Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGTTCAAGAGATATCTCCATTGGATCTGCAGGTATTATTTCTCTTCTATTAGGGAATCTAATTCACAACGAGATTGATCCTACTAAAAAAATCTTGTAGAATATCGAAGACTTGCTTTCACTCCAGCAGTTTTTGCAGAGATCACCCAAATGACCCTTGGATTTTCCAGGTTAGTCATACACTCATTTGATATTTTGTTGTTTTTTTCTCTTTAAAAATTACTATTGTAGCAAATCACCTGACTTTCATGTCATCATATTTTTGTTTGTACAATGCAAGAGTATTCACCCACAATGGTAGCTTCATTAAGAATTTCAATCTACTAAACTTCTCGCCAGAATTCTTGATGGCCCAAGACTCTTATGGAGTTATGGTCAGTACTTCTTCTTTTACAAAGTAATTCACAATTCAATCCCTTGTATGCTCAAAACTTGCCAAAATATGACAGATTTGTATAAACATTACTTTACTAGGAGGTAACATTTTCTGAAACCTTATTTGATGATTGTCTGAGTTCTTGTGTTCCCTATATTTTTATCTCCTCGAAAATTGGAGTACTTGTTTATTTATTGACAAGGACAACTTGATGTATTGTATTGATGCACTCTCACTCTATCTAATATTCCGACAATAATGCCGATTTGAATTTAGTTCGTGCTTTGTCTCTATACAACTGAATTACTGATATCGTGTTTTTTTTAGCCAAGGTGATTGTAGCCTTCAACACTTGCTCAATTGGGGTCTTGGGGAGGTATCTAAGGAACTTCTCTTGTCTGTAGTTTATGTTTGTTGTGTTGACTAATGAGGTTAAATTAAAAAGAAGAAAAATCTTATAAAAAAATAATGCTAATCTGATTAATCAGGCAATCATTCTGATTATTCTTCTTGATATTGATTGATTGGAGCTTTGAAGATCTTGAAAGTTCTCTGATGTTTAATCATCAGATGAATCGTCGGATGAAATTTCTAACCTCTAATCAGCTGTAATTTCTGCTGCCTTATTTGCTATAAGATCAATTTTATGTCATAGTGTTGTAAATAATATACTGACTATTGCTGCCAAGTTATAGTGCACGTGTGTCTCTTGTGCTACAAAACATCATATGATTGCTTCTTACCTTCTTTTTCCTTTCTTTCCTCCTTGTGACCAGATCAAGTTTATGGATGTTGCATGTTCATGTAATTTTGTTCATGTTAAATGTAAGAAGCTACTTATTCGGATATTAGATTTATGAAATTAAACTATCATTTGGTAGATGTCGTTGACGATTACATTCTGAAGAACATGTTCCACTATATCCAATGGTTTATCTCCTTGTCTAGTTTTTCTTGCTAGCAGAGTGTAGTATGTATTATTCAATGTAGTATTGATTATTGAACTTGACAATCTGCACGGTAGGTCTTTGATAAAGTTGTAAAACATTTATTTGAGTTTCTTGCAGCTAATCTCCACTAAATAAATTATTTTGAACGTAAGTTATATTTCAAATATTATAGTTATGTTGATCTACAAAAATCGCAAGCTGAACATGATGGGAAAGCATGTGCTACTATTGGGCATACTATTCTCATGGATCTATATGACACATTATTTAGTTAGGTCAAAATATAAGTAACTAAGTGTCTACTTATGATTATGGAAGTACCTGCCTCTCTTTGGTCAGTTGGACCTGACTGTTGCTCAACTTCTTGTTACAGACAATGACTTATGGATTTCCTTTCTTTGTTTGTCTGGAATTTTGATTTCCTTTCATCATTTCCTTCTCTTTCTCCTTGACGATATGATCCTGGTTAAGATGCTGTCTATTGTCAAGCACCTTGAGCTATTTTTATTTCAAGAGTAGAATGTCATTTTGTTGATTCATTAAAATGATCCTGTTTCACGAATTGATTTATCTTTATCAATATATTTTGTCATTATCTTGATCTATTGATTTTTTTTGTAATAGCATGTTGCTGAGATTCCGCATGAGAATCACTTTGTTGTAGACACCAGAAAATTGATCATTGAACAGTGTCATATTTGGAAAAAGATAGATTTCCTCCAAAGTAATCTACTGGCAGCTTGCATTGTCTGGGTCAATGATAATGTAGTACTTGTGTTTTAGAGTTTATTTTTGTCCTCTTCTCTGCAAAAACTTGTAAGAGGGACTTCATGTTAGTTAGCAACCTAGCATGTTCAATTCTTGTCATGGATTAGGTAAATGTTGTGAGTCGTTATCTGACAACTTATTACTTTAGTGATTGGAAATTGAATTCAACTTGTTAGTAAGATATATCCTACATAACCTTATCATACGTTAGAAAGTTCGAAGCTTCCTTTAGTTGCTCTTTTGAAGCTTTGTATTTACTTATATAGTGGAACAACTTTTGATATCCTAGAGAGACCTATTTCATGACGATTGAATAGAGTTGTGGTTGATCTATATAGATGAGAGTTTTAAACTAGGGTAAAGACCTCACCTATTTGCAGTATATCCAAGTAGCATGCTTTCTTTGGGAAGAATCTTTTTAATATTTGTTGACTCCATCACTGCTTTTTCTAAGCTACTCGAATCCAAAGTTGAGCCCATTTTGAGTGAGCTCAACTACGGAGTATCTTATAACCAAACTCGACCCCCAAGTTAAAAAGTGAATTAAGTTAAAGTTTGTCTATAGTCTGGCATGGGAATATGTGGCTTTCGTCAATTGTTTGTTAGTCTCTATTCTCGCGTAGGTATATATCATTTGTGGTTTCATTGTTTGTTATTTTATACAATGTACATGTTTGAAATATAACCTTGTTAGTTTGTATAACCGCTTGGGAATATAACCTTTGTGATTCAAAGTAAACTATGTCAATGTTTTATTCAATTGGTTTGTTAGTCTATACTCCCGCTTGGTTCAATTTTATGTTATGGCAATATACTTTCTTGGCATAAAGTGAACTTAGTCAAAGTTTTGTTACAACAAGATAACTTAGAACTTACTGGTCTCATTCCCAAAGAGATGAGTTCCAGAGTAGATAAAGCAGGCTAACTATGGCAACGTAGGTTACCTTCCTTCCGAAAACTTGTTTGCAGTATGTTCTAGACCGGCCAAAACAAGTGAACCAGTGTGTTCCTGCTGCCAAGAGAAGTATGTACTGTAGGAACACTAAAAAAAGATGATTGCTTATTTATGAAGTTTATGCACTCCTTTAACCCATAATGTTCAATATCCATAATGTTCTTTAGTATTTATTTAAGGGGGGCCAGATTGGTGTTTCTTTAGTATTTTTAATATCTGTAGAGTTCCATCGTAATGGAGTAATAGGAAAGATCACTTATGTTACCCTAGTACGCATGTACTGATAACTGATCTCTAGAGGTCATGACTTTTTCTTTACCAGTTTCATCTCTAATAGCTTTGGTGGAACATCTATCTCAACTACGATGGATATAATATTCAGCAGCGTAATCACGATTTTCTGGTTGGGTGAATCTTCTTCTGTCTCTTGCGTTGTACTTCCCATAACTTGGCAGCTTTTACCTTTATGCTTAATTGTAGCTGGTTCTACAAATGTAGCGTGAATCCTTATTTATGTTTACAGATAAAAGATAACAGGCGATTGTTCTGCCTTTATACAAATGGATATATCCTACTTTTTGTAACCCCCATTGTGTTAAATTGGAGGTTTGTTGGAACATTCCTTGTTTGTTCCCCCGTGTTTGTATTGGTTTCTCTGGTTAATAATAATCTGGTGTGTTTTAGAAGCTCATACTTGGGATAAAGAAAAACTAGAACTGTGTTGGTTTCCACATAAGTGTCACTTTCGTGGGTTCCTAAATGTTTTTTCTGACATATGGCTTTCTGTTAACTTCCTATTGGTAGTGTTAGAAATGTGGAATCTTGAAAGTTCAGCAAACACAGCATATATAGAGGGAAATTATTTTAGTTACTTTATCCATTGTTGTGGAAGGAGAAGTAATGTAACTTATATTACAGGAATTTTTCAAGTTTTATTAACTAGAGGGAAAGTGAACATGTTATTTTGTTGGCTTATGCTTCCATGGAACTATTTTGCAGGTATTATTTTTGTTCATGATCTTTCACAAAAAAGGACAAAATCAAGCTTTCAGAAATGGGCTGCTGAGATTGCTGCAAATGCGACTTTTTCGGCACCTCCGGTAATCTTGTTGATGTTGCTAGGCAATGGGTTGAGAAGCAAAGTCTGATATCATCTAGTGAGGACCTTCCCCACTGCAAGATTTCCTGGAAATTCATCCCTTATTGCTGTAAGAAGTCGAACTTTTTGGTTAATATTGACTCGTACTAAATTTTCCTTTTTAATGTAATAAGCAGTTTCTGCTTTCATTGAAAACAAAGGGGGAGGGGGTTCGGGAATAAAGGAGATGCTTATTTTCACGAAAGCATATATAATTCATATCAATTAAAAAGCTATACCTGGGAAACAAGGGAGATGCTTGCATCACCAAAGAGTATAAAATGAGAGTATATAATGACCGTATGCTTATCTAGTGAAAGCTAGTAATGCGTACTCTCCCAATAAAATGAAACGCACTTGAAGAACTTGGTTGAACAACTCGACACCACACCTTTTAGTGACACGTCTTGATTACAATGAGCTTATATATGAGGAACTTGGTTAAACAACTGGCATCACACCTTTTATTAATATGCGGGAACAGAACTATGCTAATGTTTTATTATCCTGTTAGAAAATTATTGTGATGGAAATTGAATAAAAGTATTAAAATTATACTGTGCAGTACTTCAGAAAACAATAGGAAATGTGGTAGAAAAAACTTATGCCAGTACCAATCCTGTTCACAGGACCTCCTAACATAAGTTCAGGGACATCCTCGAGATGCTGCCTCCGAAGAACAATATTTTTATGGAATGGGAATTACTGCACGAATGATTTTTTACTCTCTATTTTTTCTTCTTAATTTATGGGTGTGTTGTTGCTGTTGTTCTTCTCGTGCATTGCTGCTGTGGAGCTGCTGCTGTAAGGCTCGTGCAATGTTGATGTTTCTAGGTGGTTGCTCGTGTGCTAGGTAGCTGTTGTTCTGCCCTTTGCTATGTTCCGTGCAAGGCCTGCCCATGGGGCTGTGTTCTTGTTCCTGTGCTACGACAACATCAGGCGGCACAGTGA ATGGGTAGTTCAAGAGATATCTCCATTGGATCTGCAGAATATCGAAGACTTGCTTTCACTCCAGCAGTTTTTGCAGAGATCACCCAAATGACCCTTGGATTTTCCAGAATTCTTGATGGCCCAAGACTCTTATGGAGTTATGGTATTATTTTTGTTCATGATCTTTCACAAAAAAGGACAAAATCAAGCTTTCAGAAATGGGCTGCTGAGATTGCTGCAAATGCGACTTTTTCGGCACCTCCGGTGGTTGCTCGTGTGCTAGGTAGCTGTTGTTCTGCCCTTTGCTATGTTCCGTGCAAGGCCTGCCCATGGGGCTGTGTTCTTGTTCCTGTGCTACGACAACATCAGGCGGCACAGTGA ATGGGTAGTTCAAGAGATATCTCCATTGGATCTGCAGAATATCGAAGACTTGCTTTCACTCCAGCAGTTTTTGCAGAGATCACCCAAATGACCCTTGGATTTTCCAGAATTCTTGATGGCCCAAGACTCTTATGGAGTTATGGTATTATTTTTGTTCATGATCTTTCACAAAAAAGGACAAAATCAAGCTTTCAGAAATGGGCTGCTGAGATTGCTGCAAATGCGACTTTTTCGGCACCTCCGGTGGTTGCTCGTGTGCTAGGTAGCTGTTGTTCTGCCCTTTGCTATGTTCCGTGCAAGGCCTGCCCATGGGGCTGTGTTCTTGTTCCTGTGCTACGACAACATCAGGCGGCACAGTGA MGSSRDISIGSAEYRRLAFTPAVFAEITQMTLGFSRILDGPRLLWSYGIIFVHDLSQKRTKSSFQKWAAEIAANATFSAPPVVARVLGSCCSALCYVPCKACPWGCVLVPVLRQHQAAQ Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo18603.1 vs. NCBI nr
Match: gi|902202502|gb|KNA14295.1| (hypothetical protein SOVF_108710 isoform A [Spinacia oleracea]) HSP 1 Score: 73.9 bits (180), Expect = 2.100e-10 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1
BLAST of Spo18603.1 vs. NCBI nr
Match: gi|902181007|gb|KNA09654.1| (hypothetical protein SOVF_151600 [Spinacia oleracea]) HSP 1 Score: 67.8 bits (164), Expect = 1.500e-8 Identity = 37/50 (74.00%), Postives = 38/50 (76.00%), Query Frame = 1
BLAST of Spo18603.1 vs. NCBI nr
Match: gi|225463111|ref|XP_002264573.1| (PREDICTED: uncharacterized GTP-binding protein At5g64813 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 3.600e-7 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Spo18603.1 vs. NCBI nr
Match: gi|604319936|gb|EYU31100.1| (hypothetical protein MIMGU_mgv1a009674mg [Erythranthe guttata]) HSP 1 Score: 63.2 bits (152), Expect = 3.600e-7 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Spo18603.1 vs. NCBI nr
Match: gi|848890135|ref|XP_012845210.1| (PREDICTED: uncharacterized GTP-binding protein At5g64813 isoform X2 [Erythranthe guttata]) HSP 1 Score: 63.2 bits (152), Expect = 3.600e-7 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R456_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108710 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.400e-10 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQU9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151600 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8 Identity = 37/50 (74.00%), Postives = 38/50 (76.00%), Query Frame = 1
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Match: A0A022QX47_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009674mg PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.500e-7 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Match: A0A068V7W1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019442001 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.500e-7 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Match: D7TFS4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02170 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.500e-7 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Spo18603.1 vs. ExPASy Swiss-Prot
Match: Y5483_ARATH (Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana GN=At5g64813 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Spo18603.1 vs. TAIR (Arabidopsis)
Match: AT5G64813.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 60.5 bits (145), Expect = 8.300e-10 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Spo18603.1 vs. TAIR (Arabidopsis)
Match: AT5G09910.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 51.6 bits (122), Expect = 3.900e-7 Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18603.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18603.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18603.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo18603.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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