Spo18049.1 (mRNA)

Overview
NameSpo18049.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPeptidyl-prolyl cis-trans isomerase 1
LocationSpoScf_00434 : 295494 .. 300938 (-)
Sequence length1322
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGACGGAGGACGTGCTCGTACGAACCTTCCGCGGCTTACATACGCTCTCAGGAGGCCCGAAAGCTTGAACATACCAAATTCTTAACGAATCAAAGTCAACCAACAAAAATTCAAAGTCCATTCAAGCTCGAGTTAGCTCAAAGCATCGAACACTAACAATCTAACCCGGATCGACTCGTTTGCGGCCTTAGTCCTCATAAGCCTTGATTGGTGAAGCCTTAACCCGTTAACCCGTAAGGGAAGTGGATCATTTACCTTTCTTACCAAAACAAACAAAAATGAAGTACGGAGTATATATATACACTCACAGATCACACACTTATCTAACTAAAGCCATTTTTCTTCCACGACCGGAAGAAGAAAACCAGACGGAAAAAATAGAGTCCTCAGGGAGGAAGCGGCGGAAAGAAGCTTCGAACGACGGCGATCAAGGCGGAGGCGGCGGAGGAGTAGGAGAGAGAAACCGAGAGAAAGAGAAGCGCCACCACCATCATCGTCACCAGGAACACAAGAAATCTAAGAAAATGTCGACGACTCAGCAAGTTAGGGCATCTCACATCTTGATAAAGCACCAAGGTTCTCGCAGAAAGGCTTCCTGGAAGGATCCAGAAGGTGTTGTTATCCTCAATACTACTAAAGAATCTGCAATCTCTCAGCTCAAATCGATTCGCGATGATATTCTTTCTGGAAACGCCAACTTTGAAGATGTAGCTTCTCGCATCTCCGATTGCAGCTCTGCCAAGCGAGGCGGCGATCTAGGTTTATCTCTCTTCTCTCTCCTCTTTTATTTCGTCTTCTTTTGATGTTTCATATGAGTGACTGCGTGGAAACCCTAATTAATTGATTTGTTAGGTTTGTTTTAATGTTTTGTGGTAATTTTTTACGCCTGAATTCCTTAAACCCTAACAATTAGCTGCTCTTCTGGAATTTGTTCAATATTTGGATTGTGTAGTAGTGATTTAGTCGTTTCTATTCCATATTGGGAATTTCTTACTAGAATTCACTAGCTTGACATATTTGATGTATTGAAGACTGTCATCACATTCTGTCACTCAAGTACCTATGTCTCAACACCATAGGTATGCCACTTAGAAAATCATTTGCACCAAACTCATTCATTTCACCTAAAGTACCTGTGTCGGACACTCCCCATGAAAGTGATGACACTTTGACACTTCATTCTGTGTAGTACAATAGTGATTTAGTCGGTTCTATTCGATACGGGGAATTTTTGACTAAAGTTATTACTCGCTAGCTTGACATATTTGATGTATTGAAGACTGTCATCACATCCTGTTTATTTTGATGTTTTTTTTTCCATTCTTCAACGCACCTTTTTTAATAGTTTCTAAATACTTTGTTAGTCAAGTACCTATGTTAATACTCAACACCATGGGTATGCCACTTAGACACTTTGTTTTGGACCAAATTCATGCATTTCACCTAAATTACCTGTGCCGGACACTTGGCATGGGTATGATGACACTTGGACACTTCATTTGTACCAAACACGTGCAAAATTTTCGTAGCATACCCGTGTTTAAAACCTGGACACATACTTGTGCCTTACTACACTAGCCGAGTTCTAGTAACATCTCCTAAAAACTGTAGTCTCTTCCGAAAAGATTGGTCACAACCGAGTTCTAGTAACATTTCCTAGAAATGATGCATCTATTGTGGAACGGAGGAAGTATATGATATGTGTTATTATTTCCTTTGTTTCAATGTAGGTTGCAAATGTAATATCATAGTTGTTTCAAGTAGAACTTAAATTCACTCTATGAAAACAATGTACAATGTACAGAGTATTAGTTGATACATGATGTTGTCAAATTAACTTAAAAATTCTAGTCGAAGAATAGACCACAAAAGATAAGTAGTAGCAAAAAGTAACGTCATAGCGATGTTCTTTTATTTAGAAGGAAGGGATTACTCATTGTGTGTTCTAAATTTATGCATTCAACAAATATCAATATGAACTTTCTTGTTCTCTGATAATCAGCTTGATCAAAGGGTATTTACTTAGCAATATAGCATACATCTCCCTGAATTAAGCGATACTATCAGGGTTTGTATATGTGACAAGGATCTTATCGAAATAATGTTTAAGCCCGTGAATAACTTCTCATTCCTCTATCGTGGTCTTTGCTTGCTGCTGTCCCATCTCATCTCATTAGGGAAAAAAACCCACCAATTCATTATTATTTTATCAATTAAGTAACAGTTTGTTTAAACTTTAACTCCGTAAGCCAAGAATGAAGGAATTCTTTGTGTCTTCATAGAAAAAGGCAGGTTGAAATAATCAAAAGTTGGTAAGGCTAAAAGAAAGAACTTAATGAATGAAACAGAGTGGGGAAATTATAAAGAATGGAAAGGTGACGGTCATTTATGTGTTTATAAAGTATTTTCATATTTTGGTAAATCAATAACCTGTGGTGGAAAATCTTAAGTCTTAATTCCTGTAGTGTATGGTTACATATGATCAGGTCAGTGTTATATTTCTGAGACCAGCCAAAAGCTCATGTTATGATGTTAGTGTTGAGTACACATAACTCATGCTATCCCCCCAAAAGAAGTCATATTAGTAAAGATTTTTGCTCCTTCTTAAGTAAAGTTTGACAAATGACAAATAGTGTCTCCTTTTTGAGGAAAGAGTATTGAGCCCACTGATTAGAAACTTCTATAATGACCTTCATATGAAGTGAGAATGTTTGGAATTCATTTCTTTTATATTTGGAGAATTTTGTTGTCATTATTCTATTCATTAGATGATACAAGACACCCAGGTACACAAGAATGAAGACATATATAACTATGTAAGTGGATAAATCATATATAACTATATAAGTGGTGAATCATCCACAAGAAGTACTTGGTTTAGAAAGAAACGAAAGTGAAAACTAAACTCTGGTCTTACAGACTTGCACTCTGAAATGATAATCTCAAATACTTCTGGTTTCAATACTACAATAACCTATAAGTTGTTTGAGGTTCAACAACATAAGCTAATGAAATATCGAGTAGCAGAATCATATCCTGGATTGTTGGCGTATTCTGGTGATTTTGCTGGTTACCTCGTGTGCTTAAACTTCTTAGTTCTTTCTTAAATGTGCACTGTGCAGTAACTGTTTGCTTGTTCTACTTGAGGAAATTGTTTGCTCGTTTAAGTAAAGATTTTCGCTCTTTCATAAATTGACAAGTGACAAATAGTCTTTTTGGGAAAGAGTAGTGAACCCACTGATTAGCAAGCTCTTTTATATGAAGAACTTCTATAATGACCTTGATATGAATTATGAACTTTCTTGGTTAAAAAGTAAGGATTGTTGGAATTGGTTTCTTTTATGTTTGGAGAAGTTTGTTGTCATCAATCTACTCTTTAGATGATCACAAAACACCCAGGTAGACAAGAATGAAGGCATTCTTGGCGTGGATAAATGATTTATAGTACTCCCTCTGTCTCGTAATACTCGACCTGTTTTGATCGGACACGCTTGCCAATGCACAACTTTGACCACCAATTTCTTTAAATGCATATTATTAAAACTTATAAAAGTATTAATATTTTGAAAATATATATTAAGATGAAGCCAACAATATATTATATATTAACATTTGTTTTCATATACTAGAAATAAAATTGGGTCAAAGTGAATTGTGTGAATAGTGTGAATAGTGCAAAAAGTCAAAACAGGTCGAGTAATAAGGGACTGAGGGAGTATAACTATGTAAGTGGTGAATCATCTACAAGAAGTGCTTGGTTTAGAAAGAAACGAAAATGAATCCTAAACTCTGGTCTTACAAATTTGCACTCTTACACGATAATCTCAAACACTTTTGTTTTCAATACTACAATAACCTATAATTAATGAATGAAAGCTCGAGTAGCAGAATCATATCCTGGATTGTGGTGCGTATTCTGGTGATTTTGCTGGTTACCTTATGTGCTTAAACTTCTTAGTTCTTACTTAAGTGTGCACTGTGCATTAACTGTTTGTTTGTTCTACTTGAGAAAATTGTTTGCTCGTCGCTCAGTACTGATAATACTGTCAACTGGTGTACCTGTAGTTGAGACTTGAGAGTCCTGAACAGGGTTCTTTGTGAAACTTTTTTTTTAGTTGAGATGCTTGAAATGTTCACAACTTGAGGGAAGCGAACTCATGGAGCTTATGCCCGAATTGTTAATTTTGAAATTGTCAGTAACACGTTCTGTCACGGGGATTAACCTAGTCATTCGTGTTGCTTTGTATCCTGAGCTGAGTTTTGAGGCATTGATTCACAATTGTTAGTGTGAAGCCTTGGAATTTATTGTGGAACCAATACTTTTTTCTCATTAGGTACAAAAAAATATATTGGAATATTGAATACTGGATGTGTTTTTTTACTTTAGTTACAACATACAAGCAAAGCACAAATAATTGAGAAGTTCCTAGTGAATGTTGTGCATGCTGCCTGTGTATTGTGTATTATCAAGTAGACCTGATCATCATGAGCCCAGCCCGGCCAAAAAATAGCGGAGTTCGGTGCAGAAAATTGGCCCGGGTCTTGGGCCCGACCCGGATTTTAATTTTTCGGGTGGGTTTTGGGAAAAATGAGCAGTTTACGCTTTAGTAAGTAGTGCCCTCTCCCCAAAAATCTCAATCTAGACAACTCAAAGTTGCAATTTCTGTTATAAATTTGTCCCATCCCGAAAATGTCCTGAAAAGCCCGCTATGCCCGAAATAGCGGGTTTTTGGCAGAAACTCTTCTTGCTATATAATCTACATATTTTATTAGAGCTGCATTTTGCTCTAATTATTTTTCCATATATCTTGATATATACATACATGATGGGCTTGACTGTTGTCCCTAACCCTAACCATGTCGTGGGTGTTTGTTTCCGCAGGTCCGTTTGGTCCGAGGCAGATGCAGAAACCTTTTGAAGATGCAACATTTGCTCTAAAAGTTGGGGAGATAAGCGACATTGTTGAGACCGACAGTGGAGTTCACATCATCAAGAGAACAGGATGAGTTGGTTGCCGGAGCACCATGTGGATTCCGATTCCGATTGTTTTGTTGAATAGGCTTCAAATTTTCAAGAAGAAAGTGTTTGGGATGTTAGTTATTTTACTGTGCTTTTACGATACAATGTTTGCCCGATCAGGCTATTGCGGTCGTGATAAACGCTTTATCGGATTCGTATTGATTGAGGGATAATAGCTTTTAATTCTCTCATGTTTTGTTGTGTTCAAAGATGTGTAAAACTACCAACCGGGTTGGCTATATTGATGGAAACCGTGTTTTTGTCTAAAGACATGCATGAATAGGCAATATGTTTCTCTCTTATATTGACACTTCGTTTTTTTTGTTGTTGTGTGGGGATTCATTTTCTTAATTCACCGTTTTGTACGTAATAGGTGTATGATAAATTTATTAAAAATTGAGTTATTTTTTAGTTTTTATTCAAT

mRNA sequence

GTGACGGAGGACGTGCTCGTACGAACCTTCCGCGGCTTACATACGCTCTCAGGAGGCCCGAAAGCTTGAACATACCAAATTCTTAACGAATCAAAGTCAACCAACAAAAATTCAAAGTCCATTCAAGCTCGAGTTAGCTCAAAGCATCGAACACTAACAATCTAACCCGGATCGACTCGTTTGCGGCCTTAGTCCTCATAAGCCTTGATTGGTGAAGCCTTAACCCGTTAACCCGTAAGGGAAGTGGATCATTTACCTTTCTTACCAAAACAAACAAAAATGAAGTACGGAGTATATATATACACTCACAGATCACACACTTATCTAACTAAAGCCATTTTTCTTCCACGACCGGAAGAAGAAAACCAGACGGAAAAAATAGAGTCCTCAGGGAGGAAGCGGCGGAAAGAAGCTTCGAACGACGGCGATCAAGGCGGAGGCGGCGGAGGAGTAGGAGAGAGAAACCGAGAGAAAGAGAAGCGCCACCACCATCATCGTCACCAGGAACACAAGAAATCTAAGAAAATGTCGACGACTCAGCAAGTTAGGGCATCTCACATCTTGATAAAGCACCAAGGTTCTCGCAGAAAGGCTTCCTGGAAGGATCCAGAAGGTGTTGTTATCCTCAATACTACTAAAGAATCTGCAATCTCTCAGCTCAAATCGATTCGCGATGATATTCTTTCTGGAAACGCCAACTTTGAAGATGTAGCTTCTCGCATCTCCGATTGCAGCTCTGCCAAGCGAGGCGGCGATCTAGGTCCGTTTGGTCCGAGGCAGATGCAGAAACCTTTTGAAGATGCAACATTTGCTCTAAAAGTTGGGGAGATAAGCGACATTGTTGAGACCGACAGTGGAGTTCACATCATCAAGAGAACAGGATGAGTTGGTTGCCGGAGCACCATGTGGATTCCGATTCCGATTGTTTTGTTGAATAGGCTTCAAATTTTCAAGAAGAAAGTGTTTGGGATGTTAGTTATTTTACTGTGCTTTTACGATACAATGTTTGCCCGATCAGGCTATTGCGGTCGTGATAAACGCTTTATCGGATTCGTATTGATTGAGGGATAATAGCTTTTAATTCTCTCATGTTTTGTTGTGTTCAAAGATGTGTAAAACTACCAACCGGGTTGGCTATATTGATGGAAACCGTGTTTTTGTCTAAAGACATGCATGAATAGGCAATATGTTTCTCTCTTATATTGACACTTCGTTTTTTTTGTTGTTGTGTGGGGATTCATTTTCTTAATTCACCGTTTTGTACGTAATAGGTGTATGATAAATTTATTAAAAATTGAGTTATTTTTTAGTTTTTATTCAAT

Coding sequence (CDS)

ATGAAGTACGGAGTATATATATACACTCACAGATCACACACTTATCTAACTAAAGCCATTTTTCTTCCACGACCGGAAGAAGAAAACCAGACGGAAAAAATAGAGTCCTCAGGGAGGAAGCGGCGGAAAGAAGCTTCGAACGACGGCGATCAAGGCGGAGGCGGCGGAGGAGTAGGAGAGAGAAACCGAGAGAAAGAGAAGCGCCACCACCATCATCGTCACCAGGAACACAAGAAATCTAAGAAAATGTCGACGACTCAGCAAGTTAGGGCATCTCACATCTTGATAAAGCACCAAGGTTCTCGCAGAAAGGCTTCCTGGAAGGATCCAGAAGGTGTTGTTATCCTCAATACTACTAAAGAATCTGCAATCTCTCAGCTCAAATCGATTCGCGATGATATTCTTTCTGGAAACGCCAACTTTGAAGATGTAGCTTCTCGCATCTCCGATTGCAGCTCTGCCAAGCGAGGCGGCGATCTAGGTCCGTTTGGTCCGAGGCAGATGCAGAAACCTTTTGAAGATGCAACATTTGCTCTAAAAGTTGGGGAGATAAGCGACATTGTTGAGACCGACAGTGGAGTTCACATCATCAAGAGAACAGGATGA

Protein sequence

MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo18049Spo18049gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo18049.1Spo18049.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18049.1.utr5p.1Spo18049.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18049.1.CDS.2Spo18049.1.CDS.2CDS
Spo18049.1.CDS.1Spo18049.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18049.1.utr3p.1Spo18049.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18049.1.exon.2Spo18049.1.exon.2exon
Spo18049.1.exon.1Spo18049.1.exon.1exon


Homology
[Close]
BLAST of Spo18049.1 vs. NCBI nr
Match: gi|902224686|gb|KNA19855.1| (hypothetical protein SOVF_057620 [Spinacia oleracea])

HSP 1 Score: 389.8 bits (1000), Expect = 2.900e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE 60
           MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE
Sbjct: 1   MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE 60

Query: 61  RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK 120
           RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK
Sbjct: 61  RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK 120

Query: 121 ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK 180
           ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK
Sbjct: 121 ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK 180

Query: 181 VGEISDIVETDSGVHIIKRTG 202
           VGEISDIVETDSGVHIIKRTG
Sbjct: 181 VGEISDIVETDSGVHIIKRTG 201
[Close]
BLAST of Spo18049.1 vs. NCBI nr
Match: gi|731337576|ref|XP_010679861.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 209.5 bits (532), Expect = 5.300e-51
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = 1 

		  

Query: 83  MSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFE 142
           M+T QQVRASHILIKHQGSRRKASWKDPEG VI+NTTKESAISQL+SIRDDILS  ANF+
Sbjct: 1   MATKQQVRASHILIKHQGSRRKASWKDPEGRVIMNTTKESAISQLQSIRDDILSHKANFD 60

Query: 143 DVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           DVASRISDCSSAKRGGDLG FGP QMQKPFE+ATFAL+VGEIS IVETDSGVHIIKRTG
Sbjct: 61  DVASRISDCSSAKRGGDLGSFGPGQMQKPFEEATFALEVGEISGIVETDSGVHIIKRTG 119
[Close]
BLAST of Spo18049.1 vs. NCBI nr
Match: gi|823241249|ref|XP_012453241.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase ssp-1-like [Gossypium raimondii])

HSP 1 Score: 201.4 bits (511), Expect = 1.400e-48
Identity = 109/173 (63.01%), Postives = 133/173 (76.88%), Query Frame = 1 

		  

Query: 29  NQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNREKEKRHHHHRHQEHKKSKKMSTTQQ 88
           ++  KI+S  RKR+K + +  D+    GG   +++      +HH H++  K    S   Q
Sbjct: 103 SKAAKIDSD-RKRKKSSISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPANQ 162

Query: 89  VRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASRI 148
           VRASHILIKHQGSRRKASWKDPEG VI NTT+++A+SQLK++RDDI SGNA F +VASR 
Sbjct: 163 VRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVASRH 222

Query: 149 SDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           SDCSSAKRGGDLGPFG  QMQKPFEDAT++LK+GEISDIV+TDSGVHII RTG
Sbjct: 223 SDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRTG 274
[Close]
BLAST of Spo18049.1 vs. NCBI nr
Match: gi|763804030|gb|KJB70968.1| (hypothetical protein B456_011G099300 [Gossypium raimondii])

HSP 1 Score: 201.4 bits (511), Expect = 1.400e-48
Identity = 109/173 (63.01%), Postives = 133/173 (76.88%), Query Frame = 1 

		  

Query: 29  NQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNREKEKRHHHHRHQEHKKSKKMSTTQQ 88
           ++  KI+S  RKR+K + +  D+    GG   +++      +HH H++  K    S   Q
Sbjct: 35  SKAAKIDSD-RKRKKSSISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPANQ 94

Query: 89  VRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASRI 148
           VRASHILIKHQGSRRKASWKDPEG VI NTT+++A+SQLK++RDDI SGNA F +VASR 
Sbjct: 95  VRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVASRH 154

Query: 149 SDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           SDCSSAKRGGDLGPFG  QMQKPFEDAT++LK+GEISDIV+TDSGVHII RTG
Sbjct: 155 SDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRTG 206
[Close]
BLAST of Spo18049.1 vs. NCBI nr
Match: gi|728832844|gb|KHG12287.1| (Peptidyl-prolyl cis-trans isomerase Pin1 [Gossypium arboreum])

HSP 1 Score: 201.4 bits (511), Expect = 1.400e-48
Identity = 112/180 (62.22%), Postives = 137/180 (76.11%), Query Frame = 1 

		  

Query: 29  NQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNR----EKEKRHHHHRHQEHKKSKKMS 88
           +++ KI+S  RKR+K + +  D+     G   +++         HHHH H  HKK  KMS
Sbjct: 32  SKSAKIDSD-RKRKKSSISSADRTAAKEGDKHKDKAPTSSTNHHHHHHHHHHHKKKSKMS 91

Query: 89  TT---QQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANF 148
           ++    QVRASHILIKHQGSRRKASWKDPEG VI +TT+++A+SQLK++RDDI SGNA F
Sbjct: 92  SSSPANQVRASHILIKHQGSRRKASWKDPEGRVISSTTRDAAVSQLKALRDDITSGNAKF 151

Query: 149 EDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
            +VASR SDCSSAKRGGDLGPFG  QMQKPFEDAT++L +GEISDIV+TDSGVHII RTG
Sbjct: 152 GEVASRHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLNIGEISDIVDTDSGVHIIMRTG 210
[Close]
BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK33_SPIOL (Peptidylprolyl isomerase OS=Spinacia oleracea GN=SOVF_057620 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.000e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE 60
           MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE
Sbjct: 1   MKYGVYIYTHRSHTYLTKAIFLPRPEEENQTEKIESSGRKRRKEASNDGDQGGGGGGVGE 60

Query: 61  RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK 120
           RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK
Sbjct: 61  RNREKEKRHHHHRHQEHKKSKKMSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTK 120

Query: 121 ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK 180
           ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK
Sbjct: 121 ESAISQLKSIRDDILSGNANFEDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALK 180

Query: 181 VGEISDIVETDSGVHIIKRTG 202
           VGEISDIVETDSGVHIIKRTG
Sbjct: 181 VGEISDIVETDSGVHIIKRTG 201
[Close]
BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CC69_BETVU (Peptidylprolyl isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130000 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.700e-51
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = 1 

		  

Query: 83  MSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFE 142
           M+T QQVRASHILIKHQGSRRKASWKDPEG VI+NTTKESAISQL+SIRDDILS  ANF+
Sbjct: 1   MATKQQVRASHILIKHQGSRRKASWKDPEGRVIMNTTKESAISQLQSIRDDILSHKANFD 60

Query: 143 DVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           DVASRISDCSSAKRGGDLG FGP QMQKPFE+ATFAL+VGEIS IVETDSGVHIIKRTG
Sbjct: 61  DVASRISDCSSAKRGGDLGSFGPGQMQKPFEEATFALEVGEISGIVETDSGVHIIKRTG 119
[Close]
BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Match: A0A0D3D365_BRAOL (Peptidylprolyl isomerase OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.200e-49
Identity = 112/171 (65.50%), Postives = 138/171 (80.70%), Query Frame = 1 

		  

Query: 30  QTEKIESSGRKRRKEASNDGDQGGGGGGVGERNREKEKRHHHHRHQEHKKSKKMSTTQQV 89
           ++ KI+S  RKR+K++ +  D+           + K+KR  HH ++ H+K  KMS+  QV
Sbjct: 30  KSSKIDSD-RKRKKDSVSSTDRPS-------EEKPKDKRDDHHSNK-HRKKSKMSSRDQV 89

Query: 90  RASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASRIS 149
           +ASHILIKHQGSRRKASWKDPEG VI+ TT+E+A  QLKSIR+DILSG ANFEDVA+R+S
Sbjct: 90  KASHILIKHQGSRRKASWKDPEGKVIMTTTREAAAEQLKSIREDILSGKANFEDVATRVS 149

Query: 150 DCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRT 201
           DCSSAKRGGDLGPFG  QMQKPFE+AT+ALKVG+IS+IV+TDSGVHIIKRT
Sbjct: 150 DCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGDISEIVDTDSGVHIIKRT 191
[Close]
BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Match: A0A0D2T5K4_GOSRA (Peptidylprolyl isomerase OS=Gossypium raimondii GN=B456_011G099300 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.000e-48
Identity = 109/173 (63.01%), Postives = 133/173 (76.88%), Query Frame = 1 

		  

Query: 29  NQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNREKEKRHHHHRHQEHKKSKKMSTTQQ 88
           ++  KI+S  RKR+K + +  D+    GG   +++      +HH H++  K    S   Q
Sbjct: 35  SKAAKIDSD-RKRKKSSISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPANQ 94

Query: 89  VRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASRI 148
           VRASHILIKHQGSRRKASWKDPEG VI NTT+++A+SQLK++RDDI SGNA F +VASR 
Sbjct: 95  VRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVASRH 154

Query: 149 SDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           SDCSSAKRGGDLGPFG  QMQKPFEDAT++LK+GEISDIV+TDSGVHII RTG
Sbjct: 155 SDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRTG 206
[Close]
BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NI47_GOSAR (Peptidylprolyl isomerase OS=Gossypium arboreum GN=F383_20232 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.000e-48
Identity = 112/180 (62.22%), Postives = 137/180 (76.11%), Query Frame = 1 

		  

Query: 29  NQTEKIESSGRKRRKEASNDGDQGGGGGGVGERNR----EKEKRHHHHRHQEHKKSKKMS 88
           +++ KI+S  RKR+K + +  D+     G   +++         HHHH H  HKK  KMS
Sbjct: 32  SKSAKIDSD-RKRKKSSISSADRTAAKEGDKHKDKAPTSSTNHHHHHHHHHHHKKKSKMS 91

Query: 89  TT---QQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANF 148
           ++    QVRASHILIKHQGSRRKASWKDPEG VI +TT+++A+SQLK++RDDI SGNA F
Sbjct: 92  SSSPANQVRASHILIKHQGSRRKASWKDPEGRVISSTTRDAAVSQLKALRDDITSGNAKF 151

Query: 149 EDVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
            +VASR SDCSSAKRGGDLGPFG  QMQKPFEDAT++L +GEISDIV+TDSGVHII RTG
Sbjct: 152 GEVASRHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLNIGEISDIVDTDSGVHIIMRTG 210
[Close]
BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.900e-50
Identity = 96/118 (81.36%), Postives = 108/118 (91.53%), Query Frame = 1 

		  

Query: 84  STTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFED 143
           S   QVRASHILIKHQGSRRKASWKDPEG +I NTT++SA+SQLK++RDDILSG A F+D
Sbjct: 4   SAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKFDD 63

Query: 144 VASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           +A+R SDCSSAKRGGDLGPFG  QMQKPFE+ATFALKVGE+SDIV+TDSGVHIIKRTG
Sbjct: 64  LAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRTG 121
[Close]
BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.400e-48
Identity = 93/118 (78.81%), Postives = 109/118 (92.37%), Query Frame = 1 

		  

Query: 83  MSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFE 142
           M++  QV+ASHILIKHQGSRRKASWKDPEG +IL TT+E+A+ QLKSIR+DI+SG ANFE
Sbjct: 1   MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60

Query: 143 DVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRT 201
           +VA+R+SDCSSAKRGGDLG FG  QMQKPFE+AT+ALKVG+ISDIV+TDSGVHIIKRT
Sbjct: 61  EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118
[Close]
BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.700e-44
Identity = 87/117 (74.36%), Postives = 105/117 (89.74%), Query Frame = 1 

		  

Query: 85  TTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDV 144
           ++++VRASHILIKHQGSRRK+SWKDP+G +I  TT++ A+SQL+S+R ++LS  A+F D+
Sbjct: 2   SSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDL 61

Query: 145 ASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRTG 202
           ASR S CSSAKRGGDLGPFG  QMQKPFE+ATFALKVGEISDIV+TDSGVHIIKRTG
Sbjct: 62  ASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRTG 118
[Close]
BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Match: PIN1_MOUSE (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.700e-25
Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 1 

		  

Query: 88  QVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASR 147
           +VR SH+L+KH  SRR +SW+  +    +  +KE A+  +      I SG  +FE +AS+
Sbjct: 56  KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQ 115

Query: 148 ISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRT 201
            SDCSSAK  GDLGPF   QMQKPFEDA+FAL+ GE+S  V TDSG+HII RT
Sbjct: 116 FSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 164
[Close]
BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Match: PIN1_MACFA (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca fascicularis GN=PIN1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.000e-25
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 

		  

Query: 88  QVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFEDVASR 147
           +VR SH+L+KH  SRR +SW+  +    +  TKE A+  +      I SG  +FE +AS+
Sbjct: 54  RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 113

Query: 148 ISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRT 201
            SDCSSAK  GDLG F   QMQKPFEDA+FAL+ GE+S  V TDSG+HII RT
Sbjct: 114 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162
[Close]
BLAST of Spo18049.1 vs. TAIR (Arabidopsis)
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 194.1 bits (492), Expect = 8.100e-50
Identity = 93/118 (78.81%), Postives = 109/118 (92.37%), Query Frame = 1 

		  

Query: 83  MSTTQQVRASHILIKHQGSRRKASWKDPEGVVILNTTKESAISQLKSIRDDILSGNANFE 142
           M++  QV+ASHILIKHQGSRRKASWKDPEG +IL TT+E+A+ QLKSIR+DI+SG ANFE
Sbjct: 1   MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60

Query: 143 DVASRISDCSSAKRGGDLGPFGPRQMQKPFEDATFALKVGEISDIVETDSGVHIIKRT 201
           +VA+R+SDCSSAKRGGDLG FG  QMQKPFE+AT+ALKVG+ISDIV+TDSGVHIIKRT
Sbjct: 61  EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118
The following BLAST results are available for this feature:
BLAST of Spo18049.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224686|gb|KNA19855.1|2.9e-105100.hypothetical protein SOVF_0576... [more]
gi|731337576|ref|XP_010679861.1|5.3e-5189.0PREDICTED: peptidyl-prolyl cis... [more]
gi|823241249|ref|XP_012453241.1|1.4e-4863.0PREDICTED: peptidyl-prolyl cis... [more]
gi|763804030|gb|KJB70968.1|1.4e-4863.0hypothetical protein B456_011G... [more]
gi|728832844|gb|KHG12287.1|1.4e-4862.2Peptidyl-prolyl cis-trans isom... [more]
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BLAST of Spo18049.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RK33_SPIOL2.0e-105100.Peptidylprolyl isomerase OS=Sp... [more]
A0A0J8CC69_BETVU3.7e-5189.0Peptidylprolyl isomerase OS=Be... [more]
A0A0D3D365_BRAOL1.2e-4965.5Peptidylprolyl isomerase OS=Br... [more]
A0A0D2T5K4_GOSRA1.0e-4863.0Peptidylprolyl isomerase OS=Go... [more]
A0A0B0NI47_GOSAR1.0e-4862.2Peptidylprolyl isomerase OS=Go... [more]
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BLAST of Spo18049.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PIN1_MALDO5.9e-5081.3Peptidyl-prolyl cis-trans isom... [more]
PIN1_ARATH1.4e-4878.8Peptidyl-prolyl cis-trans isom... [more]
PIN1_DIGLA3.7e-4474.3Peptidyl-prolyl cis-trans isom... [more]
PIN1_MOUSE1.7e-2553.1Peptidyl-prolyl cis-trans isom... [more]
PIN1_MACFA5.0e-2553.1Peptidyl-prolyl cis-trans isom... [more]
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BLAST of Spo18049.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G18040.18.1e-5078.8peptidylprolyl cis/trans isome... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 93..200
score: 4.1
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROFILEPS50198PPIC_PPIASE_2coord: 86..201
score: 29
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 141..161
scor
NoneNo IPR availableGENE3D3.10.50.40coord: 88..200
score: 4.2
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 72..201
score: 2.9
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1coord: 72..201
score: 2.9
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 85..200
score: 2.03

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006457 protein folding
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity