Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTAGTTAAGAAATAAAAAAACGAGTTAACGAATTGTCCATTTTCTCTCTCTTCAAATTGGGGGTTGTTTGGACAAAGCTGATCGAGTTGAGATGAATCAGAGCGCAATAACAAGAACCCCAACCACATCACTATCCACAATTCTCTCTCGTCAACTTCTTTTACTCATCATCGCCGGAATCCTTTTCCCGGCGCCGGCAACCAGCATCCGGTTACCGGATTCAACGTCGGATCAGCCCTTGAGTACCGCCGTCTTTGCTCTCGGAAGTTTCTGGAGATCCGAGCCTGTTTTCGGTTGCTTTAACGGCGTTGTTCGCACCACTGTTGGTTATTCCGGTGGCTCTAAGCTTAATCCTGAGTACCGAAGTTTGTCCGATCATGCTGAATCTGTTCAGGTAAATTCTTCCATTTTTCTTTGTCGTCTTCTAATTATTGTTTAATTTTCCCCCTTCTTTTTCGTTTTGTTTTTCTTGCGGATTGGTGTTTTATAATGTTTGTGTCTGTATGATTTGATGGATTTTATATGGAAAAATTGCATAATCTTTTGAATGTTTTGGATGATTGGGGGAAACGTTGTTAGAAGTGTGTTTGATTTGATTGAAGTAGTTTGATTGTAGAACTTTCATATGGTGAACTGGGGAATCGCTTTATTTCTAGGTTTTGACTCTTGGTAATGCAATTTACTGCATTGTCTTTTGTATGTGTTTTGTGATTGTTGAGCCAAAAGTTGTTGAAGGTTGTAATTGAAGTGATTGCTCTATATTTAGAGCAATGTGGTTGCACATTGTCCAAATTTTATATAGGGAAGCTTTCTACCTCTAGGTTTCGACATTAAGGCTCCGCTTGGTTGGGCGAAAAACGTTTTTATTGAATATAAAAACAAAATTCTAAAATAGTTTTCCTTTGTTTGGTTCCTTATAAAAGTTATTGAAAAAAGAAAATAAGAGTAGATGGGTGAGGATTGATGGGAAGTAAGAAGAGGAGGTGAGGAGTAAGGCTCCGTTTGGTAGGGCGTAAATGGTTTTCATTGTAAAATGATTTTCCATGGAAAACATTTTTTAAGGGAAAATACAATTCCAAACTAGTTTTCCTTTGTTTGGTAACTTAAAGAAAAATGAGAGAAGATGGTGAAGATTGAGGTAAGGAGGAAAGAAGGAAAAGTGGTTTCCTCCTTTTCAAATGGAAAAGGGTTTTCCACCTTTGAGGGAGTCATGGAAAATTGTTTTACATCCCTTACCCAACCAAACAACATAAATGATTGAAAAGGGAAAAATCGTTTTCCATAAAAACGTTTTACGCCCTATCACACGGAGCCTAAAAGTGTAAACTTGGTTTCCCTTCCTCCTAATGGAAAATATTTTCCACCCTTGTATGAGTTATTGGAAAATGGTAAAACACCCTTTACCATAACAAACAATGTAAAATGATTGAAAAAAGAAAAATCATTTTCCATGAAAATGTCATGAGAATGATTTACACCAAACCAAACCAAACACTCCCTATTCCCTAATATGGTATTGCTTTACTTTGTCGCAATAACTTTAAGTAGCATTGCTTGTTGGAAAGAGGAGGAGGAGGGGCGAGTGGAAAAGTTCTAGCTTCATGACTTATTCAGCTCTTCTGAAATTCAAAAACAAGAAAATAATGAGGATCAGTGCACTCGACTTTGATGTCATTAGGAAAGAAGAACAGTTTGAGCTAAGGCGAAGAAATTAGTTTGTATTCGAAGTGTTGTTCACGTAATTGTGATACATTTCCGATGCACACTCTTGTCATAATCACATCAGTAGGCCCTCAGATCAAACTATTGGATGCGCATTTTCTTTTTGTATTGATTTATCTATTACTTACTAGATTGACTTTCGTATGGTGTTTAGATTGAGTATGATCCCAGAGTTATAAGCTTCCGGCAACTTTTGGAGGTCTTCTGGTCAAGTCATGATTCAAGGCAGGTATTCGGACAAGGCCCTGACGTTGGTAACCAGTACAGGTGAGATGTGTGATCTCTTGGAAAGTAACTTGCTCCATGCCTTATTATAAGTTTAATTTCTCACTCAGTGAACTGGTTTGTGTTGACAGGTCTATCATCTTCACTAATGGTACGAGTGAGTCCAGATTGGCCGCTGCCACCAAGGAAAGGGAGCAGACTAAATCAAAGAGCAGTATAGTGACTACCCAAATTCAACCCTTGGGGACTTTTTATCCTGCTGAACCTGAGCATCAGGTATTGCTTATGATACACTCTCAGAGAATGTTTGGTATAAACTTAGGAAATACAATGGAAAGGAAATAAATAAGAAAGGGAAAGGATAGTGTTAGCTATTACCATTATCAGTTGTCTGGTATACCTTAGAAAATGAATTCACTTGTACCCAGTTGGGGATTGAGGAGGGTAACCCATTTTGTTACCATAGAGTTGGGGAAGGTAACATATTGTGGTAATGGTTACCCTTAGGAAAGAGATTGTGTTACCACACCTTTTCATACCAAACATTAGGTAATGGAAAATTGGAAATAGTTCAGTGATTCCATTTCCATCACTTAAAAACACTATTACCAAACATGCTCTCAATGATCAAGCACCTTTTTTATCTAATTTTATCTTGACGGATACTCTTAGGACAAATGTCAAGAAAATGATTGGCTGCTGCTGCATGTTTTGCTTACTAAGAAAACAAGATTTGCAATAAGTGTTGCTTTTCTTTGGTTTGTTACTCAGGTTCTTGTGAATTTAATAAGCCATCAGAAAGAAATCCATAGAACATAGTTACCCTTACGCTAGTGTTTAGAGTTTAGACTTTCTTTTGGCCAGGAAATCTATGGTTATTCCTGTTATACAGCCAAAAGAAAAGGCTTTCAGGTTAGCTGATGTTGTTCCCTTTCAATATCCACAGAAATTTGAGCTCAAAAGGGGTCCTTTTCTCCTTCACTTGATTACCAATGTAGGAAGCTTCTTGCTCTCAATGAATCAATCACATTTTTCTAATTTTATCTAGATAGGGATACTATTAGGGTAAATGTGAAGAAAATGATTGGCTGCTGCTGCATGTTTTGCTTGCTCAGAAAAGTAGATTTGTAATGTGTTGGCTTTTCTTTGGTTTGTTTAGGATTTGCAATGTGTGTTACTATAATGAGAATTTAATAAGCCATCAGAAAGAAATCCATAGAACATAGTAGAGATGATCAACATTGGCCCGCCCGAAAATTACCGGGTTTTGGACAGAATATTTTGGCCCAATTTGCGGGCCTGGTCCGACTTTTTTGTGGCTTTGGGCAAAGTAAAACAACAATTTTAGTTATAAAGTTGACCCGGCCCGTTTTGGCCTGAAATAGCGGGTTTTGGGCACATAAAATTGCCCCGGAGCTTGGCCTGGTCCGGCCCGACATAATGGCAGATTTTTATGACCATAGCCCGGCCCGAACCCCTACCTGGACCGCCTTTTGATCAGGTCTAGAACATAGTTACCCTTACTCTAGTGTTTAGAGTTTAGACTTTCTTTTCCGCTTGAACTCTATGGTTATTACTTGTTATACAGCCAAAAGAAACGGCTTTCAGGTTAGCTGATGTTGTTCCCTTTCAAAATCCACAGAAATTTGAGCTCAAAAGAAACCCTTTTCTCCTTCACTTGATTGGGAACTTGCCAGAAGAAGAGCTTCAGCAATCAACCTTGGCATCGAAAATGAACAGTTATGCAGCCGAACTTTGCCCTCAACGGATTCAGAAGCAAATCGATGCCAAGATTAATGACATAATCAGGAAAGGTTGGCCTGTTTTGAGGGAAATCTAGTACAGACAGAACCAAGGTGCCACAACAAAACAGGGTTTTTTCAAGCCCCATTGATTTTGACAGGTTAATAGCAGTTCCGAATCGAGCATCGGTTAAATATTACTATTGATTGGAGCAAATTACCAAATTTAGGAGGCTTCTTGCTGAAATGTGTTGTAGAATGAGCATTTTTTTGGGTGCATGTATCTCTATTGTCAAATGTATTCTTAGTGGTGTACAGTAATGCTGTATGCCTGTATGTACCTGATTGTTGTAATTCTTCAGAAATCAGGATATGATATGATAATATACAGTAGCACTAATGGCCGTGGCAAGCTATGAACATTTTTGGAATGAACATTAATTCTCTGGGTGTAAAAACCTTGATATGGTAGTTTAGGTAAGATGTTGATTAATCATTATTTTTAACCCATTAAATACATTGAAGTATATTACATCG AATTTAGTTAAGAAATAAAAAAACGAGTTAACGAATTGTCCATTTTCTCTCTCTTCAAATTGGGGGTTGTTTGGACAAAGCTGATCGAGTTGAGATGAATCAGAGCGCAATAACAAGAACCCCAACCACATCACTATCCACAATTCTCTCTCGTCAACTTCTTTTACTCATCATCGCCGGAATCCTTTTCCCGGCGCCGGCAACCAGCATCCGGTTACCGGATTCAACGTCGGATCAGCCCTTGAGTACCGCCGTCTTTGCTCTCGGAAGTTTCTGGAGATCCGAGCCTGTTTTCGGTTGCTTTAACGGCGTTGTTCGCACCACTGTTGGTTATTCCGGTGGCTCTAAGCTTAATCCTGAGTACCGAAGTTTGTCCGATCATGCTGAATCTGTTCAGATTGAGTATGATCCCAGAGTTATAAGCTTCCGGCAACTTTTGGAGGTCTTCTGGTCAAGTCATGATTCAAGGCAGGTATTCGGACAAGGCCCTGACGTTGGTAACCAGTACAGGTCTATCATCTTCACTAATGGTACGAGTGAGTCCAGATTGGCCGCTGCCACCAAGGAAAGGGAGCAGACTAAATCAAAGAGCAGTATAGTGACTACCCAAATTCAACCCTTGGGGACTTTTTATCCTGCTGAACCTGAGCATCAGAAATTTGAGCTCAAAAGAAACCCTTTTCTCCTTCACTTGATTGGGAACTTGCCAGAAGAAGAGCTTCAGCAATCAACCTTGGCATCGAAAATGAACAGTTATGCAGCCGAACTTTGCCCTCAACGGATTCAGAAGCAAATCGATGCCAAGATTAATGACATAATCAGGAAAGGTTGGCCTGTTTTGAGGGAAATCTAGTACAGACAGAACCAAGGTGCCACAACAAAACAGGGTTTTTTCAAGCCCCATTGATTTTGACAGGTTAATAGCAGTTCCGAATCGAGCATCGGTTAAATATTACTATTGATTGGAGCAAATTACCAAATTTAGGAGGCTTCTTGCTGAAATGTGTTGTAGAATGAGCATTTTTTTGGGTGCATGTATCTCTATTGTCAAATGTATTCTTAGTGGTGTACAGTAATGCTGTATGCCTGTATGTACCTGATTGTTGTAATTCTTCAGAAATCAGGATATGATATGATAATATACAGTAGCACTAATGGCCGTGGCAAGCTATGAACATTTTTGGAATGAACATTAATTCTCTGGGTGTAAAAACCTTGATATGGTAGTTTAGGTAAGATGTTGATTAATCATTATTTTTAACCCATTAAATACATTGAAGTATATTACATCG ATGAATCAGAGCGCAATAACAAGAACCCCAACCACATCACTATCCACAATTCTCTCTCGTCAACTTCTTTTACTCATCATCGCCGGAATCCTTTTCCCGGCGCCGGCAACCAGCATCCGGTTACCGGATTCAACGTCGGATCAGCCCTTGAGTACCGCCGTCTTTGCTCTCGGAAGTTTCTGGAGATCCGAGCCTGTTTTCGGTTGCTTTAACGGCGTTGTTCGCACCACTGTTGGTTATTCCGGTGGCTCTAAGCTTAATCCTGAGTACCGAAGTTTGTCCGATCATGCTGAATCTGTTCAGATTGAGTATGATCCCAGAGTTATAAGCTTCCGGCAACTTTTGGAGGTCTTCTGGTCAAGTCATGATTCAAGGCAGGTATTCGGACAAGGCCCTGACGTTGGTAACCAGTACAGGTCTATCATCTTCACTAATGGTACGAGTGAGTCCAGATTGGCCGCTGCCACCAAGGAAAGGGAGCAGACTAAATCAAAGAGCAGTATAGTGACTACCCAAATTCAACCCTTGGGGACTTTTTATCCTGCTGAACCTGAGCATCAGAAATTTGAGCTCAAAAGAAACCCTTTTCTCCTTCACTTGATTGGGAACTTGCCAGAAGAAGAGCTTCAGCAATCAACCTTGGCATCGAAAATGAACAGTTATGCAGCCGAACTTTGCCCTCAACGGATTCAGAAGCAAATCGATGCCAAGATTAATGACATAATCAGGAAAGGTTGGCCTGTTTTGAGGGAAATCTAG MNQSAITRTPTTSLSTILSRQLLLLIIAGILFPAPATSIRLPDSTSDQPLSTAVFALGSFWRSEPVFGCFNGVVRTTVGYSGGSKLNPEYRSLSDHAESVQIEYDPRVISFRQLLEVFWSSHDSRQVFGQGPDVGNQYRSIIFTNGTSESRLAAATKEREQTKSKSSIVTTQIQPLGTFYPAEPEHQKFELKRNPFLLHLIGNLPEEELQQSTLASKMNSYAAELCPQRIQKQIDAKINDIIRKGWPVLREI Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo18050.1 vs. NCBI nr
Match: gi|902224685|gb|KNA19854.1| (hypothetical protein SOVF_057610 [Spinacia oleracea]) HSP 1 Score: 496.9 bits (1278), Expect = 2.100e-137 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo18050.1 vs. NCBI nr
Match: gi|731337578|ref|XP_010679862.1| (PREDICTED: peptide methionine sulfoxide reductase A5 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 417.9 bits (1073), Expect = 1.200e-113 Identity = 211/258 (81.78%), Postives = 230/258 (89.15%), Query Frame = 1
BLAST of Spo18050.1 vs. NCBI nr
Match: gi|1009144175|ref|XP_015889655.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Ziziphus jujuba]) HSP 1 Score: 377.1 bits (967), Expect = 2.400e-101 Identity = 189/239 (79.08%), Postives = 208/239 (87.03%), Query Frame = 1
BLAST of Spo18050.1 vs. NCBI nr
Match: gi|998072091|ref|NP_001307171.1| (peptide methionine sulfoxide reductase A5 [Solanum lycopersicum]) HSP 1 Score: 370.2 bits (949), Expect = 2.900e-99 Identity = 179/225 (79.56%), Postives = 197/225 (87.56%), Query Frame = 1
BLAST of Spo18050.1 vs. NCBI nr
Match: gi|970005343|ref|XP_015063510.1| (PREDICTED: peptide methionine sulfoxide reductase A5 [Solanum pennellii]) HSP 1 Score: 369.4 bits (947), Expect = 5.000e-99 Identity = 178/225 (79.11%), Postives = 198/225 (88.00%), Query Frame = 1
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLQ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_057610 PE=3 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.500e-137 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBI9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130010 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 8.600e-114 Identity = 211/258 (81.78%), Postives = 230/258 (89.15%), Query Frame = 1
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Match: G3K2M5_SOLLC (Methionine sulfoxide reductase A5 OS=Solanum lycopersicum GN=MSRA5 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.100e-99 Identity = 179/225 (79.56%), Postives = 197/225 (87.56%), Query Frame = 1
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Match: A0A067G6W4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025993mg PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.500e-97 Identity = 180/239 (75.31%), Postives = 200/239 (83.68%), Query Frame = 1
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Match: V4SIV9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026355mg PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.500e-97 Identity = 180/239 (75.31%), Postives = 200/239 (83.68%), Query Frame = 1
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Match: MSRA5_ARATH (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana GN=MSRA5 PE=2 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 6.600e-91 Identity = 155/206 (75.24%), Postives = 183/206 (88.83%), Query Frame = 1
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Match: MSRA5_ORYSJ (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica GN=MSRA5 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.000e-84 Identity = 143/201 (71.14%), Postives = 174/201 (86.57%), Query Frame = 1
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Match: MSRA_DROME (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster GN=Eip71CD PE=2 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 5.300e-32 Identity = 81/220 (36.82%), Postives = 125/220 (56.82%), Query Frame = 1
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase MsrA OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=msrA PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.800e-30 Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 1
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Match: MSRA_DICDI (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum GN=msrA PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.400e-27 Identity = 65/144 (45.14%), Postives = 89/144 (61.81%), Query Frame = 1
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein) HSP 1 Score: 335.1 bits (858), Expect = 3.700e-92 Identity = 155/206 (75.24%), Postives = 183/206 (88.83%), Query Frame = 1
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1) HSP 1 Score: 105.1 bits (261), Expect = 6.200e-23 Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Match: AT4G25130.1 (peptide met sulfoxide reductase 4) HSP 1 Score: 101.7 bits (252), Expect = 6.900e-22 Identity = 64/167 (38.32%), Postives = 87/167 (52.10%), Query Frame = 1
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2) HSP 1 Score: 101.7 bits (252), Expect = 6.900e-22 Identity = 61/163 (37.42%), Postives = 90/163 (55.21%), Query Frame = 1
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Match: AT5G07470.1 (peptidemethionine sulfoxide reductase 3) HSP 1 Score: 95.5 bits (236), Expect = 4.900e-20 Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18050.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18050.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18050.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18050.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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