Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTATAGAGAGGAAGGTGGCAATATCTCTTGGTGTACTATAAATTCCAATCCCCATTTCTCAATTTACTCGTTGTCTAAGTCTCTAAGATCTCATTCTAGTTTTAGCAACCCACCTAACCCCACTCTCTCCCCTCTTCCCCTCCCTCTCCCTACTCTCCGCTTCTCAATTCTCAATTCTCAATTCTCAAGATAATGTTTTCAATATCCTCTATCCACCCAATTGCCACCGCCAAGCACCACTCAAAACAACCCCTACTTCAACAACAAAAACAACAATGCTCTGCTCCCTATGTCAACACAACTCCTTCCCACCTCTCTCTCCCTCTCCGTATAAAACACCTCCACGCTCGCTGCGCCGCCTCTGACTCCGTGTTCAACCACGATATTGGTGTGCCTTTTGTCTCAACACGCGCTTCCGGCGAGGTGCCGGAGGTTAACAGTAGAGATATTAAGCTTAAGATCGCGATCATTGGGTTCGGGAACTTTGGTCAGTTTTTGGCTAAGACTATTACTAAGCAAGGTCACAGAGTTTTGGCTTACTCCCGGTCAGATTACTCCCGTGCTGCTAAGGAGATCGGCGTCGAGTATTTCTCCGACGCCGATGATCTTTGCGAAGAGCATCCCGAGGTATGCTTTTACTCACCTATACTGTTTTAAGATGTTCGCTAAATTATACGAAGTATTAATTTAAGTTGGGCTGTACGTAGCTAGTAGGGTACGTTTCAATTATTTTGCTAGTGACTTTTTTTAATGTACAATACTTTAAGTAATTAGTTGGTCAGTAGTTAAATTTTGGTCTCAATTCGGTCAAGGTTAGTGGACTAAATATTTTTTTATTTTTTTATTTTTTTGGTGCGAAGTGGACTAAATATTTTAAGAGTAGTACTCCCGTCGTCTCTTAGTATTTGACCTGTTTCTAAAAATGAAAATATTCTAACAATATTATATTATTTCTCACTCCACTCTATTAACCCAATTACCCCTACTCCATACAAAAAATAATTAAAAATTCAACACCTACTCTCCCCCAACCCCACCTCTTAACACATTTCCCACTAACTACATTAAAATAATACACCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTACCTTAAACTCTGTGCCAGTCAAACCGGGTCGAGTATTCCGGGACGGAGGGAGTAATATTTTAGTCTGTTTGGATAAGACAATGCCTCTTACCTATATATGAAATATATATCTACAACTTCAAACTAACTCTACCTATAAGTTAAAATTAAATAACAAATTGAGATTGATTTAGTTAATGAACGTTTATGAAATTGGGAAGAAGAGATTTGAAATATAGGAGTAGAGCCATACAGGATTCATACAGGCCATCAATGTACTGATAAGACATTATTAATGTTTTTGTTTAATTTTTTTGGAAAAGAGAAGATGAAAAAAGAAAAGAATATGATGCCAAATTGACATAAAGTAGCATTATGTAAAATTTAACGAAAGCTTTTTTCTTTGACTATGTGATTATTTAGAAATAGTTAAATAGACGCGAGAAACTCAATAATTCTCTTACCTATTTGTAATTTATTAGTCCTTGCTCATTTACAAAAAAAAAAAATTAAAAAAAAAATTACAATTATTACTTCGTATTGTTTAGCAAAATAACATTATATGAGAGCATTAGTCTAATTTTGTGCTTTAATTTTACTTTTATCCAGGTGATACTCCTATGCACTTCAATCCTCTCAACAGAGAAGGTCCTCCGTTCGCTCCCCCTCCACCGCCTTCGCCGGTCCACCCTCTTCGTGGACGTCCTCTCGGTGAAGGAGTTCCCGCGTTCACTTTTCCTCCAAGTCCTTCCTAAAGACTTTGACATCCTTTGCACCCACCCCATGTTCGGCCCAGACTCAGGCAAAAGCGGATGGGGTGGGCTCCCCTTTGTCTTCGACAAAGTCCGAGTCGGGTCGGACCCAACCCGGGCGGCTCGGACTGAGGCGTTCCTAGACATTTATAGGAACGCCGGGTGTAGGATGGTGGAAATGACATGCGCGGACCACGACAAGCACGCGGCTGGGTCGCAATTCATAACCCACATGATGGGCCGGGTTTTGGAGAAATTAGCCCTCGAAAACACACCGATTAACACGAAAGGGTACGAGAGTTTGTTGAACTTGGTGGATAATACGGCCCGGGACAGCTTTGAGTTGTTTTACGGACTGTTTTTGTACAACAAGAACGCGATGGAACAATTGGATAGAATGGATTGGGCTTTCGAGATGGTAAAGAAGCAACTTTCGGGTTATTTGCATGATCTTGTTAGGAAACAATTGATGCTAGAGACTACCAATGAACAAGTTGGGTTTGATCAGACGTTCATGCTTCCTTCTCCTGCCGATAATCCTCGTCAAACACCACCCTCGGCTGCCGTTTCCGAGAATTCGAAACCCGATTTTGTGGTGGTAAATGGTAATAATTCTAGATAGTGTTAGCATAAAAACGACGACAACCACAATGACGACAACATAGTCCCGGTATTGTATTAAGACAATAGAGTTGGAGTTCGGGTTGATATTATTTGGGCCGCGGGTTCCTAAATCCATTTCAGCCTCATTAACTTCATTTTTTTGTTACTTGGAGATGGTGATCGAATGTATTAAGCATGTAGTATAATACTCCGTATTACTTTAAATCAAGCTAAATATAATAAAAGCTTTTCATTTTGTGTAGAAAGTTTCATGGGGTTGATATATAAATGTATAAATCATGAAATTTTGATGAATTTTTTTATGTGTTGGCTATATGGTCCTATTTTTTTGGACTTTAT GTCTATAGAGAGGAAGGTGGCAATATCTCTTGGTGTACTATAAATTCCAATCCCCATTTCTCAATTTACTCGTTGTCTAAGTCTCTAAGATCTCATTCTAGTTTTAGCAACCCACCTAACCCCACTCTCTCCCCTCTTCCCCTCCCTCTCCCTACTCTCCGCTTCTCAATTCTCAATTCTCAATTCTCAAGATAATGTTTTCAATATCCTCTATCCACCCAATTGCCACCGCCAAGCACCACTCAAAACAACCCCTACTTCAACAACAAAAACAACAATGCTCTGCTCCCTATGTCAACACAACTCCTTCCCACCTCTCTCTCCCTCTCCGTATAAAACACCTCCACGCTCGCTGCGCCGCCTCTGACTCCGTGTTCAACCACGATATTGGTGTGCCTTTTGTCTCAACACGCGCTTCCGGCGAGGTGCCGGAGGTTAACAGTAGAGATATTAAGCTTAAGATCGCGATCATTGGGTTCGGGAACTTTGGTCAGTTTTTGGCTAAGACTATTACTAAGCAAGGTCACAGAGTTTTGGCTTACTCCCGGTCAGATTACTCCCGTGCTGCTAAGGAGATCGGCGTCGAGTATTTCTCCGACGCCGATGATCTTTGCGAAGAGCATCCCGAGGTGATACTCCTATGCACTTCAATCCTCTCAACAGAGAAGGTCCTCCGTTCGCTCCCCCTCCACCGCCTTCGCCGGTCCACCCTCTTCGTGGACGTCCTCTCGGTGAAGGAGTTCCCGCGTTCACTTTTCCTCCAAGTCCTTCCTAAAGACTTTGACATCCTTTGCACCCACCCCATGTTCGGCCCAGACTCAGGCAAAAGCGGATGGGGTGGGCTCCCCTTTGTCTTCGACAAAGTCCGAGTCGGGTCGGACCCAACCCGGGCGGCTCGGACTGAGGCGTTCCTAGACATTTATAGGAACGCCGGGTGTAGGATGGTGGAAATGACATGCGCGGACCACGACAAGCACGCGGCTGGGTCGCAATTCATAACCCACATGATGGGCCGGGTTTTGGAGAAATTAGCCCTCGAAAACACACCGATTAACACGAAAGGGTACGAGAGTTTGTTGAACTTGGTGGATAATACGGCCCGGGACAGCTTTGAGTTGTTTTACGGACTGTTTTTGTACAACAAGAACGCGATGGAACAATTGGATAGAATGGATTGGGCTTTCGAGATGGTAAAGAAGCAACTTTCGGGTTATTTGCATGATCTTGTTAGGAAACAATTGATGCTAGAGACTACCAATGAACAAGTTGGGTTTGATCAGACGTTCATGCTTCCTTCTCCTGCCGATAATCCTCGTCAAACACCACCCTCGGCTGCCGTTTCCGAGAATTCGAAACCCGATTTTGTGGTGGTAAATGGTAATAATTCTAGATAGTGTTAGCATAAAAACGACGACAACCACAATGACGACAACATAGTCCCGGTATTGTATTAAGACAATAGAGTTGGAGTTCGGGTTGATATTATTTGGGCCGCGGGTTCCTAAATCCATTTCAGCCTCATTAACTTCATTTTTTTGTTACTTGGAGATGGTGATCGAATGTATTAAGCATGTAGTATAATACTCCGTATTACTTTAAATCAAGCTAAATATAATAAAAGCTTTTCATTTTGTGTAGAAAGTTTCATGGGGTTGATATATAAATGTATAAATCATGAAATTTTGATGAATTTTTTTATGTGTTGGCTATATGGTCCTATTTTTTTGGACTTTAT ATGTTTTCAATATCCTCTATCCACCCAATTGCCACCGCCAAGCACCACTCAAAACAACCCCTACTTCAACAACAAAAACAACAATGCTCTGCTCCCTATGTCAACACAACTCCTTCCCACCTCTCTCTCCCTCTCCGTATAAAACACCTCCACGCTCGCTGCGCCGCCTCTGACTCCGTGTTCAACCACGATATTGGTGTGCCTTTTGTCTCAACACGCGCTTCCGGCGAGGTGCCGGAGGTTAACAGTAGAGATATTAAGCTTAAGATCGCGATCATTGGGTTCGGGAACTTTGGTCAGTTTTTGGCTAAGACTATTACTAAGCAAGGTCACAGAGTTTTGGCTTACTCCCGGTCAGATTACTCCCGTGCTGCTAAGGAGATCGGCGTCGAGTATTTCTCCGACGCCGATGATCTTTGCGAAGAGCATCCCGAGGTGATACTCCTATGCACTTCAATCCTCTCAACAGAGAAGGTCCTCCGTTCGCTCCCCCTCCACCGCCTTCGCCGGTCCACCCTCTTCGTGGACGTCCTCTCGGTGAAGGAGTTCCCGCGTTCACTTTTCCTCCAAGTCCTTCCTAAAGACTTTGACATCCTTTGCACCCACCCCATGTTCGGCCCAGACTCAGGCAAAAGCGGATGGGGTGGGCTCCCCTTTGTCTTCGACAAAGTCCGAGTCGGGTCGGACCCAACCCGGGCGGCTCGGACTGAGGCGTTCCTAGACATTTATAGGAACGCCGGGTGTAGGATGGTGGAAATGACATGCGCGGACCACGACAAGCACGCGGCTGGGTCGCAATTCATAACCCACATGATGGGCCGGGTTTTGGAGAAATTAGCCCTCGAAAACACACCGATTAACACGAAAGGGTACGAGAGTTTGTTGAACTTGGTGGATAATACGGCCCGGGACAGCTTTGAGTTGTTTTACGGACTGTTTTTGTACAACAAGAACGCGATGGAACAATTGGATAGAATGGATTGGGCTTTCGAGATGGTAAAGAAGCAACTTTCGGGTTATTTGCATGATCTTGTTAGGAAACAATTGATGCTAGAGACTACCAATGAACAAGTTGGGTTTGATCAGACGTTCATGCTTCCTTCTCCTGCCGATAATCCTCGTCAAACACCACCCTCGGCTGCCGTTTCCGAGAATTCGAAACCCGATTTTGTGGTGGTAAATGGTAATAATTCTAGATAG MFSISSIHPIATAKHHSKQPLLQQQKQQCSAPYVNTTPSHLSLPLRIKHLHARCAASDSVFNHDIGVPFVSTRASGEVPEVNSRDIKLKIAIIGFGNFGQFLAKTITKQGHRVLAYSRSDYSRAAKEIGVEYFSDADDLCEEHPEVILLCTSILSTEKVLRSLPLHRLRRSTLFVDVLSVKEFPRSLFLQVLPKDFDILCTHPMFGPDSGKSGWGGLPFVFDKVRVGSDPTRAARTEAFLDIYRNAGCRMVEMTCADHDKHAAGSQFITHMMGRVLEKLALENTPINTKGYESLLNLVDNTARDSFELFYGLFLYNKNAMEQLDRMDWAFEMVKKQLSGYLHDLVRKQLMLETTNEQVGFDQTFMLPSPADNPRQTPPSAAVSENSKPDFVVVNGNNSR Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo19157.1 vs. NCBI nr
Match: gi|902162035|gb|KNA06623.1| (hypothetical protein SOVF_179330 [Spinacia oleracea]) HSP 1 Score: 805.8 bits (2080), Expect = 3.300e-230 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1
BLAST of Spo19157.1 vs. NCBI nr
Match: gi|731353034|ref|XP_010687851.1| (PREDICTED: arogenate dehydrogenase 2, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 599.7 bits (1545), Expect = 3.600e-168 Identity = 312/403 (77.42%), Postives = 337/403 (83.62%), Query Frame = 1
BLAST of Spo19157.1 vs. NCBI nr
Match: gi|731353040|ref|XP_010687854.1| (PREDICTED: arogenate dehydrogenase 2, chloroplastic-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 444.9 bits (1143), Expect = 1.500e-121 Identity = 222/342 (64.91%), Postives = 267/342 (78.07%), Query Frame = 1
BLAST of Spo19157.1 vs. NCBI nr
Match: gi|731353042|ref|XP_010687855.1| (PREDICTED: arogenate dehydrogenase 2, chloroplastic-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 443.4 bits (1139), Expect = 4.300e-121 Identity = 214/303 (70.63%), Postives = 252/303 (83.17%), Query Frame = 1
BLAST of Spo19157.1 vs. NCBI nr
Match: gi|902110602|gb|KNA03712.1| (hypothetical protein SOVF_206530 [Spinacia oleracea]) HSP 1 Score: 441.0 bits (1133), Expect = 2.200e-120 Identity = 211/292 (72.26%), Postives = 244/292 (83.56%), Query Frame = 1
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIW7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_179330 PE=4 SV=1) HSP 1 Score: 805.8 bits (2080), Expect = 2.300e-230 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN87_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193180 PE=4 SV=1) HSP 1 Score: 599.7 bits (1545), Expect = 2.500e-168 Identity = 312/403 (77.42%), Postives = 337/403 (83.62%), Query Frame = 1
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BS63_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193190 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 1.000e-121 Identity = 222/342 (64.91%), Postives = 267/342 (78.07%), Query Frame = 1
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8V3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_206530 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.500e-120 Identity = 211/292 (72.26%), Postives = 244/292 (83.56%), Query Frame = 1
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Match: M5VXJ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002326mg PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 7.400e-120 Identity = 212/307 (69.06%), Postives = 255/307 (83.06%), Query Frame = 1
BLAST of Spo19157.1 vs. ExPASy Swiss-Prot
Match: TYRA1_ARATH (Arogenate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT1 PE=1 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.300e-109 Identity = 198/299 (66.22%), Postives = 238/299 (79.60%), Query Frame = 1
BLAST of Spo19157.1 vs. ExPASy Swiss-Prot
Match: TYRA2_ARATH (Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 4.400e-105 Identity = 177/262 (67.56%), Postives = 217/262 (82.82%), Query Frame = 1
BLAST of Spo19157.1 vs. TAIR (Arabidopsis)
Match: AT5G34930.1 (arogenate dehydrogenase) HSP 1 Score: 397.9 bits (1021), Expect = 7.400e-111 Identity = 198/299 (66.22%), Postives = 238/299 (79.60%), Query Frame = 1
BLAST of Spo19157.1 vs. TAIR (Arabidopsis)
Match: AT1G15710.1 (prephenate dehydrogenase family protein) HSP 1 Score: 382.9 bits (982), Expect = 2.500e-106 Identity = 177/262 (67.56%), Postives = 217/262 (82.82%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19157.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19157.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19157.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo19157.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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