Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTTACAAAATTCGCAAAGAAGGTAACAATTTCTCAATTCCCGTAGGCACAAGTGCACAACTCGAAGTCTAAACCCCCACTTCGTGTATGCTATTCAGGCCACTAAACCCTTGAAAGTTGAAACCGAAGAAAGAGAGAAAGAAAGAGGAAGAGAAATGAACAGAGTTGCGTCATTTTTGCTGAAGAAAAACAAAGCTTTGAATTCCATCTTGTACAACAACGTCAAGGGATCATTAATTAATAGCAGTTGCAGAAATTCCTCTAATGAAGGCTTCAGATTCTTCTCTACATTAGGTTCTGCTGCTGCAATCACCGCCAGAAATGCACCTATTTCTGCCTTCAGATCATTTCCCAAGGTATTTTTCTAGCTCAATTTTTCTGGGTTCTTTCTGATTTTCCTGGAATTTGTCAATATTTCGATGTTGTTACTTGCTAGGATCATGGACCTTTTTTTTTGGGTTAAGGGTATTATTTTAGCTCTATTTTCTGGGTTCTATCTAATTTTACCGGAATTTGTTAATATCACCCTGACCTGCTTGGATCATGAAAAACACTTAGCTTTTATTAATCTGAAAAGGGTACATTTTAGATCAATTTTTGTTGTTTATTCTGTTTTTTTGCGTGCCCGAATTTATAATTTTGCCTGCCTTTATGATTGGAGTATGAAGTAGTATTCTTGTAAAATTATCATTTCCTATCTTACACTGATGAAAGTACTGTTCCGTTTTATATTGATTTTGGCATTAATTAGTAAATTAAGAGCTGAGCTAGATAGGGGAAATCCGACATTTTTCTTTATGCTTTGAGAAATGTATCAATTTGTGAGATTTGGCAAAGTAAATTGGATATAATTGGGGTACTAATTGTTAGGAAAACTCACACTATTTTGGAGTTTTCGGTGGCAGAAAAAGAATAACTTTTGCCTGTTGTGCATTGGATGTTAAATGTTGTAATGTCCTTGTTTTAATTCAGCTTCTGTTGCTATGTTCATGTGTAATAAGTCTTTGCTCCTTAATCATGCTACTGATTGTAAATTTAATAACAGGGTATCCATAGATACTCAATGAGGGGCATGTGCACAGCGCCTTCAATTCCCACTGGAAAATCAGGATTGAAACTATTAGTGACTGCTGGGCCACGTGCTCAGATGATGGTTGGGATATGGCTATTTGGTTCTGCAGCATGGGTGTTTAGCATGGTTATCCTTGGTGGAATAACTCGGCTTACTCGTTCTGGTCTTTCAATGACTGATTGGAAATTTACCGGGAACCTTCCTCCTATGACGGAGGATGAGTGGGCACTTGAATTTGAGAAATACAAGCAATCACCGGAGTACCAACGGTTAGTGCTCACTCCCTTTGAGTTCATTGTGGTACTACTATTAAGCAACTGTTGTGGCGTATGACAAGTGTTTTACGATGGTGGCATTCTTACTAGTAATTGCATGAAATCTGAAGTATATAAGCTTGTGTCTTGTTTAATTTGTCTAATGTTTGTTGTTTTTCTATGGGTTTTCATCCAGTATAAACAAGGGGATGAGTCTTGAAGATTTTATGTTCATTTATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCCCTTGGTATCATGTTTGCTTTGCCATTTTCTTATTTCCTACGTAAAGGGTTTATTACTGTACGCCTCGGTGTAAGGCTTTCAGCTCTTTTTGCGCTTGGGGCTGGGCAAGGGCTCATTGGCTGGTGGATGGTTAAAAGTGGTCTTGAGGTAATGCACTCAAACTTAATCGAGGACTACATCAATTCCATGCTTGCATAATAATGATTAGTCACATCTCAACCAATTATTTTTCCCTAACTTAGGAACCTGAATCTGAATATGCTGAGCCAAGGGTGAGTCCTTACCGGCTTGCAGCCCACCTTACTTCGGCTTTTGCTATATATTGTGGTCTTCTTTGGACTGCTCTTTCTGTAGTGATGCCTGAACCACCAGCCGAGTCATTAGCCTGGGTTAACGGTGCAGCAAAGCTTAAGAGACTTGCCATCCCTGTGAGTCTCCTTGTTGGTGTCACTGCAGTCTCAGGAGCATTTGTTGCTGGAAATGATGCTGTATGAAAGTTCTCTTTTCCTCTCTCATCTTCATTTATTTGGTTTCTCTGCTATTATCTGTGACAAAGAGTGACAAGGTATATTTCATTAGGGCCGTGCATATAATACCTTTCCTAAGATGGGAGATACTTGGATTCCAGATGATGTTTTGAGTATGAAGCCAATTATGCGAAATTTCTTTGAAAATACATCTACAGTGCAGGTACAAGTTATGCTTCCATTTTATACAACGGTCAACTCTGTAATTAGTGTAAAAATATATCCTGCCTGTATTATAAAACTATGTCATACTGGTGATTTCCAAAAGCGTTCCTGAAACCATGGTATCTTCCATTTGTAGAAGATTAGTTAATGTTTCCTTACGTGGTACTGCTTCTCTTTGTTATTACAAGCTCAGGGGCAAAGTGGCACTGAATAAGCTTATTGTGTTTGTAGTTGCTCTTCTTCTCTTGCCGAGTTGCATGGTTGCATCTCAAATTACCTTATTGGATCCTGGCGAATTGTGGTCTTCTAAAGTTTCTTTTTTGAATCTTCCAATCAGATCTGATCACCCCCACCCCAACCGCAACCACAAACAAAAGGAGAAATAAGAAATTCAAACAAACTCTAAATGTGCATAATGAACCAATTATTGGACGTTCTTATAGTCCTTTACAATTTATCATTGACAATAGGGAAGTTAAGATCAACCCATCACCATGAAATGGTGGAGTCCTCTAGTGCATCCCATCTCTACTACTTCTGTTTTATTGGGTAAGATAAGCTCATAGGCAGCATTACTGAATCCTTGTGGCTTGTGTGATTGTATTTGTAATATGCCATACTGGATAATTCAATTGCTATGACTGCAAGCCAACAGCTGGGAATGAAAAGCCTTAATAGGATCTCTCGGCACGGATGCCAGTATAATGGCCCTCGAATAGTTTTTGACCTGTAGAGTAGCGTACCTTAGTAGGAATGTCGTTGTAGTAACGAAAATGAGAAGTCTTGAAATTCGCTTGATTGTAGTCAAGTATTTGCTCAATAATTTATTCTACTAGTGTGTCGATTGGTTTTGACTTGGTATATGCACTTGCAGTCCCTTAAGATCTTGCTGTCCACAGTCAATTCCTATCTTTAGTTATATTCAAGCATGTATTGTGATTATGTGACTAGAATGATTAGATAATTTGAACTTTCTTGTAGTGAACATTCTAAAGTCATAATTAAAATGTTGAAGGATGTTTCGATGAAATAATTTGTATTACTATGTGATGCAGTTGGATCATCGTATCTTAGCCACTGCAACACTGGCATCAATCTGTGGTTTGTGGTGGGCTGCAAGGAAGCTGGATATCCATCCTGCTGTGAGATCTTTAATTGGCACTACTCTCGGAATGGCCGGTCTACAGGTGAATTTAAACTTTCTAGTGCTTGCATAATCAGCTATACCTGGAATAATTTATTATTGATTCAGCAAATTGTAGACATTTTATGTACAAATTAGATGGGCCCTGGTGCTTCTTACTTATCTCAAAAGCATAATTCTTTTTGCAGGTTACACTAGGGGTTTCAACTTTGTTGTCATACGTTCCAGTTTCGCTTGGCACAGCTCATCAGGCTGGAGCATTAACACTTTTAACCCTGATGGTCCTGCTTACTCATATTGTTCGCAAGCCATCTCTATCTCTTCTAAGAACACTGCCTTCAGTTGCAAAAACAACATGATTGCATCATCCCTCTTTTTCAGAAATTGTGAGTATTTAGTTAAACTTTCTTTAACATTCATTATTGAGAATGTTCATGTTCTCGCATAGTTTGGACTAGACTCTGGGACAAACAATATAATATGAAATCCTCAAGTTTCAGATGATAGTGTTCATCATAAATTGGAAACTTTGTACCAATTCATGTACAAAGATATGTAATACCAGATTATTAGTGTTTATCACTAAATTGAATTGAAGCAAAAATACACCCCCAGTCCCTATGGATCCTCCCGGCCAAGTGCACACTGTGTTCCTGTTTAAATATTTTCCCATTGCTTTCTGGACTGATGAATTGATGTTTCTAAATTTATGGAGCGGAAGTTGTATCGAATCCAAGGAACTCTCTTTAATAATGGTTGCTTTGAAATTTCTAACCTTCTTGTTGCC TGTTTTACAAAATTCGCAAAGAAGGTAACAATTTCTCAATTCCCGTAGGCACAAGTGCACAACTCGAAGTCTAAACCCCCACTTCGTGTATGCTATTCAGGCCACTAAACCCTTGAAAGTTGAAACCGAAGAAAGAGAGAAAGAAAGAGGAAGAGAAATGAACAGAGTTGCGTCATTTTTGCTGAAGAAAAACAAAGCTTTGAATTCCATCTTGTACAACAACGTCAAGGGATCATTAATTAATAGCAGTTGCAGAAATTCCTCTAATGAAGGCTTCAGATTCTTCTCTACATTAGGTTCTGCTGCTGCAATCACCGCCAGAAATGCACCTATTTCTGCCTTCAGATCATTTCCCAAGGGTATCCATAGATACTCAATGAGGGGCATGTGCACAGCGCCTTCAATTCCCACTGGAAAATCAGGATTGAAACTATTAGTGACTGCTGGGCCACGTGCTCAGATGATGGTTGGGATATGGCTATTTGGTTCTGCAGCATGGGTGTTTAGCATGGTTATCCTTGGTGGAATAACTCGGCTTACTCGTTCTGGTCTTTCAATGACTGATTGGAAATTTACCGGGAACCTTCCTCCTATGACGGAGGATGAGTGGGCACTTGAATTTGAGAAATACAAGCAATCACCGGAGTACCAACGTATAAACAAGGGGATGAGTCTTGAAGATTTTATGTTCATTTATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCCCTTGGTATCATGTTTGCTTTGCCATTTTCTTATTTCCTACGTAAAGGGTTTATTACTGTACGCCTCGGTGTAAGGCTTTCAGCTCTTTTTGCGCTTGGGGCTGGGCAAGGGCTCATTGGCTGGTGGATGGTTAAAAGTGGTCTTGAGGAACCTGAATCTGAATATGCTGAGCCAAGGGTGAGTCCTTACCGGCTTGCAGCCCACCTTACTTCGGCTTTTGCTATATATTGTGGTCTTCTTTGGACTGCTCTTTCTGTAGTGATGCCTGAACCACCAGCCGAGTCATTAGCCTGGGTTAACGGTGCAGCAAAGCTTAAGAGACTTGCCATCCCTGTGAGTCTCCTTGTTGGTGTCACTGCAGTCTCAGGAGCATTTGTTGCTGGAAATGATGCTGGCCGTGCATATAATACCTTTCCTAAGATGGGAGATACTTGGATTCCAGATGATGTTTTGAGTATGAAGCCAATTATGCGAAATTTCTTTGAAAATACATCTACAGTGCAGTTGGATCATCGTATCTTAGCCACTGCAACACTGGCATCAATCTGTGGTTTGTGGTGGGCTGCAAGGAAGCTGGATATCCATCCTGCTGTGAGATCTTTAATTGGCACTACTCTCGGAATGGCCGGTCTACAGGTTACACTAGGGGTTTCAACTTTGTTGTCATACGTTCCAGTTTCGCTTGGCACAGCTCATCAGGCTGGAGCATTAACACTTTTAACCCTGATGGTCCTGCTTACTCATATTGTTCGCAAGCCATCTCTATCTCTTCTAAGAACACTGCCTTCAGTTGCAAAAACAACATGATTGCATCATCCCTCTTTTTCAGAAATTGTGAGTATTTAGTTAAACTTTCTTTAACATTCATTATTGAGAATGTTCATGTTCTCGCATAGTTTGGACTAGACTCTGGGACAAACAATATAATATGAAATCCTCAAGTTTCAGATGATAGTGTTCATCATAAATTGGAAACTTTGTACCAATTCATGTACAAAGATATGTAATACCAGATTATTAGTGTTTATCACTAAATTGAATTGAAGCAAAAATACACCCCCAGTCCCTATGGATCCTCCCGGCCAAGTGCACACTGTGTTCCTGTTTAAATATTTTCCCATTGCTTTCTGGACTGATGAATTGATGTTTCTAAATTTATGGAGCGGAAGTTGTATCGAATCCAAGGAACTCTCTTTAATAATGGTTGCTTTGAAATTTCTAACCTTCTTGTTGCC ATGAACAGAGTTGCGTCATTTTTGCTGAAGAAAAACAAAGCTTTGAATTCCATCTTGTACAACAACGTCAAGGGATCATTAATTAATAGCAGTTGCAGAAATTCCTCTAATGAAGGCTTCAGATTCTTCTCTACATTAGGTTCTGCTGCTGCAATCACCGCCAGAAATGCACCTATTTCTGCCTTCAGATCATTTCCCAAGGGTATCCATAGATACTCAATGAGGGGCATGTGCACAGCGCCTTCAATTCCCACTGGAAAATCAGGATTGAAACTATTAGTGACTGCTGGGCCACGTGCTCAGATGATGGTTGGGATATGGCTATTTGGTTCTGCAGCATGGGTGTTTAGCATGGTTATCCTTGGTGGAATAACTCGGCTTACTCGTTCTGGTCTTTCAATGACTGATTGGAAATTTACCGGGAACCTTCCTCCTATGACGGAGGATGAGTGGGCACTTGAATTTGAGAAATACAAGCAATCACCGGAGTACCAACGTATAAACAAGGGGATGAGTCTTGAAGATTTTATGTTCATTTATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCCCTTGGTATCATGTTTGCTTTGCCATTTTCTTATTTCCTACGTAAAGGGTTTATTACTGTACGCCTCGGTGTAAGGCTTTCAGCTCTTTTTGCGCTTGGGGCTGGGCAAGGGCTCATTGGCTGGTGGATGGTTAAAAGTGGTCTTGAGGAACCTGAATCTGAATATGCTGAGCCAAGGGTGAGTCCTTACCGGCTTGCAGCCCACCTTACTTCGGCTTTTGCTATATATTGTGGTCTTCTTTGGACTGCTCTTTCTGTAGTGATGCCTGAACCACCAGCCGAGTCATTAGCCTGGGTTAACGGTGCAGCAAAGCTTAAGAGACTTGCCATCCCTGTGAGTCTCCTTGTTGGTGTCACTGCAGTCTCAGGAGCATTTGTTGCTGGAAATGATGCTGGCCGTGCATATAATACCTTTCCTAAGATGGGAGATACTTGGATTCCAGATGATGTTTTGAGTATGAAGCCAATTATGCGAAATTTCTTTGAAAATACATCTACAGTGCAGTTGGATCATCGTATCTTAGCCACTGCAACACTGGCATCAATCTGTGGTTTGTGGTGGGCTGCAAGGAAGCTGGATATCCATCCTGCTGTGAGATCTTTAATTGGCACTACTCTCGGAATGGCCGGTCTACAGGTTACACTAGGGGTTTCAACTTTGTTGTCATACGTTCCAGTTTCGCTTGGCACAGCTCATCAGGCTGGAGCATTAACACTTTTAACCCTGATGGTCCTGCTTACTCATATTGTTCGCAAGCCATCTCTATCTCTTCTAAGAACACTGCCTTCAGTTGCAAAAACAACATGA MNRVASFLLKKNKALNSILYNNVKGSLINSSCRNSSNEGFRFFSTLGSAAAITARNAPISAFRSFPKGIHRYSMRGMCTAPSIPTGKSGLKLLVTAGPRAQMMVGIWLFGSAAWVFSMVILGGITRLTRSGLSMTDWKFTGNLPPMTEDEWALEFEKYKQSPEYQRINKGMSLEDFMFIYWMEYAHRMWGRALGIMFALPFSYFLRKGFITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYAEPRVSPYRLAAHLTSAFAIYCGLLWTALSVVMPEPPAESLAWVNGAAKLKRLAIPVSLLVGVTAVSGAFVAGNDAGRAYNTFPKMGDTWIPDDVLSMKPIMRNFFENTSTVQLDHRILATATLASICGLWWAARKLDIHPAVRSLIGTTLGMAGLQVTLGVSTLLSYVPVSLGTAHQAGALTLLTLMVLLTHIVRKPSLSLLRTLPSVAKTT Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo17053.1 vs. NCBI nr
Match: gi|902221201|gb|KNA18821.1| (hypothetical protein SOVF_066870 [Spinacia oleracea]) HSP 1 Score: 901.4 bits (2328), Expect = 6.700e-259 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1
BLAST of Spo17053.1 vs. NCBI nr
Match: gi|731319954|ref|XP_010670545.1| (PREDICTED: cytochrome c oxidase assembly protein COX15 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 782.3 bits (2019), Expect = 4.500e-223 Identity = 395/460 (85.87%), Postives = 424/460 (92.17%), Query Frame = 1
BLAST of Spo17053.1 vs. NCBI nr
Match: gi|728833037|gb|KHG12480.1| (Cytochrome c oxidase assembly COX15 -like protein [Gossypium arboreum]) HSP 1 Score: 685.3 bits (1767), Expect = 7.600e-194 Identity = 346/457 (75.71%), Postives = 389/457 (85.12%), Query Frame = 1
BLAST of Spo17053.1 vs. NCBI nr
Match: gi|823259590|ref|XP_012462504.1| (PREDICTED: cytochrome c oxidase assembly protein COX15 [Gossypium raimondii]) HSP 1 Score: 683.3 bits (1762), Expect = 2.900e-193 Identity = 344/458 (75.11%), Postives = 390/458 (85.15%), Query Frame = 1
BLAST of Spo17053.1 vs. NCBI nr
Match: gi|590604890|ref|XP_007020356.1| (Cytochrome c oxidase 15 [Theobroma cacao]) HSP 1 Score: 682.2 bits (1759), Expect = 6.400e-193 Identity = 348/462 (75.32%), Postives = 392/462 (84.85%), Query Frame = 1
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH32_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066870 PE=3 SV=1) HSP 1 Score: 901.4 bits (2328), Expect = 4.700e-259 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTS0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042020 PE=3 SV=1) HSP 1 Score: 782.3 bits (2019), Expect = 3.200e-223 Identity = 395/460 (85.87%), Postives = 424/460 (92.17%), Query Frame = 1
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NI08_GOSAR (Cytochrome c oxidase assembly COX15-like protein OS=Gossypium arboreum GN=F383_19572 PE=3 SV=1) HSP 1 Score: 685.3 bits (1767), Expect = 5.300e-194 Identity = 346/457 (75.71%), Postives = 389/457 (85.12%), Query Frame = 1
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VFL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G149100 PE=3 SV=1) HSP 1 Score: 683.3 bits (1762), Expect = 2.000e-193 Identity = 344/458 (75.11%), Postives = 390/458 (85.15%), Query Frame = 1
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Match: A0A061F4B2_THECC (Cytochrome c oxidase 15 OS=Theobroma cacao GN=TCM_030537 PE=3 SV=1) HSP 1 Score: 682.2 bits (1759), Expect = 4.500e-193 Identity = 348/462 (75.32%), Postives = 392/462 (84.85%), Query Frame = 1
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Match: COX15_ARATH (Cytochrome c oxidase assembly protein COX15 OS=Arabidopsis thaliana GN=COX15 PE=2 SV=1) HSP 1 Score: 641.3 bits (1653), Expect = 7.800e-183 Identity = 324/454 (71.37%), Postives = 381/454 (83.92%), Query Frame = 1
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Match: COX15_MOUSE (Cytochrome c oxidase assembly protein COX15 homolog OS=Mus musculus GN=Cox15 PE=1 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.500e-85 Identity = 171/370 (46.22%), Postives = 241/370 (65.14%), Query Frame = 1
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Match: COX15_BOVIN (Cytochrome c oxidase assembly protein COX15 homolog OS=Bos taurus GN=COX15 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.300e-84 Identity = 168/378 (44.44%), Postives = 242/378 (64.02%), Query Frame = 1
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Match: COX15_HUMAN (Cytochrome c oxidase assembly protein COX15 homolog OS=Homo sapiens GN=COX15 PE=1 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 6.400e-84 Identity = 173/389 (44.47%), Postives = 247/389 (63.50%), Query Frame = 1
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Match: CTAA_NITMU (Heme A synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ctaA PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.400e-75 Identity = 154/345 (44.64%), Postives = 218/345 (63.19%), Query Frame = 1
BLAST of Spo17053.1 vs. TAIR (Arabidopsis)
Match: AT5G56090.1 (cytochrome c oxidase 15) HSP 1 Score: 641.3 bits (1653), Expect = 4.400e-184 Identity = 324/454 (71.37%), Postives = 381/454 (83.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17053.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17053.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17053.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17053.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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