Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTCCTGTGTAAGCTGGCGGAACTTGGGAAGAAAGAGAAAACATTTTGGCTGGGTCTCGTATGTATTGTGTTAGATGATAGTTGATAATGACACCAGCCGTGTCTTGTTTTATGTGTTAAAATAGTTTTTATCTGGTTCCGGAAAATGCACCTCAGATTTCCTTGCACAGTTCTTGACCTTGTGGCCGCTAGGGGTTCTTTTCATAACACAAACTTACATTCATTCGCATGTGGGCACACACATGAAGGTCTTAAATTTGTAAGATTTGTGAAGCTGTCTTTTCAGAACACAAACTTACATTTGCATGTGGGCACACACACATTAAGGTCTTAAATTTGTAAGATTTGTGAAGCTATCTCAGTTATTTTCTGTCACATCTTTCATTTGCTATGCAGTATGCATGATTGAAAGGTGAAACTGAAAATTCACCAAGGCTTCATCCCTCTCTGCTGCCTGCTTATATTTGTTGTGGAGTATTGGTGACTGATTATTATTCAAAATACTGCAGAATGATTTCAATTTTGAGCAAAGGGATTGGTTTAGTGTTAAGCCCAGCGAATTGCCAGACGGTTCTCGACTGGTGAGAATCTCATGTCTGAGGGTCAGGGGTTTGAATTAATTTCCTTTAATTTCTGCATTATTCATTGAAATTGTGCCTTTTATTCTTATGATATTGGTTAGATCATGGGGCTGAATCCTCCATTTGGATACAAGGCAGCACTGGCTAACAGATTTATCAATAAGGCTCTTCAATTTAATCCAAAGCTTCTCATTTTTATTGTTCCACCAGAAACTAAAAGGTACCTTGACAAGATTTCTCGTCCACTGACACTGACTCCCTCTATATTTTTCCCTATATAAAAAAATGGTTTGTTGTTGTTGTTGTTGTAGGCTTGATTCCAGAAAAGGCACTCGGTATGAATTAATATGGGAGGATCCATATTTACTCGCTGGTGAGGTATGTGCATGGTTTCTAACCTGAATTCTTTCTTAGTTCCTAGTTTGGAGATGGATAATGTATCTGATTGGGGTTTGGTCTCAGGCATTCTACCTTCCTGGATCATGTGATGCTAATGAAAAGCATCTATCACAATGGAACAACGTTACTCCTCCCCTTTATCTCTGGAGTCACCCTGGGTGGACACGAAAGCACAGAGAAATAGCCTACAATTGCGGACAGTCTCAGCTTTTTAATCAACCACAATGCTCTCAACCGCCGCCTGCTTGGAACTATTTACTACAAGAACAGCAAGATTGTTACGGTGATTTCTCCAATGTGATTGATATGTATGGTGGTCTTCCGCGCATGCTCGATGATGTTCCTGAACATAGTCATAACCCAATGGCGTTTAAGGTTGCAGGACATCTGGAAACCATTTCTCCTGTCGATGAACTGGAGGACATGAGTATCTCCCCCACTGATTCTCCAACTGGATTTATCTCTTGACTCGTCTACTAGTAAATTACTCCCATCCCTGTAAAAAGTTAGCAAAAATAGCTCATGGTTGTTTAATAACTATTAAAAAAGTCTGAGGTTTGTCAAGTCTGCTAACGATGCAAACTTATACTACCAAAGTATATCTTCCTGTCTTGTGATGGATAATCATTTTCATAGGGCTACAACTGATGGAGCTCTTCCGAGTTAATTAGTGACTGAAATTTTGTCTGATCATATGGTATTTTCGTAAAAAATTATTTTATTACAAAAATGTCATTAGATTGCTCCTCAAGTAGTGACATGGCCTTAAATGTGGCATTTTGCATTGGTTTAAAAACTAATCCCATGATACCATCCATTTAGAATCGGGTACAAGCTTCGGGTTCTTTATTATTTTTAATTTTAACTCAGCGTAAAGCCG ATGGGCCTCCTGTGTAAGCTGGCGGAACTTGGGAAGAAAGAGAAAACATTTTGGCTGGGTCTCAATGATTTCAATTTTGAGCAAAGGGATTGGTTTAGTGTTAAGCCCAGCGAATTGCCAGACGGTTCTCGACTGATCATGGGGCTGAATCCTCCATTTGGATACAAGGCAGCACTGGCTAACAGATTTATCAATAAGGCTCTTCAATTTAATCCAAAGCTTCTCATTTTTATTGTTCCACCAGAAACTAAAAGGCTTGATTCCAGAAAAGGCACTCGGTATGAATTAATATGGGAGGATCCATATTTACTCGCTGGTGAGGCATTCTACCTTCCTGGATCATGTGATGCTAATGAAAAGCATCTATCACAATGGAACAACGTTACTCCTCCCCTTTATCTCTGGAGTCACCCTGGGTGGACACGAAAGCACAGAGAAATAGCCTACAATTGCGGACAGTCTCAGCTTTTTAATCAACCACAATGCTCTCAACCGCCGCCTGCTTGGAACTATTTACTACAAGAACAGCAAGATTGTTACGGTGATTTCTCCAATGTGATTGATATGTATGGTGGTCTTCCGCGCATGCTCGATGATGTTCCTGAACATAGTCATAACCCAATGGCGTTTAAGGTTGCAGGACATCTGGAAACCATTTCTCCTGTCGATGAACTGGAGGACATGAGTATCTCCCCCACTGATTCTCCAACTGGATTTATCTCTTGACTCGTCTACTAGTAAATTACTCCCATCCCTGTAAAAAGTTAGCAAAAATAGCTCATGGTTGTTTAATAACTATTAAAAAAGTCTGAGGTTTGTCAAGTCTGCTAACGATGCAAACTTATACTACCAAAGTATATCTTCCTGTCTTGTGATGGATAATCATTTTCATAGGGCTACAACTGATGGAGCTCTTCCGAGTTAATTAGTGACTGAAATTTTGTCTGATCATATGGTATTTTCGTAAAAAATTATTTTATTACAAAAATGTCATTAGATTGCTCCTCAAGTAGTGACATGGCCTTAAATGTGGCATTTTGCATTGGTTTAAAAACTAATCCCATGATACCATCCATTTAGAATCGGGTACAAGCTTCGGGTTCTTTATTATTTTTAATTTTAACTCAGCGTAAAGCCG ATGGGCCTCCTGTGTAAGCTGGCGGAACTTGGGAAGAAAGAGAAAACATTTTGGCTGGGTCTCAATGATTTCAATTTTGAGCAAAGGGATTGGTTTAGTGTTAAGCCCAGCGAATTGCCAGACGGTTCTCGACTGATCATGGGGCTGAATCCTCCATTTGGATACAAGGCAGCACTGGCTAACAGATTTATCAATAAGGCTCTTCAATTTAATCCAAAGCTTCTCATTTTTATTGTTCCACCAGAAACTAAAAGGCTTGATTCCAGAAAAGGCACTCGGTATGAATTAATATGGGAGGATCCATATTTACTCGCTGGTGAGGCATTCTACCTTCCTGGATCATGTGATGCTAATGAAAAGCATCTATCACAATGGAACAACGTTACTCCTCCCCTTTATCTCTGGAGTCACCCTGGGTGGACACGAAAGCACAGAGAAATAGCCTACAATTGCGGACAGTCTCAGCTTTTTAATCAACCACAATGCTCTCAACCGCCGCCTGCTTGGAACTATTTACTACAAGAACAGCAAGATTGTTACGGTGATTTCTCCAATGTGATTGATATGTATGGTGGTCTTCCGCGCATGCTCGATGATGTTCCTGAACATAGTCATAACCCAATGGCGTTTAAGGTTGCAGGACATCTGGAAACCATTTCTCCTGTCGATGAACTGGAGGACATGAGTATCTCCCCCACTGATTCTCCAACTGGATTTATCTCTTGA MGLLCKLAELGKKEKTFWLGLNDFNFEQRDWFSVKPSELPDGSRLIMGLNPPFGYKAALANRFINKALQFNPKLLIFIVPPETKRLDSRKGTRYELIWEDPYLLAGEAFYLPGSCDANEKHLSQWNNVTPPLYLWSHPGWTRKHREIAYNCGQSQLFNQPQCSQPPPAWNYLLQEQQDCYGDFSNVIDMYGGLPRMLDDVPEHSHNPMAFKVAGHLETISPVDELEDMSISPTDSPTGFIS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo17981.1 vs. NCBI nr
Match: gi|902236797|gb|KNA24543.1| (hypothetical protein SOVF_014710 [Spinacia oleracea]) HSP 1 Score: 484.6 bits (1246), Expect = 1.000e-133 Identity = 225/240 (93.75%), Postives = 228/240 (95.00%), Query Frame = 1
BLAST of Spo17981.1 vs. NCBI nr
Match: gi|731363662|ref|XP_010693547.1| (PREDICTED: uncharacterized protein LOC104906483 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 293.5 bits (750), Expect = 3.400e-76 Identity = 132/181 (72.93%), Postives = 148/181 (81.77%), Query Frame = 1
BLAST of Spo17981.1 vs. NCBI nr
Match: gi|848859857|ref|XP_012830800.1| (PREDICTED: protein ENHANCED DOWNY MILDEW 2-like isoform X2 [Erythranthe guttata]) HSP 1 Score: 228.8 bits (582), Expect = 1.000e-56 Identity = 106/183 (57.92%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo17981.1 vs. NCBI nr
Match: gi|848859861|ref|XP_012830802.1| (PREDICTED: protein ENHANCED DOWNY MILDEW 2-like isoform X3 [Erythranthe guttata]) HSP 1 Score: 228.8 bits (582), Expect = 1.000e-56 Identity = 106/183 (57.92%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo17981.1 vs. NCBI nr
Match: gi|848859852|ref|XP_012830798.1| (PREDICTED: protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Erythranthe guttata]) HSP 1 Score: 228.8 bits (582), Expect = 1.000e-56 Identity = 106/183 (57.92%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_014710 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 7.100e-134 Identity = 225/240 (93.75%), Postives = 228/240 (95.00%), Query Frame = 1
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E7K6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066930 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.300e-76 Identity = 132/181 (72.93%), Postives = 148/181 (81.77%), Query Frame = 1
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Match: A0A022RQG1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a001144mg PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 7.100e-57 Identity = 106/183 (57.92%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Match: F6HIB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00530 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.100e-55 Identity = 103/185 (55.68%), Postives = 132/185 (71.35%), Query Frame = 1
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QUA2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G168700 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 3.300e-54 Identity = 109/207 (52.66%), Postives = 138/207 (66.67%), Query Frame = 1
BLAST of Spo17981.1 vs. ExPASy Swiss-Prot
Match: EDM2_ARATH (Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana GN=EDM2 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.200e-41 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 1
BLAST of Spo17981.1 vs. TAIR (Arabidopsis)
Match: AT5G48090.1 (EDM2-like protein1) HSP 1 Score: 189.1 bits (479), Expect = 3.100e-48 Identity = 87/131 (66.41%), Postives = 100/131 (76.34%), Query Frame = 1
BLAST of Spo17981.1 vs. TAIR (Arabidopsis)
Match: AT5G55390.1 (ENHANCED DOWNY MILDEW 2) HSP 1 Score: 171.4 bits (433), Expect = 6.800e-43 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17981.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17981.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17981.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo17981.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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