Spo17337.1 (mRNA)

Overview
NameSpo17337.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description(At1g22630/F12K8_2) (F12K8.2 protein)
LocationSpoScf_00146 : 233356 .. 236106 (+)
Sequence length924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCACAAAGAAACATATGAGATGATGGTGTTATTACCGCATCTCTCTTGCTCTCTCACAAGCTTGCCTTCTCAACACCATAATCATAACAAATTATTTCATGGTGTTACTCCAATAATACAACTTAACAACTTCACAGCTTCTGCTGCTAAATCTGGTGGTTTCCCTTTTAACTTTTTCGTAAGTATATGTAATTAGTAAGTTATATTAGCAACTTTTTTTTTTATTTGTGTGAATGAGCCATAATGACATATAATTTACAAATTAGAAAAGGGAAAATGGAGTATTTTATTTATTGATAATTACTGATTCTTTGATTGATTGCAGGCTTCTTCTAAGAAGTGTGAGACATGTCGAGACCAAGGTGCCATAGAGTGTATTGGATGCAAGGTACCTTAATTATGCTTTGTTAATACTCTGGACTGTTTTATTGTTTTCTTGTTAACCTGTATCATCGTATACTAGTCGGTAAATGTATGTTTGGTTGATAACAACAACAACAACAACAACAACAACAACAACAACAACAAAAAAAAAGCCTCGTTACGTTGTAAGTTTCGATAAATCTATATTATTAAAGCGGAATGTTAGTTAATGTGAGACCTACAAAACCCCAATTCTCAAACCACAATTACTCCATGTCATCACGCTTAACTTTCTTAAATTAAGTCGAACGAAATAAGAAACTACCAAAATCATTAAATTAAAATATCAACAAGAAGGAAAAAAATACTAACAAAACAGAAAAATATTAAAAACTTTAGTCAATTTAAATAATAATATGAATAAAGTTGAAAACTAAAATTAATGATCTATTTACTAATTTTATAGAAATTCCGTGCTAATGCATAGAAAATTAAAGTCGTGTCAAATTATAACTTCCGAAATTTGATGGAGTTGAATAAGTACTAGTCATAGAGGGGATGACTTTTGTAACCCGAACACATGTATACATATTTCTTCTATTTATAAAATTCAACCTCTTTATTACTCTTGCGATTATGTCAAATGGGTCTTGGTTATGGAGGAAGTACAATACATATCAGATATATATGGGCAAATACATGTCAAAACAAAAAACAAAATAGGAAAAAGGACAAAAAAGAAATTAAATGATACTTTTTTAAACATAAATGGTACTTTTTTTACAGAATTGTACTTTTCTTTACAGAATGATACTTTTTTTTACATGAATGGTACTTCCTTTTTTGTCTTTTAGCTATTTGTCTTTTAGTTGATATGACACATATCAGATATGCGAAAAAACAACCTCGTTATAAAAAGTCATTATCCACTTTAAGCTTAAAAGTGGAGAGTTCATCCAAAATCAACAGCTCCTCAAATTTATAACCGTTATTATTTTCTTGAAATAGGACAAATCACAATTTTTTCTCAATCAAAAGGTCTTGCGCGCACAAGGTGCACAATAAATTTATTGTACACCAAAATAACTTTAACTAATTTTTTTGTAACTTTAACTTAGTTTTGATTAACTTTTATATTAGTAAAAAAAATTGATAGATAAATATTTTAAAGGGTTAAATTATTAATTTTATACATTATTAGTGATTTGGAAGAAATAAGTTTTACTAAAATGAAAAAATTTATCACTTAAAAATAGATAACTTTTACATATATATGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTCCGGTGTACAATATTTATTGTACACCCATTGCAAATAAGAATTTGTGTTTCCCAATTGCGTATACTCTTACACTTCATGTAGCTAAACAACGTACACCTCCTAAGTCCTAATCAATCATGACTCATGAATATGAAGTACGATAAACTCCACCAGGCCAAGTACCTTTTTGTACACATAAAGCAATCAACTCCATTAATTATGCTTCTTAATTAATTGTTAATTAAGGTGATGATGTTGTTTATTACACAGGGTACCGGAAGGAACAAAAAGAACGGGAATATTTTTGAGCGATGGAAGTGAGTTAATTATTTAATTAATCTCATATTTAAATGTCGGTGATTAAAATAGCATTAATTAGTATTACCGTCGGCTGATTAGTGATTACTCCCACTAATTAATTAGATGTATATATGGAATTGTTAATAATGATGCACTTTGTAGGTGTTTTGATTGTCAAGGATTTGGATTAAGGAAATGCCCTCAATGTGGAAAAGGAGGTCTCACACCTGAACAAAGAGGAGAAAGATAACTTCATGGCATACGAAGTACCTATTTTCGTACATGTTTTTTTTAAAATAATACTCCGTAATTAAAGCACGTAACATAAACTTAAATCTTATACGGAGTACTTCGTATTTATTATACTTCAAAGCATGTACATTTACTCGGAGTGAGATACAAATTAACACTCTTGCATTAAGTTGAATACTTGAATAGTATTGTTTTCTTTTCATTTTATGCGACCACTTAGCAATGAAGTAACTTTTTGTATACCGTTATATCAGGGGCGGATCTAGGGAGTACATTATTCTCAAAAAAAAAATTAAAAAAAAANATACCGTTATATCAGGGGCGGATCTAGGGAGTACATTATTCTCAAAAAAAAAATTAAAAAAAAATAAAAAACCAAAAATCTGCAAAGGTAAGAGACCAGAGTTGTCAAATATATGGTCTCTTAGGTAATACTAAATAACCTAACAGAGCACATATCAAGCAGGGTAAAGTTTTAATAATTCTAAGAGATCAGTAATTTGGAGAAACCGATCTCTTATATTGATGGATATGAGTTCAGCCG

mRNA sequence

GTGCACAAAGAAACATATGAGATGATGGTGTTATTACCGCATCTCTCTTGCTCTCTCACAAGCTTGCCTTCTCAACACCATAATCATAACAAATTATTTCATGGTGTTACTCCAATAATACAACTTAACAACTTCACAGCTTCTGCTGCTAAATCTGGTGGTTTCCCTTTTAACTTTTTCGCTTCTTCTAAGAAGTGTGAGACATGTCGAGACCAAGGTGCCATAGAGTGTATTGGATGCAAGGGTACCGGAAGGAACAAAAAGAACGGGAATATTTTTGAGCGATGGAAGTGTTTTGATTGTCAAGGATTTGGATTAAGGAAATGCCCTCAATGTGGAAAAGGAGGTCTCACACCTGAACAAAGAGGAGAAAGATAACTTCATGGCATACGAAGTACCTATTTTCGTACATGTTTTTTTTAAAATAATACTCCGTAATTAAAGCACGTAACATAAACTTAAATCTTATACGGAGTACTTCGTATTTATTATACTTCAAAGCATGTACATTTACTCGGAGTGAGATACAAATTAACACTCTTGCATTAAGTTGAATACTTGAATAGTATTGTTTTCTTTTCATTTTATGCGACCACTTAGCAATGAAGTAACTTTTTGTATACCGTTATATCAGGGGCGGATCTAGGGAGTACATTATTCTCAAAAAAAAAATTAAAAAAAAANATACCGTTATATCAGGGGCGGATCTAGGGAGTACATTATTCTCAAAAAAAAAATTAAAAAAAAATAAAAAACCAAAAATCTGCAAAGGTAAGAGACCAGAGTTGTCAAATATATGGTCTCTTAGGTAATACTAAATAACCTAACAGAGCACATATCAAGCAGGGTAAAGTTTTAATAATTCTAAGAGATCAGTAATTTGGAGAAACCGATCTCTTATATTGATGGATATGAGTTCAGCCG

Coding sequence (CDS)

ATGATGGTGTTATTACCGCATCTCTCTTGCTCTCTCACAAGCTTGCCTTCTCAACACCATAATCATAACAAATTATTTCATGGTGTTACTCCAATAATACAACTTAACAACTTCACAGCTTCTGCTGCTAAATCTGGTGGTTTCCCTTTTAACTTTTTCGCTTCTTCTAAGAAGTGTGAGACATGTCGAGACCAAGGTGCCATAGAGTGTATTGGATGCAAGGGTACCGGAAGGAACAAAAAGAACGGGAATATTTTTGAGCGATGGAAGTGTTTTGATTGTCAAGGATTTGGATTAAGGAAATGCCCTCAATGTGGAAAAGGAGGTCTCACACCTGAACAAAGAGGAGAAAGATAA

Protein sequence

MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo17337Spo17337gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo17337.1Spo17337.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17337.1.exon.1Spo17337.1.exon.1exon
Spo17337.1.exon.2Spo17337.1.exon.2exon
Spo17337.1.exon.3Spo17337.1.exon.3exon
Spo17337.1.exon.4Spo17337.1.exon.4exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17337.1.utr5p.1Spo17337.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17337.1.CDS.1Spo17337.1.CDS.1CDS
Spo17337.1.CDS.2Spo17337.1.CDS.2CDS
Spo17337.1.CDS.3Spo17337.1.CDS.3CDS
Spo17337.1.CDS.4Spo17337.1.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17337.1.utr3p.1Spo17337.1.utr3p.1three_prime_UTR


Homology
BLAST of Spo17337.1 vs. NCBI nr
Match: gi|902198619|gb|KNA13727.1| (hypothetical protein SOVF_114200 [Spinacia oleracea])

HSP 1 Score: 258.5 bits (659), Expect = 5.900e-66
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1

		  

Query: 1   MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE 60
           MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE
Sbjct: 1   MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE 60

Query: 61  TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER 119
           TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER
Sbjct: 61  TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER 118

BLAST of Spo17337.1 vs. NCBI nr
Match: gi|731310919|ref|XP_010681812.1| (PREDICTED: uncharacterized protein LOC104896703 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.5 bits (423), Expect = 1.400e-38
Identity = 82/130 (63.08%), Postives = 92/130 (70.77%), Query Frame = 1

		  

Query: 1   MMVLLPHLSCSLTSLPSQHHNHNK------------LFHGVTPIIQLNNFTASAAKSGGF 60
           MM++   LSCSL + PS HH+++             LF     I QL+ FT SAAKSGGF
Sbjct: 2   MMIMSSALSCSLKASPSHHHHYDHIGEFNVRQDCKHLFRDGPRIQQLSKFTTSAAKSGGF 61

Query: 61  PFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKG 119
             N     KKCE CR QGAIEC GCKGTG+NKKNGNIFERWKCF+CQGFGL+ CPQCGKG
Sbjct: 62  SLNI-PGFKKCENCRGQGAIECSGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKG 121

BLAST of Spo17337.1 vs. NCBI nr
Match: gi|848913221|ref|XP_012854738.1| (PREDICTED: uncharacterized protein LOC105974219 [Erythranthe guttata])

HSP 1 Score: 141.7 bits (356), Expect = 8.000e-31
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 1

		  

Query: 37  NFTASAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQG 96
           NFT  AAKSGGF F      K C+TC+ QGA+EC GCKGTG+NKKNGNIFERWKCFDCQG
Sbjct: 28  NFTVHAAKSGGFSF------KSCQTCKGQGAVECQGCKGTGKNKKNGNIFERWKCFDCQG 87

Query: 97  FGLRKCPQCGKGGLTPEQRGER 119
           FG++ CP CGKGGLTPEQRGER
Sbjct: 88  FGMKGCPVCGKGGLTPEQRGER 103

BLAST of Spo17337.1 vs. NCBI nr
Match: gi|596230809|ref|XP_007224291.1| (hypothetical protein PRUPE_ppa019477mg [Prunus persica])

HSP 1 Score: 141.4 bits (355), Expect = 1.000e-30
Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 1

		  

Query: 42  AAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRK 101
           AAKSGGF  N F   KKCETC  +GAIEC+GCKGTGRNKKNGNIFERWKCFDCQGFGL+ 
Sbjct: 39  AAKSGGFSLNSFL--KKCETCGGKGAIECLGCKGTGRNKKNGNIFERWKCFDCQGFGLKG 98

Query: 102 CPQCGKGGLTPEQRGER 119
           CP CG+GGLTPEQRGER
Sbjct: 99  CPTCGQGGLTPEQRGER 113

BLAST of Spo17337.1 vs. NCBI nr
Match: gi|645279979|ref|XP_008244979.1| (PREDICTED: uncharacterized protein LOC103343078 [Prunus mume])

HSP 1 Score: 141.0 bits (354), Expect = 1.400e-30
Identity = 72/121 (59.50%), Postives = 83/121 (68.60%), Query Frame = 1

		  

Query: 2   MVLLPHLSCSLTSLPSQHHNHNKLFHGVTPII----QLNNFTASAAKSGGFPFNFFASSK 61
           M++ P +SC+  SL    H    +   +T  I    +       AAKSGGF  N F   K
Sbjct: 1   MMIKPSMSCN--SLTPHPHPAVPISPQLTSTIIEQKRPRAVAVFAAKSGGFSLNSFL--K 60

Query: 62  KCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGE 119
           KCETC  +GAIEC+GCKGTGRNKKNGNIFERWKCFDCQGFGL+ CP CG+GGLTPEQRGE
Sbjct: 61  KCETCGGKGAIECLGCKGTGRNKKNGNIFERWKCFDCQGFGLKGCPTCGQGGLTPEQRGE 117

BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4J7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114200 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 4.100e-66
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1

		  

Query: 1   MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE 60
           MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE
Sbjct: 1   MMVLLPHLSCSLTSLPSQHHNHNKLFHGVTPIIQLNNFTASAAKSGGFPFNFFASSKKCE 60

Query: 61  TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER 119
           TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER
Sbjct: 61  TCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRKCPQCGKGGLTPEQRGER 118

BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Match: A0A022Q6E7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016872mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.600e-31
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 1

		  

Query: 37  NFTASAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQG 96
           NFT  AAKSGGF F      K C+TC+ QGA+EC GCKGTG+NKKNGNIFERWKCFDCQG
Sbjct: 28  NFTVHAAKSGGFSF------KSCQTCKGQGAVECQGCKGTGKNKKNGNIFERWKCFDCQG 87

Query: 97  FGLRKCPQCGKGGLTPEQRGER 119
           FG++ CP CGKGGLTPEQRGER
Sbjct: 88  FGMKGCPVCGKGGLTPEQRGER 103

BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Match: M5Y1F7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019477mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.300e-31
Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 1

		  

Query: 42  AAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLRK 101
           AAKSGGF  N F   KKCETC  +GAIEC+GCKGTGRNKKNGNIFERWKCFDCQGFGL+ 
Sbjct: 39  AAKSGGFSLNSFL--KKCETCGGKGAIECLGCKGTGRNKKNGNIFERWKCFDCQGFGLKG 98

Query: 102 CPQCGKGGLTPEQRGER 119
           CP CG+GGLTPEQRGER
Sbjct: 99  CPTCGQGGLTPEQRGER 113

BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Match: A0A118JYI6_CYNCS (Heat shock protein DnaJ, cysteine-rich domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_023095 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.200e-30
Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 1

		  

Query: 36  NNFTASAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQ 95
           ++ T+ A+KS GFP N  +  KKCETC  QGAI+C GCKGTG+NKKNGNIFERWKC+DCQ
Sbjct: 30  SSITSHASKSNGFPLN--SIFKKCETCGGQGAIDCGGCKGTGKNKKNGNIFERWKCYDCQ 89

Query: 96  GFGLRKCPQCGKGGLTPEQRGER 119
           GFGLR CP CGKGGLTPEQRGER
Sbjct: 90  GFGLRSCPSCGKGGLTPEQRGER 110

BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Match: M1AJA5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009285 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.800e-29
Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 1

		  

Query: 38  FTASAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGF 97
           F  SAAKSGGF      +  +CE C  +GAIEC GCKGTG+NKKNGNIFERWKCFDCQGF
Sbjct: 32  FITSAAKSGGFSLKSIGN--RCEGCEGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGF 91

Query: 98  GLRKCPQCGKGGLTPEQRGER 119
           GL+ CP CGKGGLTPEQRGER
Sbjct: 92  GLKSCPVCGKGGLTPEQRGER 110

BLAST of Spo17337.1 vs. TAIR (Arabidopsis)
Match: AT1G22630.1 (unknown protein)

HSP 1 Score: 127.9 bits (320), Expect = 4.200e-30
Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 1

		  

Query: 41  SAAKSGGFPFNFFASSKKCETCRDQGAIECIGCKGTGRNKKNGNIFERWKCFDCQGFGLR 100
           SA K G F     +  K CETC  +GAIEC GCKGTG+NKKNGN+FERWKCFDCQGFG++
Sbjct: 35  SAGKIGNFSLG--SIFKSCETCGAKGAIECPGCKGTGKNKKNGNMFERWKCFDCQGFGMK 94

Query: 101 KCPQCGKGGLTPEQRGER 119
            CP+CGKGGLTPEQRGER
Sbjct: 95  SCPKCGKGGLTPEQRGER 110

The following BLAST results are available for this feature:
BLAST of Spo17337.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902198619|gb|KNA13727.1|5.9e-66100.hypothetical protein SOVF_1142... [more]
gi|731310919|ref|XP_010681812.1|1.4e-3863.0PREDICTED: uncharacterized pro... [more]
gi|848913221|ref|XP_012854738.1|8.0e-3175.6PREDICTED: uncharacterized pro... [more]
gi|596230809|ref|XP_007224291.1|1.0e-3081.8hypothetical protein PRUPE_ppa... [more]
gi|645279979|ref|XP_008244979.1|1.4e-3059.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo17337.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R4J7_SPIOL4.1e-66100.Uncharacterized protein OS=Spi... [more]
A0A022Q6E7_ERYGU5.6e-3175.6Uncharacterized protein OS=Ery... [more]
M5Y1F7_PRUPE7.3e-3181.8Uncharacterized protein OS=Pru... [more]
A0A118JYI6_CYNCS1.2e-3074.7Heat shock protein DnaJ, cyste... [more]
M1AJA5_SOLTU6.8e-2974.0Uncharacterized protein OS=Sol... [more]
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BLAST of Spo17337.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17337.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G22630.14.2e-3071.7unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852FAMILY NOT NAMEDcoord: 33..110
score: 1.3
NoneNo IPR availablePANTHERPTHR15852:SF18SUBFAMILY NOT NAMEDcoord: 33..110
score: 1.3

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding