Spo17713.1 (mRNA) | SpinachBase

Overview


Name	Spo17713.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING/FYVE/PHD zinc finger-containing protein, putative
Location	chr5 : 993141 .. 998839 (-)
Sequence length	1674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGGGAGAATATATACAAGACCTAGTTTCACAAACATGTGAAAAATCAAGTGATCAATTCCTAATTTGAAGCAATACCCTCATATTCTTGCAAATAATACCCAACAAAATGGTATTTCTACTTTCTAGGAATCTAATTGATGTAACCTTATTTGTCCTTTTTCTTTTCCTTTTTTTTTGTAGGGATATTTTGGCCTTTTCCTATGGAGAGAGAGAAACAGCTAAGACTGCCAACAAAACAAAAAAATAAACATATCCATTTCAATTTACACTAGTAGGGGTATTATTGAAACTTCACTTCCCCTATTTGATCCTCCTATTTAAACTCCACTTCAAGCTGAAATTTTCAGAGCAGAAAACAGAGGAAAAGAATAACCAAACTAAAAAACAGAGGAAAACAATATTTTTATTTTCTTTTAATTTAAAATAAGAAGAAGAAATACAAGAAATTATTTGAAGATGAGTGAAATTGTATTATTCATAGAAGATTTAGATAATTTCCCGAATTATTGTAGAATTTGTCATGAAGCAGAGTTTGAAAGTTGCAGGAAATTAGAAGCTCCTTGTTCTTGTTCTGGAACAGTCAAGGTATTTTGAAGTAATTCATAATAATTAGTAATATTATTAATTCATATAATTACAAAGTTTTAATTAATTAATTATGTAATATTTGTTATTTTTTGCAGTTTGCTCATAGAGAATGCATTCAAAGATGGTGTGATGAAAAAGGAGATATAATTTGTGAAATTTGCTTACAGGTTTGTTTATTTTCCTCTGTTTCATTCTTTTTTTATTATTTTTTATTTTGATTGTAAATAACTTTTTTATTCATCATACTAGTACATAATATGATCATAATATAACATAATATGTTTTTTTTTTCTTTTCTAAAAGTTAAGTTAATTTTCTACTTTTGTTCTTGATTTTTTTGTTTTCAATTGAAAGAAATACTATGTTTTAAGTTTTTAGTAATTAAATTAAATTAAGTAATACAAAAAACTTTTGTTTTCTAATGAAAATAAGTATCTAAATTTCCCTCCTTGAAGCTTGGCTTTGCCTTCAGTTTTAGTTGTCTTCAACTCAAAGTTTTTTCTTAAACCCAGAATTTCAAAGTTCTAATTTTTTTTCTTTCTTCAAAAATTTTGGAGTATTTAATTTTAATATTTACGATAAGAAAATAATTTTATTTCTATTGAAAGTCAACAAAACATTGACTTTTTAGGTGTTGTACACTTGTACTTTTCTTACAAAATTTGTACACTTCTAATCATTCAACTATAAATTTAAGTGTACATCTGCAATAGATGTCATGTTGAAATTTATCCATTTATAATATTTATCATAATGGCTTATTCACAATTAAAAAAACAAATTTTGGTGCAATCTAAAACGATTTTGCCATTTTTTATTATTATTACCCACTGTTTTATTGGGTTAATTTTTTTATTATAAAATATTTACTGCTATTTTTTTCTGGTGGGAAATTTGAATATTTTTATTTAAAAAAAGTGGGTTAAATTCATGCAGAAATATGAACCAGGATACACAGCAATTCCCAAACAACCCAAGAAAATTGTGGTCTTAGATGAAGTTGTAAGCATCAGGTAACATAATATTTTCCCCTCTTATTCCTTTTTCCTCTATCACAAAAAAAACAAAAAAAATCTCTAGTAAGAAAAGTTAAAAAATGTGTTTGTTATTGGTTGTTGAACCTCTTCCTATATTAACATCCACGTTTACCTAAAAATCACTGAGAAACGAAACGTGGTGAGTATGGTAAAATTGACGTACTCTTTATCTTAATTTCACTATCTGAAACTATCTGTTAGAAAATTAGCCGAACTCTTTATAAAGCGCCATGTATAATATGTTTATTCTAAAATAATGTGATTAGCTAGTTTAATGAAGTTGTAACTATTTTGAAGGGTTAAAAACAGTCCAAAACAATGATGTCAAGTTGTCAACGTTGCTCTACTTCAAATAAAAATAAAACAAGAGCACGCCTACTTGTATTATGTGCTATGAAAAGTTTGGATAATTTTTTGTATAGTTCCACTATTCTAATCAAAATTGTTCCTAGTACCTTGTCACTAATTTTATTAATATTTTAATACTTCAATCTTAGCTTCTTTTTTCTTTTTCTTTTTTTAAATTTATTGTTTAGTTTTTTTATTGTTATACACTATTATTAACACTCCATGATGCATGAGTGTATGGGGAAATTCTAAATTGTTGCTTCCTTATCTCATAAGAAACATCTAGTTAGTAAGCTAGAATTATTTTTGTCAACTCATTATAAAATTATTGGCAACTTTGATTTTGCTTTCTTTTCCTTGTTATCATATGCTTAATGATCTTCTATTCTTCTTTGCATAAGAAAAAAAAAAATCAAACGTAAAATGCTAAAGGTTTAAGGTTTAGACAGTAAAAAGTGTTACCAAAGTTAACTTGTGACTTTGTGTACATTTTTCCCTTGTAGACATCTTTTTACTACCACGACTTAAATTAAGCAAATATGATTTTTATTACTTCGTATTATGATTAGTAAACCGATACATTTTTATATGTAGCGTCTAAACATTAGGCATATCGCGCTACTGTAATAAAATACGTGGAATAGTCACTACAAGAAATTGTACTATTAACGACGGGAAATCCCGTCGCGAAAGGCCAATAATCGTTGATTAACGACGGGATTTCCTGTCGCGGACCCGTCATAAAAGGGGGCCGTCGTTAATAGAAATCCCGTCGTAAATTCGTCGTAAACCCGTCGTAAAAGACATTTGCGACGGTTATTCCCGTCATTGTTTGGTTGTTAGCCCCGTCGTAAAAGGTTTTTGCGACGGGATTTTTAACTCGTCGTAATTAGGTTGTCGTTAAAGATACAAATTCTTGTAGTGAGTATATAATTTGTTTGTGTGATATACTAATAGAAGATTTCAAATTATAGGGGAAGTTTGGAAGTTCCAAGAAGAGAACAAGAATCTCAAAATGAAGAGTTATTAGCCATAGCTGAATGTTCATCAGAAGCAGAAAGAAGTGCTTCTTGTTGCAGAACAGTTGCCATTATTGTAAGTATTTCAATTTTATTTATAATTTTCTAATTTTTCAAAACAATTTATTCACCGCGAAAATTAAATAAATTAGGGTAAAATTACGCACAGTAATACCTTCCTCGCACCCTACTATAACAAAAGCCTTGTGCACTCAGGATGACCTTTTAAAATAACACAAGCACCCTCAAAAACATGAAGGCCCTATTTTTTCACCTTATCGTTACTGTTTATTACTCCGTATTTAGTTTTCTTAAAATCAGACTAGGCCAAACTTTTAAAAAAAGAAAAAGAAAATACTTACAGATACAATCAAACCAGACCAGACCAGTCTAAACAAGAATCAAACCAGACCAGATAAAAAACTAGAAAAATCAGACCAGAATAGGTGAACAGAACAGAGTCGTAACTTATTTGTGCCTACGTATATATAGATAGAAATCTAAACAAAGGATAATGTTTTGATTAGCACAAAACATGTCTTAATCTAAAGGAAGGACCACACATTTGCACACTTTGGTGGGCCATTCATAGAAAGAGGTGTTTGACACCATTGAATGTGTATGAATTGAATTTGCAAAAAAAAAAAAGAGAACATAATAATAGTGGCTATTAGTTAGCCTTGATCATGATATATCACTACAGTCATTATCTTAATCTTTTACTAATTGGACCACTATTATCAGCTGGCACTTAATCATCATCCTTTTCTATTTTCCAAGTCTATCAAATTAAGTTATATCATTCATTAATAAGCTTCACCAATTTTGTTACTTGAATGCATTTAATTCGTACCAAACATAGTTGAGACAACCTTAAGGAGTATTTGGTTTGCATTTTTCTTGCTTTTAAAGTACGTCTCCTTTTATGGATTATTCCAACAACCGATCACTTTGGGTTTCTATATAGGTCGTGTTTAGCCATCAGCGGCTAGATGATAGTCGTTAGCTGGTTTGACTAGTTATTAGCTGTTTGTGTCAGAAGGTTTGACTAGCTAGTTGAATTAGCTGTTTGTGTAAAGTGTTTGGTAAATTAATTGTTTTATGTGTGAAATTATCGTTAAAGACATTGTCATAAAGTGATGTAGGTTTGTGAGACGTGTAAATTATAGACAATATAAGGACAAAAATCATCTTACACCCACTTTTTCCTACCTCTAATGCAAAAACTCCTACGTTGATTCATCCCAAAAGTCGAAAACCATCTTCTAAACCTTTTCAATAAAAAACTCCCATTATCTTTTTGAAGTAGATAAACCTCTAATTTGCATCAAAATGTTTTTTCTACAAACATCTCATAACCAAGCACCCCTGAAACACTCAAAGAAACTATAAATGGATTATCTTTTTTTTTTTTTTTTTTTCCTGAGACTTAAAAATACTAATAATTGTTTTTGCTTGTAATATTGGCAGTTTACAATTCTTTTATTGTTGAGACACACGTTAGATGTGCTACTTGGAGGAGCAGAACAACACCCCTTCTCACTTTTAACCGTAAGCATCTCCATCTTTGATATTTCCTTCCAATTTAGCATCTAATTCAAACTAAAAACATCTAAAATATGAATTTTAAGTTAACATTTCATTGCAAAAATAATGCAGGTACTAATTCTACGTAGTTGTGGAGTAATAGTTCCAATGTACATAATAATTAGGACAATATCAGCTGTCCAAAACAGCATCAGACGGCATCGCGTCCTTCATGTAAGCCTATGATCTCTATACCTTATTTCACTTATTTCACGAAGAATATGGTCAGATAAGTTCAGGAAAAATAATGGTTCAAATAAGTACAATAATTTATAATTAAAATAAGTTTTGATAAGTTCAGAAAAAATAAGTAAAAATCAGGTGAATAGAACATACTCTAACTTTCTAAGATTTTTATGAAAGGGTCAAATTTGTTAAAGATGCATGCCCTTGTTAAGATGTCTTCAAACTTGCTTTACACTTTCATTAGCTTGATTTATTAGTACATTTTAACTAACAAGGATTTATTTTTTTTGGATATCAGGAAAATCTTATGCAAAATACCAATGAGAACAGAGATACATATGACGAGGAGGAGCAAATTCATCAAGTATAGAATGATAAGAACTTGTACATTTTCATAATTATTTTTTAGCTTGTAAAACACCAATGTACATCGACACTCGAAAAAGAAAGAAGAAAAAGAGAAATCCTCAAGAAGGAAAATAGAATAGAAGTTAGTTTGTACATTTTATATGTATAATTGATTAACAATTCATTGTATTTTTTTCAGCCTCATTAACTAGTAAGAAGTATTTGAAAAAGTTTTATGTAAGATCGTATTATACTCACAAGTCATAAGACCGTTGATATCACATAACGATTAACACCATGACTATTAACACAAAAATCATAATTGGTAACATGAAACTTATGCTTATTAACAAAAAATCATAACTATCAAGCCAAAACTACAACTGTTGGGGTGTTAAAATAGGCACACCATTTTAACCCAAAAGCCAATAAAACACACTCAAACCCAATATCACTTACAATGCCTCAAATGCCCAACAAGGCACTATATATACCCCTCAAGGGGTAAGGTAAAGAGGTCATTCTCTAATCCTAGAGAAGCCACCCTACTCTCTATCTCACCCCAAAATACCTCATTTTATA

mRNA sequence

TTATGGGAGAATATATACAAGACCTAGTTTCACAAACATGTGAAAAATCAAGTGATCAATTCCTAATTTGAAGCAATACCCTCATATTCTTGCAAATAATACCCAACAAAATGGTATTTCTACTTTCTAGGAATCTAATTGATGTAACCTTATTTGTCCTTTTTCTTTTCCTTTTTTTTTGTAGGGATATTTTGGCCTTTTCCTATGGAGAGAGAGAAACAGCTAAGACTGCCAACAAAACAAAAAAATAAACATATCCATTTCAATTTACACTAGTAGGGGTATTATTGAAACTTCACTTCCCCTATTTGATCCTCCTATTTAAACTCCACTTCAAGCTGAAATTTTCAGAGCAGAAAACAGAGGAAAAGAATAACCAAACTAAAAAACAGAGGAAAACAATATTTTTATTTTCTTTTAATTTAAAATAAGAAGAAGAAATACAAGAAATTATTTGAAGATGAGTGAAATTGTATTATTCATAGAAGATTTAGATAATTTCCCGAATTATTGTAGAATTTGTCATGAAGCAGAGTTTGAAAGTTGCAGGAAATTAGAAGCTCCTTGTTCTTGTTCTGGAACAGTCAAGTTTGCTCATAGAGAATGCATTCAAAGATGGTGTGATGAAAAAGGAGATATAATTTGTGAAATTTGCTTACAGAAATATGAACCAGGATACACAGCAATTCCCAAACAACCCAAGAAAATTGTGGTCTTAGATGAAGTTGTAAGCATCAGGGGAAGTTTGGAAGTTCCAAGAAGAGAACAAGAATCTCAAAATGAAGAGTTATTAGCCATAGCTGAATGTTCATCAGAAGCAGAAAGAAGTGCTTCTTGTTGCAGAACAGTTGCCATTATTTTTACAATTCTTTTATTGTTGAGACACACGTTAGATGTGCTACTTGGAGGAGCAGAACAACACCCCTTCTCACTTTTAACCGTACTAATTCTACGTAGTTGTGGAGTAATAGTTCCAATGTACATAATAATTAGGACAATATCAGCTGTCCAAAACAGCATCAGACGGCATCGCGTCCTTCATGAAAATCTTATGCAAAATACCAATGAGAACAGAGATACATATGACGAGGAGGAGCAAATTCATCAAGTATAGAATGATAAGAACTTGTACATTTTCATAATTATTTTTTAGCTTGTAAAACACCAATGTACATCGACACTCGAAAAAGAAAGAAGAAAAAGAGAAATCCTCAAGAAGGAAAATAGAATAGAAGTTAGTTTGTACATTTTATATGTATAATTGATTAACAATTCATTGTATTTTTTTCAGCCTCATTAACTAGTAAGAAGTATTTGAAAAAGTTTTATGTAAGATCGTATTATACTCACAAGTCATAAGACCGTTGATATCACATAACGATTAACACCATGACTATTAACACAAAAATCATAATTGGTAACATGAAACTTATGCTTATTAACAAAAAATCATAACTATCAAGCCAAAACTACAACTGTTGGGGTGTTAAAATAGGCACACCATTTTAACCCAAAAGCCAATAAAACACACTCAAACCCAATATCACTTACAATGCCTCAAATGCCCAACAAGGCACTATATATACCCCTCAAGGGGTAAGGTAAAGAGGTCATTCTCTAATCCTAGAGAAGCCACCCTACTCTCTATCTCACCCCAAAATACCTCATTTTATA

Coding sequence (CDS)

ATGAGTGAAATTGTATTATTCATAGAAGATTTAGATAATTTCCCGAATTATTGTAGAATTTGTCATGAAGCAGAGTTTGAAAGTTGCAGGAAATTAGAAGCTCCTTGTTCTTGTTCTGGAACAGTCAAGTTTGCTCATAGAGAATGCATTCAAAGATGGTGTGATGAAAAAGGAGATATAATTTGTGAAATTTGCTTACAGAAATATGAACCAGGATACACAGCAATTCCCAAACAACCCAAGAAAATTGTGGTCTTAGATGAAGTTGTAAGCATCAGGGGAAGTTTGGAAGTTCCAAGAAGAGAACAAGAATCTCAAAATGAAGAGTTATTAGCCATAGCTGAATGTTCATCAGAAGCAGAAAGAAGTGCTTCTTGTTGCAGAACAGTTGCCATTATTTTTACAATTCTTTTATTGTTGAGACACACGTTAGATGTGCTACTTGGAGGAGCAGAACAACACCCCTTCTCACTTTTAACCGTACTAATTCTACGTAGTTGTGGAGTAATAGTTCCAATGTACATAATAATTAGGACAATATCAGCTGTCCAAAACAGCATCAGACGGCATCGCGTCCTTCATGAAAATCTTATGCAAAATACCAATGAGAACAGAGATACATATGACGAGGAGGAGCAAATTCATCAAGTATAG

Protein sequence

MSEIVLFIEDLDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIHQV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17713	Spo17713	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17713.1	Spo17713.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17713.1.utr5p.1	Spo17713.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17713.1.CDS.7	Spo17713.1.CDS.7	CDS
Spo17713.1.CDS.6	Spo17713.1.CDS.6	CDS
Spo17713.1.CDS.5	Spo17713.1.CDS.5	CDS
Spo17713.1.CDS.4	Spo17713.1.CDS.4	CDS
Spo17713.1.CDS.3	Spo17713.1.CDS.3	CDS
Spo17713.1.CDS.2	Spo17713.1.CDS.2	CDS
Spo17713.1.CDS.1	Spo17713.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17713.1.utr3p.1	Spo17713.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17713.1.exon.7	Spo17713.1.exon.7	exon
Spo17713.1.exon.6	Spo17713.1.exon.6	exon
Spo17713.1.exon.5	Spo17713.1.exon.5	exon
Spo17713.1.exon.4	Spo17713.1.exon.4	exon
Spo17713.1.exon.3	Spo17713.1.exon.3	exon
Spo17713.1.exon.2	Spo17713.1.exon.2	exon
Spo17713.1.exon.1	Spo17713.1.exon.1	exon

Homology

[Close]

BLAST of Spo17713.1 vs. NCBI nr
Match: gi|731324366|ref|XP_010672934.1| (PREDICTED: uncharacterized protein LOC104889416 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.200e-94
Identity = 178/217 (82.03%), Postives = 194/217 (89.40%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPNY-CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGD 60
           M EIVLFI+DLD    Y CRICHEAEFESCRKLE PCSCSGTVKFAHR+CIQRWCDEKGD
Sbjct: 1   MEEIVLFIDDLDTSSYYYCRICHEAEFESCRKLETPCSCSGTVKFAHRDCIQRWCDEKGD 60

Query: 61  IICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSE 120
           IICE+CLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLE+PR EQ  QN +LLAIAECSSE
Sbjct: 61  IICELCLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEIPRTEQAPQNPDLLAIAECSSE 120

Query: 121 AERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRT 180
           AERSASCCRTVA+IFT LLL+RH LDVLLGGAE HPFS+LTVLILR CGVI+PMY+II+T
Sbjct: 121 AERSASCCRTVALIFTFLLLMRHMLDVLLGGAEYHPFSILTVLILRGCGVIIPMYVIIQT 180

Query: 181 ISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIHQ 217
           ISA+QNSI+R+R+LHEN M NTN  R   D EEQ+HQ
Sbjct: 181 ISALQNSIKRNRILHENFMLNTNGVR-VADIEEQVHQ 216

[Close]

BLAST of Spo17713.1 vs. NCBI nr
Match: gi|902240622|gb|KNA26030.1| (hypothetical protein SOVF_000990 [Spinacia oleracea])

HSP 1 Score: 284.6 bits (727), Expect = 1.400e-73
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 1


		  
Query: 66  LQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS 125
           +QKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS
Sbjct: 1   MQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS 60

Query: 126 CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQN 185
           CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTIS VQN
Sbjct: 61  CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISVVQN 120

Query: 186 SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV 218
           SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV
Sbjct: 121 SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV 152

[Close]

BLAST of Spo17713.1 vs. NCBI nr
Match: gi|225437543|ref|XP_002275880.1| (PREDICTED: uncharacterized protein LOC100260678 isoform X2 [Vitis vinifera])

HSP 1 Score: 256.9 bits (655), Expect = 3.100e-65
Identity = 129/220 (58.64%), Postives = 172/220 (78.18%), Query Frame = 1


		  
Query: 1   MSEIVLFIED--LDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M ++VLF++D  L++   +CRICHEAEFESC+ LEAPC+CSGTVKFAHR+CIQRWC+EKG
Sbjct: 1   MGDVVLFVDDFELNSAVPHCRICHEAEFESCKTLEAPCACSGTVKFAHRDCIQRWCNEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIA---E 120
           +  CEICLQ+YEPGYTA P  PKK  ++D  V+IRGSLE+PRR QE ++   +A+A   E
Sbjct: 61  NTTCEICLQEYEPGYTA-PPPPKKAQLVDVAVTIRGSLEIPRRRQELEDPRRVAMADGPE 120

Query: 121 CSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYI 180
           C++ A+R ASCCR VA+IFT+LLL+RH   V+ G  E +PF+LLT+LILR+ G+I+PMYI
Sbjct: 121 CTAAADRGASCCRVVALIFTVLLLVRHLFAVVTGSTEDYPFTLLTLLILRTSGIILPMYI 180

Query: 181 IIRTISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIH 216
           +IRTISA+QNSIR H   +++  ++  E  D  DEE+ +H
Sbjct: 181 VIRTISAIQNSIREH--YYDSEDESPEEVDDEEDEEQPLH 217

[Close]

BLAST of Spo17713.1 vs. NCBI nr
Match: gi|731395637|ref|XP_010652236.1| (PREDICTED: uncharacterized protein LOC100260678 isoform X1 [Vitis vinifera])

HSP 1 Score: 256.1 bits (653), Expect = 5.300e-65
Identity = 129/220 (58.64%), Postives = 171/220 (77.73%), Query Frame = 1


		  
Query: 1   MSEIVLFIED--LDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M ++VLF++D  L++   +CRICHEAEFESC+ LEAPC+CSGTVKFAHR+CIQRWC+EKG
Sbjct: 1   MGDVVLFVDDFELNSAVPHCRICHEAEFESCKTLEAPCACSGTVKFAHRDCIQRWCNEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIA---E 120
           +  CEICLQ+YEPGYTA P  PKK  ++D  V+IRGSLE+PRR QE ++   +A+A   E
Sbjct: 61  NTTCEICLQEYEPGYTA-PPPPKKAQLVDVAVTIRGSLEIPRRRQELEDPRRVAMADGPE 120

Query: 121 CSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYI 180
           C++ A+R ASCCR VA+IFT+LLL+RH   V+ G  E +PF+LLT+LILR+ G+I+PMYI
Sbjct: 121 CTAAADRGASCCRVVALIFTVLLLVRHLFAVVTGSTEDYPFTLLTLLILRTSGIILPMYI 180

Query: 181 IIRTISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIH 216
           +IRTISA+QNSIR H    ++  ++  E  D  DEE+ +H
Sbjct: 181 VIRTISAIQNSIREH-YYQDSEDESPEEVDDEEDEEQPLH 218

[Close]

BLAST of Spo17713.1 vs. NCBI nr
Match: gi|1009148052|ref|XP_015891739.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 243.4 bits (620), Expect = 3.600e-61
Identity = 122/225 (54.22%), Postives = 167/225 (74.22%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFP--NYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M +++LF++DL   P  +YCRICHE EFE+   LEAPCSCSGTVKFAHR+CIQRWC+EKG
Sbjct: 1   MGDVILFVQDLKLNPGISYCRICHEGEFENSNSLEAPCSCSGTVKFAHRDCIQRWCNEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIA---- 120
           +  CEICLQ YEPGYTA+   PKK  ++D  V+IR SL++PRREQE  +  L ++A    
Sbjct: 61  NTTCEICLQNYEPGYTAL---PKKSQLIDAAVTIRESLQIPRREQEPLSPRLASLAEGVS 120

Query: 121 ------ECSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCG 180
                 EC+S A+RSASCCR++A+  T++LL+RH   V  GGAE +PF+LLT++ILR+ G
Sbjct: 121 LENDDSECNSAADRSASCCRSLALAITVILLVRHLFAVFNGGAEDYPFTLLTIIILRASG 180

Query: 181 VIVPMYIIIRTISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQ 214
           +I+PMY++IRTI+A+QNSIRRH     +   + +E+  T+D +E+
Sbjct: 181 IILPMYLLIRTITALQNSIRRH-----HTQDSDDEDSSTFDGDEE 217

[Close]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FGV2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062170 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.200e-94
Identity = 178/217 (82.03%), Postives = 194/217 (89.40%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPNY-CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGD 60
           M EIVLFI+DLD    Y CRICHEAEFESCRKLE PCSCSGTVKFAHR+CIQRWCDEKGD
Sbjct: 1   MEEIVLFIDDLDTSSYYYCRICHEAEFESCRKLETPCSCSGTVKFAHRDCIQRWCDEKGD 60

Query: 61  IICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSE 120
           IICE+CLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLE+PR EQ  QN +LLAIAECSSE
Sbjct: 61  IICELCLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEIPRTEQAPQNPDLLAIAECSSE 120

Query: 121 AERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRT 180
           AERSASCCRTVA+IFT LLL+RH LDVLLGGAE HPFS+LTVLILR CGVI+PMY+II+T
Sbjct: 121 AERSASCCRTVALIFTFLLLMRHMLDVLLGGAEYHPFSILTVLILRGCGVIIPMYVIIQT 180

Query: 181 ISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIHQ 217
           ISA+QNSI+R+R+LHEN M NTN  R   D EEQ+HQ
Sbjct: 181 ISALQNSIKRNRILHENFMLNTNGVR-VADIEEQVHQ 216

[Close]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2R4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_000990 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.800e-74
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 1


		  
Query: 66  LQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS 125
           +QKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS
Sbjct: 1   MQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSSEAERSAS 60

Query: 126 CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQN 185
           CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTIS VQN
Sbjct: 61  CCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISVVQN 120

Query: 186 SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV 218
           SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV
Sbjct: 121 SIRRHRVLHENLMQNTNENRDTYDEEEQIHQV 152

[Close]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Match: D7U2H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01360 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.700e-65
Identity = 129/220 (58.64%), Postives = 171/220 (77.73%), Query Frame = 1


		  
Query: 1   MSEIVLFIED--LDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M ++VLF++D  L++   +CRICHEAEFESC+ LEAPC+CSGTVKFAHR+CIQRWC+EKG
Sbjct: 1   MGDVVLFVDDFELNSAVPHCRICHEAEFESCKTLEAPCACSGTVKFAHRDCIQRWCNEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIA---E 120
           +  CEICLQ+YEPGYTA P  PKK  ++D  V+IRGSLE+PRR QE ++   +A+A   E
Sbjct: 61  NTTCEICLQEYEPGYTA-PPPPKKAQLVDVAVTIRGSLEIPRRRQELEDPRRVAMADGPE 120

Query: 121 CSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYI 180
           C++ A+R ASCCR VA+IFT+LLL+RH   V+ G  E +PF+LLT+LILR+ G+I+PMYI
Sbjct: 121 CTAAADRGASCCRVVALIFTVLLLVRHLFAVVTGSTEDYPFTLLTLLILRTSGIILPMYI 180

Query: 181 IIRTISAVQNSIRRHRVLHENLMQNTNENRDTYDEEEQIH 216
           +IRTISA+QNSIR H    ++  ++  E  D  DEE+ +H
Sbjct: 181 VIRTISAIQNSIREH-YYQDSEDESPEEVDDEEDEEQPLH 218

[Close]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Match: V4TW32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021987mg PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.600e-60
Identity = 123/235 (52.34%), Postives = 169/235 (71.91%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFP---NYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEK 60
           M ++VLF+ED  + P   ++CRICHE EFESC  LEAPC+CSGTVKFAHR+CIQRWC EK
Sbjct: 1   MGDVVLFVEDFKSNPETKSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEK 60

Query: 61  GDIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAE-- 120
           G+  CEICLQ+Y PGYTA     KK  +++  V+IR SL++PRRE   +N  L+AIAE  
Sbjct: 61  GNTTCEICLQEYGPGYTA---PSKKSQLIEAAVTIRDSLQIPRREHVPRNPRLVAIAERL 120

Query: 121 --------CSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSC 180
                   CSS A+R+A+CCR++A+ FT+LLL++H   VL G  + +PF+L+TVL+LR+C
Sbjct: 121 SAESHYPQCSSAADRTAACCRSLALTFTVLLLVKHLFAVLTGNTDDYPFALVTVLLLRAC 180

Query: 181 GVIVPMYIIIRTISAVQNSIRR--HRVLHENLMQNTNENR------DTYDEEEQI 215
           G+I+PMY+++RTI+A+ NSIRR  H V +++   N++E        D  DEEEQ+
Sbjct: 181 GIILPMYVLMRTITAIHNSIRREYHHVTYDDETSNSDEEEEEEEDDDDDDEEEQL 232

[Close]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Match: A0A059AX87_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01050 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.200e-60
Identity = 123/223 (55.16%), Postives = 163/223 (73.09%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPN--YCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M +++LF++DL +     YCRICH+AEFES + LEAPC CSGTVK+AHR+CIQRWCDEKG
Sbjct: 1   MGDVLLFVDDLPSSSPVPYCRICHDAEFESEQSLEAPCGCSGTVKYAHRDCIQRWCDEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLA------ 120
              CEICLQ YEPGYTA P   KK  +++  V+IR SL+VPR E E Q+   LA      
Sbjct: 61  STTCEICLQNYEPGYTAAPS--KKSQLIEAAVTIRDSLQVPRAEPEPQSPTSLAPGAPIE 120

Query: 121 --IAECSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVI 180
              +EC+S A+R A+CCR +A+ FT+ LLLRH LDVL G  E++PF+L+TVL+LR  G++
Sbjct: 121 AVYSECASAADRGAACCRALALTFTVFLLLRHMLDVLSGRPEEYPFALVTVLVLRMSGIV 180

Query: 181 VPMYIIIRTISAVQNSIR-RHRVLHENLMQNTNENRDTYDEEE 213
           VPMYI+IRTI+AVQNSIR R+ V+ +  + +  E+ D  D+E+
Sbjct: 181 VPMYILIRTITAVQNSIRQRYHVVGDETLNDEEEDEDDDDDED 221

[Close]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Match: MARH2_HUMAN (E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.700e-7
Identity = 22/67 (32.84%), Postives = 37/67 (55.22%), Query Frame = 1


		  
Query: 17  YCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYEPGYTAI 76
           +CRICHE     C  L +PC C+GT+   H+ C+++W        CE+C  ++     A+
Sbjct: 63  FCRICHEGANGEC--LLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF-----AV 122

Query: 77  PKQPKKI 84
            K+P+ +
Sbjct: 123 EKRPRPL 122

[Close]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Match: SUD1_ARATH (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana GN=SUD1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.700e-7
Identity = 23/86 (26.74%), Postives = 44/86 (51.16%), Query Frame = 1


		  
Query: 7   FIEDLDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICL 66
           +++D ++  + CRIC     ++   L  PC+CSG++KF H++C+ +W +      CE+C 
Sbjct: 57  YVDDDEDEEDVCRICRNPG-DADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK 116

Query: 67  QKYEPGYTAIPKQPKKIVVLDEVVSI 93
             +          P ++   + VV I
Sbjct: 117 HPFSFSPVYADNAPSRLPFQEFVVGI 141

[Close]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Match: MARH2_MOUSE (E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.100e-6
Identity = 23/83 (27.71%), Postives = 45/83 (54.22%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDI 60
           +S ++  ++   + P +CRICHE    +   L +PC C+GT+   H+ C+++W       
Sbjct: 48  LSTVIRALDSQSDCP-FCRICHEGA--NGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTS 107

Query: 61  ICEICLQKYEPGYTAIPKQPKKI 84
            CE+C  ++     A+ K+P+ +
Sbjct: 108 YCELCHTEF-----AVEKRPRPL 122

[Close]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Match: MARH2_BOVIN (E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.500e-6
Identity = 23/65 (35.38%), Postives = 36/65 (55.38%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDI 60
           +S ++  +E   + P +CRICHE    +   L +PC CSGT+   H+ C++RW       
Sbjct: 48  LSTVIRALETPSDGP-FCRICHEGA--NGESLLSPCGCSGTLGAVHKSCLERWLSSSNTS 107

Query: 61  ICEIC 66
            CE+C
Sbjct: 108 YCELC 109

[Close]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Match: MARH4_DANRE (E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.900e-6
Identity = 21/53 (39.62%), Postives = 32/53 (60.38%), Query Frame = 1


		  
Query: 18  CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYE 71
           CRIC +   +   +L +PC CSG+V+  H  C+ +W  E+G   CE+C  KY+
Sbjct: 143 CRICFQGPEQG--ELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQ 193

[Close]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.000e-49
Identity = 104/226 (46.02%), Postives = 154/226 (68.14%), Query Frame = 1


		  
Query: 1   MSEIVLFIED--LDNFPNYCRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M ++VLFI++  L +  N CRICHE E ES    EAPCSCSGT+KFAHR+CIQRWCDEKG
Sbjct: 1   MGDVVLFIDETYLKSSFNRCRICHEEEAESY--FEAPCSCSGTIKFAHRDCIQRWCDEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQ-------NEELL 120
           + ICEICLQ+Y+PGYT   K  +    ++  V+IR +L + RRE   +       N E  
Sbjct: 61  NTICEICLQEYKPGYTTTSKPSR---FIETAVTIRDNLHIMRRENGRRRRNRRLVNREES 120

Query: 121 AIAECSSEAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIV 180
              EC+S  +R ASCCR +A+IF+++LL++H  D +  G E++P+++ TVL L++ G+++
Sbjct: 121 DFQECNSGVDRGASCCRYLALIFSVILLIKHAFDAVY-GTEEYPYTIFTVLTLKAIGILL 180

Query: 181 PMYIIIRTISAVQNSIRRHRVL--HENLMQNTNENRDTYDEEEQIH 216
           PM +IIRTI+A+Q S+ R+++L   E+ + +  E+    +EE+Q H
Sbjct: 181 PMLVIIRTITAIQRSL-RYQILESEEDTLSSEEEDHGLEEEEQQQH 219

[Close]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 178.7 bits (452), Expect = 3.800e-45
Identity = 99/222 (44.59%), Postives = 147/222 (66.22%), Query Frame = 1


		  
Query: 1   MSEIVLFIEDLDNFPNY--CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKG 60
           M +++LFI+D  +      CRICHE E ES    E PC+CSGTVKFAHR CIQRWC+EKG
Sbjct: 1   MGDVILFIDDTKSKVRITRCRICHEEEEESF--FEVPCACSGTVKFAHRNCIQRWCNEKG 60

Query: 61  DIICEICLQKYEPGYTAIPKQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAECSS 120
           +  CEICLQ Y+ GYTA+ KQ K   ++++ V+IR +    RR +   +     I++C+S
Sbjct: 61  NTTCEICLQVYKDGYTAVLKQSK---LIEQEVTIRVNGRRRRRSRRLVSIAESDISQCNS 120

Query: 121 EAERSASCCRTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIR 180
            A+R AS CR++    ++ LL++HT DV+  G E++PFS+ TVL L++ G+++PM+IIIR
Sbjct: 121 VADRGASFCRSLTFTLSVFLLMKHTFDVIY-GTEEYPFSVFTVLTLKAIGILLPMFIIIR 180

Query: 181 TISAVQNSIRRHRVLHEN-----LMQNTNENRDTYDEEEQIH 216
           TIS +Q ++RR     E+     L  + +++ +  DEE+Q H
Sbjct: 181 TISTIQKTLRRRHQYPESEEEDRLSSDDDDDLEEEDEEQQQH 216

[Close]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.300e-32
Identity = 77/204 (37.75%), Postives = 120/204 (58.82%), Query Frame = 1


		  
Query: 18  CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYEPGYTAIP 77
           CRICH+ + +S   +E PCSCSG+VK+AHR C+QRWC+EKGD  CEIC Q+++P YTA  
Sbjct: 59  CRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTA-- 118

Query: 78  KQPKKIVVLDEV-VSIRGSLEVPRREQESQNEELLAIAECSS---------EAERSASCC 137
             P  ++ L  V +  RG+  + +RE        + +    S          +  S  CC
Sbjct: 119 --PPPLLELGHVPLHFRGNWGISQREHR-----FITVVPADSTFIDQPYPLSSTTSFICC 178

Query: 138 RTVAIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQNSI 197
           R++ +IF  LL+LRHTL ++L G+  H F L T+L LR  G+++P+Y++ + ++    + 
Sbjct: 179 RSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA----TC 238

Query: 198 RRHRVLHENLMQNTNENRDTYDEE 212
           RRH     +   +T+ + D+ DEE
Sbjct: 239 RRH-----SRTLDTSPSDDSSDEE 242

[Close]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 3.800e-29
Identity = 65/174 (37.36%), Postives = 104/174 (59.77%), Query Frame = 1


		  
Query: 18  CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYEPGYTAIP 77
           CRICH+ + ++   ++ PCSCSGT+KFAH  C+QRWC+EKGD +CEIC Q+Y+PGYTA  
Sbjct: 54  CRICHDEDEDT--NMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTA-- 113

Query: 78  KQPKKIVVLDEVVSIRGSLEVPRREQESQNEELLAIAEC-------SSEAERSASCCRTV 137
             P+++     +    GS +      + +N   L   +        S  +  S  CCR +
Sbjct: 114 --PRQLFHYTGISMNFGS-DWGIEGLDLRNPYFLTWGDADDDHDLYSFHSPTSLICCRLI 173

Query: 138 AIIFTILLLLRHTLDVLLGGAEQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQ 185
           A++F +LL LRH+L VLLGG +    +LL + ++R+ G+++  Y+  ++   +Q
Sbjct: 174 ALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQ 220

[Close]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 4.700e-27
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 1


		  
Query: 18  CRICHEAEFESCRKLEAPCSCSGTVKFAHRECIQRWCDEKGDIICEICLQKYEPGYTAIP 77
           CRIC E +  S + LE+PCSCSG++K+AHR+C+QRWC+EKGD  CEIC + Y+PGYTA P
Sbjct: 78  CRICQEED--SVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTAPP 137

Query: 78  KQPKKIVVLDEVV----SIRGSLEVPRREQESQNEELLAIAECSSEAERS---ASCCRTV 137
             P    ++D        +   L  PR    +  E     A+    A+ +   A+ CR+ 
Sbjct: 138 PPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFCRSA 197

Query: 138 AIIFTILLLLRHTLDVLLGGA---EQHPFSLLTVLILRSCGVIVPMYIIIRTISAVQNSI 192
           A+I   LLLLRH L++    +   E  P +   + +LR+ G ++P YI+   IS +Q   
Sbjct: 198 ALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQR-- 257

The following BLAST results are available for this feature:

BLAST of Spo17713.1 vs. NCBI nr
BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
BLAST of Spo17713.1 vs. TAIR (Arabidopsis)

BLAST of Spo17713.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731324366\|ref\|XP_010672934.1\|	3.2e-94	82.0	PREDICTED: uncharacterized pro...	[more]
gi\|902240622\|gb\|KNA26030.1\|	1.4e-73	98.6	hypothetical protein SOVF_0009...	[more]
gi\|225437543\|ref\|XP_002275880.1\|	3.1e-65	58.6	PREDICTED: uncharacterized pro...	[more]
gi\|731395637\|ref\|XP_010652236.1\|	5.3e-65	58.6	PREDICTED: uncharacterized pro...	[more]
gi\|1009148052\|ref\|XP_015891739.1\|	3.6e-61	54.2	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo17713.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8FGV2_BETVU	2.2e-94	82.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9S2R4_SPIOL	9.8e-74	98.6	Uncharacterized protein OS=Spi...	[more]
D7U2H4_VITVI	3.7e-65	58.6	Putative uncharacterized prote...	[more]
V4TW32_9ROSI	3.6e-60	52.3	Uncharacterized protein OS=Cit...	[more]
A0A059AX87_EUCGR	6.2e-60	55.1	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo17713.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
MARH2_HUMAN	8.7e-7	32.8	E3 ubiquitin-protein ligase MA...	[more]
SUD1_ARATH	8.7e-7	26.7	Probable E3 ubiquitin ligase S...	[more]
MARH2_MOUSE	1.1e-6	27.7	E3 ubiquitin-protein ligase MA...	[more]
MARH2_BOVIN	1.5e-6	35.3	E3 ubiquitin-protein ligase MA...	[more]
MARH4_DANRE	1.9e-6	39.6	E3 ubiquitin-protein ligase MA...	[more]

BLAST of Spo17713.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G02610.1	2.0e-49	46.0	RING/FYVE/PHD zinc finger supe...	[more]
AT4G02075.1	3.8e-45	44.5	RING/FYVE/PHD zinc finger supe...	[more]
AT2G01275.1	6.3e-32	37.7	RING/FYVE/PHD zinc finger supe...	[more]
AT5G38070.1	3.8e-29	37.3	RING/FYVE/PHD zinc finger supe...	[more]
AT5G62460.1	4.7e-27	39.1	RING/FYVE/PHD zinc finger supe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 18..65 score: 6.4
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 17..66 score: 7.9
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 10..72 score: 20
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 16..70 score: 9.3
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 71..180 score: 2.8
None	No IPR available	PANTHER	PTHR23012:SF93	RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN	coord: 18..191 score: 2.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 15..70 score: 6.36

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding