Spo18644.1 (mRNA) | SpinachBase

Overview


Name	Spo18644.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Polypyrimidine tract-binding protein 3
Location	SpoScf_02285 : 36818 .. 46679 (+)
Sequence length	1783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATGTGAGTCTCTGACAATCAACTAATTTAGCACCAAGCCACCAATCTACTAGTATACAAAACGTTCAACAACCAATTACTAAATGAGACCTATTTTTCTTTATTCACATACTAGAGGCGGATCTTGGGTGTATCTTAAAGAGACTAGACCCCACTACAAATTTTATCAAAGCATTTTCAATTCCAACCCTTAATAAATTTTGAGTAAAATTGTACAAATCTCATACTGAATTGTCTAACTCTTGTACTACGGATCTTATTAACGTTATATTAAAAAAAAGTAAAATTATTTGACATCCGTCATAACTATTTATCTTCTCTCTAACTACCGTACTACATCCGTTTCGAAATAATGAGAATGGTTTCCATAGGTAGGTGTTTCAAAATAATAAAGACACTCTACTTTAATCTATTTTTGGTTAGGTGACTCGTCATATTTAATGTATTCACACCCATCTTTTTCCCACTTTACTTACAACATTCCACTCAATTTATTTTTATATAATTTTTTACTCATAACTTTTCACACAACCTATTTTTTTTATTTTTTTTTACACCATTTCACTCAACCTAATTTTTATTATTATTTTATTACAAAATTCCATTTTTCCATATTTATTTCTTACTTTTCAATCATTTATCATAATTTTTGTAATTTGTGTAAGTTTTCTCATTATTTCGAACGGAAGGAGCATAAGATTATAAGACAAAGTATGCGTCAAATTGAAATTACAATCTGATAGGTGGAGACAGAATGAAGTGTTTGAGCAGCTTTTCTTTGTGCCCTTTATGACGTTTTGTTGGATCATGAGTGCTTAATTAGGTTAAATTAGTACGAGTACTTCAAAATTGGAGGAAAATACCAAAAAAATTAACAAAAAGAAAAATTAAAAAAAATAAATCATTTCACTTTTTTTTTTTAACAAACTCTCGATTCGTATCGTAGGGCTTCCATCCCTTTCTTGTTCTTCTGCTTCTTCACCCTCGCATCCTCCTTTCTTTTAACATCTCTTTCAATCTTCTCCATTTTTCTCTCTCCTATTAAGCTTCACTGTGAGTCCTTTCTCCTAATTATTATCACTTTCTTCATTATTTTTTATTTTTAGGGTGGTTGTTTTATGGGTTCTTGTTAATTTGATTAATTTTTTAATCCTTCTGGTGTTTTGGGTTTGTTGCTAATGCATCTGATTTCAATTTTTTTTTGGTGGGTTGCTTTTATGACGTTATTTATGGGGAATGATTCAATTTTATTTTATTTTTCTCCTTTTCGTGTATGTGGGTTTTACAAATGTGATGTTTTGTGTGATTGCAGGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGGTAACACTCATTGGTTGTTTTACTTATTTATTTGATTAATTTTATGGAGGTTAGTGTATGTTGATTGCATATTAATGGAATTTTACAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGTTTTCCTCTTATTTTACCCTCATTGTTATGTTATGGGGTATGTTATCTATGTGTTGAAATTTAGGTAGACAATATAGTCACTTACCGAGACTGTCTTACAGTAATTTATTGCGATACATTAAATATTTTGTCACTGTCCTTTAATACCGGATTTTGTCATACTTAGTATGATATTGATTCTCCTCGAGTGTCAATTTAGTTACTTGAATGATCAAGGATGACCACCTACCTTCTCAGGTTCCCTTATATGTGGGTGGTGGGTGGTGGCTGGTGGGTTTCATTCACAGTATTCACACTTTCTTTCAAGGCACTAAGAATTTGAAAGTATATTCTTTGTGTTGTAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGTATTGTCCTTGTTGGCTCATATCTGTTGATTTCCTTCTTTTTACCCCCACCTATTCACTCATTTTGTTGTGATTTCTGAGGCGTTACCATTTGGTGAACCTTTGATGATCCATAAGTTTAATTATTTGGTTAACTTCTTGATGGTTGCTAACTACTGCTAGTTGAGTAAAATGTTTCAGTAATTGGTTGCAATAGGCCATGTTGTTCATTAATGCTAGTACTATAGGTGTATTGCCTGCAGTTCCTTTTGATTTTGATTACTTCGGTTTTCCAATTTGCAGACAATTTTCTGGTTTTTGCAACGTAGAGTCCTAAAGTTATTATTTTGCTTAATATTTGCATTGGGAATGGTTTAATTCTGCATAAAGATGTTGATAAAAGTAACTCAAAAGCAAGATGACTAAATAAGAAACATAGAAGGCTTAGTAAACTGTATAGATTTTCTTTTTATTGCGAAGTAGCAAAATGGCCATAACTTTAATCAAAAGTCTATTCAAAACAGCTTCTATATTAAGTAGTTGTAAGGTTGCATACACTTAACTCACCCCACCATTTCCGAGAGGCTCAAGTCAACAAGTTGTTGATATTGTTGCCTGTGTAATATATTCTGTGGTGGTTGTGTTTTGTTGAGCTTGAGCTTGAGCTTGTTTTCTGAGTAAGCAGAAGAAACTGGACAGAGGCTTCTATGACTCTGGGATTTCATCAATGCAAAAATTGGGTTAACAGCTATTTGAAGTTGTTTTTGTCCTGATGAACAAAAGAAAGTGATACAGAATGCCAAGTGTAATAGCCATTGTTGATTGTTCCAAAAGGAAAACTTTAGTTCTTCTAACAGTCATGTGGCTTTAAAAACTAAAAATCAATATACATAGAAGTTCACTATGATTTGTTTCTCAGTGTTAAATAGACATTGGGCTGATGTGATGTTGCTGATGTGCCGAGCTTGGGTATGTTCTCTGAAGCACCACAAAGAGGCTTGAGCACTCTCTTCTCTCTGTTTTAAGAAATCTTTCTTACTTACAAAGGCAGAACCTATTTTGTTTCCTGTTGTTACTGTCTTCTACATTTCCTACTTTCAGCATTAAATTTTCCATCTGCTGTCCTTGAGTTTGCCCTCTTTTGTTTGCTACCTTGTGGAGTCTAGTTTTCTAATTTACCATATCCTTCTTTCTTAGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGTTAGTACCTAACATATGAATCTAGTCAGATTTAATTAGTGTGGCAAAATTAATGCTACAACAATGTCACTTTGGATTACTTGGTTGGTTATAACTAGCGTTTTTATGATCACACAATCATGCTAGAAACTGTTAAGATGTTGTGCATCCGGTGATACATGTGATTTTCAAGCCCTAGCGTGACCACCGCTATTTATTCCACCTCTTGCGAGGCTTGTGGCAAATTGTGTGAATCGAATAATTGTTGCCAGTGTTTGAAAAGGACATAGGGCTTGTATATCAAGTACGTAACAGTAATAAAACTTCATGATTATGTGTAGATAATCCCGGTCTGCCTCGGTACCTTCCAGTGTATAAAAAGGCTAGGCTCTGAGGCGCAAGGCGATTGGAACCAGCGCCTTTTATTGTCTAGGCGAGGCGATTTCGATGAGGCGCACCTAAGGCGCAAAAAGGCGCACCAAGGCGCACAAAGGCGCACTTTGAGGCGCAAAAAAGGCGCACTTACGAAGGCACACACCATTTTTTCACTTTTTTTTAACTTTTTATTAGGGCGCCTCACTTCAATGAGGCGCACCGAGGCGCACCGAGGCGCGCCTAAGGCGCTGGGAACTCCAAATCGCCTTGTTGCGCCTTGAGCCTTTTTATACATTGGTACCTTCTGACATTGTAAGATTCATATGGACACAACTTTTCACACTTTTCGTCAAACAGAGATGCGCAGAGTTTGCAAGAAACTTCTTATATCTTCCCAACAAACTGCCTTACATCAATTTTTTGTCCACTGATTTTATTGCAAATATCCAGGGATATGTGTGTCCTGTTCTTGTTTCTGCATCCTGTGATAGATTGGAGCTGTATATTGTTTAATCACTCTTTAAGTAAGCAATCGGAACCAATAGTAGTTGTAATAGTTGATGCAATTAAATCATCTACGTTGGAATACAGCTTAGGTAGAGAAAGTAAATGGAGATGACAGAATAATCAACATACTTTATCTTTCCCTAAACCCTTTATTTATAGACTAACGAACTACCCTCTTGTTGAATAAGGTATCCATAACAACATTGTTACCACACTTCCTAATGTGCCCTTCTCCTATGGTGCTATACTCGATGCATTTCACTTCCTTCTTCATTTGAGGTGTGGAGGGCTGGATTTAGGAGAGATTATAGGAAGGGTGATGAAAACTGGTAGGGGGAAAAAAGGGAAGAAGACTTTCCATTTAGTTTTTCCAATAAGGCTCTCATTCTCATATGAGGATTCAATCCACTTTCTTGCAAGGAGCACAAGGTGTCCACAGGCAGATGGATCAACTTAAGATGGTCATCGTAGCTTTTGAGAGGTTCTCTAGCAAAGTTGGGTGGATTTAAGTTTATCTTTGGTCGTTCATCAACAACAAACAACTTTTTTTCTACTGAAAAGCATTATCTTTATACTAATAATTCAGAAGCATATCAAAAAACAGAAGGGATTTGTTAAGCATAATACGTCTTACGTGTCAGTCACCTCTGTTTTTTCTTTTTTGTGGCAGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGTTAGTTTCTTCCACCACGCTTGCCTTTTGTAGTTTCCCTGATCAGTCTTCCAGTTGACATGATTTATTAAAGTGGCAAATGAGTATTAACTTCAACTTATTTTATTAATATTCCACTGCCACATTTTGTGCAAAATCCTAAAGTTGTAATTGTAATTATTCATTTTCCTTCTTATTTTTGTGTAGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGTCCGTTCCATTATCTCTGTGAATTATTAGAACAAAATTATGTATCTTGCTCTCTGGATTATCTGAAACTGTGCATTTTGCAGGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAAGTAGGTTTTATTCTTCTTCCCCTGTCAAAATTGGATTCCATAAAAGCATTATTATTATTACGAAAGCTATCTTATTATATATCTATCGTTTCCTTATGTTGCAGCCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGGTAAGGTTTGAATAGTTCAGGGAAATATGCTGTGTTACCATGAGATTTAGGGTATATGAATTTTGTTACTTGAGTTTCTTTTAATTAGTGCTCGTTAAGGTTTGGTCTTACCTCTATAGCTTTCTTTTAGGCTCTGCTAGTTGTGATTTAGAGTTTTTCTGTTCAGCTCAAAACAATATGTTTTAGCTCTTTTGTTGTTTTCTATAGTGACTCCACGAGTCCATGTACACACTGTGTATACTAACAAGGAAAATTTGACATGAATAATCCAAATTTTCACTCATTTTCTATAATAATCCCAACTTTGGAATATTTTAGAATAAACCAAACTTTTGGGGTTACCTTCTCAAAATAATATGAAGTCTTCATTTTTTTGTCATTACTAAACCATTTTGGGTCTATTGTACATAGGCAATTGATAGTTTGGCTTATTTTAAGAAGATATACCGGAAAGTTGGGATTATTCCAGAATAATCCAAAGTTGGGATTATTTTCAGAAGATGAGTGAAAGTTGAGATTATTTATGTCAATTTTTCCTACTAACAATGCATTCCCTTTCTTCTGATTTGTTTTTCAGCAACTTTTTGAAACCAACTTGTCAATATTTTAATATCAAATTTGTTAATGGCAAAAAAATTTGGTAGATGGGTGAGAGGCTAAGAGGTATTAGGGATTTATTTAGCGCTTTGTAAATTAAAGAAATGTCTTTACATGTGCGTGGGTTGCCATTGTGAGACAAACAGTAGACTGCGCAAATGCGCATAGTTTAATTTAAAAACTTGAAGCATTTTTGAGACCTAGACTATGAAACAGTGTTTTTTCCCTGTAAAATGCACCCCTCGTCTCATCTTCCCTTTTCCTTCCATCTTCAGATTATCCCCAGTCCCCTCCTTAATCTGCCGTAACAGCCTACTCTTTTTGTCTAATGTTGGTTGCCTTACCCATCAGCAGTTCCTCTATCCGCCTAATTAAGAGCCTCTTGACAGCTTTGTTCTTTGGAGTTGCAAACTTCATCTTGTTCTTGATGGTCATGTGTGTCGGTGGTGTTTTCTTCAATCTCCATCTTTTTCTTAGCTTTAATTTGAGCCCATGCTCACTCTTGTCCCTAAAGGGGGAATGGTGTTCATGACCTGGATAGCATTTATCAATGTGATCAAATAATAAAATCAGTACTGCTAAAAATTGGTTGTTATGATTCAATTTCAAGATATGGTGAGAATCCCGTCAAAAAAATAATAATAATGGTGAGAGTGAGTTGCTGATAAGGAGATAAACGAATCGTATTTGTGGCAGACTCATACAGTCATACTTTGTGAACGAAATCACCAGTTTGAGTTTTTCACTAGTTTCAAGAATCCAGTTCTTCTATGTTAATTTTTGTGGAAATCAGAATCTTAGTGATAGCATGCATGTTACACATTTACGTATAAGAAGATTCAGAACATAGGATACCACTAATTAATTTTCCTTAAATCTTGAGATAAGGTGTCGAATTTGTTGAACACAGGATGTGCGTTCATTGATTGTTCTAGCTGACACTGTGTTTCCTTAATTGGGCAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAAGTGTGTATTTTCTTTTGCTTGTTTCACATTTGGTCTATCTTGATTTTGGCGTCTCTCCTAGTAATCTAGAACAAAGAAGGAAAGCTACTCAGTCTTATCCCTCTTGGTTCAGTGACTAAGAATGATGCTCGAGTTTTATCCGCTGATGATTTTTGCGAATGGTTTTGTTGGCAACAGTCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGGTGCGTATTATATGATTAACTTTAGATCCACTTGTATTATCTTTTGGATCTTGATTGTGGAGTTGATTCTAATCAGGTTTTCTTTCTCTATGTTGCAGTTGCATATGGCCAGGTATGCATCTCTTGTGCTTGAGTCTTGAATAAATGCTATTTATTATTATGTTCCTTGTTTCTAAAATAAAGGCAGCACATTACTTTCCAGATCAAATCTTATTTACAATGGCCATTATCTTCCATCATAATATCATGATAAAACCTATAAAACCTTAACCTTACAATAGTACTTTTTATGATAAATTTAGCGATGATAATTTCTCATCATAAATAAGTGCAATGTTTTATAAATTGATAGTAAAAGTTCTTATTTTCTTTTATTTTTTCTTGGGTGTTTGTTTTATGGTAATGGGAGGAACCCAACCCTCATTATGGTAAGTTATGTTTAGAAAATTAATTTCCATGTTTTCTGACATTGATATTTTCATGTGAAAATTTTCACCTTCCTTTTGTATGTTTGCTTGGATTTCAATGGCATTACGGTCACCTACTTTCTCATGTTTCAAAAAAAATTGGGTGATACATTTCAAGAATTTTGAAATAGGGGGATTTTGTGTGTGGGTTCAAGCCTTTGTTTCACCAAGGGGTTGTGTGACTTGTGTCTGTTGTTTCTTTCCTTTGTTAAAGAACTTCTAGTCCTAAATTACGTAAATTAATTACTCTTAAATAACTCTTTGTTGCTTCTTCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATGTGAGTTATTTTCCCTTTCCACCTAAAATGATCCTCAATATTTTGCCTCTGCTTTTCCTAATGGTATGGCCAATTCATTTTTCAGAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGTTTGATTCGAATATGAACTTCAAGTGTTTTCATTGCACCTCTCTAGATAGCTTTTTTAAGTTGTGGAGTTCGTTGTTCCTTTGCTGATTAGAGCAAGTTTTGGGTAAATCTGTGAATCTACATTGACATAAAAAAATTGGCGTGTTTTTTTCCATTCTTTATATTTATAAGCTTGTATATTAGTTATTTTCATCAGTCGATTACTCAAACTACTTTATGAAGCTAATCTGGAGTTCAAAACAGCTTAAATCTAATGTAAGAACCAGTTATTCTTTGCCATAAATTCTTTTGGCAAAGTCTGTTGATTGTCTACCAAGTTCTTCTGCACGAGTTTACAGTGAGCTGTATGCCCGTGCCCAGTAACTAGATTTCATAATTGATACTGGTAATTGTTAACCTCAAGTCTGTGCTTTGTACTAATCGCTGTTGCTACTTTTTCCTGAGTTATATTGACCTCACTCCAGATACCTGTATAGCTGTATTCTGAAAATTCTTGAATTACTTCCAAAATTATGTCTTTAAAAAATCGATCCTCTCGGAAGTTATAGCAGTTTAGCACCTGTTGAGAGTAAGCAATTTTCTTCCATCTCCTGCCTGAGTAATTTCGAGAATTTATGACAAGTTTGATTACAAAATTTTGTGTTCAGACTTCAGAAGGCAATTTTTTTGCTGTAACTTTCTAACATTTTGCTTGTTATCCTTGAAACTTCAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

mRNA sequence

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

Coding sequence (CDS)

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGA

Protein sequence

MKMMCTAEVVLTSITAVVNNLGPRQITMSNSGYLSSRTSSLFINSFLIKMSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVCGSIIRISFSQSQNT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18644	Spo18644	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18644.1	Spo18644.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18644.1.exon.1	Spo18644.1.exon.1	exon
Spo18644.1.exon.2	Spo18644.1.exon.2	exon
Spo18644.1.exon.3	Spo18644.1.exon.3	exon
Spo18644.1.exon.4	Spo18644.1.exon.4	exon
Spo18644.1.exon.5	Spo18644.1.exon.5	exon
Spo18644.1.exon.6	Spo18644.1.exon.6	exon
Spo18644.1.exon.7	Spo18644.1.exon.7	exon
Spo18644.1.exon.8	Spo18644.1.exon.8	exon
Spo18644.1.exon.9	Spo18644.1.exon.9	exon
Spo18644.1.exon.10	Spo18644.1.exon.10	exon
Spo18644.1.exon.11	Spo18644.1.exon.11	exon
Spo18644.1.exon.12	Spo18644.1.exon.12	exon
Spo18644.1.exon.13	Spo18644.1.exon.13	exon
Spo18644.1.exon.14	Spo18644.1.exon.14	exon
Spo18644.1.exon.15	Spo18644.1.exon.15	exon
Spo18644.1.exon.16	Spo18644.1.exon.16	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18644.1.CDS.1	Spo18644.1.CDS.1	CDS
Spo18644.1.CDS.2	Spo18644.1.CDS.2	CDS
Spo18644.1.CDS.3	Spo18644.1.CDS.3	CDS
Spo18644.1.CDS.4	Spo18644.1.CDS.4	CDS
Spo18644.1.CDS.5	Spo18644.1.CDS.5	CDS
Spo18644.1.CDS.6	Spo18644.1.CDS.6	CDS
Spo18644.1.CDS.7	Spo18644.1.CDS.7	CDS
Spo18644.1.CDS.8	Spo18644.1.CDS.8	CDS
Spo18644.1.CDS.9	Spo18644.1.CDS.9	CDS
Spo18644.1.CDS.10	Spo18644.1.CDS.10	CDS
Spo18644.1.CDS.11	Spo18644.1.CDS.11	CDS
Spo18644.1.CDS.12	Spo18644.1.CDS.12	CDS
Spo18644.1.CDS.13	Spo18644.1.CDS.13	CDS
Spo18644.1.CDS.14	Spo18644.1.CDS.14	CDS
Spo18644.1.CDS.15	Spo18644.1.CDS.15	CDS
Spo18644.1.CDS.16	Spo18644.1.CDS.16	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18644.1.utr3p.1	Spo18644.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|902213059|gb|KNA17164.1| (hypothetical protein SOVF_082600 [Spinacia oleracea])

HSP 1 Score: 872.5 bits (2253), Expect = 3.600e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|731338381|ref|XP_010680298.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 821.6 bits (2121), Expect = 7.300e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|359480735|ref|XP_002277938.2| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X1 [Vitis vinifera])

HSP 1 Score: 686.0 bits (1769), Expect = 4.800e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|720015939|ref|XP_010260994.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 681.8 bits (1758), Expect = 9.000e-193
Identity = 340/446 (76.23%), Postives = 404/446 (90.58%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQLVQPFG VTKLVMLR KNQALLQM D+ASA+N + Y
Sbjct: 1   MTEPSKVIHIRNVGHEISENDLLQLVQPFGVVTKLVMLRAKNQALLQMHDVASAVNALHY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQT-QGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           YTNVQP+VRGRNVY+QFSSHQELTT DQ  QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YTNVQPSVRGRNVYIQFSSHQELTTMDQNAQGRKGDQDTQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L+ELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGDAGGMY  Q  G+ AVA+ Q+GN A
Sbjct: 181 LSELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYSLQ-PGARAVAFPQMGNAA 240

Query: 290 AM-TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+  AF GGLPPG+SGTN+RCT++VSNLN DKIDEDKLFNLFS+YGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTILVSNLNSDKIDEDKLFNLFSIYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NIT + DTR+Y NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHLNITAAPDTREYLNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+D+++EEI+  +EEHG +V+TK+FE NGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDITEEEIIAHLEEHGNIVNTKLFEVNGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+++  S+IRISFSQ Q
Sbjct: 421 ATEALVCKHASTIDRSVIRISFSQLQ 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|702382324|ref|XP_010063840.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like [Eucalyptus grandis])

HSP 1 Score: 680.6 bits (1755), Expect = 2.000e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082600 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 2.500e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133380 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 5.100e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: F6H4C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02030 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.300e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BYT0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04205 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.400e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BT87_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02695 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.600e-188
Identity = 334/445 (75.06%), Postives = 391/445 (87.87%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN + +
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVL 169
           Y NVQP++RGRNVY+QFSSHQELTT DQ    + D   +PNRILLV+IH ++YP+TV+VL
Sbjct: 61  YANVQPSIRGRNVYVQFSSHQELTTVDQNAQARGD---EPNRILLVTIHHMLYPITVEVL 120

Query: 170 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNL 229
            QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQ A +A ++L GRN+YDGCCQLD+Q+SNL
Sbjct: 121 QQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQCAIAARTSLQGRNIYDGCCQLDIQFSNL 180

Query: 230 TELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAA 289
            ELQVN+NN+RSRDFTNPNLPSEQ+GRSSQ GYGDAG +Y  QA G+ AV + Q+ N AA
Sbjct: 181 DELQVNYNNERSRDFTNPNLPSEQKGRSSQPGYGDAGSIYALQAGGARAVPFPQMANAAA 240

Query: 290 MTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHA 349
           + A F GGLPPG+SGTN+RCTV+VSNLNPDKIDEDKLFNLFSLYGNIVRIKLLR KPDHA
Sbjct: 241 IAAAFGGGLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRNKPDHA 300

Query: 350 LVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAK 409
           LVEM DGFQAELAV+FLKGA LFGKR+EVN+SK+ +IT   DT DY NSNLNRFN NAAK
Sbjct: 301 LVEMGDGFQAELAVHFLKGAALFGKRLEVNFSKHPSITQGADTHDYMNSNLNRFNRNAAK 360

Query: 410 HYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEA 469
           +Y+YCCSPTKMIHLSS+P++V++EEIV  +EEHG +V+TK+FE NGKKQ LVLFE+EE+A
Sbjct: 361 NYRYCCSPTKMIHLSSLPQEVTEEEIVKHLEEHGPIVNTKVFEMNGKKQALVLFENEEQA 420

Query: 470 TEALVCKHATSVCGSIIRISFSQSQ 493
           TEALVCKHA+S+ GSIIRISFSQ Q
Sbjct: 421 TEALVCKHASSLAGSIIRISFSQLQ 442

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP3_ARATH (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.100e-182
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_HUMAN (Polypyrimidine tract-binding protein 1 OS=Homo sapiens GN=PTBP1 PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.200e-73
Identity = 172/475 (36.21%), Postives = 271/475 (57.05%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK I +  SK+ N+
Sbjct: 358 FILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  VS+E++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G VV    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 529

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_BOVIN (Polypyrimidine tract-binding protein 1 OS=Bos taurus GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.900e-72
Identity = 167/475 (35.16%), Postives = 271/475 (57.05%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK + +  SK+ ++
Sbjct: 358 FILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQSV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  +S++++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G +V    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKS 529

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_PIG (Polypyrimidine tract-binding protein 1 OS=Sus scrofa GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.000e-71
Identity = 175/499 (35.07%), Postives = 276/499 (55.31%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR------------ 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS               
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAF 297

Query: 294 ---GRSSQSGYGDAGG----MYPFQATGS-----GAVAYGQLGNNAAMTAFPGGLP-PGV 353
              G  S S Y  AG       P  AT S     GA+A   + + AA  A  G +  PG+
Sbjct: 298 GAPGIMSASPYAGAGFPPTFAIPQAATVSVPNVHGALAPLAIPSAAARAAAAGRIAIPGL 357

Query: 354 SGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELA 413
           +G      ++VSNLNP+++    LF LF +Y ++ R+K+L  K ++ALV+M+DG QA+LA
Sbjct: 358 AGAGNS-VLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNKKENALVQMADGSQAQLA 417

Query: 414 VNFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCC 473
           ++ L G  L GK + +  SK+ N+    +       T+DY NS L+RF    +K+++   
Sbjct: 418 MSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF 477

Query: 474 SPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVC 492
            P+  +HLS++P  +S+E++  L   +G +V    F    +K  L+   S EEA +AL+ 
Sbjct: 478 PPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALID 537

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_RAT (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus GN=Ptbp1 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.100e-71
Identity = 171/498 (34.34%), Postives = 276/498 (55.42%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIHVR +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 57  SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTSV 116

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 117 APVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 176

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 177 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 236

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR----GRSSQSGY 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS        ++  + +
Sbjct: 237 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 296

Query: 294 GDAGGMYPFQATGS-------------------GAVAYGQLGNNAAMTAFPGGLP-PGVS 353
           G  G M      G+                   GA+A   + + AA  A  G +  PG++
Sbjct: 297 GAPGIMSASPYAGAVPSHLCHPSRAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLA 356

Query: 354 GTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAV 413
           G      ++VSNLNP+++    LF LF +YG++ R+K+L  K ++ALVEM+DG QA+LA+
Sbjct: 357 GAGNS-VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVEMADGSQAQLAM 416

Query: 414 NFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCS 473
           + L G  L GK + +  SK+ ++    +       T+DY +S L+RF    +K+++    
Sbjct: 417 SHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFP 476

Query: 474 PTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCK 492
           P+  +HLS++P  VS++++  L   +G VV    F    +K  L+   S EEA +AL+  
Sbjct: 477 PSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIEL 536

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3)

HSP 1 Score: 641.0 bits (1652), Expect = 6.200e-184
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1


		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2)

HSP 1 Score: 146.0 bits (367), Expect = 6.300e-35
Identity = 115/363 (31.68%), Postives = 187/363 (51.52%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E TE +L++L +PFG+V  TK  +   +NQA ++ +D+  AI ++ YY 
Sbjct: 17  SKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYYA 76

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPM-TVDVL 173
           +      VRG+ VY+Q+S+ QE+  ++T    +D  G    +LLV+I      M ++DVL
Sbjct: 77  SSSEPAQVRGKTVYLQYSNRQEIVNNKTT---ADVVGN---VLLVTIEGDDARMVSIDVL 136

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AGYQAL+QF   ++A +A  AL GR++         G C L
Sbjct: 137 HLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSL 196

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYG 293
            + YS  T+L V F + RSRD+TNP LP                 + P     +G VA G
Sbjct: 197 KITYSAHTDLTVKFQSHRSRDYTNPYLP-----------------VAPSAIDSTGQVAVG 256

Query: 294 QLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLL- 353
             G    M      L   +       T+            D L  +F+ +G + +I +  
Sbjct: 257 VDGKK--MEPESNVLLASIENMQYAVTL------------DVLHMVFAAFGEVQKIAMFD 316

Query: 354 RGKPDHALVEMSDGFQAELAVNFLKGALLFGK---RIEVNYSKYSNITPSTD---TRDYQ 398
           +     AL++ SD   A +A   L+G  ++     ++ + YS++++++   +   +RDY 
Sbjct: 317 KNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 342

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1)

HSP 1 Score: 141.4 bits (355), Expect = 1.500e-33
Identity = 81/211 (38.39%), Postives = 130/211 (61.61%), Query Frame = 1


		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E  E +L+ L + FG +  TK  +   +NQA ++  D+  AI++V YY 
Sbjct: 16  SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAISMVSYYA 75

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQV-IYPMTVDVL 173
           +      +RG+ VY+Q+S+  E+  +Q+ G        P  +LLV+   V  + +++DV+
Sbjct: 76  SSSEPAQIRGKTVYIQYSNRHEIVNNQSPG------DVPGNVLLVTFEGVESHEVSIDVI 135

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AG+QAL+QF   ++A++A SAL GR++       + G C L
Sbjct: 136 HLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSL 195

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQ 253
            + YS  T+L + F + RSRD+TNP LP  Q
Sbjct: 196 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQ 220

The following BLAST results are available for this feature:

BLAST of Spo18644.1 vs. NCBI nr
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
BLAST of Spo18644.1 vs. TAIR (Arabidopsis)

BLAST of Spo18644.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902213059\|gb\|KNA17164.1\|	3.6e-250	99.7	hypothetical protein SOVF_0826...	[more]
gi\|731338381\|ref\|XP_010680298.1\|	7.3e-235	92.3	PREDICTED: polypyrimidine trac...	[more]
gi\|359480735\|ref\|XP_002277938.2\|	4.8e-194	76.4	PREDICTED: polypyrimidine trac...	[more]
gi\|720015939\|ref\|XP_010260994.1\|	9.0e-193	76.2	PREDICTED: polypyrimidine trac...	[more]
gi\|702382324\|ref\|XP_010063840.1\|	2.0e-192	76.5	PREDICTED: polypyrimidine trac...	[more]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RDV7_SPIOL	2.5e-250	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8CB36_BETVU	5.1e-235	92.3	Uncharacterized protein OS=Bet...	[more]
F6H4C6_VITVI	3.3e-194	76.4	Putative uncharacterized prote...	[more]
A0A059BYT0_EUCGR	1.4e-192	76.5	Uncharacterized protein OS=Euc...	[more]
A0A059BT87_EUCGR	1.6e-188	75.0	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PTBP3_ARATH	1.1e-182	71.9	Polypyrimidine tract-binding p...	[more]
PTBP1_HUMAN	4.2e-73	36.2	Polypyrimidine tract-binding p...	[more]
PTBP1_BOVIN	7.9e-72	35.1	Polypyrimidine tract-binding p...	[more]
PTBP1_PIG	3.0e-71	35.0	Polypyrimidine tract-binding p...	[more]
PTBP1_RAT	5.1e-71	34.3	Polypyrimidine tract-binding p...	[more]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G43190.1	6.2e-184	71.9	polypyrimidine tract-binding p...	[more]
AT5G53180.1	6.3e-35	31.6	polypyrimidine tract-binding p...	[more]
AT3G01150.1	1.5e-33	38.3	polypyrimidine tract-binding p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 58..108 score: 1.5E-4coord: 422..484 score: 6.7E-7coord: 161..215 score: 6.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 56..125 score: 7.5E-6coord: 308..377 score: 3.1E-13coord: 418..487 score: 1.4E-7coord: 153..222 score:
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 417..491 score: 11.179coord: 307..381 score: 13.089coord: 149..228 score: 9.183coord: 55..129 score: 9
IPR006536	HnRNP-L/PTB	TIGRFAMs	TIGR01649	TIGR01649	coord: 54..492 score: 6.0E
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 304..401 score: 3.9E-23coord: 154..249 score: 9.6E-28coord: 52..138 score: 1.6E-21coord: 406..492 score: 3.5
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 152..249 score: 6.38E-17coord: 51..139 score: 1.33E-17coord: 306..492 score: 4.26
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 151..376 score: 3.1E-71coord: 54..135 score: 3.1
None	No IPR available	PFAM	PF13893	RRM_5	coord: 309..385 score: 2.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0043484	regulation of RNA splicing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding