Spo18171.1 (mRNA)

Overview
NameSpo18171.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionCytoplasmic tRNA 2-thiolation protein 1
Locationchr4 : 122159102 .. 122163119 (+)
Sequence length432
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGATGAATTGGGTGTTCAATTATGCCATACCCCACCTCATAACGCAAACAACGATATACTCAAACCACGACGACTATAGAGATTTTAAAAGGTCTACTGAAAGTGAAAAACCTAATAAAAACAACGATGTGGTAACAAAGTATTTTAGGATGCCCCTTCATTATCCGAGGTATACTAAGGAAGATTATTCGAAGATGGAGGAGTGGAAGGTGGATATGCTACTAAAGGAATATGGACTTGAGAATCATATCAAAGGTAGTCTTGAAGAGAAGAGGATGTTTGCTATGGGAGCTTTTTTGTGGCCTGATCAACTTTAATTTCTATTTTTTTTACTCTTTAATTTAGCAATAATATATACAAGTACTATGTACCAACCAACATAAGTTGGTAGAGTTGGTGGGAGTCACAAGTTCGAGCCCCATCAACTGCGATATGCTTGGGAGTGACTCAAACGATGACCTGCGAAGCTGAGCTGGTTTACCTGTGCTAGGTGCTGGTTTAGTTTAGGGTCTATTCTTCTTACCTATTAAAAACAAAAAAAAACCAAGTACTCTGTTGTGTACTAGGTATGTCGAATTTCAATTTCATGTACAGTAGTATGAAGTATAATGAAGTTGTATTTCATGCCATGCATCCTATTGTTTATCTTTTGTTTTAATGAAATTTAGTTCGATTAACTTAATTTTGACAACTTTGACAGTACAAAGAAGTAGGAGGAAACTTTTAAAAAAGAAAAAAATTAAAACAAAATTGAGCTTTGCAAATGAGCCCTTAATTTGATAATTTCTTACTCCGCAGTCCGCACCAAAATTGACAAGTGAACCCTTTCTCGTCTCTCCTCTCTCCTCGTTGGTTTTTTGTTTTGTTTTAGTACCCGGTTCATCCTTAGGGTTAATCCAAATTCGGTGCGAGTTTTGGGTGGATAGGTTTCAGTCCCCTCCCAATTGTGTAGGTTCAGTGGGGCTGAACTTGCCCCCTACGTATGTGTTTGATGGTGGTGAACTATGGACCCGGTCCATGCTATAATTAGCGTGGACCAGGGTGTTTTTGTAAATTAACAATCAGGAATATTTCACGTAACCTAACATACCTCCATTCCCTTCTTTTTCTCCCTTCCCTGCACACCACCCCTTCCATTTTCTCTCTCCTCCCTTTCCCCATGGTTAGTAACTTGTTAGGCTTAATAATAGTAGTTGGGCCATAAAGGTTGGATTATTTAGAAATATCGTATAGGTAGGCTTAATTAAAGAAAATAGGGCAAAGATTGGATTAATAATTACAAATTTTCCTATTTAAAAAAGATATAATTCTAATTCTAGTTAAGCTTCCTTGTAATAAATATATTTATAATTTTAATAAAAATACGGGGTACAAGTATTACCGACAGTTTTCAGTTTTTTCGTTCTGTAAGTTTTTTTTAATTATTTTATTCAAATGAGAAGAAGAGTTTCGAAATAAGGAAAAAAAGAGCAAGACTAAAACCAGACTAAATTTTTATGCACGGGTTCAATTTAAATCATACGGCTAAGCGCGGAAAAGCCACACCCCTAACATCTTCCTTCAATTTTTTTTGGTTTTGTAAGTCTTATGATTTAAATTGATTCATGAACTAAAAAAATAACCTAGTTATAGTAAGATTGATTTTGAAAAAAGACAATTAAATAGGATAAAGACTCCACTTAAGTCTTGGGAAAACTCACACTAATCAGATTAATTTTGAAAACTGACAATAAAAAAGTAAAAATAACTTTTTATGATTTTCATATTTTGTTTATAATCTAGTTATGTAAAAAGCTGAAAATTGAAAAACAAAAAACGATATGAAAGGAGTAGGGGTGTCAAATCGGATCAACGGGTCGGGTTTGGGTCGGACTCATCGGATTCGGGTTGAAACGGATAGGATTGGGACGGATTAATTTGGCTAACGGGTCGGATCGGATCGGATTGAAAACTTAACGGATTGGATCGGATTGAAAACTTAACGGATTGGATCGGATCGGATTTTTTATGCACGGGTTCATATCGGATCGGGTTGTAAACGGGTCGGATTTTAGTCGGGTTGGGTCGGATCGGATCGGATTGGAACATGACGGATTGTTAAAGGATTTATCCGGACTATAACGGGTTCGGATTCATATTGGGTCGGATTAATCGGGTAACGGGCTAACACGGGTCGGATCGGGTTATTGGGTAGCGGGTTGAAATTCGAGCCGGGTACATTTGGTTCCAAATTATATAATTATAATATCGATGACTTAATTAGGAGATGAAAACGATAACTAACTTTTAAAAGTAATAAACATTTAAGATCAGTAATATAAGTTAGTGAGTATATAATATATAACTTAGTTTAATACTACATCCGTTACGGAAAGTTCTTTACGCCTCAAATCTACATCAATTACAAGTTTCATTTGAGTATAGTATATAATTTAAAGGGAGAATGAAGTACAAGTACACCGTATAACTAATAGTCATACACTTAATTGGTAGTGCATCATAATTAATGTTCTCTTATGGGTTCTGAACGATTTGGGTTAAACGGGTTCAGATCGAAGTTGGTTCGGATTAAACGGGTCATGGGTTGAAACGGTTTGAATTAAACAGGTCACGGATTACAAACTGATCGGATTATACAGATTTTCCTCGGGTTCAAACGGATTGGAGCATAAACGGGTTTCGAATCGCTTCGGTTCGGATTAAACGGATTCAGGTTGTCACGGATCAGTCTGTTATCGGATTCAGATCTTAATCGGATCAATATTAACGGGTTGGGTCGGATTCGGGTTGAATATAATCGGACCGGATCGGATTTCGGATCTTAGATTACAGTTCATATTCTAAACGGTCGGACAAACCCATCAGGTTTATTGGGTCGGATTGAGAATTGACACCCTGGAAAGGAACTAACAAAATGTAAGTCTTTTTCTCGTGGCAATTATTTACACCCGGTTACACGTAGTTCTACGTGTAACCAGTTCATTTTATACTTTTAACCCCTCAAAAGCATATTTTTATAGTTTAAAAGCACATATTTACAAATTAAAAGCACTTTTTTACAGTTTTAAAGCACATTATTAAAGATGAAAAACAAAGTTTTGCTGGTAAAAGGAAATGAAAAATATATAAGTATGTGCTTTTAAATCATTAATGTGCTTTTTAAGTACGGAAACTTTTNAATGAAAAATATATAAGTATGTGCTTTTAAATCATTAATGTGCTTTTTAAGTACGGAAACTTTTGTGTAAGACCGCCTTACCGGAAAGACCACTTTAAAATGAATTTTAGTGCTTAACTAATTAGTTTCATTGCTTAACTAATTAGTTTCATTGCTTAACTAATTGATTTTAATGCTTAACTAGTTAGTTCTAGTGCTTAACTAATTGGTTCTAGTGCTTAACTAATTGATTTTAGTGCTTAACTTATATGACACCAAGGTAGTCTTTTGTGTAAGACCGCCTTATAGAAAAGTTTGTATGTAAACGTGCTTTTAAGCCGTAAAAATATATGTTTTTAACCCGGTTACACGTAGAACTACATGTAACCGGAGACCGGGTGTACCTTATAATTTTTGTGTGGTTTGTTCGTCTTACATAAACCAAAGTCGATTTCCCCCCTTTCTTCTCCAAAATAAGAACACTTGAATTCGCTACAGCCGGGGCCTTACACAGTCTATCCACCCTCTTCTCCCCGGCGGCACCGGTAGCCCAGTACTCTGTTTCAGCGTCACGGTATTCAACTCTATCTCTTTCTGTCTCCAAAACTTTTAACCCTTTTGTTTGATTGCAATTTTATCTACTCAATCTTGTACGTCTTTTGAAATTACCAGTACCCTTTTTGTTTCCATTGTAATTTCCTCGTAATAGAACAATCTATGATCTTGTTTCTGTTTTCCGGGTGATAATTTATAGATTCCTGCTTTTCAATTGTTTAATTGTCAAGTTTAATTCTTGTTCCCAGATAACCAAAATAAACCCAAAATTGAAAGTTCCCCAGTTGGGCTTTGTCTAA

mRNA sequence

ATGGCAATGATGAATTGGGTGTTCAATTATGCCATACCCCACCTCATAACGCAAACAACGATATACTCAAACCACGACGACTATAGAGATTTTAAAAGGTCTACTGAAAGTGAAAAACCTAATAAAAACAACGATGTGGTAACAAAGTATTTTAGGATGCCCCTTCATTATCCGAGGTATACTAAGGAAGATTATTCGAAGATGGAGGAGTGGAAGGTGGATATGCTACTAAAGGAATATGGACTTGAGAATCATATCAAAGGTAGTCTTGAAGAGAAGAGGATGTTTGCTATGGGAGCTTTTTTCCGGGGCCTTACACAGTCTATCCACCCTCTTCTCCCCGGCGGCACCGGTAGCCCAGTACTCTGTTTCAGCGTCACGATAACCAAAATAAACCCAAAATTGAAAGTTCCCCAGTTGGGCTTTGTCTAA

Coding sequence (CDS)

ATGGCAATGATGAATTGGGTGTTCAATTATGCCATACCCCACCTCATAACGCAAACAACGATATACTCAAACCACGACGACTATAGAGATTTTAAAAGGTCTACTGAAAGTGAAAAACCTAATAAAAACAACGATGTGGTAACAAAGTATTTTAGGATGCCCCTTCATTATCCGAGGTATACTAAGGAAGATTATTCGAAGATGGAGGAGTGGAAGGTGGATATGCTACTAAAGGAATATGGACTTGAGAATCATATCAAAGGTAGTCTTGAAGAGAAGAGGATGTTTGCTATGGGAGCTTTTTTCCGGGGCCTTACACAGTCTATCCACCCTCTTCTCCCCGGCGGCACCGGTAGCCCAGTACTCTGTTTCAGCGTCACGATAACCAAAATAAACCCAAAATTGAAAGTTCCCCAGTTGGGCTTTGTCTAA

Protein sequence

MAMMNWVFNYAIPHLITQTTIYSNHDDYRDFKRSTESEKPNKNNDVVTKYFRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAFFRGLTQSIHPLLPGGTGSPVLCFSVTITKINPKLKVPQLGFV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo18171Spo18171gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo18171.1Spo18171.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18171.1.exon.1Spo18171.1.exon.1exon
Spo18171.1.exon.2Spo18171.1.exon.2exon
Spo18171.1.exon.3Spo18171.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18171.1.CDS.1Spo18171.1.CDS.1CDS
Spo18171.1.CDS.2Spo18171.1.CDS.2CDS
Spo18171.1.CDS.3Spo18171.1.CDS.3CDS


Homology
[Close]
BLAST of Spo18171.1 vs. NCBI nr
Match: gi|870861656|gb|KMT12928.1| (hypothetical protein BVRB_4g090120 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 131.7 bits (330), Expect = 1.000e-27
Identity = 63/99 (63.64%), Postives = 83/99 (83.84%), Query Frame = 1 

		  

Query: 4   MNWVFNYAIP-HLITQTTIYSNHDDYRDFKRSTESEKPNKNNDVVTKYFRMPLHYPRYTK 63
           +NWV NY +P +LITQTT Y NH+  +D+K+S E+E PN  N+V+   FR+PLHYPRYTK
Sbjct: 3   LNWVSNYTLPCYLITQTTTYPNHN-LKDYKKS-ETENPNTKNNVLMDDFRVPLHYPRYTK 62

Query: 64  EDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           EDY+KMEEWK+DMLL +YGL++H++G+L+EKR FAMGAF
Sbjct: 63  EDYAKMEEWKLDMLLGQYGLDHHVEGNLDEKRKFAMGAF 99
[Close]
BLAST of Spo18171.1 vs. NCBI nr
Match: gi|870861658|gb|KMT12930.1| (hypothetical protein BVRB_4g090140 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 101.7 bits (252), Expect = 1.100e-18
Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 1 

		  

Query: 4   MNWVFNYAIPHLITQTTIYSNHDDYRDFKRSTESEKPN---KNNDVVTKYFRMPLHYPRY 63
           + W FN A  H +        H   ++ K+    +K N   K N V T  F+MPLHYPRY
Sbjct: 3   LKWFFNSAFTHTLV-------HTPDQNIKQHQTIQKVNLQAKQNGVST--FQMPLHYPRY 62

Query: 64  TKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           TK +Y KMEEWKVDMLLK+YGL++H+KGSL+EKR FAMGAF
Sbjct: 63  TKAEYEKMEEWKVDMLLKQYGLDHHVKGSLDEKRKFAMGAF 94
[Close]
BLAST of Spo18171.1 vs. NCBI nr
Match: gi|1009107321|ref|XP_015879134.1| (PREDICTED: uncharacterized protein LOC107415338 [Ziziphus jujuba])

HSP 1 Score: 93.6 bits (231), Expect = 3.000e-16
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 1 

		  

Query: 17  TQTTIYSNHDDYRDFKRSTESEKPNKNNDVVTKYFRMPLHYPRYTKEDYSKMEEWKVDML 76
           T + I+    D +  K ST +    KNN    + F+MPLHYPRYTK DY KMEEWKVDML
Sbjct: 22  TVSQIHHADGDLKSLKVSTSNGVAVKNNINHDEQFQMPLHYPRYTKADYEKMEEWKVDML 81

Query: 77  LKEYGLENHIKGSLEEKRMFAMGAF 102
           LK+YG+ N I+GSL+EKR FAMGAF
Sbjct: 82  LKQYGIAN-IQGSLDEKRAFAMGAF 105
[Close]
BLAST of Spo18171.1 vs. NCBI nr
Match: gi|357447993|ref|XP_003594272.1| (hypothetical protein MTR_2g026420 [Medicago truncatula])

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-13
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 1 

		  

Query: 51  FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           F+MPLHYPRYTK DY KMEEWKV++LLKEYGL    KGSL+EKR FAMGAF
Sbjct: 54  FQMPLHYPRYTKVDYEKMEEWKVELLLKEYGLS--FKGSLDEKRSFAMGAF 102
[Close]
BLAST of Spo18171.1 vs. NCBI nr
Match: gi|1000957640|ref|XP_015577098.1| (PREDICTED: uncharacterized protein LOC8282528 [Ricinus communis])

HSP 1 Score: 84.3 bits (207), Expect = 1.800e-13
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 1 

		  

Query: 51  FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           F++PLHYPRYTK DY KMEEW+VDMLL+EYGL   IKG+LEEKR FAMG F
Sbjct: 63  FQLPLHYPRYTKTDYQKMEEWRVDMLLREYGLS--IKGTLEEKRAFAMGTF 111
[Close]
BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLK2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g090120 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.000e-28
Identity = 63/99 (63.64%), Postives = 83/99 (83.84%), Query Frame = 1 

		  

Query: 4   MNWVFNYAIP-HLITQTTIYSNHDDYRDFKRSTESEKPNKNNDVVTKYFRMPLHYPRYTK 63
           +NWV NY +P +LITQTT Y NH+  +D+K+S E+E PN  N+V+   FR+PLHYPRYTK
Sbjct: 3   LNWVSNYTLPCYLITQTTTYPNHN-LKDYKKS-ETENPNTKNNVLMDDFRVPLHYPRYTK 62

Query: 64  EDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           EDY+KMEEWK+DMLL +YGL++H++G+L+EKR FAMGAF
Sbjct: 63  EDYAKMEEWKLDMLLGQYGLDHHVEGNLDEKRKFAMGAF 99
[Close]
BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGQ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g090140 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.700e-19
Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = 1 

		  

Query: 4   MNWVFNYAIPHLITQTTIYSNHDDYRDFKRSTESEKPN---KNNDVVTKYFRMPLHYPRY 63
           + W FN A  H +        H   ++ K+    +K N   K N V T  F+MPLHYPRY
Sbjct: 3   LKWFFNSAFTHTLV-------HTPDQNIKQHQTIQKVNLQAKQNGVST--FQMPLHYPRY 62

Query: 64  TKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           TK +Y KMEEWKVDMLLK+YGL++H+KGSL+EKR FAMGAF
Sbjct: 63  TKAEYEKMEEWKVDMLLKQYGLDHHVKGSLDEKRKFAMGAF 94
[Close]
BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Match: F6HCW0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00180 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.400e-14
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 1 

		  

Query: 44  NDVVTKY---FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGA 102
           +DVV K    F+MPLHYPRYTK DY KMEEWKVDMLL+EYGL    KG+LEEKR +AMGA
Sbjct: 45  DDVVEKCISGFQMPLHYPRYTKADYGKMEEWKVDMLLREYGLT--FKGTLEEKRAYAMGA 103
[Close]
BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Match: G7IPB3_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g026420 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.800e-14
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 1 

		  

Query: 51  FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           F+MPLHYPRYTK DY KMEEWKV++LLKEYGL    KGSL+EKR FAMGAF
Sbjct: 54  FQMPLHYPRYTKVDYEKMEEWKVELLLKEYGLS--FKGSLDEKRSFAMGAF 102
[Close]
BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Match: B9SA77_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0863040 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-13
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 1 

		  

Query: 51  FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           F++PLHYPRYTK DY KMEEW+VDMLL+EYGL   IKG+LEEKR FAMG F
Sbjct: 63  FQLPLHYPRYTKTDYQKMEEWRVDMLLREYGLS--IKGTLEEKRAFAMGTF 111
[Close]
BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Match: AT3G09950.1 (unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.300e-13
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1 

		  

Query: 32  KRSTESEKPNKNNDVV--TKYFRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGS 91
           K     E  +KN  V   +  F+MPLHYPRYTKEDY +MEEW++D+LL EYGL      +
Sbjct: 15  KNQESVENLDKNGAVKAPSSGFKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNT 74

Query: 92  LEEKRMFAMGAF 102
           L EKR FA+  F
Sbjct: 75  LHEKRAFAIDTF 86
[Close]
BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Match: AT5G41761.1 (unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 7.400e-13
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 1 

		  

Query: 17  TQTTIYS-NHDDYRDFKRSTESEKPNKNNDVVTKYFRMPLHYPRYTKEDYSKMEEWKVDM 76
           + TTI++ +H D  D +  T ++  +      +  F++PLHYP+YTK DY KM EW++D 
Sbjct: 10  SNTTIHNRSHQDGEDQRNETATKINHDKPQNQSSSFQIPLHYPKYTKSDYEKMPEWQLDR 69

Query: 77  LLKEYGLENHIKGSLEEKRMFAMGAF 102
           LL+EYGL   + G   EKR FA+GAF
Sbjct: 70  LLREYGLP--VIGDSYEKRKFAIGAF 93
[Close]
BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Match: AT3G55570.1 (unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.200e-12
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1 

		  

Query: 51  FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLENHIKGSLEEKRMFAMGAF 102
           FRMPLHYPRY+KEDY  M EWK+D +L +YGL  +  G L  KR FA+GAF
Sbjct: 32  FRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTY--GDLAHKRDFAIGAF 80
[Close]
BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Match: AT5G55620.1 (unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.200e-10
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 1 

		  

Query: 17  TQTTIYSNHDDYRDFKRSTESE--KPNKNNDVVTKYFRMPLHYPRYTKEDYSKMEEWKVD 76
           TQ   YSNH D     +ST ++  K  K  +  +  F++PLHYP+Y+K DY  M++ ++D
Sbjct: 12  TQMFGYSNHMDQASNCQSTRNKIIKMMKKEEFPSG-FQVPLHYPKYSKSDYEVMDDLRLD 71

Query: 77  MLLKEYGLENHIKGSLEEKRMFAMGAF 102
           +LLK+YG     +GSLE+KR+FA+ +F
Sbjct: 72  LLLKQYGFS--FEGSLEDKRVFAIESF 95
[Close]
BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Match: AT3G11405.1 (unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 7.200e-8
Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 1 

		  

Query: 32  KRSTESEKPNKNNDVVTKY-------FRMPLHYPRYTKEDYSKMEEWKVDMLLKEYGLEN 91
           K+++ S   N+++   + +       F+MPL YP Y KE Y  M E ++D LLK YGL  
Sbjct: 31  KKTSNSSSDNESDQFASLFGSSSPSSFQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPT 90

Query: 92  HIKGSLEEKRMFAMGAFF--RGLTQSI 110
            I G+L  K+ FA+GAF    GL  S+
Sbjct: 91  DI-GNLSCKKEFAVGAFLWETGLNSSL 116
The following BLAST results are available for this feature:
BLAST of Spo18171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|870861656|gb|KMT12928.1|1.0e-2763.6hypothetical protein BVRB_4g09... [more]
gi|870861658|gb|KMT12930.1|1.1e-1853.4hypothetical protein BVRB_4g09... [more]
gi|1009107321|ref|XP_015879134.1|3.0e-1658.8PREDICTED: uncharacterized pro... [more]
gi|357447993|ref|XP_003594272.1|1.4e-1378.4hypothetical protein MTR_2g026... [more]
gi|1000957640|ref|XP_015577098.1|1.8e-1376.4PREDICTED: uncharacterized pro... [more]
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BLAST of Spo18171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CLK2_BETVU7.0e-2863.6Uncharacterized protein OS=Bet... [more]
A0A0J8CGQ1_BETVU7.7e-1953.4Uncharacterized protein OS=Bet... [more]
F6HCW0_VITVI4.4e-1472.1Putative uncharacterized prote... [more]
G7IPB3_MEDTR9.8e-1478.4Uncharacterized protein OS=Med... [more]
B9SA77_RICCO1.3e-1376.4Putative uncharacterized prote... [more]
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BLAST of Spo18171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G09950.14.3e-1351.3unknown protein[more]
AT5G41761.17.4e-1344.1unknown protein[more]
AT3G55570.12.2e-1262.7unknown protein[more]
AT5G55620.11.2e-1042.5unknown protein[more]
AT3G11405.17.2e-839.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513FAMILY NOT NAMEDcoord: 16..101
score: 3.5
NoneNo IPR availablePANTHERPTHR33513:SF2SUBFAMILY NOT NAMEDcoord: 16..101
score: 3.5