Spo18549.1 (mRNA) | SpinachBase

Overview


Name	Spo18549.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Translocation protein SEC63-like protein
Location	chr5 : 67863488 .. 67867251 (+)
Sequence length	984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACTGCTACTCAAATCGTTGTTCCGTCGTCAATATTACTTGCAGAAATCTACTATTTTTTAAACCTAAATCCAAGGAGATTGTTGTATGTTGAAATTATTCACTCCAGGTAATTTTTAATTTATTTTACTGCAAATTTAAGGATTTATCTTCAATTTTTCTAGGATCGGCACCCTTTGAGATTAATTTGATTCCCTTTTGTTTGGTTCCTGGTGAATTTTATAGATCTGGTGTTGTGTTTTTGATTTTTTTCTTTTATTTTTTTCAAAAAAATTGGTTTTTTCTCTTCAATTTATCGAATATTCGGAAATTAGGGTTATTGATTTTGTTTTTTATTTTGGTTTGATTCACGATGATGAGGAGGGACCATGGAAAATCCGTAGATTACTTATTATGAAGGCAAACCTGATATTACAGATGCTCCAAAGACCAAGTTCAGGTTTGTTGGGTTTTTAATATTTATTTTTTTGCCATTTTTTCAAGCTAATAGCTACTGACAATGCTGATTTTCCTTAAGAATTTTACTTTGTACTTACATTAAATAAATGATTTGCAATTGCAATTGTTGCATAAAATGGTGGGTGTTTGGGGGGCAATGTTGAATCTGCCTATTTCTTGCTCTATTGATGTGTAAGCTTACGAGTCGGTTTTTGGTTTTAATCTGTTCTACCGGATCGTAATGATTGAACTAGTGGGTCCTGATGTTTCTGGACTATAGCATCGGGCAACTTTGTTAGTCGGGAGATGCATTTCAATTGAATTCATAGACATTGAAAACATTGTAGTTTATTGTTTTTGCCGTTGCTAAGAAGGGTCAGGGGTTAGTAATTCTAGCTTGTTGAACTTTCTCTGTTGTATTCGTTACTTCATAACTATCTTTAACACTTGAACATACTTGTTCAGGTGATACATTTTTCACTAGACTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGGTATAATAATAGGTGCCTTGATTTTCTTTTTCTTATATGTTTGATTGGGTATTTTACTACAAGTATTATTTATTTCAGTATCCTAGATTTTCTCAAAGATAAAAATATATGGCTTTAGAGAATGTTTAAAGTCCACACACTATTACACTACTACAAAAGATGTTATATCTCGACGATGTTGAAGACCGTCAGCATGGAATATGACATTGCAGAAATGTGATCTATTGGTGCCCTGTTTGGCTGTTTGTGTTAATTTTGGTAGCTGCTTGTTTTAGGCCTTGTTATCATGAACTGTCTAGGTTGAGTATTCTGACTACTTAATTGGATTTCTGTCTCTTTCTTTGCACCATTTTGGTAGTAGATTTTTCCTGTTGATATATATATTTTTTGTTAGTAGGTTGAGTAAACATGATATTGCTTGGGCTTATTGATTTGATCGTAGGAAAAATAACTATTTTATATTTTAGTATATTTGGATGGTTGGTCACTATAGGTCGATTAAATATCGTTAATTTTTATACTCTCATTTACATTTTCTACCATGTGCCTACAAATCACATATATTTCCTGGTAGACACAATTGTTAATGAAATAACTTACATATCAAATTTCTTTTATGGTAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTAATATAAACTTTCCAATGTTCTAGCACTTAAACAAATGAAATTATGACTGCATGCCATGAACCATTGACATTCTGAAACCCGAGGATTTGAGTATTAACAGCCTACATTCTTCTGAACCGTTGATGATGTTGAATTATTGATGAGTGCTTTTTTATTTTTTATGGCCTATCATTCTTTGAAAGAATTCCAATATATGCTGATGATAACCTTTAACTTTGGAATAATTTAGCAGTTTCTGTATTTTTCTCTCTTTTTTTTATTCAAAGTTATTTCAAGTTTCTCAGGGGTAACTATGTGACATAGCTTTATTTATCATGGAAACAAAGTGACTTGTACGGCAAAACTTGGAGTTGTTTTATAGCATTGCTGCCATCCTGATATTTAAACCCTTGTGGAAACTAAACTTCTTTGGAGGAATATTGATTAATGAGCCCACTTTGTTCTAAATATTTAATAGTTCAGAAAAGTCATCTTTTTCTTTCATTATCTCTATTTTGGTTTAACATAGAATTGTCTTTCTAGAAATGGTACAAAGCTACCAAAATCAATATGAAATAAACCCCTTTTGGAAAGGGGCGCGCAGCACTCCAGAGGTTGGATTTTTCTAAGTTAAAACTAAAATCAGGATTGTTAAAAGAGGATGAAAGTTGGGATTCAAAGTAGCCTTATTTATGCAAGTGCTCAATTAAGGTAGTGATTACAAAGTCTGTAAGTCCTTAATCTAGTGCGAACTCAATAATAATCAAGTTGCGCAGGGCATGAAGTTTACAAACTTTTTTCCTTACTAATTTTGGAAGTGGACTAAGTTTTTAGGATGGAAGGAGTAGTAGATAGATCATACATGTTCTACTAAGTTGCCTCTTTACAGATTAAACTCATGTCTGTCATCAAATGCTGGTTCATATGTCAACTTTACAATCCTGGCATATTTCATGATTGTTATGCCAGTCTCATTTAGTCCTTCTTTTAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTTAGTCTTCCACATCTAACTTGTCATAGTTCTAATCTTGCATGAGTGATAGTTTCCGTAAAGGTAGTGCTATACGTGGTAATTTGATTGAGCGAACAGTCCGATCTATTGATTGCTCCTAGATTTTGGTCTTTGTCATGATCATGTTTGATTCTGAGCTAGGCCTTTGTTGGTTGTATAGTTGGTTTTAGAATACTCAGATGCAGATAGACAAAATTCAGGAGTTGATATCTGCAGGATCGACACTCCTTCATGTTACATTCTCATTATCCAATTTCAAAGAATGTGTAGAATGAATACTGAATCAAGTGGTGATGCATAGCTCCTTCAACTATGAAGCTGATATTTTTGAACTTTGTATTGAGTGGCCTTTGTTTTGAAGATGACATTTTAGAATAATAAGTTGGATGACATTTTTTCTGCTGCTTGGTTGTTGTTTTGGTTGCGTGTTTCTGTCTTCTGCAGGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAACTTTTTCTGTTGTTTCGTTGTTTAGATACTTTTGTTCATACCTTTTGGTATTAAATTTGTATTTTGGAGATATATAGTTAGCTAATTTAATAGTTTTGACATGTGTAAACTTAATTTGATGATATGATATGACAATTTGGAGCGAGCTAATACGTATTATTACATATATATATATAG

mRNA sequence

ATGGAAGACTGCTACTCAAATCGTTGTTCCGTCGTCAATATTACTTGCAGAAATCTACTATTTTTTAAACCTAAATCCAAGGAGATTGTTGTATGATCGGCACCCTTTGAGATTAATTTGATTCCCTTTTGTTTGGTTCCTGGTGAATTTTATAGATCTGGTGTTGTATGCTCCAAAGACCAAGTTCAGGTGATACATTTTTCACTAGACTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAACTTTTTCTGTTGTTTCGTTGTTTAGATACTTTTGTTCATACCTTTTGGTATTAAATTTGTATTTTGGAGATATATAGTTAGCTAATTTAATAGTTTTGACATGTGTAAACTTAATTTGATGATATGATATGACAATTTGGAGCGAGCTAATACGTATTATTACATATATATATATAG

Coding sequence (CDS)

ATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTTATGGTGATCTGAAACGTGTCCTGGAACTTGCACCTCGTCTACTTGAGGAGTTAATGAAGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCATATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTGGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGCACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTGTTTCAATGTCATGTTATAGTAGTGTGTTTGGTGTTGTTTTCAGCTGCACAGGTGCTGCTTCTTGCTGTGTGCAGGGTGTGGGTTGTGCTCCTGATGTGTGCAGGGTGTTCTGCAGGGAGTCCAGGTCTACAGGGAGTGTGGTGTTCGATTGCTGCTGTGTGCAATCTTATGTTGCGTACCCTTTTATTGCGTTTGGTTGTTAGGGAGTGGTCTGTACTCCTCTAA

Protein sequence

MVLSVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIFHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFLDILDFLMLFQCHVIVVCLVLFSAAQVLLLAVCRVWVVLLMCAGCSAGSPGLQGVWCSIAAVCNLMLRTLLLRLVVREWSVLL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18549	Spo18549	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18549.1	Spo18549.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18549.1.exon.1	Spo18549.1.exon.1	exon
Spo18549.1.exon.2	Spo18549.1.exon.2	exon
Spo18549.1.exon.3	Spo18549.1.exon.3	exon
Spo18549.1.exon.4	Spo18549.1.exon.4	exon
Spo18549.1.exon.5	Spo18549.1.exon.5	exon
Spo18549.1.exon.6	Spo18549.1.exon.6	exon
Spo18549.1.exon.7	Spo18549.1.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18549.1.utr5p.1	Spo18549.1.utr5p.1	five_prime_UTR
Spo18549.1.utr5p.2	Spo18549.1.utr5p.2	five_prime_UTR
Spo18549.1.utr5p.3	Spo18549.1.utr5p.3	five_prime_UTR
Spo18549.1.utr5p.4	Spo18549.1.utr5p.4	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18549.1.CDS.1	Spo18549.1.CDS.1	CDS
Spo18549.1.CDS.2	Spo18549.1.CDS.2	CDS
Spo18549.1.CDS.3	Spo18549.1.CDS.3	CDS
Spo18549.1.CDS.4	Spo18549.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18549.1.utr3p.1	Spo18549.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo18549.1 vs. NCBI nr
Match: gi|902165156|gb|KNA07070.1| (hypothetical protein SOVF_175330 [Spinacia oleracea])

HSP 1 Score: 125.6 bits (314), Expect = 9.300e-26
Identity = 69/96 (71.88%), Postives = 73/96 (76.04%), Query Frame = 1


		  
Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETADLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373

[Close]

BLAST of Spo18549.1 vs. NCBI nr
Match: gi|731321905|ref|XP_010671598.1| (PREDICTED: dnaJ protein ERDJ2A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 123.6 bits (309), Expect = 3.500e-25
Identity = 68/96 (70.83%), Postives = 72/96 (75.00%), Query Frame = 1


		  
Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRET DLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373

[Close]

BLAST of Spo18549.1 vs. NCBI nr
Match: gi|118481069|gb|ABK92488.1| (unknown [Populus trichocarpa])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. NCBI nr
Match: gi|743877355|ref|XP_011035368.1| (PREDICTED: dnaJ protein ERDJ2A-like [Populus euphratica])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. NCBI nr
Match: gi|566165358|ref|XP_002305942.2| (DNAJ heat shock N-terminal domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 111.3 bits (277), Expect = 1.800e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175330 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.500e-26
Identity = 69/96 (71.88%), Postives = 73/96 (76.04%), Query Frame = 1


		  
Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETADLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373

[Close]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053200 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.500e-25
Identity = 68/96 (70.83%), Postives = 72/96 (75.00%), Query Frame = 1


		  
Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRET DLPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQCVIQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCVIQAV 373

[Close]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: G5DWP6_SILLA (Translocation protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.500e-25
Identity = 67/96 (69.79%), Postives = 72/96 (75.00%), Query Frame = 1


		  
Query: 5   VIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLIF 64
           +++TQLLIQAHLTRETA LPPTL GDLKRVLELAPRLLEELMK                 
Sbjct: 300 LVKTQLLIQAHLTRETAGLPPTLNGDLKRVLELAPRLLEELMK----------------- 359

Query: 65  HILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                MALIPRTAQGHGWLRPAIGVVELSQC+IQA+
Sbjct: 360 -----MALIPRTAQGHGWLRPAIGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: A9P7Y5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.300e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Match: B9H3M8_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07070g PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.300e-21
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+ADLPP L GD +RVLELAPRLLEELMK                
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRT+QGHGWLRPA GVVELSQC+IQA+
Sbjct: 359 ------MAVIPRTSQGHGWLRPATGVVELSQCIIQAV 373

[Close]

BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Match: DNJ21_ARATH (DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.100e-22
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+  L P L GD +RVLELAPRLLEEL+K                
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRTAQGHGWLRPA+GVVELSQC++QA+
Sbjct: 359 ------MAVIPRTAQGHGWLRPAVGVVELSQCIVQAV 373

[Close]

BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Match: DNJ29_ARATH (DnaJ protein ERDJ2B OS=Arabidopsis thaliana GN=ERDJ2B PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.900e-16
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           + I+T+LLIQ  LTRE++ L PTL  D + VLE APRLLE+L+K                
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFL-------DILDFLML 112
                 MA+IPR  QG GWLRPA+GV+ELSQC++QA+          DI  FL L
Sbjct: 359 ------MAVIPRNEQGRGWLRPALGVMELSQCIVQAVPLSARKSSSEDIAPFLQL 391

[Close]

BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Match: AT1G79940.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.600e-23
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           ++++T+LLIQA LTRE+  L P L GD +RVLELAPRLLEEL+K                
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQAL 101
                 MA+IPRTAQGHGWLRPA+GVVELSQC++QA+
Sbjct: 359 ------MAVIPRTAQGHGWLRPAVGVVELSQCIVQAV 373

[Close]

BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Match: AT4G21180.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.200e-17
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1


		  
Query: 4   SVIQTQLLIQAHLTRETADLPPTLYGDLKRVLELAPRLLEELMKVNIDTILQMFSLVSLI 63
           + I+T+LLIQ  LTRE++ L PTL  D + VLE APRLLE+L+K                
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIK---------------- 358

Query: 64  FHILMHMALIPRTAQGHGWLRPAIGVVELSQCVIQALQFL-------DILDFLML 112
                 MA+IPR  QG GWLRPA+GV+ELSQC++QA+          DI  FL L
Sbjct: 359 ------MAVIPRNEQGRGWLRPALGVMELSQCIVQAVPLSARKSSSEDIAPFLQL 391

The following BLAST results are available for this feature:

BLAST of Spo18549.1 vs. NCBI nr
BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
BLAST of Spo18549.1 vs. TAIR (Arabidopsis)

BLAST of Spo18549.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902165156\|gb\|KNA07070.1\|	9.3e-26	71.8	hypothetical protein SOVF_1753...	[more]
gi\|731321905\|ref\|XP_010671598.1\|	3.5e-25	70.8	PREDICTED: dnaJ protein ERDJ2A...	[more]
gi\|118481069\|gb\|ABK92488.1\|	1.8e-21	60.8	unknown [Populus trichocarpa]	[more]
gi\|743877355\|ref\|XP_011035368.1\|	1.8e-21	60.8	PREDICTED: dnaJ protein ERDJ2A...	[more]
gi\|566165358\|ref\|XP_002305942.2\|	1.8e-21	60.8	DNAJ heat shock N-terminal dom...	[more]

BLAST of Spo18549.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QIJ4_SPIOL	6.5e-26	71.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CVP5_BETVU	2.5e-25	70.8	Uncharacterized protein OS=Bet...	[more]
G5DWP6_SILLA	5.5e-25	69.7	Translocation protein (Fragmen...	[more]
A9P7Y5_POPTR	1.3e-21	60.8	Putative uncharacterized prote...	[more]
B9H3M8_POPTR	1.3e-21	60.8	DNAJ heat shock N-terminal dom...	[more]

BLAST of Spo18549.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
DNJ21_ARATH	8.1e-22	56.7	DnaJ protein ERDJ2A OS=Arabido...	[more]
DNJ29_ARATH	3.9e-16	46.0	DnaJ protein ERDJ2B OS=Arabido...	[more]

BLAST of Spo18549.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G79940.1	4.6e-23	56.7	DnaJ / Sec63 Brl domains-conta...	[more]
AT4G21180.1	2.2e-17	46.0	DnaJ / Sec63 Brl domains-conta...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.3380.10		coord: 7..101 score: 9.8
None	No IPR available	PANTHER	PTHR24075	FAMILY NOT NAMED	coord: 4..47 score: 2.9E-14coord: 70..101 score: 2.9
None	No IPR available	PANTHER	PTHR24075:SF0	TRANSLOCATION PROTEIN SEC63 HOMOLOG	coord: 4..47 score: 2.9E-14coord: 70..101 score: 2.9
None	No IPR available	unknown	SSF158702	Sec63 N-terminal domain-like	coord: 79..105 score: 2.88E-9coord: 7..50 score: 2.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0006457	protein folding
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane