Spo17926.1 (mRNA) | SpinachBase

Overview


Name	Spo17926.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)
Location	chr2 : 19182520 .. 19183272 (+)
Sequence length	408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGGCTGAGTCGATGACCTACGTATAAAATAAGAAACATTTTTGGATTTGAATAAAAAAAAACAACTTTGCTGACAATTACTTATATATTTTTTTTTTGTTTGGGTCAGAAGAGTTCTCCGAATATTCTAATCTTGATTAGTGATGGGTTTCCATTTTTTGTTGACTATGAACAGAGAAGAGAGGATAAGTTCATTACATTCAAAAAAGATATGGAAATTTGCCATAAAAAATTGAAGTAATTGAGCGTGAGTGCCAAATGAATTGAAAAATTCACGTTTGGTTCGGGAAGGGATCATGAATGTTTTGAAATGAATGGAAAGATAATCTACTTTCATTAAGTGATTTATTAGATAATTGAAAACAGAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

mRNA sequence

ATGGCAAAGGCTGAGTCGATGACCTACAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

Coding sequence (CDS)

ATGGCAAAGGCTGAGTCGATGACCTACAGGATCTTGAATACTATTCGAAATTTAGAAGAACTACGCAGAAAGGCCATTGAACAACTGGAAAAAGCCCGGGCTCGCTTAAAGAAAGTCGAAATGGACGCGGATCAGTTTCGAGTGAATGGATATTCTGAAATAGAACGAGAAAAGATGAATTTGATTAATTCAACTTATAAAACTTTAGAACAATTTGAAAATTACAAAAACGAAACCATTCAGTTTGAACAACAAAAAGCGATTAATCAAGTCCTACAGCGGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGAACAATGAGTTACATTTACGGACCATCAATGCTAATATTGGCATGTTTGGTGCGATGAACGAAATAACTGATTAG

Protein sequence

MAKAESMTYRILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTLEQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGAMNEITD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17926	Spo17926	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17926.1	Spo17926.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17926.1.exon.1	Spo17926.1.exon.1	exon
Spo17926.1.exon.2	Spo17926.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17926.1.CDS.1	Spo17926.1.CDS.1	CDS
Spo17926.1.CDS.2	Spo17926.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo17926.1 vs. NCBI nr
Match: gi|11497510|ref|NP_054918.1| (ATP synthase CF0 B subunit [Spinacia oleracea])

HSP 1 Score: 230.3 bits (586), Expect = 2.000e-57
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQFENYKNETIQFEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. NCBI nr
Match: gi|836613816|ref|YP_009143625.1| (ATP synthase CF0 B subunit (chloroplast) [Salicornia brachiata])

HSP 1 Score: 222.6 bits (566), Expect = 4.100e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. NCBI nr
Match: gi|932252319|gb|ALG63275.1| (ATP synthase CF0 B subunit (chloroplast) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 60  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 119

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 120 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 179

Query: 130 MNEITD 136
           MNEITD
Sbjct: 180 MNEITD 185

[Close]

BLAST of Spo17926.1 vs. NCBI nr
Match: gi|628819094|gb|AHY80527.1| (ATP synthase CF0 subunit I (plastid) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. NCBI nr
Match: gi|1020267070|gb|AMZ03421.1| (ATP synthase subunit b (chloroplast) [Bienertia sinuspersici])

HSP 1 Score: 221.5 bits (563), Expect = 9.100e-55
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFR+NGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRINGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V Q+VFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQQVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QX53_9CARY (ATP synthase subunit b, chloroplastic OS=Salicornia brachiata GN=atpF PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXT4_SALEU (ATP synthase subunit b, chloroplastic OS=Salicornia europaea GN=atpF PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-55
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V QRVFQQALQGALGTLNSCLNNELHLRTINAN+GMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQRVFQQALQGALGTLNSCLNNELHLRTINANLGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A0N9LT81_BETVU (ATP synthase subunit b, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=atpF PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.800e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 60  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 119

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 120 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 179

Query: 130 MNEITD 136
           MNEITD
Sbjct: 180 MNEITD 185

[Close]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A023ZR79_BETVU (ATP synthase CF0 subunit I OS=Beta vulgaris subsp. vulgaris GN=atpF PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.800e-55
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST KTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETILFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Match: A0A159ZR88_9CARY (ATP synthase subunit b OS=Bienertia sinuspersici GN=atpF PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.300e-55
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEM+ADQFR+NGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMEADQFRINGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQKAIN+V Q+VFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETINFEQQKAINEVRQQVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_SPIOL (ATP synthase subunit b, chloroplastic OS=Spinacia oleracea GN=atpF PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.200e-59
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR KAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQFENYKNETIQFEQQKAINQV QRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA
Sbjct: 119 EQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           MNEITD
Sbjct: 179 MNEITD 184

[Close]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_EUCGG (ATP synthase subunit b, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpF PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.700e-54
Identity = 112/126 (88.89%), Postives = 119/126 (94.44%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVEM+A+QFRVNGYSEIE+EK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEMEAEQFRVNGYSEIEQEKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCLNNELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184

[Close]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_CARPA (ATP synthase subunit b, chloroplastic OS=Carica papaya GN=atpF PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.900e-53
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVEM+A+QFRVNGYSEIEREK NLINST KTL
Sbjct: 59  RILNTIRNSEELRDGAIEQLEKARARLRKVEMEAEQFRVNGYSEIEREKWNLINSTSKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETIQFEQQ+AINQV QRVFQQALQGA+GTLNSCL+NELHLRTINANIGMFGA
Sbjct: 119 EQLENYKNETIQFEQQRAINQVRQRVFQQALQGAIGTLNSCLSNELHLRTINANIGMFGA 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184

[Close]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_POPTR (ATP synthase subunit b, chloroplastic OS=Populus trichocarpa GN=atpF PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.000e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVE++ADQFRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCL NELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EIT+
Sbjct: 179 MKEITN 184

[Close]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Match: ATPF_POPAL (ATP synthase subunit b, chloroplastic OS=Populus alba GN=atpF PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.000e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AIEQLEKARARL+KVE++ADQFRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           EQ ENYKNETI FEQQ+AINQV QRVFQQALQGALGTLNSCL NELHLRTI+ANIGMFGA
Sbjct: 119 EQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGMFGA 178

Query: 130 MNEITD 136
           M EIT+
Sbjct: 179 MKEITN 184

[Close]

BLAST of Spo17926.1 vs. TAIR (Arabidopsis)
Match: ATCG00130.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast)

HSP 1 Score: 198.7 bits (504), Expect = 2.200e-51
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 1


		  
Query: 10  RILNTIRNLEELRRKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTL 69
           RILNTIRN EELR  AI+QLE ARARL+ VE +AD+FRVNGYSEIEREK+NLINSTYKTL
Sbjct: 59  RILNTIRNSEELREGAIQQLENARARLRNVETEADKFRVNGYSEIEREKLNLINSTYKTL 118

Query: 70  EQFENYKNETIQFEQQKAINQVLQRVFQQALQGALGTLNSCLNNELHLRTINANIGMFGA 129
           +Q ENYKNETI FEQQ+ INQV +RVFQQALQGA+GTLNSCL+NELHLRTINANIGMFG 
Sbjct: 119 KQLENYKNETILFEQQRTINQVRERVFQQALQGAIGTLNSCLSNELHLRTINANIGMFGT 178

Query: 130 MNEITD 136
           M EITD
Sbjct: 179 MKEITD 184

The following BLAST results are available for this feature:

BLAST of Spo17926.1 vs. NCBI nr
BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
BLAST of Spo17926.1 vs. TAIR (Arabidopsis)

BLAST of Spo17926.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|11497510\|ref\|NP_054918.1\|	2.0e-57	97.6	ATP synthase CF0 B subunit [Sp...	[more]
gi\|836613816\|ref\|YP_009143625.1\|	4.1e-55	93.6	ATP synthase CF0 B subunit (ch...	[more]
gi\|932252319\|gb\|ALG63275.1\|	6.9e-55	95.2	ATP synthase CF0 B subunit (ch...	[more]
gi\|628819094\|gb\|AHY80527.1\|	6.9e-55	95.2	ATP synthase CF0 subunit I (pl...	[more]
gi\|1020267070\|gb\|AMZ03421.1\|	9.1e-55	92.8	ATP synthase subunit b (chloro...	[more]

BLAST of Spo17926.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0G2QX53_9CARY	2.8e-55	93.6	ATP synthase subunit b, chloro...	[more]
A0A0G2QXT4_SALEU	2.8e-55	93.6	ATP synthase subunit b, chloro...	[more]
A0A0N9LT81_BETVU	4.8e-55	95.2	ATP synthase subunit b, chloro...	[more]
A0A023ZR79_BETVU	4.8e-55	95.2	ATP synthase CF0 subunit I OS=...	[more]
A0A159ZR88_9CARY	6.3e-55	92.8	ATP synthase subunit b OS=Bien...	[more]

BLAST of Spo17926.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATPF_SPIOL	1.2e-59	97.6	ATP synthase subunit b, chloro...	[more]
ATPF_EUCGG	7.7e-54	88.8	ATP synthase subunit b, chloro...	[more]
ATPF_CARPA	2.9e-53	88.8	ATP synthase subunit b, chloro...	[more]
ATPF_POPTR	5.0e-53	88.1	ATP synthase subunit b, chloro...	[more]
ATPF_POPAL	5.0e-53	88.1	ATP synthase subunit b, chloro...	[more]

BLAST of Spo17926.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
ATCG00130.1	2.2e-51	82.5	ATPase, F0 complex, subunit B/...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002146	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	PFAM	PF00430	ATP-synt_B	coord: 10..107 score: 2.3
None	No IPR available	unknown	Coil	Coil	coord: 11..49 scor
None	No IPR available	PANTHER	PTHR34264	FAMILY NOT NAMED	coord: 10..134 score: 1.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism