Spo17932.1 (mRNA) | SpinachBase

Overview


Name	Spo17932.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	50S ribosomal protein L14, chloroplastic
Location	chr2 : 19143311 .. 19147631 (-)
Sequence length	618

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAAGATGATGAAGTACAATATTTGAATGAAATAGTAGATTGTGTATCACGTATATAGCTTTTATTTTTTATTTTTTATTAATTAATAATAATAATTTTTTATTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTGACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGAAAAATGGGCTGAAATTATGAATGCTTTCTTAACTTGGCGTAAGATAAAAAATCTAGAATATTTTTTTCTACGGCATACCTTAATCTCATCAGAACGCCCACTCGGGTCAAAACAGACGTATACAGAACAACCAAAAGGGAAAACTTTTTATGCCTACAAATAATAGGTCTTTAAATGGAAATCCATTCAATTCCGTAACAAAAAAAATAGTATTTTTTTTGTCCAGTAAGTATTTGTAATTGATATATAAAATACAAATACTTAATGTAAATTTTTTATGTTATCTCTTTTTCAGTAATACTTTCTTTTGTTCGCTTTAATGATCAAATAATTGGATTTATTATAATTTATAACGATAATTATCCAAACTCTTTTGTGTTTTGCCACCCATTTTTATCATCACATTCAGGCCTTCAATTCTTTTTTTGTGCTATGATTAACTTGTGCAATTTTTAAAAATATTTTCTATTTTGGTAGAAAGTGAGTTCTTTCATCTTGAAATCGAAATAATATCACTTAATTGAAAAATGAAGTGGTTCTGCCGCGTATTCATTAACAATTTATAGATGAAAAAAAAAATGGAAAAAAAGAAAGTATTTATTCCTTTTCTATATCTTATATCTATAGTATTTTTACCCTGGTGGATCTATCTATCATTTCAAAAAAGTCTGGAATCTTGGGTTACTACTTGGTGGAATACTAAGCAATCTGAAACTTTTTTGAATGATATTCAAGAAAAAAAGCTTCTCGAAAAATTCATCGAATTAGAGGAGCTCCGCTTGTTGGACGAAATGATAAAGGAATATCCAGAAACACAGTTACAAAAACTCGGTATAGGAATCCACAATGAAACGATTCAATTGATCAAGATGCACAATGAGGATTGTATCCATATGATTTTGCACTTCTCGACAAATTTAATCTGTTTCCTTATTCTAGGCGGTTATTCCATTCTGGGAAATAAAGAACTTATTCTTCTTAATTCTTGGGTTCAGGAATTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTAGTAACCGATTTATGTATCGGATTTCATTCACCCTAGGGTTGGGAACTACTAATTGAATCTATCTACAAAGATTTTGGATTTGCCGATAACGATCAAATTATATCGAGTCTTGTTTCCACTTTTCCATTCATTCTAGATACAATTTTGAAATATTGGATATTCCGTTCTTTAAATCGTGTATCCCCATCGCTTGTAGTGATTTATCATTCAATGAATGACTGAAAAGAAGAAAAAGGGTATACGGATATAAATCCAATTCAAATTTCTAATTCGAATGTTTGTTGCTTTGTACATAAAAATAATCAAAACATTACAAATTGCACCCCCTCTTTACTATTTCTACCCGTCTCAGGCGGGGAGTTCCTCCGATATTCCAGTAATATTTTTTTATTAAATTCAGTTTTCAGTTAAAGTAAATAGCAGAATCGTGGATAGGGGACTTTACTAGCAACCTACCCAATTTATTGTATAAATTTTCGGAATCAATGGTTGGACTATGCAAACTATAAATACCTTTTCTTGGATAAAAGAACAGATTACTCGATCCATTTCCATATCACTTATATTATATATAATAACTCGGTCATCCATTGCGAATGCCTATCCCATTTTCGCACAGCAAGGTTATGAAAATCCATGAGAGGCGACGGGACGTATTGTATGTGCCAATTGCCATTTAGCTAATAAGCCCGTGGATATTGAGGTTCCACAAGCGGTCCTTCCAGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAATTAAAACAAGTTTTAGCTAACGGTAAAAAGGGTGGCTTGAATGTGGGGGCTGTTCTTATTTTACCTGAGGGATTTGAATTAGCCCCACCCGATCGTATTTCTCCAGAGATGAAAGAAAAAATAGGGAATCTTTCTTTTCAGAGCTATCGCCCAATAAACAAAATATTCTTGTGATAGGTCCTGTTCCTGGGCAAAAATATAGTGAAATTACCTTTCCTATTCTTGCCCCGGACCCTGCCACTAAAAAAGACGTTCACTTCTTAAAATATCCGATATATGTAGGTGGTAACAGGGGAAGGGGTCAAATTTATCCTGACGGAAGCAAGAGTAATAATACAGTTTATAATTCCACAGCAACAAGTATAGTAAAGAAAATTGTACGAAAAGAAAAGGGCGGATACGAAATAAACATAGCGGATGCCTCGGATGGACGTGAAGTGGTTGATATTATCCCTCGAGGACCAGAGCTTCTTGTTTCCGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGGTTTGGTCAGGGAGACGCAGAAGTAGTACTTCAAGACCCACTGCGCATACAAGGTCTTTTATTTTTCTTTGCGTCTGTTATTTTAGCACAAATCTTTTTGGTTCTTAAAAAGAAACAATTCGAGAAGGTTCAATTGTCCGAAATGAATTTCTAGATTCGTGTATTTATCAAGCTTGTAACAATAACAAAATTTTTGTTGACAATTATTTGACAATTTTGGATGATCAATAAATCAAAAAATTCTGAGAAGGTTTTTTTTGTTTGTTTATACTTTTCTTGTATATCTACGAGAAGGTTGGAATTACTTGTACGAGATTATTAGTTATAATATCTATTGGATTGCGAAGAAGACTATTTTCCTTTTTTCCAATCGAAATTCGACTAGATGCTAGACTAAAGGGGAAATGTAACGAAAAGAATAATGAGGGGACCAAATGATTCTAGGGGGAGTTCTTTTCCTTCCTGGTCTTCGACACACGACAAGGAATTTTACACATACTTGTCGTGTGTCGAAATTGTAATGAGTCTTGATTCTCCTCGTCAAAGACTTAGTCGGAATTTTTTCTTAGTATTACACGTATAAGGAGTGGACAAACTGAAAAAAAAGGAGAGAGGTAAATTTTATGGAACAAATGGAACTTCTTGCATTCTAGTTAATCTAGAAAAATAAAGCTTCTATTGTGTCATTCAGTAAATCAAGTGATTACCTCTTTTTTTAACTTAACAATTTAGGAAGGATCAACAAGTACTATCAAGGAANGGGATTTAATGTTAATTTAACTAACAAAGCGAAAAACATCCTAGATCTAGAACCCATACAAAAGTATAGATTAAACGAATACATACATTTGATGCGTGTACTCCCACTAGCCTTATGAACACGAACGAGAACTCCACTTGTAGTTCCTCTACAGTAGTCCATTAACACGTTCAGATCCTCCATGATTCTGGTAGCTTAGATCTTCCACAAGGTATTTGGCTTTTGGGAAAAATCAACTTTGGAGGCACTCAGAGAATTAGGTTCTTTGTGTCTCTAGGGTTAGATGTGTGTAGTATGGAAAACCAAGTGGAGTAGGTTAATCCTTAAGGTTATATCCCAAACTGGCCAAAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

mRNA sequence

ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

Coding sequence (CDS)

ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

Protein sequence

MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEAQGPVTVQLAHKPTRAQLTGVGPWVTCYAIAAIVSSCAPSRKAMGLLLAYRKRCAPAGQAHMRDWLVGLNVTHSSSCLCLMPYCHY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17932	Spo17932	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17932.1	Spo17932.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17932.1.CDS.2	Spo17932.1.CDS.2	CDS
Spo17932.1.CDS.1	Spo17932.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17932.1.exon.2	Spo17932.1.exon.2	exon
Spo17932.1.exon.1	Spo17932.1.exon.1	exon

Homology

[Close]

BLAST of Spo17932.1 vs. NCBI nr
Match: gi|11497563|ref|NP_054971.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 231.5 bits (589), Expect = 1.300e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. NCBI nr
Match: gi|902181471|gb|KNA09754.1| (hypothetical protein SOVF_150420, partial [Spinacia oleracea])

HSP 1 Score: 229.2 bits (583), Expect = 6.600e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. NCBI nr
Match: gi|910354353|ref|YP_009160839.1| (ribosomal protein L14 (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 228.0 bits (580), Expect = 1.500e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. NCBI nr
Match: gi|982898198|ref|YP_009221844.1| (ribosomal protein L14 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 227.3 bits (578), Expect = 2.500e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. NCBI nr
Match: gi|12312|emb|CAA31717.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 226.9 bits (577), Expect = 3.300e-56
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAA-VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAA VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR25_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_150420 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.600e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K9G2_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon persicum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.000e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8A5_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon ammodendron GN=rpl14 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.000e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7W9_MESCR (50S ribosomal protein L14, chloroplastic OS=Mesembryanthemum crystallinum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: H2BC32_9CARY (50S ribosomal protein L14, chloroplastic (Fragment) OS=Didierea madagascariensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_SPIOL (50S ribosomal protein L14, chloroplastic OS=Spinacia oleracea GN=rpl14 PE=1 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 8.300e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119

[Close]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_PLAOC (50S ribosomal protein L14, chloroplastic OS=Platanus occidentalis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLSFTKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQ+HLNV DNSGARELMCIRIIGASNRRYA IGD+IVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQSHLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKEALPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_COFAR (50S ribosomal protein L14, chloroplastic OS=Coffea arabica GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEV+RA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTRIFGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.100e-55
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKEL+RDNGMIIRYDDNAAV+ID EGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 211.8 bits (538), Expect = 3.800e-55
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 1

		  
Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR+NG IIRYDDNAAV+IDQEGNPKGTR+FGAI RELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 120

[Close]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.600e-19
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1

		  
Query: 2   IQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAV 61
           IQ  T L V DNSGA+++MCI+ +    ++ AR+GD IVA +KEA+PN  +++  V+  V
Sbjct: 48  IQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGV 107

Query: 62  VVRTCKELKRDNGMIIRYDDNAAVIIDQ-------EGNPKGTRIFGAIARELR-QKFAKI 118
           VVR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  ELR +K  KI
Sbjct: 108 VVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKI 167

[Close]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1

		  
Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136

[Close]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1

		  
Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136

[Close]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1

		  
Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136

The following BLAST results are available for this feature:

BLAST of Spo17932.1 vs. NCBI nr
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)

BLAST of Spo17932.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|11497563\|ref\|NP_054971.1\|	1.3e-57	99.1	ribosomal protein L14 [Spinaci...	[more]
gi\|902181471\|gb\|KNA09754.1\|	6.6e-57	98.3	hypothetical protein SOVF_1504...	[more]
gi\|910354353\|ref\|YP_009160839.1\|	1.5e-56	96.6	ribosomal protein L14 (chlorop...	[more]
gi\|982898198\|ref\|YP_009221844.1\|	2.5e-56	95.8	ribosomal protein L14 (chlorop...	[more]
gi\|12312\|emb\|CAA31717.1\|	3.3e-56	98.3	ribosomal protein L14 [Spinaci...	[more]

BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QR25_SPIOL	4.6e-57	98.3	Uncharacterized protein (Fragm...	[more]
A0A0K0K9G2_9CARY	1.0e-56	96.6	50S ribosomal protein L14, chl...	[more]
A0A0K0K8A5_9CARY	1.0e-56	96.6	50S ribosomal protein L14, chl...	[more]
A0A0G2R7W9_MESCR	1.7e-56	95.8	50S ribosomal protein L14, chl...	[more]
H2BC32_9CARY	1.7e-56	95.8	50S ribosomal protein L14, chl...	[more]

BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RK14_SPIOL	8.3e-60	99.1	50S ribosomal protein L14, chl...	[more]
RK14_PLAOC	1.2e-55	91.6	50S ribosomal protein L14, chl...	[more]
RK14_EUCGG	1.2e-55	90.8	50S ribosomal protein L14, chl...	[more]
RK14_COFAR	1.2e-55	91.6	50S ribosomal protein L14, chl...	[more]
RK14_CITSI	2.1e-55	90.8	50S ribosomal protein L14, chl...	[more]

BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
ATCG00780.1	3.8e-55	90.0	ribosomal protein L14	[more]
AT5G46160.1	2.6e-19	42.7	Ribosomal protein L14p/L23e fa...	[more]
AT1G04480.1	5.3e-12	34.2	Ribosomal protein L14p/L23e fa...	[more]
AT2G33370.1	5.3e-12	34.2	Ribosomal protein L14p/L23e fa...	[more]
AT3G04400.1	5.3e-12	34.2	Ribosomal protein L14p/L23e fa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	GENE3D	2.40.150.20		coord: 1..119 score: 4.3
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 1..121 score: 24
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 1..121 score: 3.0
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 1..119 score: 1.6
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 1..121 score: 1.4
IPR000218	Ribosomal protein L14P	unknown	SSF50193	Ribosomal protein L14	coord: 1..119 score: 2.88
IPR005745	Ribosomal protein L14P, bacterial-type	TIGRFAMs	TIGR01067	TIGR01067	coord: 1..119 score: 8.3
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 60..86 scor

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding