Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTGGGAGAGAAGTGACGGTGAATGACATGATGATGAGGACAAGCGTGACACTGTGATAGCATCATTCCCATGTCCAAGGACTCCAAATCAATTTTAGCCAGCTACTCCGGCTTAACAACCTTAGACGCCATCCTTTACGTATTAGACTCTAATTACAGTAACTAATCCGTAATTACCAGTTTAATTAACCCCAACTAATTCAATGTACCATACTTACTATAAATAACCACCCACTTCTCCATTTCCTTTTCGTCAACGCACATCAATTTCATTCCATCACTTCGCATAATTGCTGCAAAAGAAGGCCGGGATTAAGAGAGAGAAACAAAGGAGCGAGTTTTAGGGAGAGAAAAACAGCGAGTCAACTACTGTCCATTTCAAACTTCGATCTCCAATGGCAACCAAAGTTTACATTGTGTATGTTTCTTCTCTCTCCTCATTTTTTCTGTTCAATTTTATTTTTGCCGATATTTTGAAATGTTTACTTCTTTGTTGTTATTTGTAATGTAAATTTGATTATGTTAATTTCCTCGATGATCGCGCTTGATTATGATCTTCATCTGATTACCCTGGAATTTTTTCTGAACTTTAGCATATTTGAATTTTGAAGTTCAATTTACTCAGAATATTTGCACGTATATTATTGTGCTCAATTTTTAGCAGTAATTTAGTGATTTTTTTTAATGAATTGCTCATTTGTGCTGATTAATTATTACGATATTTTGCTGAAACTCGCGACATTATTATGAGAGTAGTTTATTGGTTGATTCATGAGTTAAGTGAATTATTTCGGGAGTTAGTTTTGATCAGTAAAAATCAATGATAACATTTTTTTTTTTGAAGGAAATCAATGATAACATTTTGAAGTAAACGTTAGTAAGATCAGCTTTGATTAGTAAACAACTAAACATCAATTTTAGCTTACAAAATCAGTTTAAATTGGCGAGGAATAGTTTCAAATAGAAATGATCATTTCAGATCAGGTTTTATAAGCAAAAGTAAAAATAGTTTAATATGTTATGGAGTATAAACCTCGCTCCTCACTGGAATCGGAAACAACCTGCAATGATAGGGGTAAGGTTGCGTTCCAACCCCCTCACCGGGCATGTTGCGGGAGCCTCTTTGCAGGCACTGAGTAACGATAATGAATGGATTTATAATATACTTGTTATGGAGTAATAATCGCTTGATCAGGGTGAAAATCAAGTGAAGGACTTGGGCAGGAGAACGGAATGGTATTCTGGATACAAGGAAATGATGGATTGTGTCAATATTAAAAATGTGTTGTAGAAATGATAAGAAAACAATGGATTAAAACTTAGCTGTCTAAATATAGTCATAACTATTTATCTTCGGGGTAGGAGGATGTGCGGGCTTTAGAACTTGATAAGCGACTTCTACATTTGTTAGTGATTGAGTAATTTTACTGGTAGAACACTAGTTTTAGATTTTGTACAATTGAAGATCTTGGTTGTAGTTTAGTGACGAGTTCAGGTTGCATAGACAATTCCGGTCTGTCATTATGTATGAGAATATAAGCTAGCTCTCGTGGAGTTTTTGGAGCTAATGTATTACTCCGTACTGCGTAGTGCCGTAGTATCATGTTAGATAATAATAACTGGTCCTGTCTGTTGATTTCATAGCGGGGCCTTGCCTTGTTAACATCAGATGACGCTCCTTGTTATGGAAAATGTAGTACAGCATTTAAATGCTTTTGTTCCTCCTATGTGTTATGTCTAATTAGTTTTAAAAAAAAATTAGGGGTACATTTTCAAATTGAAAGTCGATAATTGAATTCGTATAGTTCATTCTTTTTGTTTTTCCTTTCTGTCCTTGGAATAAACGAAAAATTTCTGAATGACATTAGGCAATTGTGAGGATTTCCTATAGTGAATGCAACAGTGTTGTCTCTGAATAGTCTAGGTAGTTGGGACCCTTGGAGGTGTGATTTGTTTCTGAAGAACATATGTTTAGGGAGCAGTCCTGAATCCTGATGCATTTTATTGGACACTACTTCACTCATCCATGACATTTAAGTAGCGTTAATAGTTAATAGCTGTATCTTATGACAATCTGAAAATATTAGTTTGTTTCTCATTGAGGTACTTGCGCAACTGCTCCTGTCTTGGCAGGGAACTGACCATGCTTTCTTTGATGCATATAGACAGACTGAGTTTTCATGTATGCAATGTTTCAGTCATCACAATCTTGTTTTATTGCAAGGTAGAATGACATTAACAGCTCAGCTACTTGTAGTTTCATGTAAAATAACTTTCTGACTATAAGGAAAGACCACAATTAGAAATCTCACAGCAGTGTCAATAAGAGATTTCCAATTAGCAAGCGTCGTTGTATTTTCCAGTTGTCTTCGCCTCAGTTTGTCTTACAAAAGTCTCTTAAAAGTTTGAGGAGGTTTTCAACATAAGTTCTATATTGTTTTTCAGGTACTATTCTATGTACGGACACGTACACAAGCTGGCAGAGGAGATCCAGAAAGGAGCTGCATCTGTTGAAGGTGTAGAGGCTAAACTCTGGCAGGTAAACATCAGTTGTACTTGTTGCCTTCTAAGATCATTTTAACTAATAAAATTTATTAGACCGGGGATATATTTTAGCGGGTAAACCATCTATTAAATTCTCTAGACTAGTATGAATTATGAAGTGACCACGAGACTCTTTTAAGTTCTAACCATGTACCTAAGACAAGCGGCCTCAAGCACAACTGTGCAACTGTGTACTCTTTTTTTGTTTTCGCATGCGTTTTTTATTGTCATTTATTGACATCATCTCCTGGTCTAGTTTACTCCAAGCAATCATCGTTAACTACAGGGATGAGAATGGCTATACATAGACACGCAGTAAGTGGCCAGTTTGTTGAGTCTAAATCGACGAAGACACTATCCTGTAAACTTGATATTGATGTATCTGTGCAAGGTGGTGATATAGGTTGTTGAGCTCTACTTTGTGATGTAAAAAATCAAAATATACTCTTGCTTGCAATATCACTAACTCTGCAAATGCCTTTTAATTTAAGTTTTAATTAATGGAATTTCTGACCCCGTTGCCTTGGCCTTGCTTCCCTACTGTTCCATCATTATTTTCTTAGAACTGAAATTAAAAACTATCTTGTGGTAAACCTTCTTATTGATTAGTGATTACCTTCCTGTTAATGTCATCAACTTCATTGCCAATGTTTTGTTGACATATAATCTTGCTTTCTAACCGTTTCGTTTACTATGTCCTGAATTGTCTATCAAAATCTCCCTTGATAAGCATGTATGTTTGTACTGTTACTGAGTTATACTTCAATGATGTGTGGCATATGTTAAATTTAAAAAGTCCTTGCCGTAAATTTCGATGTTTGTTTTGAATTAGTTAAATTTGAGTTTGGTGAGATGTATGAAACAGGTTCCTGAGATACTTTCAGATGAAGTGCTTGGTAAAATGAGTGCACCAGCAAAGAGCGATGCTCCAATCATTACTCCAAATGAGCTAGCTGAAGCTGATGGCTTTATATTTGGGTTCCCCACAAGATTCGGAATGATGGCTGCTCAATTTAAGGCTTTCCTCGATTCAACTGGGGGTCTATGGAGAACTCAGCAGCTTGCTGGAAAACCTGCTGGCTTATTCTTTAGCACAGGATCTCAAGGTGGTGGACAAGAAACCACTGCGTAAGCTCCCTACTGCCAGTGCCTCATTATATTGTTTCTTTTTCCCTTCATCTCCAGAACATAATACTAAATTCAAAGAGAAACTTTGTTCTTTTTTTACAGTTTGACTGCCATCACTCAGTTGACTCACCACGGTATGATCTTTGTCCCAATTGGCTACACATTTGGTGCCGGTATGTTTGAGATGGAGAACGTCAAGGGTGGAAGCCCCTATGGTGCTGGAACTTTTGCCGGAGATGGTTCAAGAGTGCCAACAGAGCTTGAATTGCAGCAGGCTTTCCACCAGGGGAAGTATGTTGCTACAATCACAAAGAAGCTCAAAGGAAGTGCTTAACTGATTTCTAGATTCATAAACATACACCGGATCATACGTTACTCATTACAAATCATACACTATTTGTTTTCTTTTCTATTTTTGTGCCTTTTCTGTCTTCTTTAATAAATGCTCCATATATGTTTTCTTTCTATTTTTGAATGATAAAGCTTGTGCTATTTTTTCTACATTGCGAGTTTGCTACTATTTGTAAGTAACGTTTATTACCTATTTGCTTGTTTAGACCGACTGATCAGAGATTTCTCCATTTTTCCGTTCATTTGTCAGAGTCTTCTTTGATAGGACCCTAGTAGTATATCAACTATTCATAAGGATCGTCTATAAGACAATCAACCAAACAATACAACTCCAATACACCACAAATAATCCACCAAACAAATAACCTATAAATCAACCAATAATGGACAGCAAGAAACAATCAAATGCGGAAGAACAAAATCAATCAACACACACGACTTATACGTGGAAAGCC AGCTTGGGAGAGAAGTGACGGTGAATGACATGATGATGAGGACAAGCGTGACACTGTGATAGCATCATTCCCATGTCCAAGGACTCCAAATCAATTTTAGCCAGCTACTCCGGCTTAACAACCTTAGACGCCATCCTTTACGTATTAGACTCTAATTACAGTAACTAATCCGTAATTACCAGTTTAATTAACCCCAACTAATTCAATGTACCATACTTACTATAAATAACCACCCACTTCTCCATTTCCTTTTCGTCAACGCACATCAATTTCATTCCATCACTTCGCATAATTGCTGCAAAAGAAGGCCGGGATTAAGAGAGAGAAACAAAGGAGCGAGTTTTAGGGAGAGAAAAACAGCGAGTCAACTACTGTCCATTTCAAACTTCGATCTCCAATGGCAACCAAAGTTTACATTGTGTACTATTCTATGTACGGACACGTACACAAGCTGGCAGAGGAGATCCAGAAAGGAGCTGCATCTGTTGAAGGTGTAGAGGCTAAACTCTGGCAGGTTCCTGAGATACTTTCAGATGAAGTGCTTGGTAAAATGAGTGCACCAGCAAAGAGCGATGCTCCAATCATTACTCCAAATGAGCTAGCTGAAGCTGATGGCTTTATATTTGGGTTCCCCACAAGATTCGGAATGATGGCTGCTCAATTTAAGGCTTTCCTCGATTCAACTGGGGGTCTATGGAGAACTCAGCAGCTTGCTGGAAAACCTGCTGGCTTATTCTTTAGCACAGGATCTCAAGGTGGTGGACAAGAAACCACTGCTTTGACTGCCATCACTCAGTTGACTCACCACGGTATGATCTTTGTCCCAATTGGCTACACATTTGGTGCCGGTATGTTTGAGATGGAGAACGTCAAGGGTGGAAGCCCCTATGGTGCTGGAACTTTTGCCGGAGATGGTTCAAGAGTGCCAACAGAGCTTGAATTGCAGCAGGCTTTCCACCAGGGGAAGTATGTTGCTACAATCACAAAGAAGCTCAAAGGAAGTGCTTAACTGATTTCTAGATTCATAAACATACACCGGATCATACGTTACTCATTACAAATCATACACTATTTGTTTTCTTTTCTATTTTTGTGCCTTTTCTGTCTTCTTTAATAAATGCTCCATATATGTTTTCTTTCTATTTTTGAATGATAAAGCTTGTGCTATTTTTTCTACATTGCGAGTTTGCTACTATTTGTAAGTAACGTTTATTACCTATTTGCTTGTTTAGACCGACTGATCAGAGATTTCTCCATTTTTCCGTTCATTTGTCAGAGTCTTCTTTGATAGGACCCTAGTAGTATATCAACTATTCATAAGGATCGTCTATAAGACAATCAACCAAACAATACAACTCCAATACACCACAAATAATCCACCAAACAAATAACCTATAAATCAACCAATAATGGACAGCAAGAAACAATCAAATGCGGAAGAACAAAATCAATCAACACACACGACTTATACGTGGAAAGCC ATGGCAACCAAAGTTTACATTGTGTACTATTCTATGTACGGACACGTACACAAGCTGGCAGAGGAGATCCAGAAAGGAGCTGCATCTGTTGAAGGTGTAGAGGCTAAACTCTGGCAGGTTCCTGAGATACTTTCAGATGAAGTGCTTGGTAAAATGAGTGCACCAGCAAAGAGCGATGCTCCAATCATTACTCCAAATGAGCTAGCTGAAGCTGATGGCTTTATATTTGGGTTCCCCACAAGATTCGGAATGATGGCTGCTCAATTTAAGGCTTTCCTCGATTCAACTGGGGGTCTATGGAGAACTCAGCAGCTTGCTGGAAAACCTGCTGGCTTATTCTTTAGCACAGGATCTCAAGGTGGTGGACAAGAAACCACTGCTTTGACTGCCATCACTCAGTTGACTCACCACGGTATGATCTTTGTCCCAATTGGCTACACATTTGGTGCCGGTATGTTTGAGATGGAGAACGTCAAGGGTGGAAGCCCCTATGGTGCTGGAACTTTTGCCGGAGATGGTTCAAGAGTGCCAACAGAGCTTGAATTGCAGCAGGCTTTCCACCAGGGGAAGTATGTTGCTACAATCACAAAGAAGCTCAAAGGAAGTGCTTAA MATKVYIVYYSMYGHVHKLAEEIQKGAASVEGVEAKLWQVPEILSDEVLGKMSAPAKSDAPIITPNELAEADGFIFGFPTRFGMMAAQFKAFLDSTGGLWRTQQLAGKPAGLFFSTGSQGGGQETTALTAITQLTHHGMIFVPIGYTFGAGMFEMENVKGGSPYGAGTFAGDGSRVPTELELQQAFHQGKYVATITKKLKGSA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo19172.1 vs. NCBI nr
Match: gi|731365038|ref|XP_010694306.1| (PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 395.2 bits (1014), Expect = 6.900e-107 Identity = 195/203 (96.06%), Postives = 200/203 (98.52%), Query Frame = 1
BLAST of Spo19172.1 vs. NCBI nr
Match: gi|902229867|gb|KNA21634.1| (hypothetical protein SOVF_041140 [Spinacia oleracea]) HSP 1 Score: 386.0 bits (990), Expect = 4.200e-104 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Spo19172.1 vs. NCBI nr
Match: gi|470116285|ref|XP_004294313.1| (PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 379.8 bits (974), Expect = 3.000e-102 Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 1
BLAST of Spo19172.1 vs. NCBI nr
Match: gi|698534971|ref|XP_009764033.1| (PREDICTED: P25 protein-like [Nicotiana sylvestris]) HSP 1 Score: 376.7 bits (966), Expect = 2.500e-101 Identity = 182/203 (89.66%), Postives = 195/203 (96.06%), Query Frame = 1
BLAST of Spo19172.1 vs. NCBI nr
Match: gi|923542479|ref|XP_013733617.1| (PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1 [Brassica napus]) HSP 1 Score: 375.9 bits (964), Expect = 4.300e-101 Identity = 183/202 (90.59%), Postives = 193/202 (95.54%), Query Frame = 1
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRW5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041140 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 2.900e-104 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Match: A0A078I1U9_BRANA (BnaA03g11850D protein OS=Brassica napus GN=BnaA03g11850D PE=3 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 3.000e-101 Identity = 183/202 (90.59%), Postives = 193/202 (95.54%), Query Frame = 1
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Match: M1B359_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013879 PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 5.100e-101 Identity = 182/203 (89.66%), Postives = 194/203 (95.57%), Query Frame = 1
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Match: M4EJQ9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 6.700e-101 Identity = 182/202 (90.10%), Postives = 193/202 (95.54%), Query Frame = 1
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L325_CUCSA (Minor allergen Alt a OS=Cucumis sativus GN=Csa_3G081930 PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 6.700e-101 Identity = 183/203 (90.15%), Postives = 195/203 (96.06%), Query Frame = 1
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Match: FQRL1_ARATH (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana GN=At4g27270 PE=2 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 1.500e-101 Identity = 182/203 (89.66%), Postives = 192/203 (94.58%), Query Frame = 1
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Match: FQR1_ARATH (NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana GN=FQR1 PE=1 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 1.500e-101 Identity = 180/202 (89.11%), Postives = 192/202 (95.05%), Query Frame = 1
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Match: FQRL2_ARATH (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 OS=Arabidopsis thaliana GN=At4g36750 PE=1 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.400e-72 Identity = 134/197 (68.02%), Postives = 158/197 (80.20%), Query Frame = 1
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Match: FQRL3_ARATH (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 OS=Arabidopsis thaliana GN=At5g58800 PE=2 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.300e-70 Identity = 129/199 (64.82%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Match: NQOR_ALKEH (NAD(P)H dehydrogenase (quinone) OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) GN=Mlg_1277 PE=3 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.900e-48 Identity = 101/199 (50.75%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of Spo19172.1 vs. TAIR (Arabidopsis)
Match: AT4G27270.1 (Quinone reductase family protein) HSP 1 Score: 370.2 bits (949), Expect = 8.400e-103 Identity = 182/203 (89.66%), Postives = 192/203 (94.58%), Query Frame = 1
BLAST of Spo19172.1 vs. TAIR (Arabidopsis)
Match: AT5G54500.2 (flavodoxin-like quinone reductase 1) HSP 1 Score: 292.7 bits (748), Expect = 1.700e-79 Identity = 142/162 (87.65%), Postives = 152/162 (93.83%), Query Frame = 1
BLAST of Spo19172.1 vs. TAIR (Arabidopsis)
Match: AT4G36750.1 (Quinone reductase family protein) HSP 1 Score: 273.9 bits (699), Expect = 8.200e-74 Identity = 134/197 (68.02%), Postives = 158/197 (80.20%), Query Frame = 1
BLAST of Spo19172.1 vs. TAIR (Arabidopsis)
Match: AT5G58800.1 (Quinone reductase family protein) HSP 1 Score: 266.5 bits (680), Expect = 1.300e-71 Identity = 129/199 (64.82%), Postives = 155/199 (77.89%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19172.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19172.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19172.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19172.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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