Spo18471.1 (mRNA) | SpinachBase

Overview


Name	Spo18471.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chaperone protein dnaJ-related protein
Location	chr1 : 32892118 .. 32896553 (+)
Sequence length	1651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTTTCGATGATCTCCGTGACCTCTTTTTGTACTACTCAATCCAACATCCACCTCTTTCTCTCGCTTTCCAATTGCTACTTCGTTCCTCGCGTCCCCCCAATCTCTAACACGGTCCGCTCCAACAAGGAGCGGGCCGTGCTCGGTCGCGTCAGCAACCACGAAATTCATCAATATATCTTCACAATTACGCATATTATCAACCATGCCCCTCAACTCACTAAACTGTCCCTCTAACCCCTCACTCCCACAACTATACAAATACAAGTAGTCAACTTTTAACATCAAAAACTTAGTCAACACTATAGAATATCTATCTTGATGGACGGTGTAGATCCATTCCTTCCTCCTTAAATCCAAACCGTGCGATCTCGCAAATAACCCAATCAAACGGTCCTGATTCACCTGCCAAATCCTGAACGCAAACTCGATTGACTTGGGGTCCACCTCAACATCATCGTCACATATTAGAACCCCACGTGTCCTGATCCAATGGCGCGGAAGGAACCTTGAATTCAAACTGTTGGATTCTTGACGGAGCACGGTAACAGGCGCACCAGCGGAGTAGAGCAGCGATAAGTTCGAGGAGAGAGAATCTAGGGTTTCCCCCGGTGTCGATGGATTTCCCCAGAGAACTACGACGGCGGAGACAACCGGCGATGAAGCGTAAATTCCAGCGATCGTACTCAGGAGAGAGATACGGAGCTCCGAATACCCGTTGATGAGGACCGTTAGCTGATCGGATCGTAGTGATAGTGGATTTGGTAGGGTTCTTCGATCGCACGGGTTTGAATTCGGGGAGAGAGAACGAAATGAGAGAGTTGAGAGCGGGAGTAAGGTGATGATGACATAGAGGAGAGAGAAAATGTGTCTTCTCCTGGCTTCCATTGGAGAGCAGAGGAGAGGGAATTTCTTTTTCCGCTATAGGGGCGGAAGTCCAAAAGTATTGTTTGGCCGGGTTTTGAGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGCGATTGATCAATCTCGGATATTAGCAAAAACTATCACTTCTCAGAGTTGTAATTTTGTGTGGTGGAATCGTAATGGCAATGTGGTGAATAATGGTGAAGATGAAGGGTGATATTTGGCGGGGTTTTATGTGAATGTTAGCAGTTAGTACTGGTTGGTATTTGATGATTTTGAAGAAACTGATGGGAACAACAATGGCGGCTCTTTTGCCAAATGTGAAGTTTACTTTCTTGCCAAAAGGTCCATTATCTTCCAAATCAAATATAAAGAGGGTGATGGGCTTAAAGCCTGCGTTTTGCTCAGCTGTTCAGCAAGTGGAACAACAGGTATATCTCTCCTTTCTCTACACCTTTCTCTATTTGAAGCAATGAACTATATATGTTGTACCAAGAATTATGATTAAAAGCAAGTGAACTTTGCTTGGGTAGCTTATGAATGAAGGAAGTGTTCTTTTGAAATTAGGATTATGTACATTTTTTTAATGTACCTGCTAATTGGCTAATTATAGTTTACTCAATTGCTTGACAAATCATTGTTTGTGGGTGGTGGTGTTCTTGTGAGCGGCTCAAAATTGTCAGGAAGGCTGAAAGTTGGAATTTTGAAATGAGGGATGGTTTATATAGACTAAATAATGTACCAATATTGCTGATTGTTAGTGAGGGCCTGCGGGGCTTTAGGTAAGGGATCTTAGTAAGTGGCTCTAAACTTGAGTTGAGATCATGGCAAAGGAATGCATTTAAAAAGTTTAGTTCCTTACTTTCTCAAGTGTATGTAATGTGGCAAGTCACAACAATAAATAGTTAAGGAAAGTAGATAGTTTATTTATTTGTTTTCCGGAATGTGGGAAGTAGAAGTGATTATATAAATTTACGAGTAGTATGGAGGGAGAATATATGCTTGCTTGGTTAACAGTCGAGACATTTTAAGAATAGTTGGCTACTTGGCTATAGCTTAGAGCCTTAGATTGCTGCCCTGCTTGCCATATTTGGACTTGGACAAGGATATTACTCGTATTTAGGTTTATGTTGATATGGTTGTTATTGTTGCGACCATAGCGAGATGGTATAGTATTTGTACGAGTATCTTTTTGGATTATAATAGAGACATTACCACCCACCAGGATATCCCATAGCTGGGATGATGCTGGAGCTGGGGTCAGACTGCATGTACACCTGGGGAGGTTCTCCAAATACAAAGTCCTTTGCAAAAAGATGAAAGTAGTAAAGTAGCAGAAAGGCAACAATTTTTATAGGTTCAACATGTTTCATTCAGAATCTTTATTGACAGGTTTTTCTTAGTTCGAAGCTTAAACCCTGTTTCTATAGTAGTGAGAACTTTGATTGTGTGGAAGATTAGACACATGTTTCCGGGAGTATAACTGTGTAAGTTTGTGAAGTCCATAAACATCAGGGAAGGTCATGCCCTGCTATGTGCATCCTCCATGTGAATAAAATTTTGGCTTTTTGTACAGAAGTTCTTGGAGCCTTGAACTACTACTCTTCTTTCTTTTGCATAGCTCTCTGTATTTGTTATATCGACTTAATTATATAACTTCAAAGTGGCTTCTAAAATTCACTTCATGTACAAGAGAAGGTGTTAAAGGTTCATTGAGAATGAAACTAATTTCAAAGTTTATTACTTGTACAAGATCATAAATCTTTTTACCCAAAACTTGTTCCCAAAGGAAAAGTGATCTCAAACTACAGCTATATTCTCATCTTATCTCCAAAACACTATTACCGCAACTTCCTATTCTCTAGTTATTATTGAGATGACGGTCAAAACCTATTGGTCTCAAGCGACATCTTTAAGCAGAATGTAAATATTCTAATTACCGCATCTTGTTTGACTGTAGGAAAGTTGGAAGTACTGTAGTTTATTTCTGTTGAGCTGTATGTCTGTTGTTCCATTGATGAATTTTGTTTTTCTGTACACTTTGTTACCTTTCTCTTTAAATCCTAATTTAACTTGAACTTTTTAGGAGTCGAAGGTTGGAATTCTATGTGAACCTTGTAATGGAACAGGATGGCTACTTTGTGATTTCTGCAACGGACAAAAAACTAATGTGAAGTCCCCAACTAATAAGATCTACCGTCGATGTCCATCATGCAAAGCGGTAAGTATTAATGAACATTGCTATGTTACCATGTTAGAAAAACTCAAGACATGTTTTTGCTTGATTATATAAAGCACACATAAGATGATGTCTAGCTTTTGATTAATATCTCACATGTGAGACAATGAAGTGAAACCATAGTGGAGGCTTGCCCGTTATCTACATGTTAACCTCCAATGAGAGTATCAGCTGGAAAATTCACCATCTAGCATTAGTCCCCGCCTACTCCCTCACCGTTTTACACTTTCCACTCCTCCAGTGGTATCTTAAGAGTTAACTTAGTTTTAAGTAAAAATGTTCACACATGATCCCTCTGTTTACTTCTTTTTTGGTGCCTTACTTTCGGTCTATTCATTTACGCTATATTGGGATAATGAGATATGGAAGGAAGGGGAGGAAAGGGAGAGTGATTTATCCAGTTTCCTATTTGGATAATAATTAGGTTTGACTGGGGAACGGAAAGGAATAGGGGTTTCTATCTTCCTTCCCTCTTGATAGACCAAATCCTTCGCATTTTGAAATGATTCAGATTGAAAATAAATCCGCTTCTCTTGCTTCCCCTCATCTTTTGTGCTGTCAAAATACAAGGGTGGGGATTAGGGTTGCGTTGGCAGGGGGTGAGTGGGGAGCAGGGTAAGGTGGTGTAAGGAGGAAGGAGGGTAGTTTAGGATCCCTTATTGTAAGGGAGTGGTGTTAGTAAAAAGTTGGCAGTTTATAGTCGTTCAATTATTATTGGGTTGTCCGGAAAGATGTTAATGCTCAGAATTCGGACTTTGTTTTTCTTGCAAAATTTTAGTTTAAGGGAATTTCTCCCTCATTATCTTCTGCATGTTGATCGAGGCAGTTTCCCAAGATTTTGATCAACTGTAACATATCTGTCAGATAAACATGTCGTCGTCTTTGTTTTATTCCCTTACTCTCTTTTTCTCACTTAGGCTAGGATGATGGCTTTCTTCAAAGACTTCAGTAGGAGTCTGTCTGAAACGTAAATAGCTTTGACGTGAAACATGTCCTGTGAAGGGTGCCATAGATAGTCTTGATGTCCTCCATGTGCCCCCTCTTAATTATGGTGTTCTTCATAATTTCTTGATAAGATTGCCATGTAACTTTTCAATCGAATTTGCTTGCAGACTGGATATACATTGTGCTCGAAGTGTAAAGTATACAAATGTGTCACATTTCCAGATGAGAGTGATGGTGAACAGCTTTCATTTTGA

mRNA sequence

TTCTCTTTCGATGATCTCCGTGACCTCTTTTTGTACTACTCAATCCAACATCCACCTCTTTCTCTCGCTTTCCAATTGCTACTTCGTTCCTCGCGTCCCCCCAATCTCTAACACGGTCCGCTCCAACAAGGAGCGGGCCGTGCTCGGTCGCGTCAGCAACCACGAAATTCATCAATATATCTTCACAATTACGCATATTATCAACCATGCCCCTCAACTCACTAAACTGTCCCTCTAACCCCTCACTCCCACAACTATACAAATACAAGTAGTCAACTTTTAACATCAAAAACTTAGTCAACACTATAGAATATCTATCTTGATGGACGGTGTAGATCCATTCCTTCCTCCTTAAATCCAAACCGTGCGATCTCGCAAATAACCCAATCAAACGGTCCTGATTCACCTGCCAAATCCTGAACGCAAACTCGATTGACTTGGGGTCCACCTCAACATCATCGTCACATATTAGAACCCCACGTGTCCTGATCCAATGGCGCGGAAGGAACCTTGAATTCAAACTGTTGGATTCTTGACGGAGCACGGTAACAGGCGCACCAGCGGAGTAGAGCAGCGATAAGTTCGAGGAGAGAGAATCTAGGGTTTCCCCCGGTGTCGATGGATTTCCCCAGAGAACTACGACGGCGGAGACAACCGGCGATGAAGCGTAAATTCCAGCGATCGTACTCAGGAGAGAGATACGGAGCTCCGAATACCCGTTGATGAGGACCGTTAGCTGATCGGATCGTAGTGATAGTGGATTTGGTAGGGTTCTTCGATCGCACGGGTTTGAATTCGGGGAGAGAGAACGAAATGAGAGAGTTGAGAGCGGGAGTAAGGTGATGATGACATAGAGGAGAGAGAAAATGTGTCTTCTCCTGGCTTCCATTGGAGAGCAGAGGAGAGGGAATTTCTTTTTCCGCTATAGGGGCGGAAGTCCAAAAGTATTGTTTGGCCGGGTTTTGAGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGTATGCGATTGATCAATCTCGGATATTAGCAAAAACTATCACTTCTCAGAGTTGTAATTTTGTGTGGTGGAATCGTAATGGCAATGTGGTGAATAATGGTGAAGATGAAGGGTGATATTTGGCGGGGTTTTATGTGAATGTTAGCAGTTAGTACTGGTTGGTATTTGATGATTTTGAAGAAACTGATGGGAACAACAATGGCGGCTCTTTTGCCAAATGTGAAGTTTACTTTCTTGCCAAAAGGTCCATTATCTTCCAAATCAAATATAAAGAGGGTGATGGGCTTAAAGCCTGCGTTTTGCTCAGCTGTTCAGCAAGTGGAACAACAGGAGTCGAAGGTTGGAATTCTATGTGAACCTTGTAATGGAACAGGATGGCTACTTTGTGATTTCTGCAACGGACAAAAAACTAATGTGAAGTCCCCAACTAATAAGATCTACCGTCGATGTCCATCATGCAAAGCGACTGGATATACATTGTGCTCGAAGTGTAAAGTATACAAATGTGTCACATTTCCAGATGAGAGTGATGGTGAACAGCTTTCATTTTGA

Coding sequence (CDS)

ATGTTAGCAGTTAGTACTGGTTGGTATTTGATGATTTTGAAGAAACTGATGGGAACAACAATGGCGGCTCTTTTGCCAAATGTGAAGTTTACTTTCTTGCCAAAAGGTCCATTATCTTCCAAATCAAATATAAAGAGGGTGATGGGCTTAAAGCCTGCGTTTTGCTCAGCTGTTCAGCAAGTGGAACAACAGGAGTCGAAGGTTGGAATTCTATGTGAACCTTGTAATGGAACAGGATGGCTACTTTGTGATTTCTGCAACGGACAAAAAACTAATGTGAAGTCCCCAACTAATAAGATCTACCGTCGATGTCCATCATGCAAAGCGACTGGATATACATTGTGCTCGAAGTGTAAAGTATACAAATGTGTCACATTTCCAGATGAGAGTGATGGTGAACAGCTTTCATTTTGA

Protein sequence

MLAVSTGWYLMILKKLMGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCNGTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18471	Spo18471	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18471.1	Spo18471.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18471.1.exon.1	Spo18471.1.exon.1	exon
Spo18471.1.exon.2	Spo18471.1.exon.2	exon
Spo18471.1.exon.3	Spo18471.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18471.1.utr5p.1	Spo18471.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18471.1.CDS.1	Spo18471.1.CDS.1	CDS
Spo18471.1.CDS.2	Spo18471.1.CDS.2	CDS
Spo18471.1.CDS.3	Spo18471.1.CDS.3	CDS

Homology

[Close]

BLAST of Spo18471.1 vs. NCBI nr
Match: gi|902192614|gb|KNA12087.1| (hypothetical protein SOVF_129160 [Spinacia oleracea])

HSP 1 Score: 260.0 bits (663), Expect = 2.300e-66
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


		  
Query: 17  MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN 76
           MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN
Sbjct: 1   MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN 60

Query: 77  GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS 136
           GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS
Sbjct: 61  GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS 120

Query: 137 F 138
           F
Sbjct: 121 F 121

[Close]

BLAST of Spo18471.1 vs. NCBI nr
Match: gi|731318011|ref|XP_010669492.1| (PREDICTED: uncharacterized protein LOC104886708 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.0 bits (515), Expect = 3.400e-49
Identity = 99/124 (79.84%), Postives = 107/124 (86.29%), Query Frame = 1


		  
Query: 17  MGTTMAALLP--NVKFTFLPKGPLSSKSNI-KRVMGLKPAFCSAVQQVEQQESKVGILCE 76
           M  TMA +LP  +VKF  LPK  +SS SN  KRVM LKP FCSAVQQVEQQE KVGILCE
Sbjct: 1   MTLTMAVVLPTVSVKFNLLPK--VSSSSNFSKRVMMLKPVFCSAVQQVEQQEEKVGILCE 60

Query: 77  PCNGTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGE 136
           PCNG+GWLLCDFCNGQKTNVKS TNKIYRRCPSCKATGY LC+KCKV+KCVTFPD+SDG+
Sbjct: 61  PCNGSGWLLCDFCNGQKTNVKSQTNKIYRRCPSCKATGYILCAKCKVFKCVTFPDQSDGD 120

Query: 137 QLSF 138
           QLSF
Sbjct: 121 QLSF 122

[Close]

BLAST of Spo18471.1 vs. NCBI nr
Match: gi|731385296|ref|XP_002283165.2| (PREDICTED: uncharacterized protein LOC100249288 isoform X1 [Vitis vinifera])

HSP 1 Score: 157.1 bits (396), Expect = 2.100e-35
Identity = 72/117 (61.54%), Postives = 89/117 (76.07%), Query Frame = 1


		  
Query: 21  MAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCNGTGW 80
           MA  +   KF+FLP  P SS S +  +  LKP  C+ +QQ+++Q   VGI+CEPCNG GW
Sbjct: 1   MAMPIATAKFSFLPMLPSSSSSTMG-MRFLKPPHCAPLQQIQEQID-VGIMCEPCNGKGW 60

Query: 81  LLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF 138
           LLCDFC GQKTNVK+  N+IYRRCPSC+A GY LCSKCKV+KCVTFP+  DGE+L+F
Sbjct: 61  LLCDFCKGQKTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPNYDDGEELNF 115

[Close]

BLAST of Spo18471.1 vs. NCBI nr
Match: gi|1009156344|ref|XP_015896200.1| (PREDICTED: uncharacterized protein LOC107429936 [Ziziphus jujuba])

HSP 1 Score: 151.8 bits (382), Expect = 9.000e-34
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1


		  
Query: 21  MAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQV---EQQESKVGILCEPCNG 80
           MA  +P++K  F     L+ K++  R   LKPA CS +QQV   E+Q +  GILCEPCNG
Sbjct: 1   MAMAMPSLKLNF--SRILAPKTSSSRTF-LKPARCSPLQQVRVQEKQPADAGILCEPCNG 60

Query: 81  TGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF 138
            GWL+CDFC GQKTNVK+  N+IYRRCPSC+A GY LCS+CKV+KCVTFP+ +DGE LSF
Sbjct: 61  KGWLVCDFCRGQKTNVKADNNRIYRRCPSCRAIGYVLCSRCKVFKCVTFPNYNDGEDLSF 117

[Close]

BLAST of Spo18471.1 vs. NCBI nr
Match: gi|296081792|emb|CBI20797.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 148.7 bits (374), Expect = 7.600e-33
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 1


		  
Query: 39  SSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCNGTGWLLCDFCNGQKTNVKSPTN 98
           SS S+   +  LKP  C+ +QQ+++Q   VGI+CEPCNG GWLLCDFC GQKTNVK+  N
Sbjct: 4   SSSSSTMGMRFLKPPHCAPLQQIQEQID-VGIMCEPCNGKGWLLCDFCKGQKTNVKAENN 63

Query: 99  KIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF 138
           +IYRRCPSC+A GY LCSKCKV+KCVTFP+  DGE+L+F
Sbjct: 64  RIYRRCPSCRAIGYVLCSKCKVFKCVTFPNYDDGEELNF 101

[Close]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXU9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129160 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.600e-66
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


		  
Query: 17  MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN 76
           MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN
Sbjct: 1   MGTTMAALLPNVKFTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCN 60

Query: 77  GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS 136
           GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS
Sbjct: 61  GTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLS 120

Query: 137 F 138
           F
Sbjct: 121 F 121

[Close]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW00_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035180 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.400e-49
Identity = 99/124 (79.84%), Postives = 107/124 (86.29%), Query Frame = 1


		  
Query: 17  MGTTMAALLP--NVKFTFLPKGPLSSKSNI-KRVMGLKPAFCSAVQQVEQQESKVGILCE 76
           M  TMA +LP  +VKF  LPK  +SS SN  KRVM LKP FCSAVQQVEQQE KVGILCE
Sbjct: 1   MTLTMAVVLPTVSVKFNLLPK--VSSSSNFSKRVMMLKPVFCSAVQQVEQQEEKVGILCE 60

Query: 77  PCNGTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGE 136
           PCNG+GWLLCDFCNGQKTNVKS TNKIYRRCPSCKATGY LC+KCKV+KCVTFPD+SDG+
Sbjct: 61  PCNGSGWLLCDFCNGQKTNVKSQTNKIYRRCPSCKATGYILCAKCKVFKCVTFPDQSDGD 120

Query: 137 QLSF 138
           QLSF
Sbjct: 121 QLSF 122

[Close]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Match: D7SU48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02810 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.300e-33
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 1


		  
Query: 39  SSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCNGTGWLLCDFCNGQKTNVKSPTN 98
           SS S+   +  LKP  C+ +QQ+++Q   VGI+CEPCNG GWLLCDFC GQKTNVK+  N
Sbjct: 4   SSSSSTMGMRFLKPPHCAPLQQIQEQID-VGIMCEPCNGKGWLLCDFCKGQKTNVKAENN 63

Query: 99  KIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF 138
           +IYRRCPSC+A GY LCSKCKV+KCVTFP+  DGE+L+F
Sbjct: 64  RIYRRCPSCRAIGYVLCSKCKVFKCVTFPNYDDGEELNF 101

[Close]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Match: M1CW55_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029583 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.800e-32
Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 1


		  
Query: 51  KPAFCSAVQQVEQQESKVGILCEPCNGTGWLLCDFCNGQKTNVKSPTNKIYRRCPSCKAT 110
           KP  C  V+Q    + + GILCEPC GTGWLLCDFC GQKTNVKS TNKIYRRCPSC+AT
Sbjct: 36  KPVRCFPVEQ----QVEAGILCEPCGGTGWLLCDFCKGQKTNVKSETNKIYRRCPSCRAT 95

Query: 111 GYTLCSKCKVYKCVTFPDESDGEQLSF 138
           GY LCSKCKV+KCVTFP++ DGE LSF
Sbjct: 96  GYLLCSKCKVFKCVTFPNDEDGEVLSF 118

[Close]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Match: V4TS26_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010266mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.200e-31
Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 1


		  
Query: 21  MAALLPNVK-FTFLPKGPLSSKSNIKRVMGLKPAFCSAVQQVEQQESKVGILCEPCNGTG 80
           + A L  VK F+ +P    SS+S     + LKPA C+ V+Q    E +VGI+CE CNG G
Sbjct: 8   VVASLAKVKLFSIMPSSSSSSRSRPSHSLKLKPALCAPVKQ----EVEVGIMCESCNGKG 67

Query: 81  WLLCDFCNGQKTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGE 134
           WL+CDFC GQKTNVK+  N+IYRRCP+C+A GY LCSKCKV+KCVTFP+  DGE
Sbjct: 68  WLVCDFCGGQKTNVKAQNNRIYRRCPTCRAVGYVLCSKCKVFKCVTFPNYDDGE 117

[Close]

BLAST of Spo18471.1 vs. TAIR (Arabidopsis)
Match: AT2G24395.1 (chaperone protein dnaJ-related)

HSP 1 Score: 133.3 bits (334), Expect = 1.200e-31
Identity = 63/108 (58.33%), Postives = 75/108 (69.44%), Query Frame = 1


		  
Query: 37  PLSSKSNIKRVMGLKPAFCSAVQQVEQQ--ESKVG-----ILCEPCNGTGWLLCDFCNGQ 96
           P SS S  K+    KP  C  +Q+ E Q  +S+ G     ILCE CNG GWLLCDFC GQ
Sbjct: 25  PASSTSRRKQRRLFKPFRCVPLQEQEPQLDQSQQGDDNAVILCEDCNGKGWLLCDFCKGQ 84

Query: 97  KTNVKSPTNKIYRRCPSCKATGYTLCSKCKVYKCVTFPDESDGEQLSF 138
           KTNVKS  N+IYRRCP+CKA G+ LC KCKV+KCVTFP+  DG++L F
Sbjct: 85  KTNVKSENNRIYRRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGDELLF 132

The following BLAST results are available for this feature:

BLAST of Spo18471.1 vs. NCBI nr
BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
BLAST of Spo18471.1 vs. ExPASy Swiss-Prot
BLAST of Spo18471.1 vs. TAIR (Arabidopsis)

BLAST of Spo18471.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902192614\|gb\|KNA12087.1\|	2.3e-66	100.	hypothetical protein SOVF_1291...	[more]
gi\|731318011\|ref\|XP_010669492.1\|	3.4e-49	79.8	PREDICTED: uncharacterized pro...	[more]
gi\|731385296\|ref\|XP_002283165.2\|	2.1e-35	61.5	PREDICTED: uncharacterized pro...	[more]
gi\|1009156344\|ref\|XP_015896200.1\|	9.0e-34	60.0	PREDICTED: uncharacterized pro...	[more]
gi\|296081792\|emb\|CBI20797.3\|	7.6e-33	64.6	unnamed protein product [Vitis...	[more]

BLAST of Spo18471.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXU9_SPIOL	1.6e-66	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CW00_BETVU	2.4e-49	79.8	Uncharacterized protein OS=Bet...	[more]
D7SU48_VITVI	5.3e-33	64.6	Putative uncharacterized prote...	[more]
M1CW55_SOLTU	5.8e-32	73.5	Uncharacterized protein OS=Sol...	[more]
V4TS26_9ROSI	2.2e-31	57.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo18471.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo18471.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G24395.1	1.2e-31	58.3	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001305	Heat shock protein DnaJ, cysteine-rich domain	unknown	SSF57938	DnaJ/Hsp40 cysteine-rich domain	coord: 66..119 score: 9.8
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 70..118 score: 2.7
None	No IPR available	PANTHER	PTHR10168:SF87	SUBFAMILY NOT NAMED	coord: 70..118 score: 2.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding