Spo18958.1 (mRNA) | SpinachBase

Overview


Name	Spo18958.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	chr4 : 19584491 .. 19587663 (+)
Sequence length	933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAATGAGTTTTTTATGATTTGAAATAATCATCTGTTCACTTGTCGCTCACTTGTTCGCCATGGCAGTCCTGCACAGCTCTTAAACCACACTTTCTATCTCCTCAAATTGCCATCATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGGTAATTCAATTACTTCTTCATCATACCTTTATCATATTGCTTGTTCTTCACTAATTCTGTTGATATTTCTGCAATGGGCTTCCTGACATTGAAACAATGCTAATAATAGGGAAAATAATTGGAAAATCTACAGTGGGTTATCGAATTGTTTGTAGTGATATCGTAGAAAGACGAGTAATGCATTGATATTTTAAATGTTGGATAATGTCTCCATACATAGTAGTCTCCAATGGAAATACAGTGTGAAAGTTCTTTTCTTTGATATCATATTCTATTGCAAATCAAAATTTGTCGTTACTTACGTTGAATACCGGTTGAATGCAGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGTAAGTTTTCCAAACCATTTTTACTTTAACAAAGTATAAAAGATAGCTACATTGTGCCGGAGAGCTCAAAAAGTCTGTTCAAGACCTTGTGTTAGTGTTCCTTATTGACATAGAATTTTGAGAATACCTGAAATCCCTTTGAAATTGCATGTTGTTGTGAAGTTGTTTTGTAAATGTATACTTTAGCTAGATACATTGGTTTTTTTTTTTTAAATCCGAGCTGGTCTAGGGTCTATGCCCTCCATCGGAAATGCTCCTTTGATTCTCAAGTCAATATCTGTCTGAACAATATATTATGGTTGATCATTAATTTGTTTTTAAAGGGGAAAAAGTGATAGAGTGGGAAAGCATGCATCAGTTAGTTGTGCATATGTAGCATTGGTATGAGTTGCCTAAAAAGATATTAATAGGTGTGAATGTCGGTTTAGTGGTGTTTTGTCTTGGGCCATTAGCCAGCTCAACTAGGTGATCGCTTGGTTTTAGGAATGAGGCGTTTCACCTGCTTAAGCTTGACAAAATGTGTGCTTTTGAAGATCTTCACCCACTTTCACTTTCTTTCTTTCTTAAGTTGTTGGACCTGGATCTTTAGTGGTTGCAGAAATAGAGCTGATGAAGTGTTAATGTCTTAAACAAAAAAGGCCTAGCGCAAGAACGCCTCACTATTTGTTTACTGGTCTGCTTCAAACTTTATACAGTCCTCGATTGTCAGTTTTTGAAAAGATTTTACTTGATTGAGGCTATATAATTTCGGTTATTCGTAATTTGTTGATGGGATGACATAAGGAGGCAAAGTAGAGTATCTAAGACTGACTAATGAACCTGCTTTTTGGAGTTGCAGTACTAGTGTACGAAAACAATCCTTCTAAATCTGTATCTGAACAGAACTATTTCCTACAAGTCATTTATTGTTCCCAACCTACACCAGATCTTAATCATTTTAAGAAATATGGTTTGTTCTGAAAAAACTAAAAAGTGTGTGCTATGCTTCACGTCTGTATTTGGATCAGCTAAATTAAATTATCAGTTATCTACTTATCTGATCTTTATTGTCAATGGTATATGAAGAGGAGAAAACATGTAAATGCCAGACTACTGTATCTTGCTTGTCTTGTTCTAGGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGGTAAATAAAGTAAAGACAGTCCTTGGTCATGATTTTGTATTCCTGCTCTATTCTAATTTTTACCTTGGAATAGTTCCTTAATGTGTTTGTTGAATACAAAGGGTGTGGCACTACAAGTTCTAGTGCTGATAAAGAAATGTTTTCTTTGTTTTGGTTTGTTGGTTCCTTTAGGGCCTTGGGGAAGGGGGGAAGNGGGGGGGGGGGGGTGGGGGTGGGGTGGCAGGGAGGTTGGGGAGGTCAATTGACGAAAGTTAGTGAGATTGAATTAAATAGTTACTTTTCAGGTGTTAAGATTTTCGGAATTGCTGAAAACGGTTACTAAGAGCAATGTCAAGAATCTATCTGCTTGATGTTAGTTGTTGAAAAGATGCCATGCTTTGATTTTTTAGTTGCATTCTTTCGCTCCTCTTTTGAGCTGGACATTTACTGTGGTACTTTTTTCCTCACTTTCAAGCAGAGTGACTTGTGCAGTTCTTAAGGGGGGGNGGGGGGGGGGGGGGGGTGTAATTTACTGGAAAAAATATCTTGCAAAAACCTTTCATCTTCACTAAAAAATTTGACCTTTCTTGTTCTCTTGTATAATCACGTACAAGAGTATTCAAACATATTGAGTTTTACTCTTTGCTGTACATGCGTAGATTGTGGCCAATTTCTGGTTTAAATCCCTGATATATTAAAATGGTGGTTCATGTTTTCAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTGTATGTTATGCATAAAGTAAATTTGTTGCTTACTTAAAGCATTTGGTAGCTTCTTCATCCTAACTGATTCCTCTATAATGATCTGCTCTGCTGCAATGCAGCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

mRNA sequence

TAAAAATGAGTTTTTTATGATTTGAAATAATCATCTGTTCACTTGTCGCTCACTTGTTCGCCATGGCAGTCCTGCACAGCTCTTAAACCACACTTTCTATCTCCTCAAATTGCCATCATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

Coding sequence (CDS)

ATGAAACTTCCATGGCTGCTACCTTCTAATCTTCCCACTCCAACTACTTCTCTCACTCTCCCCCTTCACTTCACTTTCTCAGCCTCAATTTCTCCTCCTAATTCCACCCTCTTCTTCAAACCTCGATATCTTTTCCCTCTTTCTTCATTCAATCGTCGCAAATTTTCAACATTTTCCTCTTTGAATTCTTCAATTGAACTCAAGGATTCAAATTCAATCGCCCAGAAATATCAGGAGCAACAATTGAATTCGGAAAATCGATCCGAATTTGTGGAAATTAGGAACCCTAATGTTCCGCCTTTTGTCTCGTCGTGGCGTTCTAAGTTCAGCTTGAGTGATCAAGCTTTCTTTTTATTAACATTCATCGCTTGCACGACCTCTGTTGCGTTTATCAGCCTTGTTGCTGCAACTGTTCCTACTTTGTATGCTATGGGAAGAGCTGCTAATTCTTTTGCAAAGCTAGCAGACACTGCTCGAGAGGAGCTCCCCAGTACAGTGGCAGCTATTAGACTTTCAGGCATCGAAATCAGTGACCTTACTGTAGAACTGAGTGACTTAAGCCAAGAGATATCATCAGGAGTCAATAAATCTGCAAAAGCAGTTCAAGCAGCTAAACATGGAGCACGACAGATTGGCTCTATTGCTCGTGAACAGACTATGTCAATGATCCATGAGAGGGCGAACCTTCCTGCCATCTCATTTCAACCAGTTGTTTCTGGCGCTGCAAAAAAGACCTCTCGTGCAATTGGCCATGCTACAAAGACCTTAATGAATTTAATTTCTGGAGGAGAGACCATCTCTGAAGAAAACGAATGA

Protein sequence

MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSSLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18958	Spo18958	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18958.1	Spo18958.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18958.1.exon.1	Spo18958.1.exon.1	exon
Spo18958.1.exon.2	Spo18958.1.exon.2	exon
Spo18958.1.exon.3	Spo18958.1.exon.3	exon
Spo18958.1.exon.4	Spo18958.1.exon.4	exon
Spo18958.1.exon.5	Spo18958.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18958.1.utr5p.1	Spo18958.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18958.1.CDS.1	Spo18958.1.CDS.1	CDS
Spo18958.1.CDS.2	Spo18958.1.CDS.2	CDS
Spo18958.1.CDS.3	Spo18958.1.CDS.3	CDS
Spo18958.1.CDS.4	Spo18958.1.CDS.4	CDS
Spo18958.1.CDS.5	Spo18958.1.CDS.5	CDS

Homology

[Close]

BLAST of Spo18958.1 vs. NCBI nr
Match: gi|902153190|gb|KNA05677.1| (hypothetical protein SOVF_188100 [Spinacia oleracea])

HSP 1 Score: 498.8 bits (1283), Expect = 5.900e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1

		  
Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS
Sbjct: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT
Sbjct: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT
Sbjct: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG
Sbjct: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AAKKTSRAIGHATKTLMNLISGGETISEENE
Sbjct: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 271

[Close]

BLAST of Spo18958.1 vs. NCBI nr
Match: gi|731326801|ref|XP_010674203.1| (PREDICTED: uncharacterized protein LOC104890420 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 367.1 bits (941), Expect = 2.700e-98
Identity = 208/271 (76.75%), Postives = 229/271 (84.50%), Query Frame = 1

		  
Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLP LLPS   T TTSLTL  HF  S S SP NS +F KPR   PLSSF RRK ST  S
Sbjct: 1   MKLPLLLPS---THTTSLTLLPHFIISTSNSPHNSRVFLKPRNFSPLSSFTRRKSSTLVS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSS EL DSNSI ++ Q Q+ +S+NR+EFVEI+NPN PPF+SSWRSKFS SDQAFFLLT
Sbjct: 61  LNSSNELNDSNSITEEIQTQRYDSDNRAEFVEIKNPNFPPFISSWRSKFSFSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAF+  VAA VPTLYAMGRAANSFAKLADTAREELPST+ AIRLSGIE+SDLT
Sbjct: 121 FIACTTSVAFVGFVAAAVPTLYAMGRAANSFAKLADTAREELPSTMTAIRLSGIEVSDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEIS GVNKSA+AVQAAK G +QIGSIAREQT+SMI ERA+LP IS QPVVSG
Sbjct: 181 VELSDLSQEISEGVNKSAQAVQAAKLGMQQIGSIAREQTISMIQERASLPVISMQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AA+KTSRA+GHAT+TLMN ISG E+I+EE E
Sbjct: 241 AARKTSRAVGHATRTLMNFISGRESIAEETE 268

[Close]

BLAST of Spo18958.1 vs. NCBI nr
Match: gi|566199502|ref|XP_002319133.2| (hypothetical protein POPTR_0013s04950g [Populus trichocarpa])

HSP 1 Score: 256.5 bits (654), Expect = 5.100e-65
Identity = 163/273 (59.71%), Postives = 204/273 (74.73%), Query Frame = 1

		  
Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA SF+KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSFSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNIISRGEFNSENED 274

[Close]

BLAST of Spo18958.1 vs. NCBI nr
Match: gi|743873614|ref|XP_011034438.1| (PREDICTED: uncharacterized protein LOC105132565 [Populus euphratica])

HSP 1 Score: 255.0 bits (650), Expect = 1.500e-64
Identity = 162/273 (59.34%), Postives = 204/273 (74.73%), Query Frame = 1

		  
Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+  P HF   ++ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPHPNHFL--SAISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+ D++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLDADEM-----ERNLN-------VQVGNPVVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA S +KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSLSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNMISRGEFNSENED 274

[Close]

BLAST of Spo18958.1 vs. NCBI nr
Match: gi|224123658|ref|XP_002319134.1| (hypothetical protein POPTR_0013s04950g [Populus trichocarpa])

HSP 1 Score: 248.4 bits (633), Expect = 1.400e-62
Identity = 163/283 (57.60%), Postives = 204/283 (72.08%), Query Frame = 1

		  
Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLY----------AMGRAANSFAKLADTAREELPSTVAA 185
           L+FIACTTS+AF SLV A VPTLY          AMG+AA SF+KLADTAREELPST+AA
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYVSYLTLHLSAAMGKAATSFSKLADTAREELPSTMAA 199

Query: 186 IRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERAN 245
           IRLSG+EISDLT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+
Sbjct: 200 IRLSGMEISDLTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERAS 259

Query: 246 LPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           LP IS QPVV+GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 LPIISLQPVVAGAAKKTSRAVGQATKTIMNIISRGEFNSENED 284

[Close]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188100 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 4.100e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1

		  
Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS
Sbjct: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT
Sbjct: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT
Sbjct: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG
Sbjct: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AAKKTSRAIGHATKTLMNLISGGETISEENE
Sbjct: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 271

[Close]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP99_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076980 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.900e-98
Identity = 208/271 (76.75%), Postives = 229/271 (84.50%), Query Frame = 1

		  
Query: 1   MKLPWLLPSNLPTPTTSLTLPLHFTFSASISPPNSTLFFKPRYLFPLSSFNRRKFSTFSS 60
           MKLP LLPS   T TTSLTL  HF  S S SP NS +F KPR   PLSSF RRK ST  S
Sbjct: 1   MKLPLLLPS---THTTSLTLLPHFIISTSNSPHNSRVFLKPRNFSPLSSFTRRKSSTLVS 60

Query: 61  LNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLLT 120
           LNSS EL DSNSI ++ Q Q+ +S+NR+EFVEI+NPN PPF+SSWRSKFS SDQAFFLLT
Sbjct: 61  LNSSNELNDSNSITEEIQTQRYDSDNRAEFVEIKNPNFPPFISSWRSKFSFSDQAFFLLT 120

Query: 121 FIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDLT 180
           FIACTTSVAF+  VAA VPTLYAMGRAANSFAKLADTAREELPST+ AIRLSGIE+SDLT
Sbjct: 121 FIACTTSVAFVGFVAAAVPTLYAMGRAANSFAKLADTAREELPSTMTAIRLSGIEVSDLT 180

Query: 181 VELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVSG 240
           VELSDLSQEIS GVNKSA+AVQAAK G +QIGSIAREQT+SMI ERA+LP IS QPVVSG
Sbjct: 181 VELSDLSQEISEGVNKSAQAVQAAKLGMQQIGSIAREQTISMIQERASLPVISMQPVVSG 240

Query: 241 AAKKTSRAIGHATKTLMNLISGGETISEENE 272
           AA+KTSRA+GHAT+TLMN ISG E+I+EE E
Sbjct: 241 AARKTSRAVGHATRTLMNFISGRESIAEETE 268

[Close]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9I5T4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04950g PE=4 SV=2)

HSP 1 Score: 256.5 bits (654), Expect = 3.600e-65
Identity = 163/273 (59.71%), Postives = 204/273 (74.73%), Query Frame = 1

		  
Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISD 185
           L+FIACTTS+AF SLV A VPTLYAMG+AA SF+KLADTAREELPST+AAIRLSG+EISD
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYAMGKAATSFSKLADTAREELPSTMAAIRLSGMEISD 199

Query: 186 LTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVV 245
           LT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+LP IS QPVV
Sbjct: 200 LTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVV 259

Query: 246 SGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           +GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 AGAAKKTSRAVGQATKTIMNIISRGEFNSENED 274

[Close]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9I5T5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04950g PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.700e-63
Identity = 163/283 (57.60%), Postives = 204/283 (72.08%), Query Frame = 1

		  
Query: 6   LLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNR--RKFSTFS--- 65
           L  +++P P  S+ LP HF   + ISP PNS+   +P  L P+ S +   RK ST +   
Sbjct: 20  LTRNSIPFPRNSIPLPNHFL--SVISPHPNSS---RPSRLIPICSSSNPTRKQSTSTNEQ 79

Query: 66  -SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFL 125
            SLNS++E+  ++ +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFL
Sbjct: 80  VSLNSNVEVLGADEL-----ERNLN-------VQVGNPIVPNYIQSW-TKLSLSDQAFFL 139

Query: 126 LTFIACTTSVAFISLVAATVPTLY----------AMGRAANSFAKLADTAREELPSTVAA 185
           L+FIACTTS+AF SLV A VPTLY          AMG+AA SF+KLADTAREELPST+AA
Sbjct: 140 LSFIACTTSIAFTSLVVAAVPTLYVSYLTLHLSAAMGKAATSFSKLADTAREELPSTMAA 199

Query: 186 IRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERAN 245
           IRLSG+EISDLT+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + TMSMI ERA+
Sbjct: 200 IRLSGMEISDLTLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGALAHQHTMSMIQERAS 259

Query: 246 LPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           LP IS QPVV+GAAKKTSRA+G ATKT+MN+IS GE  SE  +
Sbjct: 260 LPIISLQPVVAGAAKKTSRAVGQATKTIMNIISRGEFNSENED 284

[Close]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Match: B9NDH9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s04580g PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.000e-60
Identity = 154/272 (56.62%), Postives = 200/272 (73.53%), Query Frame = 1

		  
Query: 3   LPWLLPSNLPTPTTSLTLPLHFTFSASISP-PNSTLFFKPRYLFPLSSFNRRKFSTFS-- 62
           L  L  +++P P  S+  P HF   + +SP PNS+  ++   +   S+  R++ S  +  
Sbjct: 17  LTLLSRNSIPFPRNSIPHPNHFL--SIVSPHPNSSKHYRLLPICSSSNPARKQSSPANEE 76

Query: 63  SLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEIRNPNVPPFVSSWRSKFSLSDQAFFLL 122
           SLNS++E+   + +     E+ LN       V++ NP VP ++ SW +K SLSDQAFFLL
Sbjct: 77  SLNSNVEVLGGDEL-----ERNLN-------VQVANPVVPSYIQSW-TKLSLSDQAFFLL 136

Query: 123 TFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTVAAIRLSGIEISDL 182
           +FIA TTS+AF  LVAA VPTL+A+GRAA S +KLADTAREELPST+AAIRLSG+EISDL
Sbjct: 137 SFIAFTTSIAFTCLVAAAVPTLFAVGRAATSLSKLADTAREELPSTMAAIRLSGMEISDL 196

Query: 183 TVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHERANLPAISFQPVVS 242
           T+ELSDLSQEI+ GVNKSA+AVQAA+ G RQIG++A + T+SMI ERA+LP IS QPVV+
Sbjct: 197 TLELSDLSQEITDGVNKSAQAVQAAEAGIRQIGTLAHQHTISMIQERASLPIISLQPVVA 256

Query: 243 GAAKKTSRAIGHATKTLMNLISGGETISEENE 272
           GAAKKTSRA+G ATKT+MN+IS GE  +EE E
Sbjct: 257 GAAKKTSRAVGQATKTIMNIISRGEFNTEEKE 273

[Close]

BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Match: AT1G08530.1 (unknown protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.600e-56
Identity = 117/157 (74.52%), Postives = 138/157 (87.90%), Query Frame = 1

		  
Query: 107 SKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFAKLADTAREELPSTV 166
           +K SLSDQAF LL FI CTTSVAF SLV   +PTL AMGRAA SFAKLADTAR+ELPST+
Sbjct: 96  AKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAMGRAATSFAKLADTARKELPSTL 155

Query: 167 AAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQIGSIAREQTMSMIHER 226
           AA+RLSG+EISDLT+ELSDLSQ+I+ G+NKSAKAVQAA+ G +QIG++A++QT+SMI ER
Sbjct: 156 AAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAAEAGIKQIGTLAQQQTLSMIEER 215

Query: 227 ANLPAISFQPVVSGAAKKTSRAIGHATKTLMNLISGG 264
           ANLP IS QPVV+GAA+KTS AIG ATK LMN+I+GG
Sbjct: 216 ANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITGG 252

[Close]

BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Match: AT5G09995.2 (unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.600e-16
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 1

		  
Query: 34  NSTLFFKPRYLFPLSSFNRRKFSTFSSLNSSIELKDSNSIAQKYQEQQLNSENRSEFVEI 93
           +  L F+ R    L+S      S  +  + SI     +++    QE  ++S+  S   + 
Sbjct: 27  DKNLSFRRRVTLRLAS----PISRLTKGSDSIASSTPSALYSNPQEPSISSQLTSSVGQ- 86

Query: 94  RNPNVPPF-VSSWRSKFSLSDQAFFLLTFIACTTSVAFISLVAATVPTLYAMGRAANSFA 153
                PP  +S W    + + + F LL  +AC T+++   L  A +PTL A  +AA S  
Sbjct: 87  -----PPLQLSQW----TFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLE 146

Query: 154 KLADTAREELPSTVAAIRLSGIEISDLTVELSDLSQEISSGVNKSAKAVQAAKHGARQI 212
           KL D  REELP T+AA+RLSG+EISDLT+ELSDL Q I+ GV  S +A++ A+   R++
Sbjct: 147 KLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRL 191

The following BLAST results are available for this feature:

BLAST of Spo18958.1 vs. NCBI nr
BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
BLAST of Spo18958.1 vs. ExPASy Swiss-Prot
BLAST of Spo18958.1 vs. TAIR (Arabidopsis)

BLAST of Spo18958.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902153190\|gb\|KNA05677.1\|	5.9e-138	100.	hypothetical protein SOVF_1881...	[more]
gi\|731326801\|ref\|XP_010674203.1\|	2.7e-98	76.7	PREDICTED: uncharacterized pro...	[more]
gi\|566199502\|ref\|XP_002319133.2\|	5.1e-65	59.7	hypothetical protein POPTR_001...	[more]
gi\|743873614\|ref\|XP_011034438.1\|	1.5e-64	59.3	PREDICTED: uncharacterized pro...	[more]
gi\|224123658\|ref\|XP_002319134.1\|	1.4e-62	57.6	hypothetical protein POPTR_001...	[more]

BLAST of Spo18958.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QEJ0_SPIOL	4.1e-138	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CP99_BETVU	1.9e-98	76.7	Uncharacterized protein OS=Bet...	[more]
B9I5T4_POPTR	3.6e-65	59.7	Uncharacterized protein OS=Pop...	[more]
B9I5T5_POPTR	9.7e-63	57.6	Uncharacterized protein OS=Pop...	[more]
B9NDH9_POPTR	2.0e-60	56.6	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo18958.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo18958.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G08530.1	1.6e-56	74.5	unknown protein	[more]
AT5G09995.2	1.6e-16	36.3	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33825	FAMILY NOT NAMED	coord: 11..271 score: 7.2E
None	No IPR available	PANTHER	PTHR33825:SF5	SUBFAMILY NOT NAMED	coord: 11..271 score: 7.2E