Spo17769.1 (mRNA) | SpinachBase

Overview


Name	Spo17769.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein S24e family protein, putative
Location	chr1 : 7068234 .. 7074354 (-)
Sequence length	1281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAATAATAAAATATTAATCGTTAATAAGTTCAGACTGGGCTCTACTCTCTAAGCCCAGCCCATTAGTACCCATCTTCACTAAGCTCTAAGTCTTCCCCACTAAAACCCTCTTCGGCTCTTTCTGCAAATTTCTTCCCTTCGTTAATCACATCTTCCTCCTTTCTTCGAAATCAGCCATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTCGTTCAGTTCTCTCCCATTTCGTTTGTTTTTGTTGCAATTTTCATCAACAGTATTCCGCATTTTGTTTTTCCTGTGGGTTTTATTAGGGTTTTTGGGCATAGATTGTACGATAATTTATTAATTATGTTGTTATTTTTGTTTTGGATGATTTGACTCACAGTACTTCTTTGTCTATGTACTTGCAATATATGATGTGATTGATATAAATATGAATTGATTTCGTGGAGGAATTCCTTACAGTTTAATTGTGTCGAATCTGCTATTCTCTATATCATGATTTTATACTTTATTTTTCTTTTGAATTCTACTCTCATTGGGCATACTACGCATACATCCTTCACCTGTTGATGCAAACAATCTGTATAAATATTGAATCTTGCTTTAAATTATACAAACTAAAGCCAAAGAAATAAAAAATTAGCAAAGGAAACACTAGTCAACTACAGTAAAAGAAGGTTTGAGTAGCCGCAATTCAGCATAGAAGGTCTTCACAACTTGACTGCTAGGATTTCCCAATTGATCAGAAGCTTCTAGCCAGACCAGCCCATCACCTCAGTACGAACAGAATAGTAGCTCAATCCCTGCCACCCTCTTCAACCTGAACTAGCTTTTTGTAGATGGAGCACTGACCTCCTGCAGACCAGGAACTCAGGAAGGCCAACTGCAGAAAAGGCAAAACAAGCAGGATAACAGCTCCAACAGAAAACAACCATTTGCTTCTTCAGCCAACAAACACTTATGCAAACTGCAGTCAGTAGTCTCTGTAACCAAACAGGTCAGCCCCAAACAGTCGGCAGAAAAAGCCACCAGCAGTCAATTTTTGCCACCTGCAGCCTGCATCAGTCAGCAACAGACCCCAAGCAATTTCAGCAGTAACTCTGCCACAGCAACAGAAAACTGTAGAACATAACCAACACACCATAAGTCAACATAGGCCAACTCTTGTCAATAAACCAGTTGCCAACTGTCAGCATCTGTTGGAAACTTGGAATGGATTTTGCAGCCAGTTTCCATCTTCAGGTGTCCATTTCTCATTCTGTTTTCCTTGAACTTTCCAGCACATCTCATGTTGAATTGACTTGACAAGTTGATATGGATGCATCACAGCCTGATTCCAGAAGGTATTATTTCGTGCTCGTCAGATAGGTAAACCGATGCTGATAATGCCGCAAAGAAACATTTTTTCTGAAGTTTGGGACCAGCATTCCTACCCCACTTCTTCCAACAGAAATGAAGCACATCCTCACCCCTAGATCTGAAACCAGCCAATTACATAATCTCCTATAGCATGTATCACTATAGATGCACCTAAACAACAAATGCTAAACACTGCACATCTACAGAATAAACAACTTCCATCCGTTATAAACTCACAGCCACCAACTTGTCCCTTGTTCTAAGCTTACCAAGGGCAGCCGTCCATGAAATGAGTTAGTGTTTACTGTTTAGACACGTTGTATCTGTTCCAGAACCAGACACTCCAAGGGACTTTGATTTCTTCCCCATTGACCCATCTATACACTGCAGAAATAGAATATATCCTATTCACATGGTCCCATCCTTCTTGCACAAACCCAGGTTTTAAGACATCTCTACTCTTGCATACACCCTTCCAGCTCCGCTGTTATCTCTTGGGTGGGACATGTTCCCACCAACTCTGTTTTTTACTGTAAACGAAAACCCATAGATTGTTAGCTTTCAAAGAAATCTGCCAAACGTACTCGCCCTGTGCAGCTAAATATTCAACTTAAAATACCGTTATTTTTGCACTGGTGTATACACTCTTAGATAGTATACATAAGTATGTGTTCATGAATTGTTTTCTAGGAGATGGTTTTCAGTGCATAACCAGCAAGGCTGCTGCTGTGCTTTATTTTACTATCTTGTTTGAGGGATGTTTTATAACAGCTGGAAGCTAGGGGGTAAAGGTTATGCTTGCATGAATTCATGAGATGTCTACAGGTCGCTCAATAGTCAATAATTCGTGGGAACTTTCATTTTATTTGCAGAGTTACGTTGCAGATAAATATTTGCATTTGCATTATCATAGAATTTGGAATACCTGGAGGCACATGATGAAGCATATATTAATATCGCCGATGTTTTTCATTGACTATATTTCCTTAGATTGAGTGAATTGAAGGAACGTGACTTTATGGAGTGTAGATATTCTGGGCTCCAGTTTTTATTTGCAATGCTGTTATTGTCTCTGTTGTATTCTTCCTTTGTTTAATATATATCCAATTATATATGGAAGATGAAGTATTCCTGTATACTTGCCTTGATCACTATTGTTATCATGAGTGATGTCTTATCCTGTTCTTACATTCTAGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGTAATTATCTTGTTTTGTGAAGCATGTAGTTTATGGTTATTTTACTGCGTTCACTTCAGATCTTTCTTGTTCCTTCATTATTATAACTCATAGTTGATGTATGGTGTGCAACAACTTTTGAAGTGTTTTTTTTGGGTTGCCCATCAATTGATTACACCATTAAGAAACACGACATTCTTACGGAAAATGGTGACCAAACCTATTCAACTGTTTTGTGAGAAGTGGACTGTTATTTGCCTCTATTCTTCTTTCTAGCTCCAATGTGTTACTTAAACGTATTCCTCAAAGGCTGTAGTGCTGTACTGATCTCAAATTTAAAAAATCAATTTTGAGTTGTAACTTTGATGTTCGTCTGTCCCAGGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAAAAAATTTAGGTTTCTTCCCATTAAGTTTTTCTGTGTGCGGTTTTATGTAGTTATGTTGGTTTGTTCAATTTCAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTAAGTAGTACTACTTTTCAGTTTTCAAAACTCTAAAGGCTGTTATGTTTTATTGTCTTGAATGTTGTGAGTCGAAAGGTGTTCAAGTGCTTATAGAAGACACGATCTTATTCGAATGAGAATTGTGCAGAACATGATTTAACCCACTTGTCCTGTGAGGAAGTTGGGACTTTAGCAATCTGAGTATTGTCTTTGCCTCTTTGGATCTACGTGCTTATTGAATTTGAATTGAACTCTTGTTATTTATTCAAACCACTTGCAGAAAAGCTATTTACTGCCTTCCGTTAACGGTAGATAAACACTGTTACCCCCATTTAATAATTTCTGGTTCCTGTTGTTTAGCTATTGGTGAATTTTCCTTTCTCGATTCTCTGGCTAAATGTGTTTTCCTTCAAGTTATTGTTATAATATTGCGTGTCAGTACTTTTCGTGTAATGTTTATTCTGGTTAATGTTTTGAGACTTCTATGCTCTGCTAGTCTTTGGAAGGATGCACTAAACTGAGGGACTTTTTTTGTTGCTCGTTTTTTTTATCATTTGTTGAAAATGGATCTCATATTGGAAATTTTATTTAGAACTTAGAAGCACATCCACATGACTGAAGTTTTCGATTAGATTGCTGGAAATGGTTGGTATATGTTTGGAACTGCCCGAACCCTTCGAATCAACAAAAAGAAAAAGAAACAGAAAAGTCCGTTATCAGAACCCCTTGACATACCAGACTCATTTCCACCATTGCCTCCCTTTCCCTGTGCTTCTTCCCAGTTACTGCCTCTTCTCCACCTCCCTTCTCCAACAATCGACACTCCTCCCCCTCCCATGATGACCTTCTCTCCTTCCCCCACAATTCTTCGTTTTGTGCTCTCGTCATCCACTCATCCTCACTACTTCCTCCTGCTTCTTATCTCCCTTAGCCTCTCCTCCTGCCATGGAACCCAGCAATAATAATAATAAAACACGAGAAATCATACTTTCCGATCTTCAACCTATTACTCCTACAAGTTGCTTTTAATACAACAGAGTTACATACAAATTTTGGTGGTGAAAACTCAACAACCCAAGTATGTTTTAGAGAGGGAGGGAAGAATGGTAATTTGGTCAACTGAACAGGAAACATTTGAAATCAAGTATTATTTTGTACTTCCGAGGCATCATCGTTTCCAAAACCATGGTTTTGATCTTTTATCTCATAATTGGTATTTGTTACCAGATGGTAATTTGGTTAGGTTCGAGTACAGTTGAACTAATATAGTACGAAGAACAAGATTTGCTTTGTTTTGCTTGTTCAATGAACTAATGACCCGTTTGGTAGGTTGTAATAATGGTGGTAATGTCAATGTGAATGAATTTATATTGTAAAATTGTGAGAAAACTCATATACCAATGCCCAAGGTAATGCTAATTCACCTAAAGTATCTCATTTTCTTCATAAATCTTCATTATCATCCTTTACCACTTGGATGGTGGTATTGGGCGGGAATGAAAATCTATGAAGAAAAATACAATCTAGGGATGAGATTGCATTACCATGGACTCAGATTCATTTCCATCTGCAATTTATTGGCGGCTACCAAAAGGATCATAAGTGCGCATAGTACTTCAGATTTGAAAAGTATGCTTGCCTTGGAATGGATTTAGACTTTGACCTTCTTATATGGCCTGTGGAGAACCAACCTTGGGTTGTTGAAATCCTAACTGACTACAGATGTGCAATTTGATGCTTCTACATAATTTAGTTTCGAGAGTGGAATGAGTTATTACACTAAGGAGTTGACATCCTCTTTTCATCACTTAATTTTATTAGTAGCATGTTAGAAAATCTTATGATAAACCATTGCTGTATTAGGAAAGATGACTAAATAGTTCCAGCAGTAGATTATATTATATTGAAATACTGTATCCTTTCTGCTGGCGTCTATCTTCTGTGACACAAATTGCTCTCATTTTCTGCCATTTAGGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGTCAGAAATTAATCATATCATATGCACAAGGCAGCTTGAAATTGCATATTTTTTTTTTTACTCCGTGTAATTGTTGTTTGAAACAAAACCTTGTTTTGCAATTGCAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGAAACAATTTTGATTGCTGATAACAATGCAACAATTTTCAACATTGAGTTGCTACAACCTTTGATTTTTAAGTTCATTGCTTCACTCAGAGGCTTCAAACTTTGATGTTTGCCTTGTCGATGAAGCTTGTCTTTCAAAAGCACTCAAGTTATGTTTAGTTAATCGCTTCATGTTCATTCCCCGCCTTTTGGGTTTATAGATTTTAGACGGTCTTTCCATTCATAATAGTATTTGCTAACTTACTACATATAACAAAACTATGTATCCTTGAGTTTTAATTTACTTTTGTTGCACAATTTGGGATTTTTTTTTCATACTTTTATGTATCCTCACTATGAAAATAACATAATTGTATGTCAAAAAAAAAGAGTTAAATATATAATTTCCTGCATAGTAATTGTGATT

mRNA sequence

GATAAATAATAAAATATTAATCGTTAATAAGTTCAGACTGGGCTCTACTCTCTAAGCCCAGCCCATTAGTACCCATCTTCACTAAGCTCTAAGTCTTCCCCACTAAAACCCTCTTCGGCTCTTTCTGCAAATTTCTTCCCTTCGTTAATCACATCTTCCTCCTTTCTTCGAAATCAGCCATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGAAACAATTTTGATTGCTGATAACAATGCAACAATTTTCAACATTGAGTTGCTACAACCTTTGATTTTTAAGTTCATTGCTTCACTCAGAGGCTTCAAACTTTGATGTTTGCCTTGTCGATGAAGCTTGTCTTTCAAAAGCACTCAAGTTATGTTTAGTTAATCGCTTCATGTTCATTCCCCGCCTTTTGGGTTTATAGATTTTAGACGGTCTTTCCATTCATAATAGTATTTGCTAACTTACTACATATAACAAAACTATGTATCCTTGAGTTTTAATTTACTTTTGTTGCACAATTTGGGATTTTTTTTTCATACTTTTATGTATCCTCACTATGAAAATAACATAATTGTATGTCAAAAAAAAAGAGTTAAATATATAATTTCCTGCATAGTAATTGTGATT

Coding sequence (CDS)

ATGAATCTTTCAAGAGGAGCTCAGAAATTGAATCAATTGCTTCAATCAACCAACGCAAGAAGCATCCAAACTCTTTCACCCTTTCTTCGTGATTCGCTACGCCATTTCTCAACTGGAACTGAACATCAAGTTCAACCTCAACCTCCACAATCTTCAACCCAGCATGCTCCTTCTCTTCAACCACCTTCTTCTGGTTTGGTCTATGGGAGGCTGCTCGGCATCTCATCAAACACATTGAAGACTGATATCATCAATTTGTTTGAAGGATGCAAGTTGACATTGGATGACATTAAGGTTGATTACGACAGGGCATATAACCCAATGGCAATGCTGGTGCAATTCAGCTCTATGTCTCATTTTGGTTCTGCCATCCGAGAGCTTACTAGGAAGAGCCGACCCTTCAGATTGGAGAAGGTAGTAGATCATCAAAAATGGGATTCTGTAACACCTCATAATGGAAGATATGTATTATTTACAGGAATACCCCGCAATGCACTTTTGGAGGATGTGGAACGCTTTCTGTGTGGCTGTAACTATGAAGCTTCCTCCCTTGACTTATTTTTTACTAGGACGGTAGATGGCCCTTCAAGGATAGCTAAAGTGCGTTTTCCTTCACCAATTGAGGCAATGAATGCAGTACTCAAGAAGAATGGGTCCTTTTGTCTGAATGGTCGAGTTGCAGCTCAACTTATCCAGTGA

Protein sequence

MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17769	Spo17769	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17769.1	Spo17769.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17769.1.utr5p.1	Spo17769.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17769.1.CDS.6	Spo17769.1.CDS.6	CDS
Spo17769.1.CDS.5	Spo17769.1.CDS.5	CDS
Spo17769.1.CDS.4	Spo17769.1.CDS.4	CDS
Spo17769.1.CDS.3	Spo17769.1.CDS.3	CDS
Spo17769.1.CDS.2	Spo17769.1.CDS.2	CDS
Spo17769.1.CDS.1	Spo17769.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17769.1.utr3p.1	Spo17769.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17769.1.exon.6	Spo17769.1.exon.6	exon
Spo17769.1.exon.5	Spo17769.1.exon.5	exon
Spo17769.1.exon.4	Spo17769.1.exon.4	exon
Spo17769.1.exon.3	Spo17769.1.exon.3	exon
Spo17769.1.exon.2	Spo17769.1.exon.2	exon
Spo17769.1.exon.1	Spo17769.1.exon.1	exon

Homology

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BLAST of Spo17769.1 vs. NCBI nr
Match: gi|902210895|gb|KNA16571.1| (hypothetical protein SOVF_087620 [Spinacia oleracea])

HSP 1 Score: 466.5 bits (1199), Expect = 2.800e-128
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ
Sbjct: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF
Sbjct: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
           GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE
Sbjct: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ
Sbjct: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 232

[Close]

BLAST of Spo17769.1 vs. NCBI nr
Match: gi|731345908|ref|XP_010684169.1| (PREDICTED: uncharacterized protein LOC104898764 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 315.5 bits (807), Expect = 7.900e-83
Identity = 159/229 (69.43%), Postives = 182/229 (79.48%), Query Frame = 1


		  
Query: 4   SRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPS 63
           SRG Q LN LL+STN R+ Q L  FLRDS RHFST  EHQ  PQ P S T     L PPS
Sbjct: 4   SRGIQILNHLLKSTNGRTPQNLPLFLRDSPRHFSTRNEHQPLPQHPHSPTPIDSFLHPPS 63

Query: 64  SGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSA 123
            GLVYGRL GIS+NTLKTDIINLFEG  LTLDDIKV+Y+R ++PMAMLVQF SM+ F +A
Sbjct: 64  PGLVYGRLFGISANTLKTDIINLFEGSNLTLDDIKVEYNRIFHPMAMLVQFRSMADFSAA 123

Query: 124 IRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASS 183
            RELTR+SR FR+EKVVDH++WD VTP+NGRYVLF GIPRNAL +D++R L GCNYEASS
Sbjct: 124 FRELTRRSRSFRMEKVVDHRQWDLVTPYNGRYVLFQGIPRNALPDDIDRLLSGCNYEASS 183

Query: 184 LDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           L++F      GP R+A VRFPSPIEAMNAV++KNG+FCLN RV AQLIQ
Sbjct: 184 LEIFVRPLQSGPIRMATVRFPSPIEAMNAVIRKNGAFCLNNRVLAQLIQ 232

[Close]

BLAST of Spo17769.1 vs. NCBI nr
Match: gi|694426660|ref|XP_009340998.1| (PREDICTED: uncharacterized protein LOC103933069 [Pyrus x bretschneideri])

HSP 1 Score: 212.6 bits (540), Expect = 7.200e-52
Identity = 111/226 (49.12%), Postives = 148/226 (65.49%), Query Frame = 1


		  
Query: 11  NQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHA----PSLQPPSSGL 70
           + L   T  R  + L   L +  R FST  E+  Q  PP    Q A    P LQ P++GL
Sbjct: 13  SNLAVRTAVRQNRGLPMLLGEPARRFSTEAENPPQNSPPSDQPQDASPIEPFLQTPTTGL 72

Query: 71  VYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRE 130
           VYG+LLGIS  TLKTD++N+ EGC L+L+D+KVDY+RA+ PM M+VQF S   F +A R 
Sbjct: 73  VYGKLLGISRYTLKTDVVNMLEGCNLSLEDVKVDYNRAFTPMGMVVQFRSWKAFDNAARV 132

Query: 131 LTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDL 190
           ++RK R F+LE+  +   WD++TPH+G+ VL  GIP+ A  EDVERFL GC Y++SSL +
Sbjct: 133 ISRKGRLFKLER-ANRSLWDNLTPHDGKTVLLQGIPQTAAPEDVERFLSGCEYDSSSLQI 192

Query: 191 FFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            F R+   PS+ A VRFPS  EAMNA L KN  FC NG++  +++Q
Sbjct: 193 IF-RSFPEPSKFATVRFPSQTEAMNAFLAKNKGFCQNGQILMRVLQ 236

[Close]

BLAST of Spo17769.1 vs. NCBI nr
Match: gi|1009165193|ref|XP_015900911.1| (PREDICTED: uncharacterized protein LOC107434017 [Ziziphus jujuba])

HSP 1 Score: 210.3 bits (534), Expect = 3.600e-51
Identity = 103/207 (49.76%), Postives = 141/207 (68.12%), Query Frame = 1


		  
Query: 26  SPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIIN 85
           S  LR+S R  ST  E+Q    PP  ++     L+ P +GLVYG+L GI+ NTLKTDI+N
Sbjct: 29  SLLLRESPRFISTEAENQPPKDPPVENS----FLETPGTGLVYGKLYGITRNTLKTDIVN 88

Query: 86  LFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKW 145
           L EGC LTL+D+KVDY R++ P+ M+VQF S   +  A R ++R+ R  RLE+  D  +W
Sbjct: 89  LLEGCNLTLEDVKVDYSRSFTPLGMMVQFPSRQAYEQAARVISRRGRLNRLERA-DRSQW 148

Query: 146 DSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPS 205
           D +TP++G+ VL  GIPRNA+ EDVERFL GC Y+ASS+ +F       P ++A +RFPS
Sbjct: 149 DILTPYDGKTVLLQGIPRNAVPEDVERFLSGCQYDASSIQIFLRAAYPDPIKMATIRFPS 208

Query: 206 PIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           P EAMNA + KN +FCLN +V  +++Q
Sbjct: 209 PTEAMNAFITKNRAFCLNSQVTVRVLQ 230

[Close]

BLAST of Spo17769.1 vs. NCBI nr
Match: gi|694421449|ref|XP_009338576.1| (PREDICTED: uncharacterized protein LOC103930898 [Pyrus x bretschneideri])

HSP 1 Score: 208.4 bits (529), Expect = 1.400e-50
Identity = 109/226 (48.23%), Postives = 147/226 (65.04%), Query Frame = 1


		  
Query: 11  NQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHA----PSLQPPSSGL 70
           + L   T  R  + L   L +  R FST  E+  Q  PP    Q A    P LQ P++GL
Sbjct: 13  SNLAVRTAVRQNRGLPMLLGEPARRFSTEAENPPQNSPPSDQPQDASPIEPFLQTPTTGL 72

Query: 71  VYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRE 130
           VYG+LLGIS  TLKTD++N+ EGC L+L+D+KVDY+RA+ PM M+VQF S   F +A R 
Sbjct: 73  VYGKLLGISRYTLKTDVVNMLEGCNLSLEDVKVDYNRAFTPMGMVVQFRSWKAFDNAARV 132

Query: 131 LTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDL 190
           ++RK R F+LE+  +   WD++TPH+G+ VL  GIP+ A  EDVERFL GC Y++SSL +
Sbjct: 133 ISRKGRLFKLER-ANRSLWDNLTPHDGKTVLLQGIPQTAAPEDVERFLSGCEYDSSSLQI 192

Query: 191 FFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            F R+   PS+ A +RF S  EAMNA L KN  FC NG++  +++Q
Sbjct: 193 IF-RSFPEPSKFATIRFLSQTEAMNAFLAKNKGFCQNGQILMRVLQ 236

[Close]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087620 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.900e-128
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ
Sbjct: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF
Sbjct: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
           GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE
Sbjct: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ
Sbjct: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 232

[Close]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1H8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162420 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.500e-83
Identity = 159/229 (69.43%), Postives = 182/229 (79.48%), Query Frame = 1


		  
Query: 4   SRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQPPS 63
           SRG Q LN LL+STN R+ Q L  FLRDS RHFST  EHQ  PQ P S T     L PPS
Sbjct: 4   SRGIQILNHLLKSTNGRTPQNLPLFLRDSPRHFSTRNEHQPLPQHPHSPTPIDSFLHPPS 63

Query: 64  SGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSA 123
            GLVYGRL GIS+NTLKTDIINLFEG  LTLDDIKV+Y+R ++PMAMLVQF SM+ F +A
Sbjct: 64  PGLVYGRLFGISANTLKTDIINLFEGSNLTLDDIKVEYNRIFHPMAMLVQFRSMADFSAA 123

Query: 124 IRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASS 183
            RELTR+SR FR+EKVVDH++WD VTP+NGRYVLF GIPRNAL +D++R L GCNYEASS
Sbjct: 124 FRELTRRSRSFRMEKVVDHRQWDLVTPYNGRYVLFQGIPRNALPDDIDRLLSGCNYEASS 183

Query: 184 LDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           L++F      GP R+A VRFPSPIEAMNAV++KNG+FCLN RV AQLIQ
Sbjct: 184 LEIFVRPLQSGPIRMATVRFPSPIEAMNAVIRKNGAFCLNNRVLAQLIQ 232

[Close]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: V4S491_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012666mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.600e-48
Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1


		  
Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           M+L R A K +  L++   + I +L   LR S +HFST TE    P PP +       LQ
Sbjct: 1   MSLLRNAIKSSVSLRTI--KPIHSLPSLLRQSPKHFSTETE--APPPPPPNDASIDLFLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
            P+ G+ YG+LLGIS  TLK+DIINL EGC LT DD+KV+Y R Y P AM++QF S S +
Sbjct: 61  TPTKGVFYGKLLGISRQTLKSDIINLLEGCNLTPDDLKVNYTRNYMPFAMMMQFPSFSAY 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
            +A R + RK R +RLE+  +  +WD V P+NG+ VL   +PR A+ EDVERFL GC YE
Sbjct: 121 DNAFRLIGRKGRLYRLER-AEQSEWDIVMPYNGKTVLLQNVPRIAVAEDVERFLSGCEYE 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           ASS+     +++    + A VRFPS  +AM+A ++KN  FCLN +V+ +++Q
Sbjct: 181 ASSISFMLRQSLPDSIKWATVRFPSQTQAMDAFIRKNRGFCLNNQVSVRVLQ 227

[Close]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: W1NK87_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00023p00176440 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.200e-47
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 1


		  
Query: 27  PFLRDS-LRHFSTGTEHQVQPQPPQSSTQHAPSLQPPSSGLVYGRLLGISSNTLKTDIIN 86
           P L D   R F T    Q Q Q   +S+   P LQPP  GL YGRL G   N LKTD+I+
Sbjct: 26  PLLPDGRCRAFCTAGSEQQQQQEEGASSPVDPFLQPPPKGLTYGRLTGFGRNALKTDLIH 85

Query: 87  LFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHFGSAIRELTRKSRPFRLEKVVDHQKW 146
            F+GC LT++DIKV+Y+R + P+ ML+QF S S F +A R + R+ R +RL+K VD  +W
Sbjct: 86  FFDGCNLTVEDIKVEYNRTFVPLGMLLQFPSRSAFDTATRLVFRRGRLYRLDK-VDRGQW 145

Query: 147 DSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYEASSLDLFFTRTVDGPSRIAKVRFPS 206
           D VTP++G+ +LF GIPR A  EDVERFL GC Y+ S L L        P R+A VRFP+
Sbjct: 146 DIVTPYDGKVLLFQGIPRQAFPEDVERFLSGCRYDGSDLQLLMRPGFPDPIRLALVRFPT 205

Query: 207 PIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
            ++AMNA+  KN  FC+N  + A+++Q
Sbjct: 206 QLDAMNALRMKNRGFCINSPITARILQ 231

[Close]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Match: D7TQC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02910 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.200e-46
Identity = 107/231 (46.32%), Postives = 149/231 (64.50%), Query Frame = 1


		  
Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           MN    A + N+LLQ+  A+  Q L P L   +R FST  E       PQ S+   P LQ
Sbjct: 1   MNPVANANRWNRLLQT--AKPSQGL-PLL---IRSFSTEAE------APQVSSSD-PFLQ 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYNPMAMLVQFSSMSHF 120
           PPS+GLVYGRL GI+ +TL+TDI+NL EGC LTL D+KVDY+R+Y P+ M+VQF S   F
Sbjct: 61  PPSTGLVYGRLSGITKHTLRTDILNLLEGCNLTLQDVKVDYNRSYFPVGMMVQFPSRYAF 120

Query: 121 GSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCNYE 180
             AI+ + +K R ++L++  D  +WD +  ++G+ VL  G+PRNAL EDVERFL GC + 
Sbjct: 121 DHAIKVINKKGRLYKLDR-ADRSQWDPLRTYDGKTVLLQGLPRNALPEDVERFLAGCEFN 180

Query: 181 ASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLI 232
           +S++ L   +    P R+A V FPS  +AMNA + KN  FCLN ++  +++
Sbjct: 181 SSNIQLTTRQAFPDPIRMALVHFPSQSQAMNAFITKNRGFCLNNQILVRVL 217

[Close]

BLAST of Spo17769.1 vs. TAIR (Arabidopsis)
Match: AT5G02740.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 165.6 bits (418), Expect = 3.600e-41
Identity = 90/234 (38.46%), Postives = 134/234 (57.26%), Query Frame = 1


		  
Query: 1   MNLSRGAQKLNQLLQSTNARSIQTLSPFLRDSLRHFSTGTEHQVQPQPPQSSTQHAPSLQ 60
           M+++R A + +  L+  +    ++  PFL++  +  ST TE     QPP +S    P   
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLPFLQEWRKCLSTATE-----QPPPASPLPPPPGG 60

Query: 61  PPSSGLVYGRLLGISSNTLKTDIINLFEGCKLTLDDIKVDYDRAYN--PMAMLVQFSSMS 120
            P  G  YG+  G S + LKTDI+N+ EGC LT DD+K +Y R  N  P A+ VQF S+S
Sbjct: 61  SPGEGRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLS 120

Query: 121 HFGSAIRELTRKSRPFRLEKVVDHQKWDSVTPHNGRYVLFTGIPRNALLEDVERFLCGCN 180
            +  A+R + +K + +RLEK    Q WD + P+ G+ V   GIP NA+ +D++RFL GC 
Sbjct: 121 AYDKALRNIAKKGKLYRLEKAARAQ-WDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCL 180

Query: 181 YEASSLDLFFTRTVDGPSRIAKVRFPSPIEAMNAVLKKNGSFCLNGRVAAQLIQ 233
           Y   S+     + +    R+A VRF S  +AMNA + KN +F LN R+  Q++Q
Sbjct: 181 YYPGSIQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228

The following BLAST results are available for this feature:

BLAST of Spo17769.1 vs. NCBI nr
BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
BLAST of Spo17769.1 vs. ExPASy Swiss-Prot
BLAST of Spo17769.1 vs. TAIR (Arabidopsis)

BLAST of Spo17769.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210895\|gb\|KNA16571.1\|	2.8e-128	100.	hypothetical protein SOVF_0876...	[more]
gi\|731345908\|ref\|XP_010684169.1\|	7.9e-83	69.4	PREDICTED: uncharacterized pro...	[more]
gi\|694426660\|ref\|XP_009340998.1\|	7.2e-52	49.1	PREDICTED: uncharacterized pro...	[more]
gi\|1009165193\|ref\|XP_015900911.1\|	3.6e-51	49.7	PREDICTED: uncharacterized pro...	[more]
gi\|694421449\|ref\|XP_009338576.1\|	1.4e-50	48.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17769.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RAQ4_SPIOL	1.9e-128	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C1H8_BETVU	5.5e-83	69.4	Uncharacterized protein OS=Bet...	[more]
V4S491_9ROSI	2.6e-48	46.5	Uncharacterized protein OS=Cit...	[more]
W1NK87_AMBTC	2.2e-47	48.3	Uncharacterized protein OS=Amb...	[more]
D7TQC4_VITVI	9.2e-46	46.3	Putative uncharacterized prote...	[more]

BLAST of Spo17769.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17769.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G02740.1	3.6e-41	38.4	Ribosomal protein S24e family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 147..226 score: 8.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000166	nucleotide binding