Spo17161.1 (mRNA) | SpinachBase

Overview


Name	Spo17161.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	CASP-like protein
Location	chr1 : 19589593 .. 19591856 (-)
Sequence length	615

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTCGCCGCAGTCTCGCAACGGCGGCGACACCTTATCTCCTCCTCCACCACCGCCGCGTAACAACAACTTTCCTCCTTCGCCGCACGATATCCGATTCCACTCGACTCTCTCCGTTCACAAACTGAAAAGATTTAACTCGCTTATACTCGTCTTCCGTATAGCTACCTTCGTGTTTTGTCTTTCCTCCTTCGTCTTCATGCTCACTAACTCCCGCTCTTCTCCTCCGCACTGGTTCGATTTTGACTCATTTAGGTACTCACTCTGGCCACTTCGTGTCGCAGTTCTGCAGTTATTTTTGGTTGTTTAATAATTAACCTTTTTGAATTTGAATTTTTAGGTTTGTGTTGGCGGCGAATGGAATAGTGTCGGTGTATTCATTGGTGGAGATGGTGGTGGCTGTTTGGGAAATCACCACCGGAGCTACTCTTTTTCCCGAGGTTTATCAAGTTTGGTTCGATTTCGGTCACGATCAGGTTTGTTTTCCCGTCATTTTCTCGATTTAATAGTGTAGGACTTGCCTATATAATTTTCCTCATTTAATCTAGTTAATTTGTTCCAATTGAATTTAGTAATCGCAGTAGTTGTTGATGTGGGGGATATCGGGTCGTTTTGCTGGATTTTTATTGGGTTTTGGTCCATCTTTTTCTCCGCTCTTTTTCGTTAAAATTCAAAATTTGAATTTTAGACTTCCAAAGTGTCGTTTTAGGATTTACGGAGTATGATCATTTGAAGCAATCATTGAGACTTTTATCCGTCGAGTTTTCTTAATAAGATTACGGGTTTTGTTAAACATAATGAGGTTTTCTTAATAAGATTACGGGTTTTGTTAAACATAATCCTAGCATCCGATATTCTAATTGTCAAGGCCCGGTTATCCAACACGTCTATTTTCTTCTCTGATTTGGAATTGATATTAGATGATGTAATTAGTTGGTCTCGTGTAAAAAAAGTAATTCTGTAGCCCANTTGGAATTGATATTAGATGATGTAATTAGTTGGTCTCGTGTAAAAAAAGTAATTCTGTAGCCCATCAATTTGTACGAGTGTCCTTTGAAATGGAGCGAGTTTGAGAAAACTATAGTGAATTTGCCTGTCATGTTCTCATGGACAATTTATCCTCTAATGAAAATATCACTAATCTATCACCTAAAAAAAAAAAAATCCTAACAAGCATCATAAATTGGTATTAAGTCGAGAATTTATTACGTACGCGTTGATTGATGTGGTTAATACTTAAATGCTTAGTAATGCGCCCGACCAACATAGTCCGGATGGATGAATAGTACTCCTATTTGACATTGTCTTGGTCATCAACAAACAAGAAATTGGTGCTTCAGTGATGATGGTACTATTGCTAATTGGTATGTTAATTGAGTAATTATTTATTATTACCTAATCAGTTCAAGTTACAAATAGATTTGAAAGAAGTCATCATGCTACAAGAATGAGTTTTTTGTGGTTTGAATTTTGTTGATGCAATATGTACTATTCTGGTTGAAAATTATGTAGTTTGACTTGTAAAAAAGACTTGGACTAGTTGACGTCAACTTTGACTAGTATTTTATCCACTACCGTTTACTCAACGTTAGATTTGGCTCTTATGTGTTGGTATTGAACTTGGTCCCAGTCTAGCTTTTTATGAATGTTGAATACGAAGTATGGAGTACTCCTCCGTAACAATCAGGCAATTGGTAGGGAATTGTCGATAGCTTCTTAAGCAACTTGAGTTGGACTTCATTTTTCTCTTTAGTGATATCTTGTGAAATTTCGCCTCATGTTAGTTGGTAACTTACTAATTTGGCAAAACAACCTATCATTTCTACAACGAACCACATTTTACTCCTTGTTTGTTTGGGATAATGCAAAGTAGAAACATGCCATGTTTCTTTAGATTAGGGAACATTTTTATAGAACGTCTTATAATAATCCATGATATTACATTTGGACAGAGGAAGTATGTTTTTATTTCCTCAAAGAGTTACTACTCCTACTCATAGTGGTAAAAATTATAATTACCAGTCTAAACATATGCTGCAGGTTTTCACCTACATGCTGCTTGCAGCAAACGTAGCAGGATCGACATTCGTAAAGACATTAAAAGGAACAGACACGTGTACGGTCACAAGTGCATTCTGTGTGCAATCCGCCATATCTGTAGCCCTTGGATTTGCTGGATTTCTCTTCATTGCCTTATCCACCGCGATGTCTGGTTTTCGAGTTGTCTGCTTTATGCTCAACGGCACTCGCTTTCATCTTTAA

mRNA sequence

ATGCGGTCGCCGCAGTCTCGCAACGGCGGCGACACCTTATCTCCTCCTCCACCACCGCCGCGTAACAACAACTTTCCTCCTTCGCCGCACGATATCCGATTCCACTCGACTCTCTCCGTTCACAAACTGAAAAGATTTAACTCGCTTATACTCGTCTTCCGTATAGCTACCTTCGTGTTTTGTCTTTCCTCCTTCGTCTTCATGCTCACTAACTCCCGCTCTTCTCCTCCGCACTGGTTCGATTTTGACTCATTTAGGTTTGTGTTGGCGGCGAATGGAATAGTGTCGGTGTATTCATTGGTGGAGATGGTGGTGGCTGTTTGGGAAATCACCACCGGAGCTACTCTTTTTCCCGAGGTTTATCAAGTTTGGTTCGATTTCGGTCACGATCAGGTTTTCACCTACATGCTGCTTGCAGCAAACGTAGCAGGATCGACATTCGTAAAGACATTAAAAGGAACAGACACGTGTACGGTCACAAGTGCATTCTGTGTGCAATCCGCCATATCTGTAGCCCTTGGATTTGCTGGATTTCTCTTCATTGCCTTATCCACCGCGATGTCTGGTTTTCGAGTTGTCTGCTTTATGCTCAACGGCACTCGCTTTCATCTTTAA

Coding sequence (CDS)

ATGCGGTCGCCGCAGTCTCGCAACGGCGGCGACACCTTATCTCCTCCTCCACCACCGCCGCGTAACAACAACTTTCCTCCTTCGCCGCACGATATCCGATTCCACTCGACTCTCTCCGTTCACAAACTGAAAAGATTTAACTCGCTTATACTCGTCTTCCGTATAGCTACCTTCGTGTTTTGTCTTTCCTCCTTCGTCTTCATGCTCACTAACTCCCGCTCTTCTCCTCCGCACTGGTTCGATTTTGACTCATTTAGGTTTGTGTTGGCGGCGAATGGAATAGTGTCGGTGTATTCATTGGTGGAGATGGTGGTGGCTGTTTGGGAAATCACCACCGGAGCTACTCTTTTTCCCGAGGTTTATCAAGTTTGGTTCGATTTCGGTCACGATCAGGTTTTCACCTACATGCTGCTTGCAGCAAACGTAGCAGGATCGACATTCGTAAAGACATTAAAAGGAACAGACACGTGTACGGTCACAAGTGCATTCTGTGTGCAATCCGCCATATCTGTAGCCCTTGGATTTGCTGGATTTCTCTTCATTGCCTTATCCACCGCGATGTCTGGTTTTCGAGTTGTCTGCTTTATGCTCAACGGCACTCGCTTTCATCTTTAA

Protein sequence

MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGFRVVCFMLNGTRFHL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17161	Spo17161	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17161.1	Spo17161.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17161.1.CDS.3	Spo17161.1.CDS.3	CDS
Spo17161.1.CDS.2	Spo17161.1.CDS.2	CDS
Spo17161.1.CDS.1	Spo17161.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17161.1.exon.3	Spo17161.1.exon.3	exon
Spo17161.1.exon.2	Spo17161.1.exon.2	exon
Spo17161.1.exon.1	Spo17161.1.exon.1	exon

Homology

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BLAST of Spo17161.1 vs. NCBI nr
Match: gi|902204308|gb|KNA14831.1| (hypothetical protein SOVF_103840 [Spinacia oleracea])

HSP 1 Score: 401.7 bits (1031), Expect = 7.400e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF
Sbjct: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60

Query: 61  CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV 120
           CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV
Sbjct: 61  CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV 120

Query: 121 YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF 180
           YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF
Sbjct: 121 YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF 180

Query: 181 IALSTAMSGFRVVCFMLNGTRFHL 205
           IALSTAMSGFRVVCFMLNGTRFHL
Sbjct: 181 IALSTAMSGFRVVCFMLNGTRFHL 204

[Close]

BLAST of Spo17161.1 vs. NCBI nr
Match: gi|731318766|ref|XP_010669898.1| (PREDICTED: CASP-like protein 4C2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 316.2 bits (809), Expect = 4.100e-83
Identity = 162/201 (80.60%), Postives = 177/201 (88.06%), Query Frame = 1


		  
Query: 8   NGG---DTLSPPPPPPR-NNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLS 67
           NGG   DTLSPP P  R  NNFPPSPHDIRF STLSVHKLKRFNSLIL+FRIATFVF LS
Sbjct: 18  NGGGDRDTLSPPTPSRRNQNNFPPSPHDIRFQSTLSVHKLKRFNSLILLFRIATFVFSLS 77

Query: 68  SFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQV 127
           SFVFMLTNSRSSPPHWFDFD+FRFVL ANGIV+VYSLVEMV +VW+ITTGATLFPEVYQV
Sbjct: 78  SFVFMLTNSRSSPPHWFDFDAFRFVLTANGIVAVYSLVEMVASVWDITTGATLFPEVYQV 137

Query: 128 WFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIAL 187
           WFDFGHDQVF YMLL+AN AG+  VK LKG++TCT TSAFCVQS IS+ALGFAGFLF+  
Sbjct: 138 WFDFGHDQVFAYMLLSANSAGTALVKMLKGSETCTTTSAFCVQSDISIALGFAGFLFLGF 197

Query: 188 STAMSGFRVVCFMLNGTRFHL 205
           S+  SGFRV CF++NG+RFHL
Sbjct: 198 SSLTSGFRVACFLINGSRFHL 218

[Close]

BLAST of Spo17161.1 vs. NCBI nr
Match: gi|823249391|ref|XP_012457332.1| (PREDICTED: CASP-like protein 4C1 [Gossypium raimondii])

HSP 1 Score: 255.8 bits (652), Expect = 6.600e-65
Identity = 133/205 (64.88%), Postives = 165/205 (80.49%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQ    G++ SP       +N  P+PH   FH+T+++ KLKRFNSLILVFR+  F F
Sbjct: 1   MRSPQGFRNGESPSP-------HNRIPTPH---FHNTVTLRKLKRFNSLILVFRVTAFTF 60

Query: 61  CLSSFVFMLTNSRSS-PPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S VFM+TNSR S  PHWFD+D+FRFV AAN IV++YSL EM V+VWEI+TG+TLFPE
Sbjct: 61  SLASSVFMVTNSRGSGSPHWFDYDAFRFVFAANAIVALYSLFEMGVSVWEISTGSTLFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           + QVWFDFGHDQVF Y+LL+A+ AG+ F KTL+GT TCT +++FCVQS ISVALGFAGFL
Sbjct: 121 ILQVWFDFGHDQVFAYLLLSADSAGTAFAKTLRGTPTCTDSNSFCVQSDISVALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           FI LS+ +SGFRVVCF++NG+RFHL
Sbjct: 181 FIGLSSLLSGFRVVCFIINGSRFHL 195

[Close]

BLAST of Spo17161.1 vs. NCBI nr
Match: gi|567887000|ref|XP_006436022.1| (hypothetical protein CICLE_v10032822mg [Citrus clementina])

HSP 1 Score: 253.1 bits (645), Expect = 4.300e-64
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQS + GDT SP          P  PH   F STLSV KL+RFNSLILVFR+A F F
Sbjct: 1   MRSPQSLHNGDTPSP---------LPRIPH---FQSTLSVQKLRRFNSLILVFRLAAFCF 60

Query: 61  CLSSFVFMLTNSR-SSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S +FMLTNSR S+ P W+D+D+FRFV AAN IV++YSL EM V+VWEI+ GAT FPE
Sbjct: 61  SLASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           V QVWFDFGHDQVF Y+LL+A+ AG+   +TLKGTDTCT  +AFC+QS ISVALGFAGFL
Sbjct: 121 VLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           FI +S+ +SGFRV CF++NG+RFHL
Sbjct: 181 FIGVSSLLSGFRVACFIINGSRFHL 193

[Close]

BLAST of Spo17161.1 vs. NCBI nr
Match: gi|802547276|ref|XP_012089471.1| (PREDICTED: CASP-like protein 4C1 [Jatropha curcas])

HSP 1 Score: 250.4 bits (638), Expect = 2.800e-63
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQS   G+T SP P        PP PH   FHST+SV KLKRFNSLILVFR++TF F
Sbjct: 1   MRSPQSLRNGETPSPHP------RIPP-PH---FHSTVSVQKLKRFNSLILVFRLSTFCF 60

Query: 61  CLSSFVFMLTNSRSSP-PHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S VF LTNSR S  P W+DFD+FR+V AAN IV++YSL EM  +VWEI+ GAT+FPE
Sbjct: 61  SLASAVFTLTNSRGSDSPRWYDFDAFRYVFAANAIVALYSLFEMAASVWEISRGATIFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           V QVWFDFGHDQVF Y+LL+A+ AG    +TLKG DTCT ++AFCVQS I++ALGFAGFL
Sbjct: 121 VLQVWFDFGHDQVFAYLLLSADSAGMALARTLKGGDTCTASNAFCVQSYIAIALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           F+ LS+ +SGFRVVCF+++G+RFHL
Sbjct: 181 FLGLSSLLSGFRVVCFIISGSRFHL 195

[Close]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5P8_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_103840 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 5.200e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF
Sbjct: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60

Query: 61  CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV 120
           CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV
Sbjct: 61  CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV 120

Query: 121 YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF 180
           YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF
Sbjct: 121 YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF 180

Query: 181 IALSTAMSGFRVVCFMLNGTRFHL 205
           IALSTAMSGFRVVCFMLNGTRFHL
Sbjct: 181 IALSTAMSGFRVVCFMLNGTRFHL 204

[Close]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CV57_BETVU (CASP-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g037690 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.800e-83
Identity = 162/201 (80.60%), Postives = 177/201 (88.06%), Query Frame = 1


		  
Query: 8   NGG---DTLSPPPPPPR-NNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLS 67
           NGG   DTLSPP P  R  NNFPPSPHDIRF STLSVHKLKRFNSLIL+FRIATFVF LS
Sbjct: 18  NGGGDRDTLSPPTPSRRNQNNFPPSPHDIRFQSTLSVHKLKRFNSLILLFRIATFVFSLS 77

Query: 68  SFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQV 127
           SFVFMLTNSRSSPPHWFDFD+FRFVL ANGIV+VYSLVEMV +VW+ITTGATLFPEVYQV
Sbjct: 78  SFVFMLTNSRSSPPHWFDFDAFRFVLTANGIVAVYSLVEMVASVWDITTGATLFPEVYQV 137

Query: 128 WFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIAL 187
           WFDFGHDQVF YMLL+AN AG+  VK LKG++TCT TSAFCVQS IS+ALGFAGFLF+  
Sbjct: 138 WFDFGHDQVFAYMLLSANSAGTALVKMLKGSETCTTTSAFCVQSDISIALGFAGFLFLGF 197

Query: 188 STAMSGFRVVCFMLNGTRFHL 205
           S+  SGFRV CF++NG+RFHL
Sbjct: 198 SSLTSGFRVACFLINGSRFHL 218

[Close]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UY08_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_011G256300 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.600e-65
Identity = 133/205 (64.88%), Postives = 165/205 (80.49%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQ    G++ SP       +N  P+PH   FH+T+++ KLKRFNSLILVFR+  F F
Sbjct: 1   MRSPQGFRNGESPSP-------HNRIPTPH---FHNTVTLRKLKRFNSLILVFRVTAFTF 60

Query: 61  CLSSFVFMLTNSRSS-PPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S VFM+TNSR S  PHWFD+D+FRFV AAN IV++YSL EM V+VWEI+TG+TLFPE
Sbjct: 61  SLASSVFMVTNSRGSGSPHWFDYDAFRFVFAANAIVALYSLFEMGVSVWEISTGSTLFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           + QVWFDFGHDQVF Y+LL+A+ AG+ F KTL+GT TCT +++FCVQS ISVALGFAGFL
Sbjct: 121 ILQVWFDFGHDQVFAYLLLSADSAGTAFAKTLRGTPTCTDSNSFCVQSDISVALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           FI LS+ +SGFRVVCF++NG+RFHL
Sbjct: 181 FIGLSSLLSGFRVVCFIINGSRFHL 195

[Close]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Match: V4T7S8_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10032822mg PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.000e-64
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQS + GDT SP          P  PH   F STLSV KL+RFNSLILVFR+A F F
Sbjct: 1   MRSPQSLHNGDTPSP---------LPRIPH---FQSTLSVQKLRRFNSLILVFRLAAFCF 60

Query: 61  CLSSFVFMLTNSR-SSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S +FMLTNSR S+ P W+D+D+FRFV AAN IV++YSL EM V+VWEI+ GAT FPE
Sbjct: 61  SLASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           V QVWFDFGHDQVF Y+LL+A+ AG+   +TLKGTDTCT  +AFC+QS ISVALGFAGFL
Sbjct: 121 VLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           FI +S+ +SGFRV CF++NG+RFHL
Sbjct: 181 FIGVSSLLSGFRVACFIINGSRFHL 193

[Close]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Match: A0A067FJW8_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g029463mg PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.000e-64
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQS + GDT SP          P  PH   F STLSV KL+RFNSLILVFR+A F F
Sbjct: 1   MRSPQSLHNGDTPSP---------LPRIPH---FQSTLSVQKLRRFNSLILVFRLAAFCF 60

Query: 61  CLSSFVFMLTNSR-SSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPE 120
            L+S +FMLTNSR S+ P W+D+D+FRFV AAN IV++YSL EM V+VWEI+ GAT FPE
Sbjct: 61  SLASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPE 120

Query: 121 VYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFL 180
           V QVWFDFGHDQVF Y+LL+A+ AG+   +TLKGTDTCT  +AFC+QS ISVALGFAGFL
Sbjct: 121 VLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFL 180

Query: 181 FIALSTAMSGFRVVCFMLNGTRFHL 205
           FI +S+ +SGFRV CF++NG+RFHL
Sbjct: 181 FIGVSSLLSGFRVACFIINGSRFHL 193

[Close]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Match: CSPL4_RICCO (CASP-like protein 4C1 OS=Ricinus communis GN=RCOM_0464280 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.000e-63
Identity = 127/204 (62.25%), Postives = 158/204 (77.45%), Query Frame = 1


		  
Query: 1   MRSPQSRNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVF 60
           MRSPQS   G+T SP P PPR     P+PH   FHST+S+ KLKRFN LILVFR++TF F
Sbjct: 1   MRSPQSLRNGETPSPSPRPPRF----PTPH---FHSTVSLQKLKRFNLLILVFRLSTFCF 60

Query: 61  CLSSFVFMLTNSRSSPPHWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEV 120
            L+S VFMLTN     P W+ FD+FR+V AAN IV++YSL EM  +VWEI+ G TLFPE+
Sbjct: 61  SLASSVFMLTN-----PTWYHFDAFRYVFAANAIVAIYSLFEMAASVWEISRGNTLFPEI 120

Query: 121 YQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLF 180
            QVWFDFGHDQVF Y+LL+A+ A +   KTLKG DTC  ++AFCVQS I++ALGFAGFLF
Sbjct: 121 LQVWFDFGHDQVFAYLLLSADSAATALAKTLKGGDTCAASNAFCVQSYIAIALGFAGFLF 180

Query: 181 IALSTAMSGFRVVCFMLNGTRFHL 205
           + LS+ +SGFRVVCF++NG+RF++
Sbjct: 181 LGLSSLLSGFRVVCFLINGSRFYV 192

[Close]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Match: CSPLI_POPTR (CASP-like protein 4C2 OS=Populus trichocarpa GN=POPTRDRAFT_822486 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.600e-58
Identity = 123/206 (59.71%), Postives = 149/206 (72.33%), Query Frame = 1


		  
Query: 1   MRSPQS-RNGGDTLSPPPPPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFV 60
           MRSPQ  R+GGDT                     F ST+SV KLKRFNSLILVFR A F 
Sbjct: 1   MRSPQPHRSGGDTQQ------------------HFQSTVSVQKLKRFNSLILVFRFAAFC 60

Query: 61  FCLSSFVFMLTNSRSSPP-HWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFP 120
           F L+S VFMLTNSR S   HW++FD+FR+V AAN IV++YSL EM  +VWEI+  ATLFP
Sbjct: 61  FSLASAVFMLTNSRGSDSLHWYNFDAFRYVFAANAIVAIYSLFEMAASVWEISRNATLFP 120

Query: 121 EVYQVWFDFGHDQVFTYMLLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGF 180
           E+ QVWFDFGHDQVF Y+LL+AN AG+   +TLK  DTCT   AFCVQS I++ LGFAGF
Sbjct: 121 EICQVWFDFGHDQVFAYLLLSANTAGTELARTLK--DTCTDNKAFCVQSDIAIVLGFAGF 180

Query: 181 LFIALSTAMSGFRVVCFMLNGTRFHL 205
           LF+ +S+  SGFRVVCF++NG+RF++
Sbjct: 181 LFLGISSLFSGFRVVCFIINGSRFYV 186

[Close]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Match: CSPLM_POPTR (CASP-like protein 4C1 OS=Populus trichocarpa GN=POPTRDRAFT_820327 PE=3 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 7.300e-56
Identity = 115/188 (61.17%), Postives = 140/188 (74.47%), Query Frame = 1


		  
Query: 18  PPPRNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLSSFVFMLTNSRSSPP 77
           P P  N      H   FHST+S+ KLKRFNSLILVFR + F F L+S VFMLTNSR S  
Sbjct: 4   PQPHRNGGETQQH---FHSTISLQKLKRFNSLILVFRFSAFCFSLASAVFMLTNSRGSDS 63

Query: 78  -HWFDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYM 137
            HW++FD+FR+V AAN IV+VYSL EM  AVWEI+  ATLFPEV QVWFDFGHDQVF Y+
Sbjct: 64  FHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQVWFDFGHDQVFAYL 123

Query: 138 LLAANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGFRVVCFM 197
           LL+AN  G+   +T+K  D CT    FCVQS I++ALGF GFLF+ +S+  SGFRVVCF+
Sbjct: 124 LLSANSTGTEMARTMK--DACTDNKPFCVQSDIAIALGFVGFLFLGVSSLFSGFRVVCFI 183

Query: 198 LNGTRFHL 205
           +NG+RF++
Sbjct: 184 INGSRFYV 186

[Close]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Match: CSPLJ_ARATH (CASP-like protein 4C1 OS=Arabidopsis thaliana GN=At3g55390 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.800e-55
Identity = 105/185 (56.76%), Postives = 137/185 (74.05%), Query Frame = 1


		  
Query: 21  RNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLSSFVFMLTNSR-SSPPHW 80
           RN   P       FHST++  KL+RFNSLIL+ R+A+F F L+S VFMLTNSR S+ PHW
Sbjct: 8   RNGESPTLRDHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAVFMLTNSRGSASPHW 67

Query: 81  FDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYMLLA 140
           +DFD+FRFV  AN IV++YS+ EM   VWE +   TL+PE +QVWFDFGHDQVF+Y+LL+
Sbjct: 68  YDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQVWFDFGHDQVFSYLLLS 127

Query: 141 ANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGFRVVCFMLNG 200
           A  A +   +T++G DTCT   AFC+QS +++ LGFA FLF+A S+  SGFRV CF++ G
Sbjct: 128 AGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAFSSCFSGFRVACFLITG 187

Query: 201 TRFHL 205
           +RFHL
Sbjct: 188 SRFHL 192

[Close]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Match: CSPL8_PHYPA (CASP-like protein 4C3 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192523 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.800e-30
Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = 1


		  
Query: 28  SPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLSSFVFMLTNSR----SSPPHWFDFD 87
           S  D+ ++   +  K +R N +IL+FR  TF F L+S + M TN       S   W+DFD
Sbjct: 10  SSQDVHYYGKSTAQKHRRSNGIILIFRALTFSFSLTSVIVMGTNRHRIDAQSRVAWYDFD 69

Query: 88  SFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYMLLAANVA 147
            FR+VLA N I+ +YS VE+ +AV+         PE +QVWFD+GHDQ F Y+L +AN A
Sbjct: 70  PFRYVLAVNAIICIYSFVEIWLAVYTYLKDTLFLPETFQVWFDYGHDQGFAYLLFSANSA 129

Query: 148 GSTFVKTLK-------GTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGFRV 193
           G    + L+       G   C+    FC Q+  S+ LGF  FLF+ALS+ ++G RV
Sbjct: 130 GIAMAQLLQSGNSLIHGAYRCSDAGVFCTQARASIGLGFGAFLFLALSSLLTGLRV 185

[Close]

BLAST of Spo17161.1 vs. TAIR (Arabidopsis)
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 216.5 bits (550), Expect = 1.600e-56
Identity = 105/185 (56.76%), Postives = 137/185 (74.05%), Query Frame = 1


		  
Query: 21  RNNNFPPSPHDIRFHSTLSVHKLKRFNSLILVFRIATFVFCLSSFVFMLTNSR-SSPPHW 80
           RN   P       FHST++  KL+RFNSLIL+ R+A+F F L+S VFMLTNSR S+ PHW
Sbjct: 8   RNGESPTLRDHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAVFMLTNSRGSASPHW 67

Query: 81  FDFDSFRFVLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYMLLA 140
           +DFD+FRFV  AN IV++YS+ EM   VWE +   TL+PE +QVWFDFGHDQVF+Y+LL+
Sbjct: 68  YDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQVWFDFGHDQVFSYLLLS 127

Query: 141 ANVAGSTFVKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGFRVVCFMLNG 200
           A  A +   +T++G DTCT   AFC+QS +++ LGFA FLF+A S+  SGFRV CF++ G
Sbjct: 128 AGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAFSSCFSGFRVACFLITG 187

Query: 201 TRFHL 205
           +RFHL
Sbjct: 188 SRFHL 192

[Close]

BLAST of Spo17161.1 vs. TAIR (Arabidopsis)
Match: AT5G40300.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 48.9 bits (115), Expect = 4.300e-6
Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = 1


		  
Query: 34  FHSTLSVHKLKRFNSLI----LVFRIATFVFCLSSFVFMLTNSRSSPPH--WFDFDSFRF 93
           F S+ S  +  ++ SLI    L FR+  FV CL SF  M+++      H  ++++  FRF
Sbjct: 103 FSSSSSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRF 162

Query: 94  VLAANGIVSVYSLVEMVVAVWEITTGATLFPEVYQVWFDFGHDQVFTYMLLAANVAGSTF 153
            LAAN I  VYS   +   V+ ++T         + + +FG DQ+  Y+L +A+ + S  
Sbjct: 163 CLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASASTSASIR 222

Query: 154 VKTLKGTDTCTVTSAFCVQSAISVALGFAGFLFIALSTAMSGF 191
           V   +          F   +  SVAL +  F+  A  +  SG+
Sbjct: 223 VDDWQSN---WGADKFPDLARASVALSYVSFVAFAFCSLASGY 262

The following BLAST results are available for this feature:

BLAST of Spo17161.1 vs. NCBI nr
BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
BLAST of Spo17161.1 vs. TAIR (Arabidopsis)

BLAST of Spo17161.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902204308\|gb\|KNA14831.1\|	7.4e-109	100.	hypothetical protein SOVF_1038...	[more]
gi\|731318766\|ref\|XP_010669898.1\|	4.1e-83	80.6	PREDICTED: CASP-like protein 4...	[more]
gi\|823249391\|ref\|XP_012457332.1\|	6.6e-65	64.8	PREDICTED: CASP-like protein 4...	[more]
gi\|567887000\|ref\|XP_006436022.1\|	4.3e-64	65.3	hypothetical protein CICLE_v10...	[more]
gi\|802547276\|ref\|XP_012089471.1\|	2.8e-63	64.8	PREDICTED: CASP-like protein 4...	[more]

BLAST of Spo17161.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R5P8_SPIOL	5.2e-109	100.	CASP-like protein OS=Spinacia ...	[more]
A0A0J8CV57_BETVU	2.8e-83	80.6	CASP-like protein OS=Beta vulg...	[more]
A0A0D2UY08_GOSRA	4.6e-65	64.8	CASP-like protein OS=Gossypium...	[more]
V4T7S8_9ROSI	3.0e-64	65.3	CASP-like protein OS=Citrus cl...	[more]
A0A067FJW8_CITSI	3.0e-64	65.3	CASP-like protein OS=Citrus si...	[more]

BLAST of Spo17161.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CSPL4_RICCO	8.0e-63	62.2	CASP-like protein 4C1 OS=Ricin...	[more]
CSPLI_POPTR	1.6e-58	59.7	CASP-like protein 4C2 OS=Popul...	[more]
CSPLM_POPTR	7.3e-56	61.1	CASP-like protein 4C1 OS=Popul...	[more]
CSPLJ_ARATH	2.8e-55	56.7	CASP-like protein 4C1 OS=Arabi...	[more]
CSPL8_PHYPA	6.8e-30	40.9	CASP-like protein 4C3 OS=Physc...	[more]

BLAST of Spo17161.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G55390.1	1.6e-56	56.7	Uncharacterised protein family...	[more]
AT5G40300.1	4.3e-6	29.4	Uncharacterised protein family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 47..180 score: 6.1
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 13..196 score: 8.9
None	No IPR available	PANTHER	PTHR11615:SF138	SUBFAMILY NOT NAMED	coord: 13..196 score: 8.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane