Spo17080.1 (mRNA) | SpinachBase

Overview


Name	Spo17080.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Peptidase S24/S26A/S26B/S26C family protein
Location	chr1 : 8888130 .. 8899611 (-)
Sequence length	1486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTAGGCCTCCATCACCCTCGAAGTTTGGAATTGGAGGGTAAAAGTTCAGGCAAACCAAATAAGAAAAAAAAAAGGAAAAAGAAAAAGGAAATGTAAGCTTCTTCTCTATTTCACCATAATTAAAAGTAGTTGAAGAAGTTCCTCGTGAAGTAGTTTAATCTCAGACACTCAAAAAAAATCATCTAGCAATGGTTTCTGTATACACTTGGTGCCGCTACATCGCCCACAAACTTGAATACTCCATGGCTGTCAGCTGGAAGGTGCCTCTTCTTTCCATTACTTTCATCCAATTTCAGTCTTGCATTATGAATTTTTCGTGTTTTTTGTGATTTGATTGTGTAATATGTGAGTAATTAGTTAATGGGGGTGAATTCATTTTCGGTGGGTTTTGCTAATTAGTTCTTGTTGGTGAATTGAACTTTGGGTTTGAATCTGAAATGATTAGTTTCTTTAATTGGGTGTGCTTTTCTTTGGGTTATTTCGAAATTCTTGCTAATTTATCGACGGGTTTTGGGTTGATTTTTTTAGGGTTTAAGGTTTAGGGTTTATCATTTCTTTGTTTTGAGGTTAACGGTGCGATCTTTTGGCATTACTCTCTTTGTATTAGTTGAATCGGCATGTAAAATTGTCCAGGCAGCAATTCTTCCTGAATAATGAAGTATGACAATGATTTCATTATGACAAGTAATTAAGGGGGTAAAGAATGAAAGTGAAGTTGTCTTGATGTTTCCCAATGAAATAAATTGCGAAATTCAGTACTAGGAGAGTAGGAGTTGCTTTGGCTTAATGAACAGTCTGCAGGATCATTCTGATTGTGTACATTTAATCTGCTTTTGGACAATTTGGTTTGTATCATTGTATGTGCATTACACTTTTTCGTAATTACATCAGTTCAACCTGCGTGTGTATGTGTGTGCGCGTGTTCTTGGGGAAGGGGAACTGGGATTTTGTACCATTTTACTGTTTATCTTTTGGGGTGCAAATTTGCAATGATGTTTTGATAATTAGGACAGTGGATCATTAGTTGGCACAATTGTTTCCATGTTGTGTCTCAGAAAATAAGATGACGATTTACAAGGGGATATAAAAACTATCTTTTGTCCATAACAAGTTGTATTTACCTAATTCACTAATTTTGAGATTGGGCACGGGTTCACATTTCGCTACCTAAAATGCATCAGTTTCATGTTACAATTCACCTTTCTGGGTTGGCAGAGGATTAGGGAATTAGGTAATTCTAATTACAACATTTTAAGTTGGGCTGCATCATCTTTTCAAGAAGAAGTTTCTATATCTTTATGAATAATATGAAATCTAGGCTGATGGTTTGTGGTTGTATCATGCTTCTACTTATTTGGCACATTCCTTTTTAGCAAGGTTTTGTTTACATGAAAACAGCCTCCTACTGTATGCTACTGACCTACAGTTTGTTCAGGGATTAACTTGTATACATCTTGACCTTTTAATGTGCCAACTCTAGTGAACAGGAGTCAGAAGGATTCCTGTTGGGTTTTCATTGTCGTGGAGATTCTTTGCCTTTTGTAAAAACTGCAATTTTCATGTTATACAATCTTTTTCATTTACCATTTATGTGTCGATGTTATCAGTCTCCTAGGGCGCATCTTTTCTGATTGGGATGTTTAATGTGTTTTGAAGCACTATAAAGGGGGACGGATAACTGAAGGTCAAATTGGAGACACTGTCTGGAAAAACCTATTTCAGGGCAAAGTAACCTTTTTACATTGGAATAAAGGACAAGAGATGGCTCCTACGATTGGGTCCGAAGGTGGAACTCTCTTAGTTAGAAAAATACCAGTTCCAGGCCCAAGGTAATTCAGGATTGCCTATTTTTATTGTTCTTCATTCTATCTAGTGTTCATCAATTTCACACCTTTGTTCNACAGTCTGCAGGATCATTCTGATTGTGTACATTTAATCTGCTTTTGGACAATTTGGTTTGTATCATTGTATGTGCATTACACTTTTTCGTAATTACATCAGTTCAACCTGCGTGTGTATGTGTGCGCGCGTGTTCTTGGGGAAGGGGAACTGGGATTTTGTACCATTTTACTGTTTATCTTTTGGGGTGCAAATGTGCAATGATGTTTTGATAATTAGGACAGTGGATCATTAGTTGGCACAGTTGTTTCCATGTGGTGTCTCAGAAAATAAAATGACGATTTACAAGGGGATATAAAAACTATCTTTTGTCCATAACAAGTTGTATTTACCTAATTCACTATTTTTGAGATTGGGTACGGGTTCACATTTCACTACCTAAAATGCAACAGTTTCATGTTACAATTCACCTTTCTGGGTTGGTAGCGGATTAGGGAATCAGGTAACGCTAATTACAACTTTTTAAGTTGGGCTGCATCATCTTTTCAAGAAGAAGTTTCTATATCTTTATGAATATATGAAATCTAGGCTGATGGTTTCTGGTTGGTATAATGCTTCTACTTATCTGACACATTCCTTTTTAGCAAGGCTTTGTGCAAATGAAAACAGCCTCCTTCTGTCTGCTATAGACCTACAGTTTGTTCAGGGATTAACTTGTATACATCTTGACCTTCTAATGTGCCGAGTCTAGTGAACAGGAGTTGTCGTGGATTCTTTGCCTTTCGTAAAAACTGCACTTTCATGTTATACAATCTTTTTCATTTACCATTTACGTGTTGATGTTATCAGTCTCCTAGGGTGCATCTTTTCTGATTGGGATGTTTAATGTGTTTTGAAGCACTATAAAGGGGGCCGGATAACTGAAGGTCAAATCGGAGACACTGTCTGGAAAAACCTATTTCAGGGCAAAGTAACCTTTTTACATTGGAATAAAGGACAGGAGATGGCTCCTACAATTGGGTCCGAAGGTGGAACTCTCTTAGTTAGAAAAATACCAGTTCCAGGCCCAAGGTAATTCAGGATTGCCTATTTTTATTGTTCTTCATTCTATTGGAGTGCTCATCAATTTCATACATTTGTTCTTCATTCTATCGGATTGGCATTGTTGAGTTCCTACTTGAACGTGGGATNGGGGGGGGGGGGGGGGGGGGATGACAGTGTTCTTTTGCTTTACATTTTTTTAGAAGGCCTGGTTAATTATTGGCTGTCATTGTATACATATTGTAATTTTGATGTTAGCTGGAGGTGAAACTGGGTGAAGATAGTCTTGCATCCTATGAAATGGTGATTTTTATTAATTTCTCCATCCTTTTTGACTTTATACTTCTAAGTGAGCCATGGACAGTAAGAAGAAATGTCAAGAATGGAATGAAAATTTGATGGTATATATATAGAGACAAAAGTAGTACAGTAAGAGATAGTGTTGTAATTGTATCGTTTGTATGTGAATAAAGGGTTGATGTGATGGAGAGAGAAAGTAAGTTTAACTTAAAAAGAAATAGGAAGCTACTTTTAGGGACATCCCGATAAGGAAAGTGGGAAGTTAGATATGAGACTGTGGGAGCGTTAAATAATTAAAGTTCTAGTATATATTGTTTGTAAATATTCACCTAAGATATTATGTCCTATACTACTGTGCATTAAGGTAATGTGCCGATTTTGCTGAAGCGGAAAGATAAAAACGCTGCACTGGTCATTAACCTTGATTCGGTGCAACTATATCCTTATTTTTTTTATGATGATTTCTTTGTGGTGTTGAAGTTTGTTGTTATTTCTAATTGGTTGGGTTTAACCTGGTATGTAAAGTGGGCTGAAGGAAAACTGTATTGCAGAAATTTGGAATTTATAGGTCTATGTGGCTTTTGATGGTTTAAATGGAAAGGAAATAGTGGGTGCAATGTTTTGGACAAAGCCTTGTCAGTTGTTGTGTGTCTCTTTAAGCTCTCAGTTTCAGGTTATAGACTTATAGTTAAAGCCAAGATATCTGTCATGAACAGCAATTGTCACTCATTGATAACGTAGTCTTAGGGTATAGAACTATAGATAGCTTTATGTGTGATGTAAATTACTAGTGTTTTTGTCCATGGCTCTCTTGTAAGGGTTATCCGGTTGTGTGATAGTCTCTGAATCCTGAAGGCATGGTTTATTTTGTCCCCTGAACTTCCCTTAAATAAGTTAAGGTTGATTTCTCTTGGTATTAATTTGATACTTCTATTACTCTGTATGACTTAACCCCCTTCTTCCAGAAAAGAGAGCGCATACACAAACACACACGCCACACAAACTCACATGTATATGTCCTTGGGATTTTGGGATGGAATGGTTTGGTAACTGATTATCTTGAATAAAAGCCATAATCATGTTGGTTGAGATAAATCTGGGATTTGGACTTTTCTGCTTCAGCTCTTATGGTGCTGGTTTAGGTCAACATGTTAGAAGATGGTTTCTACCATTTCTCCGAAATCTGTACCTAGTTTTGCAGAAACTTTTTGTGCGGTCAATTCGTTACTCCCTCTATGAATGCATTTTATTTTGGACTGTAGTTTATTACTGTCTACTCTAGCAACTGTTTTGTTACTTGAGTTAGTTGATTGAGTGACCCGTTCTCAAGAAACTGAATGATGAATCACAAATGGTTGGTTTCTCTCTTCGCTTGAGAGTTACTAGTTCGCTATTCTCTTCACGTGAAGTTATTGCATTATCCTGCATCTATGTCAATTGGACACGGTAACACGAGTATGCCTGTCAGATATGACTCCTATGGGTATATATTTGATTGTCCAACTCACCATGGATAAAAACTCAAGAGGACACTGTTAAAAATTTGGACGCATGCGGGGATAAGGAATTCTGTATTATGTATTATAGTATCGAGAATAATTTAAAATAAATAAGTGAGATTGATTATATTAGGAAGTAAAAGGTGTAAAGCCAATTACTTGTCTTATAAGCAGACATTACCCACATAACCTTATCTAGCCCAAAACCATATATTCCTAAATTTGAGCTACCTGAAATAAGTTTGATCTAGTAAATCGACCTCTCCAATGTTCTCTTCTCTGCCCCCTCTCCCGTCTTATGGTTTATGGGGACATGAATTGTTCGATCGCAAGGTCAAGTATTGGGTACAGATTCTTTCATGCATCCTTAAATGTGTCTTGCCATCACAGGTGTGGCAGCAAGAAGTACTTTATTATGTATCTCTTGCAAAAGCCTAATTTAAGCAAAGATGTTTGTGCGCGACTGTATCTTTGCAGAAATTTTGTCAGCATGTAAGCAGATGTGTCCTTTTGATTTTTTGTTAGTTCTTTTAATATTTACATGCCTGTATCCCTAGTTTGGTTATACTTTACAATTCAATTGTGTCAAAGATATGGAATGTGCTGTCTGGCATCCATGGCCTGAGCTGAGCTACTGTGTTGCTGCATAATTTTCTTGTTAAATTCCCTTTTTGTCTGGGAAGGAAAGGGAGAACAGATAATTCTAGATTTGTTTGCAAATATTGCTTTCTATTTCAGATTCTTAAATGTGTATATTACCATGGCAGTCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCGAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAACTTTGAAGCCAAAGGTATTGACATTTGCCATTTCTTCATAACAAAATTTGTTGCTGTGCTCAAATACTTGCATTAGCTTTTAGCAGAACAGAGTTTGAACTTTTTACGCGTACTATCTAATTGTTTCAAAATTCACACAGATAGCCAACTATCATTTGGTTAAATATATAATTTTAACGCCATTTGTAACACGAAATTTGACAGATTATTCCAGTAATCATTGCACAATTTCTTTGCTTCCTGTTGCTTGTTCGTTCTGAGTTTCTCCTTTCAATGGACTCCCTTCTGATAGACTATGAAATAGTCAACGTAAATATTAGCATAATCTTTTCATAGTCTATCACCTTCGTCCCATATTATACTTCACTCTTTTTTTTTTGGCTCGGAGAGTAAGAATAGTGGTCATAGGGAGGGAGAGAGTTAGAAGAGAGGGGGTGGGGGGTATTGAGAGAAAAAGCAAGGTAAAGTTTATTTCAATGACAAGTATGCAATTAATTTCTGACAGTTAGTAAAGGATATTTTCCAATAATTAGAGTACGTAGGAAACAATAATGATGTGGAAGCTTCTCTTGGCCTTGTGGAAGTCAGGAGGGGCATGAACTGAAGAGAGTAGAGAGTCTGGTGGTGCCTGCACTTCGTTATTGGAAGGCTTCTCTATATTTTTTTATTTTTTATTATCATCCTTAATATTACCGTCTAATAAGATGGCTTTGGGCCAGGTCGAGCTTCGGGCTGAGCCCACAGGCCGTTTCCTGAACGGGATGCCCCACGCCAAGCCCACTTTACATCGGGCCGGGCGGTCAAAATTTGAAAAACAGGACCCCAGGCCCGTGGGTCACAGGGTCGGGTCGTCTTTACTAAATTTGACGTGCTTTGTCATTACGTGCCTTGTCGTGCTTTTTCCAAAAAAATGTGCCGATGGCCACAACTTTGTGTTCATGCAGGGCCTTGCTTTTTTCATGCCGGTGCTGGGTCGGGCTTTTTCGTGCCTGGTCGGGTCATGTCTCGGCCCAGCCCAACCCACAGCCATCTTTACCGTATATGTTTACTTTTACTGCACCTTTGATCTATTTACCATATCTTCAGATGGTAAGCAGATTTTTGACGTTATATGATCCACTTTCTCCCATCCCAACCCCCTGAAGCAGGAAGCCAAGGACAGTCGAGCTTTTGGTCCAGTTAATATGTCAGACATTATTGGTAGAGTTATATATTGTTTGCGCAATGCTGTTGATCATGGTCCTGTGCAGAACAGGTAAGTGCATCAATTTGCTTCATCGTGTCTTTCTTTAGGCTTTGTTGGTGTAAAACGTTTTCATGGAAAACGATTTCCCCCTTTTCAATCATTTTACACGGTTTGGTTTGGCAAGGAATGGGAAAACAATTTTCCATAACTCCAGGAAACCACCTTTCCATCTTTCCTCCTTACCTCCCTCTCCCTTTTCCCCCTCAATCTTCACCCATTTTCTTTTTTCTATTAATTTTCTTTTAACTAACCAAACAAAAGGAAAACTAGTTTGGAATCGTGTTTTCCCTTGGAAAATCATGTTTCACTGAAACGTTTTACACCACACCCAAACGGAGCCTTATTGTAAAATTACGCAACTACAACTACCTTGACAACTAACTTAGTGATCTTCCTGTTAAAATCTTTTCTCTGCAGTGATTTCAGCATCAAGAAGGACTCGCCAGTGTTAGAAGTTGAGCTCGATGTTGATGAGATGGCTAAGAATCACAAAACTTGAATTGAAATCAGCTAATGATGCGTCAGAGCTCGTTGTTGGACTGGGTTATGCATAATCCACCCGCCAACNGGGGGAGGCAAAACACAAACTCTTTCGATGTGTAGCCCGGGATCTTGTAAGAGACCGTAACAGTCTCTCTTTCGTAATTAGGTTCTTCCCCGATTATCAGCCTATCCTATCGCCAGTCAGGAATTTGGGATGGAATGGTTTGGTAACTGATTATCTTGAATAAGAAGCCATAATGATGTTGGTTGAGATAAATCTGGGATTTGGACTTTTCTGCTTCAGCTCTTATGGCGCTGGTTTAGGTCAAGAAAACCTTTTCAGTCTTTAGCTTAGACATGTTCGAAGATGGTTTCTACTGTTTCTCCGCAATCCGCACCTAGTTTTGCTGAAATTTTTTGTGCGGTCAATTCGTTGCTCCCTCTGGGAAATGCTTTTTATTTCAAAGTGTAGTTTAGTTCTGTCTACTCTAGCAACTGTTTTGTTACCTGACTTAGTTGATTGAGTGATCCATTCTCAAGAAACTGGATGATGAATCACAAATGGTTTGTGCCTCTCTTCGCTTGAGAGTTACTAGTTTACTATTCTCTTCACGTGAAGTTATTGCATTATCCTACATTTATGTCAATTGGACACGGTCACACGAGTACGGCTGTCAGATATGACTCCTATGGGTATACATTTGATTGTCCAACTCAACATGGCTAAAAACTCAAGAGGACACTGTTATAAATTTGAACACGTGTGGGGATAAGGAATTCTGTATTCTGTGTTATAGTATCAAGAATAATTTTAAATAAATGAGGTTGATTATATTAAGAAGTATAAGGTGTAGAGCCAATTACTTGTCTAATAAGCAGATATTACCCTCATAACCTTATCTAGCCCAAAACCATGTATTCCAAAATCTGAGCTGTCTGAAAGAAGTTTGATCTGTGTAAGTAAATCGACCTATCCAATGCTCTCTTCTCTGCCCCCTCTTCCGTCTTATGGTTTATGAGGACATGAATTGTTTGATCGCAAGGTCAAGTATTGGGTACGGATTCTTTCATGTATCCTTAAATGTGTCTTGCCATCACAGGTGTGGCAGCAAGAAGTATTTTTATGTATCTCTTGCAAAAGCCTAATTTAAGCAAAGATGTTTGTGTGTGACTGTATCTTTGCATAGATTTTGTCAGCCTGGAAGTATTTTTTTTTATGTATCTCTTGCAAAAGCCTAATTTAAGCAAAGATGTTTGTGTGTGACTGTATCTTTGCATGAATTCTGTCAGCCTGTAAGCAGATGTGTCCTTTCAATTTTTTGTTAGTTCTTAAAATGTTTAAATTCCTTTTGCCCTAGTTTGATTATACTTCGCATATATTTGTCATGGTAGGTAGAAGTGGATGCACTATCTTCTTTCCCCCTTTTTTAGTTCTTATCATGGAAAGATATGTAATGTACTGTGTTGCTGCATAATTTTCTTGTTATATTTCCGTTTTGTCTGGCAAGGAAAAGGAGAACAGATAACTCTACATTTCTTTGCAAATGTTGCTTTCTATTTCAAATTCTTAAATGTGTGTATATTACCATGGCAGTCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCAAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAGCTTTGAAGCCAAAGGTACTGTCATTTGCCATTTCTTCATAACAAAATTTGTTGCTTTGCTCAAATACTTGCATTAGCTTTTAGCAGAACTGAGTTCGAACTTTTTACGCGTACTATCTAACTGTTTCAAAATTCACACAGATAGCCAACTATCATTTGGTTAAATACACAATTGTAAGTTTGTAACGCCATTTGAAACACAAAATTTGACAGATTATTCCAGTAATCATTGCACAATTTGTTTACTGCCTGTGCTTGTTCGTCCTGAGTTTCTCCTTTCAATGGACTCCCTTCTTCCCATATTATAATTCAGACTTTTTTTTTTGGCACGGAGGGTAAGAATAGGGGTCAGAGAAAGAGAGAGAGAGAGAGTAAGAAGAGAGGGGGTGGGGGGTAGTGAATACAGTCTCTAATTACGAAAGGCAAGGTAAAGTTTATTCAAAGACAAGTGTGCAATTAATTTCTGACAGTTAGTATAGGATATTGTCCAATAATTAGAGTATGTAGGAAACGAATAATGATGTGGAAGCTTTCTCTTGGCCTTGTGGAAGTCAGGAGGGGCTTGAACCGGAGAGACTAGAGATTCTGGTGGTGCCTGCACTTCATTATTGGAAGGCTTCTCTATTTTTTTTATTATCATCCTTAATATTACCGTCTAGGGTCGGGCTTCGTGCTGAGCCCACAGGCCGTTGCCTGAACGGGACGCCCCACGCCAAGCCCCACTCTACATCGGGCCGGGCGGGTCAAATTTTTTAAAACAGGACCGAAGCCCGTGGGTCACCGTGCCGGACCTGGTCGGGCGGTCGTGCCAAAGCCTAATTTTACTAAAATTTGGCGTGCTTTGTCATTCCGTGCCTTGTCGTGCCTTTTCGAAAAAAACGCGCCATGGCCCACGACTTCATGCTCGTGCAGGACCGTGCTTACTTTTTTCATGCCGGTGCTGGGTCGGCCATTTTCGTGCGTATATGTTTACTTTTACTGCACGTTTGATCCATTTACCATATCTTCAGATGCTAAGCAGATTTCTGACGTTATATGATCCACTTTCTCCCACCCCATCCCAACCCCCTGAAGCAGGAAGCCAAGGACAGTCGAGCTTTTGGTCCAGTTAATATGTCAGACATTATTGGTAGAGTTATATATTGTTTGCGCAATGCTGTTGATCATGGTCCTGTGCAGAACAGGTAAGTAGTCTAAGCACATCAATTTGCTTCATTGTGTTTTGTTTAGGCTCCATTTGGTAGGGTGTAAAACGTTTCGTTTCCCCCTTTTGAATCATTCTACATTGTTTGGTTTGGCAATAAATCAATTTTCCATAACTTGCTCAAAGGTGGAAAAACCTTTTCCATTTGAAAGGGAGGGTAATCACTTTTCCATCTTCCCTCCTTACCTCCCTCTCCCCTTTTCCCCTCAATCTTCACCCATTTTCTTTTCTCTATTAATTTTCTTTCAAGTAACCAAACAAAGGAAACTAGTTTGGAGTTGTGTTTTCCCTTTTTTCACTGAAAACGTTTTACACCACACCAAACAGAGCCTTATTGTAAAATTACGCAACTACAACTACCTTGACAACTAACTTAGTGATCTTACTGTTAAAATCTTTTCTCTGCAGTAATTTCAGCATCAAGAAGGACTCACCAGTGTTAGAAGTTGAGCTCGATGTTGATGAGATGGCTAAGAATCACAAAACTTGAATTGAAATCAGCTAATGATGCGTCAGAGCTCGTTGTTGGACTGGGTTATGCATAATCCACCCGCCAACCCACCCGCCTGATCATTCACGTGACCCGTAAAATTAGAGCCTTTACTGAATTGGTTTATATGTTCCCTTCGTAACGGTCATTTCTTTGTGGCGAAAATTTATTCATTTGTCAAAATTTTAGTAAAGGAGAGAAGAAACTAAAATAATGAAGAGATGATGCAGAGTTGCTGATGAGTTTGGCACAGTTGGTTATGGTACACCTGCTGTTTTCTTCTTGAAAAATTTGAGAATGCCAGTATCAGATTTTGGATCTAAGCTGTAATCTTTATAATAATGTTTTGAAAATTTAAACACAGGGATTATCCATTCAATTTTCTGAGCTGTCATTTGCTTGTTCAAACTATATCAATATTTGTACTATATAGTTGAAGATTCTTATGTGCACTGAGCATCTAAGGGTATCTTATTGGCTTATTGCCGATTAGCGTTCTAGGTAAGTTCAACTATGTAGTAAATTCACGTGGGAAGTTTCACTTACCTATGTGGACCTAGGTAAGCAATTTCCTTTACTTTGTGAGAACTAAGATGTAAAACTTCATATGTTTTAATACTGCAATTCTCCACTTCTTAGGCAGTCATACTTCCCAAGTTCACATGATTATCCAAAAC

mRNA sequence

ATCTTAGGCCTCCATCACCCTCGAAGTTTGGAATTGGAGGGTAAAAGTTCAGGCAAACCAAATAAGAAAAAAAAAAGGAAAAAGAAAAAGGAAATGTAAGCTTCTTCTCTATTTCACCATAATTAAAAGTAGTTGAAGAAGTTCCTCGTGAAGTAGTTTAATCTCAGACACTCAAAAAAAATCATCTAGCAATGGTTTCTGTATACACTTGGTGCCGCTACATCGCCCACAAACTTGAATACTCCATGGCTGTCAGCTGGAAGCTGGAGGTGAAACTGGGTGAAGATAGTCTTGCATCCTATGAAATGATTCTTAAATGTGTATATTACCATGGCAGTCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCGAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAACTTTGAAGCCAAAGATTTTGTCAGCCTGGAATCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCAAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAGCTTTGAAGCCAAAGGTACTTAATTTCAGCATCAAGAAGGACTCACCAGTGTTAGAAGTTGAGCTCGATGTTGATGAGATGGCTAAGAATCACAAAACTTGAATTGAAATCAGCTAATGATGCGTCAGAGCTCGTTGTTGGACTGGGTTATGCATAATCCACCCGCCAACCCACCCGCCTGATCATTCACGTGACCCGTAAAATTAGAGCCTTTACTGAATTGGTTTATATGTTCCCTTCGTAACGGTCATTTCTTTGTGGCGAAAATTTATTCATTTGTCAAAATTTTAGTAAAGGAGAGAAGAAACTAAAATAATGAAGAGATGATGCAGAGTTGCTGATGAGTTTGGCACAGTTGGTTATGGTACACCTGCTGTTTTCTTCTTGAAAAATTTGAGAATGCCAGTATCAGATTTTGGATCTAAGCTGTAATCTTTATAATAATGTTTTGAAAATTTAAACACAGGGATTATCCATTCAATTTTCTGAGCTGTCATTTGCTTGTTCAAACTATATCAATATTTGTACTATATAGTTGAAGATTCTTATGTGCACTGAGCATCTAAGGGTATCTTATTGGCTTATTGCCGATTAGCGTTCTAGGTAAGTTCAACTATGTAGTAAATTCACGTGGGAAGTTTCACTTACCTATGTGGACCTAGGTAAGCAATTTCCTTTACTTTGTGAGAACTAAGATGTAAAACTTCATATGTTTTAATACTGCAATTCTCCACTTCTTAGGCAGTCATACTTCCCAAGTTCACATGATTATCCAAAAC

Coding sequence (CDS)

ATGGTTTCTGTATACACTTGGTGCCGCTACATCGCCCACAAACTTGAATACTCCATGGCTGTCAGCTGGAAGCTGGAGGTGAAACTGGGTGAAGATAGTCTTGCATCCTATGAAATGATTCTTAAATGTGTATATTACCATGGCAGTCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCGAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAACTTTGAAGCCAAAGATTTTGTCAGCCTGGAATCGTGTTTTCATTGGAGATATAGTGGTCTTGAAAGACCCTGAAAGCCCAAATGACTATCTAGTCAGAAGACTTGCTGCCACGGAAGGATATGAAATGGTCTCGAAGGATGAAAAAGAGGAGCCTTTTATTCTAGACAAGAACGAATGCTGGGTTCTTGCTGACAATGAAGCTTTGAAGCCAAAGGTACTTAATTTCAGCATCAAGAAGGACTCACCAGTGTTAGAAGTTGAGCTCGATGTTGATGAGATGGCTAAGAATCACAAAACTTGA

Protein sequence

MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVFIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVLNFSIKKDSPVLEVELDVDEMAKNHKT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17080	Spo17080	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17080.1	Spo17080.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17080.1.utr5p.1	Spo17080.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17080.1.CDS.6	Spo17080.1.CDS.6	CDS
Spo17080.1.CDS.5	Spo17080.1.CDS.5	CDS
Spo17080.1.CDS.4	Spo17080.1.CDS.4	CDS
Spo17080.1.CDS.3	Spo17080.1.CDS.3	CDS
Spo17080.1.CDS.2	Spo17080.1.CDS.2	CDS
Spo17080.1.CDS.1	Spo17080.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17080.1.utr3p.1	Spo17080.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17080.1.exon.6	Spo17080.1.exon.6	exon
Spo17080.1.exon.5	Spo17080.1.exon.5	exon
Spo17080.1.exon.4	Spo17080.1.exon.4	exon
Spo17080.1.exon.3	Spo17080.1.exon.3	exon
Spo17080.1.exon.2	Spo17080.1.exon.2	exon
Spo17080.1.exon.1	Spo17080.1.exon.1	exon

Homology

[Close]

BLAST of Spo17080.1 vs. NCBI nr
Match: gi|902179297|gb|KNA09325.1| (hypothetical protein SOVF_154700 isoform B [Spinacia oleracea])

HSP 1 Score: 194.1 bits (492), Expect = 2.400e-46
Identity = 125/241 (51.87%), Postives = 134/241 (55.60%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDI--VV 60
           MVSVYTWCRYIAHKLEYSMAVSWK                    +Y G R+  G I   V
Sbjct: 1   MVSVYTWCRYIAHKLEYSMAVSWK--------------------HYKGGRITEGQIGDTV 60

Query: 61  LKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRV 120
            K+        V  L   +G EM      E   +L             ++   +   +RV
Sbjct: 61  WKNLFQGK---VTFLHWNKGQEMAPTIGSEGGTLL-------------VRKIPVPGPSRV 120

Query: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV 180
           FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPK 
Sbjct: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKE 180

Query: 181 L----------------------------------NFSIKKDSPVLEVELDVDEMAKNHK 206
                                              NFSIKKDSPVLEVELDVDEMAKNHK
Sbjct: 181 AKDSRAFGPVNMSDIIGRVIYCLRNAVDHGPVQNSNFSIKKDSPVLEVELDVDEMAKNHK 205

[Close]

BLAST of Spo17080.1 vs. NCBI nr
Match: gi|902179296|gb|KNA09324.1| (hypothetical protein SOVF_154700 isoform A [Spinacia oleracea])

HSP 1 Score: 193.4 bits (490), Expect = 4.000e-46
Identity = 125/242 (51.65%), Postives = 134/242 (55.37%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDI--VV 60
           MVSVYTWCRYIAHKLEYSMAVSWK                    +Y G R+  G I   V
Sbjct: 1   MVSVYTWCRYIAHKLEYSMAVSWK--------------------HYKGGRITEGQIGDTV 60

Query: 61  LKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRV 120
            K+        V  L   +G EM      E   +L             ++   +   +RV
Sbjct: 61  WKNLFQGK---VTFLHWNKGQEMAPTIGSEGGTLL-------------VRKIPVPGPSRV 120

Query: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV 180
           FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPK 
Sbjct: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKQ 180

Query: 181 -----------------------------------LNFSIKKDSPVLEVELDVDEMAKNH 206
                                               NFSIKKDSPVLEVELDVDEMAKNH
Sbjct: 181 EAKDSRAFGPVNMSDIIGRVIYCLRNAVDHGPVQNSNFSIKKDSPVLEVELDVDEMAKNH 206

[Close]

BLAST of Spo17080.1 vs. NCBI nr
Match: gi|731336585|ref|XP_010679342.1| (PREDICTED: mitochondrial inner membrane protease subunit 2-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 172.9 bits (437), Expect = 5.600e-40
Identity = 109/240 (45.42%), Postives = 132/240 (55.00%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVSV TWCRYI HKLEYSMAVSWK                    +Y G ++  G +    
Sbjct: 1   MVSVSTWCRYIGHKLEYSMAVSWK--------------------HYKGGQISEGQV---- 60

Query: 61  DPESPNDYLVRRLAATE-GYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVF 120
                 D + + L   +  +   +K E+  P I  +    ++       P      +R+F
Sbjct: 61  -----GDTIWKNLLQGKLTFLHWNKGEEMAPTIGSQGGTLLVRKIPVPGP------SRIF 120

Query: 121 IGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVL 180
           IGD+VVLKDPE+ ++YLVRRLAATEG+EMVSKDEKEEPFILDK+ECWVLADNEALKPK  
Sbjct: 121 IGDVVVLKDPENTDNYLVRRLAATEGFEMVSKDEKEEPFILDKDECWVLADNEALKPKEA 180

Query: 181 ----------------------------------NFSIKKDSPVLEVELDVDEMAKNHKT 206
                                             +FS+KKDSPVLEVELDVDEMAKNHKT
Sbjct: 181 KDSRTFGPVHMSDIIGRVIYCLRNAVDHGPVQNSHFSVKKDSPVLEVELDVDEMAKNHKT 205

[Close]

BLAST of Spo17080.1 vs. NCBI nr
Match: gi|731336583|ref|XP_010679341.1| (PREDICTED: mitochondrial inner membrane protease subunit 2-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 172.2 bits (435), Expect = 9.600e-40
Identity = 109/241 (45.23%), Postives = 132/241 (54.77%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVSV TWCRYI HKLEYSMAVSWK                    +Y G ++  G +    
Sbjct: 1   MVSVSTWCRYIGHKLEYSMAVSWK--------------------HYKGGQISEGQV---- 60

Query: 61  DPESPNDYLVRRLAATE-GYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVF 120
                 D + + L   +  +   +K E+  P I  +    ++       P      +R+F
Sbjct: 61  -----GDTIWKNLLQGKLTFLHWNKGEEMAPTIGSQGGTLLVRKIPVPGP------SRIF 120

Query: 121 IGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV- 180
           IGD+VVLKDPE+ ++YLVRRLAATEG+EMVSKDEKEEPFILDK+ECWVLADNEALKPK  
Sbjct: 121 IGDVVVLKDPENTDNYLVRRLAATEGFEMVSKDEKEEPFILDKDECWVLADNEALKPKQE 180

Query: 181 ----------------------------------LNFSIKKDSPVLEVELDVDEMAKNHK 206
                                              +FS+KKDSPVLEVELDVDEMAKNHK
Sbjct: 181 AKDSRTFGPVHMSDIIGRVIYCLRNAVDHGPVQNSHFSVKKDSPVLEVELDVDEMAKNHK 206

[Close]

BLAST of Spo17080.1 vs. NCBI nr
Match: gi|470107227|ref|XP_004289950.1| (PREDICTED: uncharacterized protein LOC101313855 [Fragaria vesca subsp. vesca])

HSP 1 Score: 156.4 bits (394), Expect = 5.400e-35
Identity = 103/239 (43.10%), Postives = 128/239 (53.56%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVS+ TW RYIAHKLEYS  +SWK   K G+  +   E+              GD V   
Sbjct: 1   MVSLGTWFRYIAHKLEYSATISWK-NYKRGQ--ITDREL--------------GDAVWKN 60

Query: 61  DPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVFI 120
             +    YL       +G EM        P I D+    ++       P       RVF+
Sbjct: 61  LFQGKLTYL----HWNKGAEMA-------PSIGDQGGTLLVRKLPAADP------RRVFV 120

Query: 121 GDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVLN 180
           GD+VVLKDP++P++YLVRRLAA EGYEM+S DEK++PF+L+K+ECWVLADNEALKPK  N
Sbjct: 121 GDVVVLKDPDNPDNYLVRRLAAVEGYEMLSTDEKDDPFVLEKDECWVLADNEALKPKEAN 180

Query: 181 ----------------------------------FSIKKDSPVLEVELDVDEMAKNHKT 206
                                             FS++KDSPVLEVELDVDEMAKNHK+
Sbjct: 181 DSRKFGPVSMTDIVGRVIYCLRTAVDHGPVQNSHFSMRKDSPVLEVELDVDEMAKNHKS 205

[Close]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154700 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.600e-46
Identity = 125/241 (51.87%), Postives = 134/241 (55.60%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDI--VV 60
           MVSVYTWCRYIAHKLEYSMAVSWK                    +Y G R+  G I   V
Sbjct: 1   MVSVYTWCRYIAHKLEYSMAVSWK--------------------HYKGGRITEGQIGDTV 60

Query: 61  LKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRV 120
            K+        V  L   +G EM      E   +L             ++   +   +RV
Sbjct: 61  WKNLFQGK---VTFLHWNKGQEMAPTIGSEGGTLL-------------VRKIPVPGPSRV 120

Query: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV 180
           FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPK 
Sbjct: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKE 180

Query: 181 L----------------------------------NFSIKKDSPVLEVELDVDEMAKNHK 206
                                              NFSIKKDSPVLEVELDVDEMAKNHK
Sbjct: 181 AKDSRAFGPVNMSDIIGRVIYCLRNAVDHGPVQNSNFSIKKDSPVLEVELDVDEMAKNHK 205

[Close]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154700 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.800e-46
Identity = 125/242 (51.65%), Postives = 134/242 (55.37%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDI--VV 60
           MVSVYTWCRYIAHKLEYSMAVSWK                    +Y G R+  G I   V
Sbjct: 1   MVSVYTWCRYIAHKLEYSMAVSWK--------------------HYKGGRITEGQIGDTV 60

Query: 61  LKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRV 120
            K+        V  L   +G EM      E   +L             ++   +   +RV
Sbjct: 61  WKNLFQGK---VTFLHWNKGQEMAPTIGSEGGTLL-------------VRKIPVPGPSRV 120

Query: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV 180
           FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPK 
Sbjct: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKQ 180

Query: 181 -----------------------------------LNFSIKKDSPVLEVELDVDEMAKNH 206
                                               NFSIKKDSPVLEVELDVDEMAKNH
Sbjct: 181 EAKDSRAFGPVNMSDIIGRVIYCLRNAVDHGPVQNSNFSIKKDSPVLEVELDVDEMAKNH 206

[Close]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F2N0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121430 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.900e-40
Identity = 109/240 (45.42%), Postives = 132/240 (55.00%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVSV TWCRYI HKLEYSMAVSWK                    +Y G ++  G +    
Sbjct: 1   MVSVSTWCRYIGHKLEYSMAVSWK--------------------HYKGGQISEGQV---- 60

Query: 61  DPESPNDYLVRRLAATE-GYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVF 120
                 D + + L   +  +   +K E+  P I  +    ++       P      +R+F
Sbjct: 61  -----GDTIWKNLLQGKLTFLHWNKGEEMAPTIGSQGGTLLVRKIPVPGP------SRIF 120

Query: 121 IGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVL 180
           IGD+VVLKDPE+ ++YLVRRLAATEG+EMVSKDEKEEPFILDK+ECWVLADNEALKPK  
Sbjct: 121 IGDVVVLKDPENTDNYLVRRLAATEGFEMVSKDEKEEPFILDKDECWVLADNEALKPKEA 180

Query: 181 ----------------------------------NFSIKKDSPVLEVELDVDEMAKNHKT 206
                                             +FS+KKDSPVLEVELDVDEMAKNHKT
Sbjct: 181 KDSRTFGPVHMSDIIGRVIYCLRNAVDHGPVQNSHFSVKKDSPVLEVELDVDEMAKNHKT 205

[Close]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QRW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G177700 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.400e-34
Identity = 94/242 (38.84%), Postives = 124/242 (51.24%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVS+ TWCRY+ HK+EYS  + WK   K G+ S    +  +         VF G +  L 
Sbjct: 1   MVSLSTWCRYLVHKIEYSFTLGWK-SYKRGQISDRELQDAV------WKNVFQGKLTYLH 60

Query: 61  DPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVFI 120
              S  + +   +    G  +V K    +P                          RVF+
Sbjct: 61  --WSKGEAMAPTIGERGGTLLVRKIPSADP-------------------------GRVFV 120

Query: 121 GDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVLN 180
           GD++V+KDP+  ++YLVRRLAATEGYEMVSKDEK+EPF+L+K++CWVLADNE LKPKVLN
Sbjct: 121 GDVIVMKDPDDSDNYLVRRLAATEGYEMVSKDEKDEPFVLEKDQCWVLADNEKLKPKVLN 180

Query: 181 -------------------------------------FSIKKDSPVLEVELDVDEMAKNH 206
                                                + ++KDSPVLEVELDVD+M KNH
Sbjct: 181 VTKDSRLFGPVPMTGIVGRVIYCLRTAVDHGPVQNSHYGMRKDSPVLEVELDVDDMVKNH 208

[Close]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PT21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G177700 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.400e-34
Identity = 94/242 (38.84%), Postives = 124/242 (51.24%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMILKCVYYHGSRVFIGDIVVLK 60
           MVS+ TWCRY+ HK+EYS  + WK   K G+ S    +  +         VF G +  L 
Sbjct: 1   MVSLSTWCRYLVHKIEYSFTLGWK-SYKRGQISDRELQDAV------WKNVFQGKLTYLH 60

Query: 61  DPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNRVFI 120
              S  + +   +    G  +V K    +P                          RVF+
Sbjct: 61  --WSKGEAMAPTIGERGGTLLVRKIPSADP-------------------------GRVFV 120

Query: 121 GDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKVLN 180
           GD++V+KDP+  ++YLVRRLAATEGYEMVSKDEK+EPF+L+K++CWVLADNE LKPKVLN
Sbjct: 121 GDVIVMKDPDDSDNYLVRRLAATEGYEMVSKDEKDEPFVLEKDQCWVLADNEKLKPKVLN 180

Query: 181 -------------------------------------FSIKKDSPVLEVELDVDEMAKNH 206
                                                + ++KDSPVLEVELDVD+M KNH
Sbjct: 181 EAKDSRLFGPVPMTGIVGRVIYCLRTAVDHGPVQNSHYGMRKDSPVLEVELDVDDMVKNH 208

[Close]

BLAST of Spo17080.1 vs. TAIR (Arabidopsis)
Match: AT2G31140.1 (Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.500e-30
Identity = 90/240 (37.50%), Postives = 114/240 (47.50%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEVKLGEDSLASYEMI-LKCVYYHGSRVFIGDIVVL 60
           M S+ TW RY+AHKLEYS+ +S K       + L+  E+I + C       +F G I  L
Sbjct: 1   MASISTWFRYMAHKLEYSLTLSLKSH---RSNKLSDRELIQIIC-----KNLFYGKITYL 60

Query: 61  KDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNETLKPKILSAWNR-V 120
              + P                            + +      +N  L  KI  A  R V
Sbjct: 61  HSDKGP----------------------------EMSPTMTANENTLLIRKIPIANTRFV 120

Query: 121 FIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEKEEPFILDKNECWVLADNEALKPKV 180
           FIGD VVLKDP   + YLVRRLAA EG+EMVS DEKEEPF+L+KN+CWV A+N+ LK K 
Sbjct: 121 FIGDAVVLKDPNDSDKYLVRRLAAVEGFEMVSGDEKEEPFVLEKNQCWVTAENQELKAKE 180

Query: 181 L----------------------------------NFSIKKDSPVLEVELDVDEMAKNHK 205
                                                ++ +DSP+L VELDVDEMAKNHK
Sbjct: 181 AYDSRTFGPVSTADIVGRAIYCLRTAVDHGPVRNSQTAMGQDSPILAVELDVDEMAKNHK 204

[Close]

BLAST of Spo17080.1 vs. TAIR (Arabidopsis)
Match: AT1G06200.1 (Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.400e-26
Identity = 83/240 (34.58%), Postives = 112/240 (46.67%), Query Frame = 1


		  
Query: 1   MVSVYTWCRYIAHKLEYSMAVSWKLEV--KLGEDSLASYEM----ILKCVYYHGSR---- 60
           M S+  + RY+AHKLEYS+ +S K     KL +  L    M      +  Y H  +    
Sbjct: 1   MASITNYVRYMAHKLEYSLTLSLKKHTREKLSDRELFGVVMKNLFYGRISYLHSDKGKEM 60

Query: 61  -----------------------VFIGDIVVLKDPESPNDYLVRRLAATEGYEMVSKDEK 120
                                  +F+GD VVLKDP   N Y+VRRLAA EG EMVS DEK
Sbjct: 61  APTMGTNESTLLVRKLPVVDTRYIFVGDAVVLKDPNETNKYIVRRLAALEGSEMVSSDEK 120

Query: 121 EEPFILDKNECWVLADNETLKPKILSAWNRVFIGDIVVLKDPESPNDYLVRR---LAATE 180
           +EPF+L+K++CWV+A+N+ +K K   A++    G       P S  D + R    L    
Sbjct: 121 DEPFVLEKDQCWVVAENQEMKSK--EAYDSRTFG-------PISMADIVGRAIYCLRTAV 180

Query: 181 GYEMVSKDEKEEPFILDKNECWVLADNEALKPKVLNFSIKKDSPVLEVELDVDEMAKNHK 205
            +  VS  E                           F++ +DSP+L VELDVDE+AK HK
Sbjct: 181 DHGPVSNSE---------------------------FAMDEDSPILAVELDVDELAKGHK 204

The following BLAST results are available for this feature:

BLAST of Spo17080.1 vs. NCBI nr
BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
BLAST of Spo17080.1 vs. ExPASy Swiss-Prot
BLAST of Spo17080.1 vs. TAIR (Arabidopsis)

BLAST of Spo17080.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902179297\|gb\|KNA09325.1\|	2.4e-46	51.8	hypothetical protein SOVF_1547...	[more]
gi\|902179296\|gb\|KNA09324.1\|	4.0e-46	51.6	hypothetical protein SOVF_1547...	[more]
gi\|731336585\|ref\|XP_010679342.1\|	5.6e-40	45.4	PREDICTED: mitochondrial inner...	[more]
gi\|731336583\|ref\|XP_010679341.1\|	9.6e-40	45.2	PREDICTED: mitochondrial inner...	[more]
gi\|470107227\|ref\|XP_004289950.1\|	5.4e-35	43.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPY2_SPIOL	1.6e-46	51.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9QPX2_SPIOL	2.8e-46	51.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8F2N0_BETVU	3.9e-40	45.4	Uncharacterized protein OS=Bet...	[more]
A0A0D2QRW2_GOSRA	1.4e-34	38.8	Uncharacterized protein OS=Gos...	[more]
A0A0D2PT21_GOSRA	1.4e-34	38.8	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo17080.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17080.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G31140.1	9.5e-30	37.5	Peptidase S24/S26A/S26B/S26C f...	[more]
AT1G06200.1	8.4e-26	34.5	Peptidase S24/S26A/S26B/S26C f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PANTHER	PTHR12383	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	coord: 1..78 score: 1.2E-35coord: 115..204 score: 1.2
IPR015927	Peptidase S24/S26A/S26B/S26C	unknown	SSF51306	LexA/Signal peptidase	coord: 44..104 score: 6.67E-7coord: 112..171 score: 9.9
None	No IPR available	PANTHER	PTHR12383:SF5	PEPTIDASE-S24/S26 DOMAIN-CONTAINING PROTEIN	coord: 115..204 score: 1.2E-35coord: 1..78 score: 1.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0008236	serine-type peptidase activity