Spo18444.1 (mRNA) | SpinachBase

Overview


Name	Spo18444.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein S2
Location	chr1 : 32130212 .. 32135346 (-)
Sequence length	1305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAGACCCGATGACCATGTTAGGAAGTCCAAGTTTAGTATAGTCATCCCCGAAAAAGAAAACCCAAAACCCTCCATTTTCACATCTTCCTCTTTCCTTACTACACCGGAGTTGTTGCAGAGACACTCCCTCTCCTCCGAAAATGACAATTCACTCGGTGGTTATCCAGAAGCTTCTCAGCACAAACGCTCACTTAGGCCGCCGCATCACCGCCCACCATTGCAAACCCTTCATCTATGGCAGCCGCAACGGCACCTCCATCATCGACTCCGACAAAACCCTAATTTCCCTCCGGAATGCGCTCGATTTCATCTCCCATCTTGTTCGCGGCAAGGCGCGCTTCCTCTTCGTCAACACCAACCCTCTTTTCGATGACATTTTCGACCACATGACTCGTAAGATCGGCCATGGCTCCTTTCTCTCTCCTCAAGCTCAGTACTGGCGTCTCGGGGGGTTTTTGACGAATTCTTCAAGCCCTAAGAAGTTTCGTTCTAGGAATAAGAAGATTTGCTTTGCTCCTGCTCAGCCTCCGGATTGTGTTGTCATTATGGATTTTGAGAGGAAGTCGTCTGTGATTAATGAGGCAGCCAGGCTTCAGATTCCGGTTATTGGTTTGGTTGATTCGAGTGTTCCCAGGGAGGTTTTCGAAAAGATTACTTACCCGATTCCGTGTAATGATTCGGTTCAGTTTGTTTATACGGTTTGTAATTTGATCACCAAGACGTTCTTGCTTGAGCAGAAGAGTTTGAATTTGAATGATGCTTCTGCAACTGATGCTTCTGCAATTATAGCTTCTGCAATTGAAGCTTCTGCAATTGAAGCTTCTGCTACTGATGCTTCTTCTACTGATGTTTTTGCTACTGATGCTTCCCTGGGGTAAGACGATAGTTGTTGTCCATCTTTATTTAGCTTAATTTGTATTGATTTGAGGATATGGAAATTTTTTATGGTAGTAATTATATTTGTGTAATCAAATTTTGTATGCTGAATTTGTGGGAAATTGTCAATTTTAATTTCCTGAACTGTCTTAACGTTGGCAAATTAATTTCTAGCAAAATTGAGAAATGGGGCTAGAAAGAAAATGTTGTGGGGGTTATGTGGAATTGTTATGGTGGTTGCTTAGCTTTAATTGATTGATTATTTTGGTTGACTTCGGGGAAAACTAATCCTTTATGTTATTGGAAAGCCATATGCTTTAGTGTATACTAAGTGCTTGATTCAAGATTGGCCATTTGTTTCGGAAAGTCTTTTTCTTAAATTCAAGTTTGAAGTAAAGAATAAGACTTTCCTACCACCAACGTTTTTTTTTTCCAGCGGGGTGGGGATAGTTGTTGCTTATGTGTAGGTGTTATGAATATGGTTAAGCTCTGGAAAAACCTTCAAGGTGAAATTCATTCATTCAAGATATGTTATTTTGACTTGTATTTTGTTGAATAGATCACTAGGGTTTGGATTTATTGTCTTGGACTGGCATTATTTGGAGTAGTTCCAATTTTGGGGATCAGTTGCTTCTGATATGTTGATAAATGAAAGGAAAATGATAGTGTACATTAGCAGTGTTGAGTCTGTTGACTACTCCGTATGTTATGAGGACTTGGGGTTATAAGTGGTAGTACTTTTTCTGGGTTAGTTCGGATTGGTTTCGAGGTCTTACTTTATGGTGGTGAAAGAAACTTGATAAACCTTTTAGTTGTCTTTAGTTACTAGGAAATTTTATGAGCATAAACTTTAGTTTTCATTTCTTAGGCTCCTTTTTATCAAAACAATGCGAGAGGAAGCATGGAGAGGCTAGATAGAACATAGATGGGAGGGGATGGAAGGGAGGAGAGAAGGCCAGGTTCGTCAGGAGGAGGAAGGTTAAACATGCAATGGTAAATGTTCTAAACTAATAATCTTTCCTCAAGTAAGAAATTTCATTTTTTAATTTTGGAAAAATCAACGACAATTAATTAATCATTATTTTACAAAGAGAACGAAGTTAATTTTGCAAATTAGTTTCCCTGAAAAATCAAACAGGCAAACACGACCTATATCTTAAATCAGTTTCTTCCATTGTGTTGAAATGTTGATTATACCGTCAAATTAGGCTGGATGAATGTTAAAGTCTGTTTGGGGTGCTGTTACATTTTAGCAGTTTCTTCTGCACAATTCTACTTTCGTCTTTTCCCCCCCACAAGTTCAAGTTCATATTTGTATAGTTTAGTGAAGACTTAGTTACTACTCGTAGTTCACTACAACTATAGAGATTAGAGAAGAACCAAATATGTAATAATCTAAAATTCTAAACTACTTATTTATTGTGAGGTAGGATATGGTCATTACTTTTTGTACGGTAGCTGCTTTTTTGTTGTTTCAGAAGTATGGCTGCATACATAAAACATTATTCAACCCCTTAATAGGTTGCAGCTATTTTGGAGGGCATTAGTGTAACTCTGATTTTGGCGTTGGATCATAAAAGACTGGATTTTTTTTAGCCTTTTATGTGGTCTTATTCTAGAGCAATCTTTGCTTTGTGTTGATTTTTTTTTATACAAGTTTCCGTCTTTGTCATGCTCCACCATCCAAAAATTTGTGCAAGTCTCTTTCTTTGTCATGCTCCACCATCTTGTAGTGGTGAAATAATATACCATTGGATTTGGTGATTTCGTGCTTTTGGCTAACCGTTTGGCATGGAGCTGTTTGGTTATACTGTATGTTGCGCAGAAGTGGATACTATAAGAATGGAGATGTGAATAGGCATCCTTTAAAGATGTAGAGGATGAATATTTCTAGAATGGGGCTGCTGTAATGCAAAATAATGATATTTGAGCAAGAGATTAGACTTACAGAGTGGGAAAAAGACTAGCTATAGATATAGTTGTGGCGCAGAATTTTATGTAAATCAAAGGTGATTTGTTGGTCTTGAAGGCCAGAGAGGGAGGGGATAAATATTGTGCGTTAGCTTCGTATAGGAGAGGTTCCCCCTAGGTTTCTTGGAGTTTTCTAAACCAAATAGTTTGAAAATGAGGGAACTAAACTTTCATGAAAATTTTGGCCGATGGAGGCTTTATTTGTAGCCTTTTGTTCCATTTATATACTTCCGTTGCCACACAGAGGTATAGATTGAATTTGAAGCATATTCGGTATGATTTGAATTCTAGGAAGTATCATGGTTTGGGAGAAAATAAATTGAAGAACTAAATGTAGAAGCTGAATGCCTTATTGAAGAGTCATATGGAATACATCAGTTTTGTACAAAATCTGTATTTGATATTAGCGTTTTGTGAAGAAAGTTTGGAGGGAACTGAAAGAATCAGAATATGTTCCGCAGTTCTGAATTTTGTGGAGAAATGTTGGGATAGTGCTGTGCATACAACTTTACATGTACCGAAAGTTCCAAGTGGTATAAATTTCTAATTCGGTCGTATCAAGGGTGAAGGTCTATTGGAAACCACTTCTTTGTTATTGCTTAAGGTCTTATGGAGTTATGGGGATTGGAATGAGGTTGTTGATTTTGGGTTGTAGAAGGTTGGAGTGTTTATTGTTTATCCATAATGATAAAATTGGAAGGCAAAACACAATTCAATGTTGAGAACTCGAGTAGTACTTGCTTCATGTGAAAAAAATGGGTATGAATTTCTGTCATTCACTTTTTGGCGTGGAGCGGTTAGGCCTGTATTATGTATTACGTGGAAGTGAGTGTGATAACAAATTTGGAGGCACAAAAGGATATTGGTAAAGGTATAGGAAAAAGTTGTTTCTAGGAAATGCAATAATTCTACCGTAAGCAAAAAGTAGGCTGTGAAAAGGCAATTAAGGATTTATGACCAAAAATAAAAAAAAGTCCAAGAGTTGGCCAAAAAGAAGCTGTATATATAGCTTTGGTGAAGAAGTTTGAATTTAGTGCCAATCTTATTACAATAAAAAGATCAGCGTAAAACAAAGTTAGTTTTAGACTTTAGTGATCAAGGGAGGGAAGACGGAAAGAGACTTAAAAGTGAAAGTCAGTTCCCTCGAGAAGAGATTTATGCTTTTTGCCTGTTTTTGGAGTTTCCAAATACAAATAGTTATGCAAATGGGGAAATGCAATCTTCATCATTGCGCAAGTTTTTTTCCGGCTGCTTTTTGCACGATTTATTTACTTTCATCTCAAGATAGTTTGGTTGCTGGTTGGTTAAATCTGAAGCATGTTAGAATTGATTTCAATTCCAGAAAGTGACATAGATTGGGAGCAAGAAAACTACAGAACATGTTTTAAATCTGAATGACTTATTGTAATTTATTGAGAAGCATTAGTGCATCCAATTTTATTTTAAATTAAAACAAAAAACAGTATTTGATATTTTGTGAATTACGTCAAAAAGGTCTGTGGAGAGCAGGAAGGATGAGAAGATGTGCAAAACTTGTGAATTTTAAGAAGTTGAGGGCTAAAAGTCTGTTACAGACTTACAGGTGGTAAATTGCAGCTGCTAATGTTTGTTGTTTTCATTTTTGCTAACATTGAACCCAAATTTTGTATATTTGCAATGATTTTGGGATTGCTTTTTTTCTCATACATGAAGGAATTTATTGGATAATTTGTTTACCTTCACCTTTTATATGCATCATTCTTATTGTGTTACTTTGGTCTTGAAGTGAGGAAGCAACGGTGACAGAAGATAATCAATCTTCAGAAGATTTGAAGGTTGTTGATACTCGCTGTCACGAATGGTATGATCTGATCTAAAGATTTTTTGGTGTAATTTTTTTCTGCTGTGCAGTTCTCTAGAATCCTGCTTATGTAATATTGTTTGATTCCACAGAGGTTATTGGGTGGATGAGCACAATAGAGTTAGGAAGAACGGTTTCAGTTGATCTTGAAGTAGTTGCTGCCATTCAGCAGACATTCTTCTTAGGTAGAATGTTAGGATACTTGCTCGAGATTATACGCTGAGGTGTTTCTCATGCCTATTTTTTTTTCTTAATAACAGTCAAAATACAAATTTTGTATAAATAGTTATTGTATGGTCCATTTTAATATGTTGAAATCCCTCATTGCAGAAGTTGTTTTTGATTCAACAGATTTCCCCTCAACCCCATGCTGTTTTCTGTAACATTGAAAAAACCCATATTTGAGTTGTAGAACAGAGGCTATGCGGTGATGAAACAATAAAGC

mRNA sequence

TCCAAGACCCGATGACCATGTTAGGAAGTCCAAGTTTAGTATAGTCATCCCCGAAAAAGAAAACCCAAAACCCTCCATTTTCACATCTTCCTCTTTCCTTACTACACCGGAGTTGTTGCAGAGACACTCCCTCTCCTCCGAAAATGACAATTCACTCGGTGGTTATCCAGAAGCTTCTCAGCACAAACGCTCACTTAGGCCGCCGCATCACCGCCCACCATTGCAAACCCTTCATCTATGGCAGCCGCAACGGCACCTCCATCATCGACTCCGACAAAACCCTAATTTCCCTCCGGAATGCGCTCGATTTCATCTCCCATCTTGTTCGCGGCAAGGCGCGCTTCCTCTTCGTCAACACCAACCCTCTTTTCGATGACATTTTCGACCACATGACTCGTAAGATCGGCCATGGCTCCTTTCTCTCTCCTCAAGCTCAGTACTGGCGTCTCGGGGGGTTTTTGACGAATTCTTCAAGCCCTAAGAAGTTTCGTTCTAGGAATAAGAAGATTTGCTTTGCTCCTGCTCAGCCTCCGGATTGTGTTGTCATTATGGATTTTGAGAGGAAGTCGTCTGTGATTAATGAGGCAGCCAGGCTTCAGATTCCGGTTATTGGTTTGGTTGATTCGAGTGTTCCCAGGGAGGTTTTCGAAAAGATTACTTACCCGATTCCGTGTAATGATTCGGTTCAGTTTGTTTATACGGTTTGTAATTTGATCACCAAGACGTTCTTGCTTGAGCAGAAGAGTTTGAATTTGAATGATGCTTCTGCAACTGATGCTTCTGCAATTATAGCTTCTGCAATTGAAGCTTCTGCAATTGAAGCTTCTGCTACTGATGCTTCTTCTACTGATGTTTTTGCTACTGATGCTTCCCTGGGTGAGGAAGCAACGGTGACAGAAGATAATCAATCTTCAGAAGATTTGAAGGTTGTTGATACTCGCTGTCACGAATGAGGTTATTGGGTGGATGAGCACAATAGAGTTAGGAAGAACGGTTTCAGTTGATCTTGAAGTAGTTGCTGCCATTCAGCAGACATTCTTCTTAGGTAGAATGTTAGGATACTTGCTCGAGATTATACGCTGAGGTGTTTCTCATGCCTATTTTTTTTTCTTAATAACAGTCAAAATACAAATTTTGTATAAATAGTTATTGTATGGTCCATTTTAATATGTTGAAATCCCTCATTGCAGAAGTTGTTTTTGATTCAACAGATTTCCCCTCAACCCCATGCTGTTTTCTGTAACATTGAAAAAACCCATATTTGAGTTGTAGAACAGAGGCTATGCGGTGATGAAACAATAAAGC

Coding sequence (CDS)

ATGACAATTCACTCGGTGGTTATCCAGAAGCTTCTCAGCACAAACGCTCACTTAGGCCGCCGCATCACCGCCCACCATTGCAAACCCTTCATCTATGGCAGCCGCAACGGCACCTCCATCATCGACTCCGACAAAACCCTAATTTCCCTCCGGAATGCGCTCGATTTCATCTCCCATCTTGTTCGCGGCAAGGCGCGCTTCCTCTTCGTCAACACCAACCCTCTTTTCGATGACATTTTCGACCACATGACTCGTAAGATCGGCCATGGCTCCTTTCTCTCTCCTCAAGCTCAGTACTGGCGTCTCGGGGGGTTTTTGACGAATTCTTCAAGCCCTAAGAAGTTTCGTTCTAGGAATAAGAAGATTTGCTTTGCTCCTGCTCAGCCTCCGGATTGTGTTGTCATTATGGATTTTGAGAGGAAGTCGTCTGTGATTAATGAGGCAGCCAGGCTTCAGATTCCGGTTATTGGTTTGGTTGATTCGAGTGTTCCCAGGGAGGTTTTCGAAAAGATTACTTACCCGATTCCGTGTAATGATTCGGTTCAGTTTGTTTATACGGTTTGTAATTTGATCACCAAGACGTTCTTGCTTGAGCAGAAGAGTTTGAATTTGAATGATGCTTCTGCAACTGATGCTTCTGCAATTATAGCTTCTGCAATTGAAGCTTCTGCAATTGAAGCTTCTGCTACTGATGCTTCTTCTACTGATGTTTTTGCTACTGATGCTTCCCTGGGTGAGGAAGCAACGGTGACAGAAGATAATCAATCTTCAGAAGATTTGAAGGTTGTTGATACTCGCTGTCACGAATGA

Protein sequence

MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHLVRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCNDSVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATDASSTDVFATDASLGEEATVTEDNQSSEDLKVVDTRCHE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18444	Spo18444	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18444.1	Spo18444.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18444.1.utr5p.1	Spo18444.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18444.1.CDS.3	Spo18444.1.CDS.3	CDS
Spo18444.1.CDS.2	Spo18444.1.CDS.2	CDS
Spo18444.1.CDS.1	Spo18444.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18444.1.utr3p.1	Spo18444.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18444.1.exon.3	Spo18444.1.exon.3	exon
Spo18444.1.exon.2	Spo18444.1.exon.2	exon
Spo18444.1.exon.1	Spo18444.1.exon.1	exon

Homology

[Close]

BLAST of Spo18444.1 vs. NCBI nr
Match: gi|731318170|ref|XP_010669577.1| (PREDICTED: ribosomal protein S2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 401.4 bits (1030), Expect = 1.300e-108
Identity = 205/263 (77.95%), Postives = 224/263 (85.17%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTI SV+IQKLLSTNAHLGRRITAHH KPF YG+RNG SIIDSDKTLISLRN+LDFISHL
Sbjct: 1   MTIQSVIIQKLLSTNAHLGRRITAHHFKPFTYGTRNGASIIDSDKTLISLRNSLDFISHL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNK 120
           VR K+RFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNS+SPKKFRSRNK
Sbjct: 61  VRAKSRFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSASPKKFRSRNK 120

Query: 121 KICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCNDS 180
           KICFAPAQPPDCVVI+DF++KSSVINEAARL IP+IGLVDSSVPREVF+KITYPIPCNDS
Sbjct: 121 KICFAPAQPPDCVVILDFDKKSSVINEAARLGIPIIGLVDSSVPREVFQKITYPIPCNDS 180

Query: 181 VQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATDASSTDVFAT 240
           VQFVY VCNLITKTFLLEQK+L+  DAS  DA                  +A + DV   
Sbjct: 181 VQFVYMVCNLITKTFLLEQKNLSFGDASTADAE-----------------NADNADV--- 240

Query: 241 DASLGEEATVTEDNQSSEDLKVV 264
           D  L  EA +T+DNQS+E++KVV
Sbjct: 241 DTDLSGEAKLTDDNQSAEEMKVV 243

[Close]

BLAST of Spo18444.1 vs. NCBI nr
Match: gi|802585255|ref|XP_012070327.1| (PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Jatropha curcas])

HSP 1 Score: 289.7 bits (740), Expect = 5.400e-75
Identity = 144/204 (70.59%), Postives = 165/204 (80.88%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTIHS+VIQKLLSTNAHLGRR+ AHH K F +G RN  +IIDSDKTLI LRNA  FISHL
Sbjct: 1   MTIHSIVIQKLLSTNAHLGRRVAAHHFKIFTFGMRNSQAIIDSDKTLICLRNAASFISHL 60

Query: 61  VRGK-ARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQY-WRLGGFLTNSSSPKKFRSR 120
            R K ARFLFVNTNPLFD+I + MT+KIG     SP+    WR+GGFLTNS SPKKFRSR
Sbjct: 61  ARDKKARFLFVNTNPLFDEIVEQMTKKIG---LYSPRDNIMWRMGGFLTNSFSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKK+CF P QPPDCVV++D ERKSSVI EA RLQ+P++ LVDSS+P E +++I YP+P N
Sbjct: 121 NKKVCFGPIQPPDCVVVLDTERKSSVIVEADRLQVPIVALVDSSMPWEYYKRIAYPVPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSL 203
           DSVQFVY  CN+ITKTFL EQK L
Sbjct: 181 DSVQFVYLFCNMITKTFLFEQKKL 201

[Close]

BLAST of Spo18444.1 vs. NCBI nr
Match: gi|802585257|ref|XP_012070328.1| (PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X2 [Jatropha curcas])

HSP 1 Score: 289.7 bits (740), Expect = 5.400e-75
Identity = 144/204 (70.59%), Postives = 165/204 (80.88%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTIHS+VIQKLLSTNAHLGRR+ AHH K F +G RN  +IIDSDKTLI LRNA  FISHL
Sbjct: 1   MTIHSIVIQKLLSTNAHLGRRVAAHHFKIFTFGMRNSQAIIDSDKTLICLRNAASFISHL 60

Query: 61  VRGK-ARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQY-WRLGGFLTNSSSPKKFRSR 120
            R K ARFLFVNTNPLFD+I + MT+KIG     SP+    WR+GGFLTNS SPKKFRSR
Sbjct: 61  ARDKKARFLFVNTNPLFDEIVEQMTKKIG---LYSPRDNIMWRMGGFLTNSFSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKK+CF P QPPDCVV++D ERKSSVI EA RLQ+P++ LVDSS+P E +++I YP+P N
Sbjct: 121 NKKVCFGPIQPPDCVVVLDTERKSSVIVEADRLQVPIVALVDSSMPWEYYKRIAYPVPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSL 203
           DSVQFVY  CN+ITKTFL EQK L
Sbjct: 181 DSVQFVYLFCNMITKTFLFEQKKL 201

[Close]

BLAST of Spo18444.1 vs. NCBI nr
Match: gi|629111800|gb|KCW76760.1| (hypothetical protein EUGRSUZ_D011171, partial [Eucalyptus grandis])

HSP 1 Score: 289.3 bits (739), Expect = 7.100e-75
Identity = 153/233 (65.67%), Postives = 179/233 (76.82%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRI-TAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISH 60
           MT+HS+VIQKLLSTNAHLGRR+ T HH K F YG+RNG +IIDSD+TL+ LRNA DFI+ 
Sbjct: 1   MTLHSIVIQKLLSTNAHLGRRVATPHHFKLFAYGTRNGMTIIDSDRTLVCLRNACDFIAA 60

Query: 61  LVRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQ-YWRLGGFLTNSSSPKKFRSR 120
           L R + RF+FVNTNPLFD+I + MTR+IG     SP     WR GGFLTNS SPKKFRSR
Sbjct: 61  LARQRGRFMFVNTNPLFDEIVEQMTRRIG---CYSPSGNALWRTGGFLTNSCSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKKICF P QPPDC+V+MD ERKSSVI EAA+LQIPV+ LVDSS+P E + KI YPIP N
Sbjct: 121 NKKICFGPTQPPDCLVVMDTERKSSVIQEAAKLQIPVVALVDSSMPWECYRKIQYPIPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATD 232
           DSVQFVY  CN+ITKTFLLEQK L    A+A D   I +++  ASA +  A +
Sbjct: 181 DSVQFVYLFCNMITKTFLLEQKKL----AAAKDRLGIASASAPASAPKPEARE 226

[Close]

BLAST of Spo18444.1 vs. NCBI nr
Match: gi|702320898|ref|XP_010052694.1| (PREDICTED: ribosomal protein S2, mitochondrial-like isoform X4 [Eucalyptus grandis])

HSP 1 Score: 289.3 bits (739), Expect = 7.100e-75
Identity = 153/233 (65.67%), Postives = 179/233 (76.82%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRI-TAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISH 60
           MT+HS+VIQKLLSTNAHLGRR+ T HH K F YG+RNG +IIDSD+TL+ LRNA DFI+ 
Sbjct: 1   MTLHSIVIQKLLSTNAHLGRRVATPHHFKLFAYGTRNGMTIIDSDRTLVCLRNACDFIAA 60

Query: 61  LVRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQ-YWRLGGFLTNSSSPKKFRSR 120
           L R + RF+FVNTNPLFD+I + MTR+IG     SP     WR GGFLTNS SPKKFRSR
Sbjct: 61  LARQRGRFMFVNTNPLFDEIVEQMTRRIG---CYSPSGNALWRTGGFLTNSCSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKKICF P QPPDC+V+MD ERKSSVI EAA+LQIPV+ LVDSS+P E + KI YPIP N
Sbjct: 121 NKKICFGPTQPPDCLVVMDTERKSSVIQEAAKLQIPVVALVDSSMPWECYRKIQYPIPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATD 232
           DSVQFVY  CN+ITKTFLLEQK L    A+A D   I +++  ASA +  A +
Sbjct: 181 DSVQFVYLFCNMITKTFLLEQKKL----AAAKDRLGIASASAPASAPKPEARE 226

[Close]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVJ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035710 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.900e-109
Identity = 205/263 (77.95%), Postives = 224/263 (85.17%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTI SV+IQKLLSTNAHLGRRITAHH KPF YG+RNG SIIDSDKTLISLRN+LDFISHL
Sbjct: 1   MTIQSVIIQKLLSTNAHLGRRITAHHFKPFTYGTRNGASIIDSDKTLISLRNSLDFISHL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNK 120
           VR K+RFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNS+SPKKFRSRNK
Sbjct: 61  VRAKSRFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSASPKKFRSRNK 120

Query: 121 KICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCNDS 180
           KICFAPAQPPDCVVI+DF++KSSVINEAARL IP+IGLVDSSVPREVF+KITYPIPCNDS
Sbjct: 121 KICFAPAQPPDCVVILDFDKKSSVINEAARLGIPIIGLVDSSVPREVFQKITYPIPCNDS 180

Query: 181 VQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATDASSTDVFAT 240
           VQFVY VCNLITKTFLLEQK+L+  DAS  DA                  +A + DV   
Sbjct: 181 VQFVYMVCNLITKTFLLEQKNLSFGDASTADAE-----------------NADNADV--- 240

Query: 241 DASLGEEATVTEDNQSSEDLKVV 264
           D  L  EA +T+DNQS+E++KVV
Sbjct: 241 DTDLSGEAKLTDDNQSAEEMKVV 243

[Close]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Match: A0A059CFQ0_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_D011171 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.900e-75
Identity = 153/233 (65.67%), Postives = 179/233 (76.82%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRI-TAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISH 60
           MT+HS+VIQKLLSTNAHLGRR+ T HH K F YG+RNG +IIDSD+TL+ LRNA DFI+ 
Sbjct: 1   MTLHSIVIQKLLSTNAHLGRRVATPHHFKLFAYGTRNGMTIIDSDRTLVCLRNACDFIAA 60

Query: 61  LVRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQ-YWRLGGFLTNSSSPKKFRSR 120
           L R + RF+FVNTNPLFD+I + MTR+IG     SP     WR GGFLTNS SPKKFRSR
Sbjct: 61  LARQRGRFMFVNTNPLFDEIVEQMTRRIG---CYSPSGNALWRTGGFLTNSCSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKKICF P QPPDC+V+MD ERKSSVI EAA+LQIPV+ LVDSS+P E + KI YPIP N
Sbjct: 121 NKKICFGPTQPPDCLVVMDTERKSSVIQEAAKLQIPVVALVDSSMPWECYRKIQYPIPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIASAIEASAIEASATD 232
           DSVQFVY  CN+ITKTFLLEQK L    A+A D   I +++  ASA +  A +
Sbjct: 181 DSVQFVYLFCNMITKTFLLEQKKL----AAAKDRLGIASASAPASAPKPEARE 226

[Close]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Match: F6H243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02680 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.400e-74
Identity = 142/204 (69.61%), Postives = 165/204 (80.88%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTIHS+VIQKLLSTNAH+GRR+  HH K + YG RNG ++IDSDKTLI +RNA DF++ L
Sbjct: 1   MTIHSLVIQKLLSTNAHMGRRLVEHHFKVYTYGFRNGCAVIDSDKTLICMRNACDFMASL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNK 120
           VR K RFLFVNTN LFD+I + MTRKIG     +P A  WRLGGFLTNSSSPKKFRSRNK
Sbjct: 61  VRQKGRFLFVNTNSLFDEIVEQMTRKIG---CFTPDAP-WRLGGFLTNSSSPKKFRSRNK 120

Query: 121 KICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCNDS 180
           KI F P+QPPDCVVI+D ERKSSVI EA+RL+IP++ +VD S+P + F+KI YPIP  DS
Sbjct: 121 KIIFGPSQPPDCVVILDTERKSSVIQEASRLEIPIVSVVDPSMPLDTFKKIAYPIPAKDS 180

Query: 181 VQFVYTVCNLITKTFLLEQKSLNL 205
           VQFVY  CNLITKTFL EQK + L
Sbjct: 181 VQFVYLFCNLITKTFLYEQKKMGL 200

[Close]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Match: B9I6E7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s06690g PE=4 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 2.100e-73
Identity = 138/204 (67.65%), Postives = 166/204 (81.37%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MT+HS++IQKLL+TNAH+GRR+ AHH K + YG RN  SIIDSDKTLI LRNA  FISHL
Sbjct: 1   MTLHSIIIQKLLTTNAHIGRRVAAHHLKIYTYGMRNQISIIDSDKTLICLRNAASFISHL 60

Query: 61  VRGK-ARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQY-WRLGGFLTNSSSPKKFRSR 120
            R K ARF+FVNTN LFD+I + MT+K+G     SP+    WR+GGFLTNS SPKKFRSR
Sbjct: 61  ARDKNARFMFVNTNLLFDEIVEQMTKKMG---IYSPRDNIMWRMGGFLTNSHSPKKFRSR 120

Query: 121 NKKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN 180
           NKK+CF P QPPDCVV++D ERKSSVI EA RLQ+P++ LVDS++P E+++KI YP+P N
Sbjct: 121 NKKVCFGPIQPPDCVVVLDTERKSSVILEADRLQVPIVALVDSNMPWEIYKKIAYPVPAN 180

Query: 181 DSVQFVYTVCNLITKTFLLEQKSL 203
           DSVQFVY  CN+ITKTFLLE+K L
Sbjct: 181 DSVQFVYLFCNIITKTFLLEKKKL 201

[Close]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Match: A0A067DRP4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006541mg PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.700e-72
Identity = 138/204 (67.65%), Postives = 164/204 (80.39%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MT+HS++IQKLLSTNAHLGRR+ AHH K + YG RN  +IIDSDKTLI LRNA  FIS L
Sbjct: 1   MTLHSIIIQKLLSTNAHLGRRVAAHHFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNK 120
            R +A F+FVNTNPLFD+I   MT+KIG   +       WR+GGFLTNSSSPKKFRSRNK
Sbjct: 61  ARQRAAFMFVNTNPLFDEIVLQMTQKIG--CYNPNMNALWRMGGFLTNSSSPKKFRSRNK 120

Query: 121 KICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCNDS 180
           KI F P + PDCVV++D ERKSSVI EAA+LQ+P++ LVDSS+P +V+ KITYP+P NDS
Sbjct: 121 KIRFGPTKLPDCVVVLDTERKSSVIMEAAKLQVPIVALVDSSMPLDVYSKITYPVPGNDS 180

Query: 181 VQFVYTVCNLITKTFLLEQKSLNL 205
           VQFVY +CN+ITKTFL+EQK L L
Sbjct: 181 VQFVYLLCNMITKTFLVEQKKLGL 202

[Close]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Match: RT02_ARATH (Ribosomal protein S2, mitochondrial OS=Arabidopsis thaliana GN=RPS2 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.500e-66
Identity = 125/219 (57.08%), Postives = 159/219 (72.60%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTIH+ VIQKLL+T AHLGRR   HH K + YG+RNG +IIDSDKTLI LR+A  F+++L
Sbjct: 1   MTIHAAVIQKLLNTGAHLGRRAAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVANL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQ-YWRLGGFLTNSSSPKKFRSRN 120
              +    FVNTNPLFD+I +  +R+I   S+   +A   W++GGFLTNS SPKKFRSR+
Sbjct: 61  AHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRH 120

Query: 121 KKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCND 180
           KK+CF P   PDCVV+ D ERKSSVI EA++LQIPV+ +VD +VP E FEKITYP+P  D
Sbjct: 121 KKLCFGPTTMPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARD 180

Query: 181 SVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIAS 219
           SV+FVY  CN+ITK F+ EQ  L + + S  D    +A+
Sbjct: 181 SVKFVYLFCNVITKCFVAEQMKLGIKEGSNEDLMKDLAA 219

[Close]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Match: RT02_MARPO (Ribosomal protein S2, mitochondrial OS=Marchantia polymorpha GN=RPS2 PE=3 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 7.600e-29
Identity = 87/226 (38.50%), Postives = 118/226 (52.21%), Query Frame = 1

		  
Query: 6   VVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHLVRGKA 65
           +VIQKLLSTNA+LG RI     + ++YG RN  +IID +KTLI LR   + I  ++  K 
Sbjct: 7   LVIQKLLSTNAYLGHRIPTSDFQGYLYGFRNEMAIIDLEKTLICLRRTCNLIGSIISAKG 66

Query: 66  RFLFVNTN------------------------PLFDDIFDHMTRKIGHGSFLSPQAQYWR 125
             L VNTN                          F   + HM +   H    S       
Sbjct: 67  HLLLVNTNPEYNKIIQQMAKKTNQSYINHKWIGGFLTNWKHMKKVKKHFQDFSAHPN--- 126

Query: 126 LGGFLTNSSSPKKFRSRNKKI--CFAPAQP---PDCVVIMDFERKSSVINEAARLQIPVI 185
           L    T  SSP  +  R KK+  CF        PDC+VI++  + S  I EA +LQIP++
Sbjct: 127 LKDAFT--SSPFDYFPRFKKMQKCFEGIMTHNIPDCLVIINANQNSMAILEANQLQIPIV 186

Query: 186 GLVDSSVPREVFEKITYPIPCN-DSVQFVYTVCNLITKTFLLEQKS 202
            LVDS++P  + + ITYP+P N DS++FVY  CNLITKT +L ++S
Sbjct: 187 ALVDSNIPNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVILSKRS 227

[Close]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Match: RT02_MOUSE (28S ribosomal protein S2, mitochondrial OS=Mus musculus GN=Mrps2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.200e-15
Identity = 60/196 (30.61%), Postives = 100/196 (51.02%), Query Frame = 1

		  
Query: 8   IQKLLSTNAHLGRRITAHH--CKPFIYGSRNGTSIIDSDKTLISLRNALDFISHLVRGKA 67
           ++ L     HLG +    H   +P+I+G+R G  IID D+T ++L+ AL+F +H+   K 
Sbjct: 78  VKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKG 137

Query: 68  RFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTNSSSPKKFRSRNKKICFA 127
             LFV+ N  F  + +   +  G  +      +Y++ GG LTN+           ++ F 
Sbjct: 138 IILFVSRNRQFSHLIETTAQACGEYA----HTRYFK-GGLLTNA-----------QLLFG 197

Query: 128 PA-QPPDCVVIMD-----FERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCN- 187
           P+ + PD ++ +      FE   +V  +AA++ IP +G+VD++    +   ITYPIP N 
Sbjct: 198 PSVRLPDLIIFLHTLNNVFEPHVAV-RDAAKMNIPTVGIVDTNCNPCL---ITYPIPGND 253

Query: 188 DSVQFVYTVCNLITKT 195
           DS Q +   C L   T
Sbjct: 258 DSPQAIQLFCKLFRTT 253

[Close]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Match: RT04_SCHPO (37S ribosomal protein mrp4, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrp4 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.400e-13
Identity = 63/214 (29.44%), Postives = 100/214 (46.73%), Query Frame = 1

		  
Query: 11  LLSTNAHLGRR--ITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHLVRGKARFL 70
           LLS+ AHLG    I   + +PFIYG R G  II  D+T++ LR A+  +  + +     L
Sbjct: 53  LLSSGAHLGHSTSIWNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIIL 112

Query: 71  FVNT-NPLFDDIFDHMTRKIGH--------GSFLSPQAQYWRLGGFLTNSSSPKKFRSRN 130
           F+ T N   D +     R  G+        G   + +    +LGG +    +  K    +
Sbjct: 113 FIGTRNGQKDSVVAAAKRARGYHIFDRWLPGLLTNAREVQGKLGGSILCKDNRGKLIQTD 172

Query: 131 KKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSV-PREVFEKITYPIPCN 190
           KK  +     PD +VI++     S   EA +  +P IG++D+   PR     +TYPIP N
Sbjct: 173 KKPSYV---FPDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPR----MVTYPIPAN 232

Query: 191 -DSVQFVYTVCNLITKTFLLEQKSLNLNDASATD 212
            DS++    +  L+++  + EQ+    N A   D
Sbjct: 233 DDSLRCTDLIAGLLSR--VAEQEYQKANQAFEKD 257

[Close]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Match: RS2_NOVAD (30S ribosomal protein S2 OS=Novosphingobium aromaticivorans (strain DSM 12444 / F199) GN=rpsB PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.000e-12
Identity = 58/208 (27.88%), Postives = 91/208 (43.75%), Query Frame = 1

		  
Query: 6   VVIQKLLSTNAHLGRRITAHH--CKPFIYGSRNGTSIIDSDKTLISLRNALDFISHLVRG 65
           V + +L+   AH G +    +   KP+I+G+RNG  I+D  +T+  +  AL+FIS  V+ 
Sbjct: 6   VTMHQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLMARALEFISATVQA 65

Query: 66  KARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQYWRLGGFLTN----SSSPKKFRSRN 125
             + LFV T     +      R  G          +  LGG LTN    S S K+F++  
Sbjct: 66  GGKVLFVGTKRQAQEPIAQAARASGQH-----YVNHRWLGGMLTNWKTISGSIKRFKALE 125

Query: 126 KKICFAPAQP----------------------------PDCVVIMDFERKSSVINEAARL 180
           +++    A                              PD + ++D  ++   I EA  L
Sbjct: 126 EQLAGDTAGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 185

[Close]

BLAST of Spo18444.1 vs. TAIR (Arabidopsis)
Match: AT3G03600.1 (ribosomal protein S2)

HSP 1 Score: 253.1 bits (645), Expect = 2.000e-67
Identity = 125/219 (57.08%), Postives = 159/219 (72.60%), Query Frame = 1

		  
Query: 1   MTIHSVVIQKLLSTNAHLGRRITAHHCKPFIYGSRNGTSIIDSDKTLISLRNALDFISHL 60
           MTIH+ VIQKLL+T AHLGRR   HH K + YG+RNG +IIDSDKTLI LR+A  F+++L
Sbjct: 1   MTIHAAVIQKLLNTGAHLGRRAAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVANL 60

Query: 61  VRGKARFLFVNTNPLFDDIFDHMTRKIGHGSFLSPQAQ-YWRLGGFLTNSSSPKKFRSRN 120
              +    FVNTNPLFD+I +  +R+I   S+   +A   W++GGFLTNS SPKKFRSR+
Sbjct: 61  AHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRH 120

Query: 121 KKICFAPAQPPDCVVIMDFERKSSVINEAARLQIPVIGLVDSSVPREVFEKITYPIPCND 180
           KK+CF P   PDCVV+ D ERKSSVI EA++LQIPV+ +VD +VP E FEKITYP+P  D
Sbjct: 121 KKLCFGPTTMPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARD 180

Query: 181 SVQFVYTVCNLITKTFLLEQKSLNLNDASATDASAIIAS 219
           SV+FVY  CN+ITK F+ EQ  L + + S  D    +A+
Sbjct: 181 SVKFVYLFCNVITKCFVAEQMKLGIKEGSNEDLMKDLAA 219

The following BLAST results are available for this feature:

BLAST of Spo18444.1 vs. NCBI nr
BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
BLAST of Spo18444.1 vs. TAIR (Arabidopsis)

BLAST of Spo18444.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|731318170\|ref\|XP_010669577.1\|	1.3e-108	77.9	PREDICTED: ribosomal protein S...	[more]
gi\|802585255\|ref\|XP_012070327.1\|	5.4e-75	70.5	PREDICTED: UTP--glucose-1-phos...	[more]
gi\|802585257\|ref\|XP_012070328.1\|	5.4e-75	70.5	PREDICTED: UTP--glucose-1-phos...	[more]
gi\|629111800\|gb\|KCW76760.1\|	7.1e-75	65.6	hypothetical protein EUGRSUZ_D...	[more]
gi\|702320898\|ref\|XP_010052694.1\|	7.1e-75	65.6	PREDICTED: ribosomal protein S...	[more]

BLAST of Spo18444.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0J8CVJ8_BETVU	8.9e-109	77.9	Uncharacterized protein OS=Bet...	[more]
A0A059CFQ0_EUCGR	4.9e-75	65.6	Uncharacterized protein (Fragm...	[more]
F6H243_VITVI	2.4e-74	69.6	Putative uncharacterized prote...	[more]
B9I6E7_POPTR	2.1e-73	67.6	Uncharacterized protein OS=Pop...	[more]
A0A067DRP4_CITSI	1.7e-72	67.6	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo18444.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RT02_ARATH	3.5e-66	57.0	Ribosomal protein S2, mitochon...	[more]
RT02_MARPO	7.6e-29	38.5	Ribosomal protein S2, mitochon...	[more]
RT02_MOUSE	8.2e-15	30.6	28S ribosomal protein S2, mito...	[more]
RT04_SCHPO	3.4e-13	29.4	37S ribosomal protein mrp4, mi...	[more]
RS2_NOVAD	5.0e-12	27.8	30S ribosomal protein S2 OS=No...	[more]

BLAST of Spo18444.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G03600.1	2.0e-67	57.0	ribosomal protein S2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 130..147 score: 1.3E-11coord: 8..26 score: 1.3E-11coord: 147..158 score: 1.3E-11coord: 37..46 score: 1.3E-11coord: 171..185 score: 1.3
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 11..113 score: 1.6E-14coord: 127..194 score: 3.5
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	HAMAP	MF_00291_B	Ribosomal_S2_B	coord: 4..246 score: 9
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	PANTHER	PTHR12534	30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR	coord: 3..243 score: 2.2
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 8..19 scor
IPR023591	Ribosomal protein S2, flavodoxin-like domain	unknown	SSF52313	Ribosomal protein S2	coord: 8..200 score: 4.58
None	No IPR available	GENE3D	3.40.50.10490		coord: 25..212 score: 1.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0019408	dolichol biosynthetic process
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006011	UDP-glucose metabolic process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity