Spo19220.1 (mRNA)

Overview
NameSpo19220.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein
LocationSpoScf_01361 : 126983 .. 133966 (+)
Sequence length2645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATAAATACATAAAAAGATTTCCCTAACGAACATTAATCCTCTCAATTGATTAGTCAGTTGTTCTGTCTCCTTTTTCCCTCCAAACTAAAACCCTTTCCCCCAAAAATAAACTCAAAAACCCTCACACCCTTTTTTTCTTCATCCTCCTCTTTTCCCTATCCAAAGCTTCTCACCCCTCTCTCTCTCTCCTCACCTTCAAACTCCATAGCTATGGCTAAGCTCTAAGCTTACTTTCTCTCTCCTCCTCCTTCCCCTCCCCAAGAAAAATTTGGGAATGTTGTATAATATAGCAAAAATGAAATCCCTAATTTCCCCCAAAACTTTCTCTCTCCTCCCTCCACCCCACAAATCACCTTCCTTCCTTCTCTATTTTCGGCCTTCACTTCTTCAAAACCCCCCTAAATTTCTCTCCCCCCTTCAACCCTCTTACCCCAGGTTGCGCACCCTTCGTTGTTACGCTTCTTCTTCTTCTCAGCATATGCAGCAGTATCCTTCGCCACAGCCGCCGTCTTCTTCATGCGGTGAAATTCATGTTATTGTGGGTCCCATGTTCGCCGGGAAAACCTCCTCTCTCCTTCGCCGCATCCAATCCGAGAGCAGTAATGGAAGGTTATTCTTCTCCTAATTACCTTCTTTCATCTTCGTTTATGTATATTTAGCTTTAATTATATGATGGTTTTTAATTGCTATTACTATTATTGTTTATTCTTTGATCAGTTTAATGTTAAAATCTTCAAATGTGAATTAGGGGTTAATTGGTTGCCCTAATTTCCCTCTTAATTAATTTGTTTGATAAAAAATTTGTTGCTTTGTACATTTGAATGATTGTTACTTGTTTATTTGTATGCTAAGGTTATGCTCTTCGGAGTAAGGTTTATGTGATCCATGGTTGTTTGATCGTATGATTATAAGTTTATAACCACTCTCGCCGTCTCAAAATGATTGTCTTGTTATTTCGACTTCTCATAATTAAGGATTGTTGGACTTTCTAGTAGTTATATCATTTTCACACCCTCTTAGTACTTTATTGGCTTTTGAGCTGAAATTCCTAGGAATTTTTTGAGAACTTTGAATTTTTAGAAGCTTACTGAGCTTGTAATGGGTGGATAGGGTTTTGAATTAGGATTGTATAAAAGTACCATTTTTAGAAGAAAAAAAATGTAATTCCTTTTGGGTTGGGCGATAAGAGAAATAGTGACATGTGCATCTCGGGACAGCCTACTCAGAATGCAGCAGTGATGTTTTAGCTTGGTTACCTTCATCCTTAGACGTCCAGGGGACACATATATTGTACTTTTGGCTGCTGGATATTGTTGTCACTGTCAGTATGTCCCAGTTTTCAGGCTGCAAAAATCAAGAGCTCGTCGCTACTGTTGGATAAAACATTGAAGGATCTTTGCTACTCTGGAAGACTGAGGGAAGCAATTAGGTTACTCTGCCGTACTGAAGTAGCTGTGGACTGGCATACTTATGCTCTCTTACTGCAAGATTGTATACATGGAGGAGCACATGAGTGGGGTAAAAGTATTCATGCTCATATGGTGGTTGTTGGTTTTACTCTGAATGAATACCTGAAAACCAAACTGTTGATTTTGTACTGTAAGGCAGGGAAGTTGGGGACTGCCTGCATACTCTTTAATGAGTTGCTAGAGAAGAGCTTAATTTCGTGGAATGCAATGATTGCAGGGTATGTGCAGAGAAGCATGGAAGATGTAGGATTGAGTCTGTATCACAAGATGAGACATATTGGTGTGACTCCAGATCAATTCACCTTTGCATCTGTGTTCAGAGCATGTGCCTCTTTGGCGTTGCTGGAGCAGGGAAGGCAGGCCCATGGTATACTGGTTAAATGTGGAATTGGGAAAAATGTTATCGTTAATAGTGCTCTCATGGATATGTATTTCAAATGCAGCTGTTTAACAGATGGACATCAGGTGTTCATTAAATCTCCCGATAAGAATGTAATCACTTGGACTGCCCTCATATCTGGATATGGACACAATGGAAGGACTGATGAGGTTTTGGAACTCTTTGACGAAATGATAAAAGAAGGTCTGAGACCCAATTACGTCACCTTCCTTGCTGTTCTTTCTGCTTGTAGCCATAGAGGTCTTGTTGATGAAGGTTGGAAGTATTTCTCATTAATGAAGAATGACTATGGCATCCAACCTCATAGGAAACACTTTGCAGCCATAGTCGATCTTTTAGGACGTGCTGGGAGGTTAGATGAGGCTTATAACTTTATTAATAGCTCACCATGTAAGGACAATTCTGTGGTCTGGGGTTCTTTGCTTGGAGCTTGTCGACTTCATGGTAATGTTAAGTTGCTGGAATTATCAGCAAAGAAGTACTTTGACTTGGAGCCAAAAAATGCTGGAAAATATGTTGTTTTGTCCCATACTTTTGCCTCCCATGCAATGTGGGAAAGTGTGGCTGAGGTTTGGGGTCTGATGAGGGACTCTGGGGTGAAAAAAGATCCTGGATATAGTAGGATTGAGCTCCAGAATGAAGTCCATTTCTTTTTTAAGGGTGACGACACGCACAAAGATGCTAAAGATACATATGAAATGCTTAAAGTTTTGACTTGTGCAATAGTGGACAGTGGTTATATTCCTGATTTAGTTTCTGAGTAGTCATTAATACAAGTTACAACTATCATGATGTTCAAGTCCCATAATCGGTGATAACCATAAAAGGTTGATTTGCAGAATGTATGTGAACAATTTAAGACAGGTAAGATATTTAGCTGCTCTCTCTCTTGTCTTGCTCATATTTTTCATTTCAGCCATCTAACCAGTACCCAACTATAGATTGTCTGGATATGATATGCTACTTCGGGTGTTGGACACTCCAAATCAAGATAAAACATAGAGAAATAACTCGAAGTAGCCAAGTGCAACCCTTCGTTCCACACTTCCACATCCATACATATTTACGGTTTAGTAACATAATTCCTGTCAATTGAAAGACAGGGATGTGCATTGAATTTTTTCATTGTCTTTGTTTTTCCTTGAAGTATGTAACGATTACCATACTTCTTTTATTCGTTCAATTCTTCGTTGCATGATAGATATAATTATTAGAATATTAGTACTCTGTAATGTTTACTATGTATACATGTGGCTGTTTAAGTGATTGATGATTTGACTTCCGAGTATGTATTATGCTCTAGAAGTCTAGAACAAATCATTTTGATGCAAGGCAAACAACTCTTTTATATCTCTATAGTCTTAAGCATGGTTTATAGGAAACTAAGCTCAACTATTATCTCGGTGAAGAGTGTTAGGAGAATGAGACTTTGGAACCCCCTCTACCATTCTTCGTCCCCCGCCTTCCCTCCATAAAAAAGGAAAAAGATGAAGGGTAGTAAAGTCAAAACTTTTTTAGAGCATTAAAGCTTTATATTTTGTAATCGGTATTTCATTCATTTTCATATATGTTCTCTGTTGCTTCCACATAGAGGGAGAAAAAGGATCAATATGTGAATCAAATTTCATTGAGTTTGAGACAATTTGTTCTGTTCAGAACTTTCTTGCCTTGCCTTTGTTATGCTTTGACATTCAGGATAAATATGCATCATGATCAGAACACTAAACTGCTCCTTTTCTGTGTTATCTGTGAAACAGAAAAGTGGCTGTGATCAAATCAAGCAAAGACACAAGATATGAACTGAACTCCATTGTCACTCATGATGGAGATAAACTTCCATGCTTGGCATTGCATGACTTGTCATCATTCAGACAAAAATTTGGCTCAATCGCTTATGACGAGGTATCGCAATAGAAAAAGCTACTTTGTGTATTTGGGTTTATTATGGGAAATCTCCACATAAACAGCCAAATTTTCTGCAAAATCTTTCTGATTTTTGTTTCACGGCCGGTGATTTATTGTGATGGTAGTATGGTACATTTCTGCTGCATATGCTAGCCATACAATTTAGTTTCCTTGTAGATAACACAGCACCTAATGAGTGAGTATCTGCAGCTAGATGTGATTGGTATTGATGAAGCTCAATTTTTCGAGGATCTATACGACTTCTGTGAAAGGGCTGCCGACCATGATGGCAAAACCATTATAGTTGCTGGTCTAGATGGTGATTACTTGAGGTACAAAGTACTATTCATATCCTCGTTGAGCAGCTATAGGCTGTATAACTTAATGTTCTGTGTGAGGTTTTTCCTGTAACTCTACAGTCTACAGCCCTGTTGCCTTTTCTTTGTCATGTGCCCCATAATGTTGGGTGCTTTAAGATTAAAAATTTACTGCTTTAGATCTACTCTCTAGAAATAATTTTGTACACATTGTACTTGGTGTATTTGAAAAAAGTCCACATTATCTTGACAACTTTCTAGCGGGCTAATGTCAAGTTTTGTCACAGGAGGAGCTTTGGTTCCGTGCTTAGTATAATTCCAGTAGCAGACTCAGTGACGAAGCTAACTGCTCGATGTGAGTTGTGCGGCAAACCTGCCTGTTTCACGTTGAGGAAAACTGATGAAAGACAGACTGAATTGATTGGTGGAGCTGAAGTCTACATGCCTGTGTGCAGGCAGCACTATGTTAGTGGGCAGGTAGTCATTGAAACAGCAAGAACGGTCCTGCAACAAAAAGTTGAGTGTGGACAGCGAGCTTCTTAGGTTTGTGATATTATTTTGCATCTCTGGAAAGGTTTTCACATCTAGATCTTAGAGTTATTAGATGGAGAAATGCAGATTTTGTTAGCTATAAAATTAGAGCAATTTAGCTGGATAATACGTATGCACGAACCATTGCTCTAAAAGACAATTCCACACTACCTCGGATGTAGTAGAACATTTGCGGTTGCCCTCCAGGGTGCCCTCACAACCCTCAGTTGGAGACCAGAATACTTGCCTAGAGGAACAAAATAGTGTTTTAGAATTTGAGAGAGAATGCTGAGAACTGTTTCAGTAAATGTATGTTCATGGAAAAACGGAGGAAAACTATTTATAGGAAAATTGTAACAAACATAAAATGGCTAGTAATGACCGTTAGAAATAATAAAATAGCTTTCTACCAAAAAGAATAACCCACCCCACGCCGTCGAACTGCATTAGCTAAGTACCAAGGCCCACGGCCTGGTTCGCGTGTGAGTGTGTTGGGTGTCCACCCATGCCACTCTCATGCTTTCTTAAACAAATGTTTCCCTCAAGTTCCCAAATATAAACAATGAATGTAGTTTGTTTTTCCATGTGAGACTTTTCATACTCCCAAATTTTCTCATTTCCAACTCATTTTCTTTTGTATTCTCACTAGGGTAATGAAGGAATTAATGCCCTTGGTCAAAGTATGCATTCAATGCTAAGTCTAATAAATGCGGTTCAGTAGTGGTTCAGTATTAATTAATTAAACAAGTTAATAATTCAATGAGATCAAGTAGCTGTATGCCTAATTAGATGCCGCTTCAGTTCAAATGAAATTAATAATATTAATCAACAGCTTACTTATGACAACCTGTAGGGTCACACAAATAGTACGTGAACGGATCAAATATTTAAGTGAATTAAATACTCTAAATGTGAACATTTGGAAACGACGGATATCGGTTCCAGTGGGAGCTGAAATTGTCAAAAGCCAAAATATAGAACGCTCCAGAAATGATGATATTGCCGGAAACGAAAATATGGATCATGACGGAAATATAAATATTACCCAAGTCGTAGATGATGTCGGAAACGGAAACATGGTACGTACCGGAAAATATTATCGGAAATCGAAATATTACCGGAATCGGAAATATTGCCGGAAACGGAAATATTACCGGAATCGAAAATATTGTCGGAATCGAAAATCAATTCCGAAATCGGAAATATTAAATATTTGTTCGAATCGGAAATAAATTTCGGAATCGGAAATATAAAATATTTGTTCGAATCGGAAAACAAATCGGAAGCGCGTCGTGCGAATGATCGACGAACGAGCTTGCGAGACGCAAGGCCCAACGCCAGGCCCATCGCCCAGCAAGCCCGCGCGCCAAAGCAACGAGCAAAGCAGGCCGAGCAAAGAGGCCGAGCAGCAGCAGCGCCCAAGTGGGCCACGTGCATGCTGCCAACGCCCTTGGGCCAGCGAGCAAGCAGCAGCGCCACTCGTGGGCCTGCGTGCTGCGGGCTGCGCGTCGCTGCGGGCTGTGCTTGCTACACGGCCATTACCTTGGTCGGTTAGGATTACTTCGTTGTCAAGTAATCGCGTTTTCCTAATTCTATTCAAATTGGATATTTTAGTTAAATCTGAAATACTTAGGTATTTGATTAAACATAAAATTCTAATGATATTATTTAACTAGAATCCTAATGGATTTAGTTATTCGAATCCTAGTAGAATTCTAACTCCGTTATTTCCACCCTATAAATATGTGGTTCATGATCACAATTTATAATACATTTTAATAAGTATTCACATACATTAAGTTCAAGACAGAATTTAATATTTGCCTAATATTATATTAAGTTTTCCGAGTGCACATAAAACCTTAGATAATATTATAGTTAATTGACTCTGAGGCGGAACCGAACATTCTGTGGATTATCTACGGAGGGGCGACATTTGGAGTCTTAAACTTGTTCTTGTTTGGTTCGGGAGCAGCTAGGAAAGGCACGCATCACATCGTATATATAATAATTATGCTAATTGACTATGTGGCAATTAATTTGGATTCTTGACTTTATGGTTTTTCCGCATGAAATATATGTTTTATATTTGTCATAATTTAACAGTGGTGTCACGAGCCTCTAATTAATTCCATAATCCAGGAAAGCAAAAGTCAGACTTTTGGGTAGCAAGGGTAAAAAGTTGGTCTGCTAAGCTGCTTAGTTATGCTGGAAGGTGGCAACTGATTAGATCAGTTTTATTTGGCATCCAGTTGTACTGGTGTCAGATATTCATTATGCCTAAGAAGGTGTTGAAAGAAATACAAAGAATCTGTAGATGTTTTCTATGGACTGGAGCTGAAGGGAATTCCAGGAAAGCG

mRNA sequence

TCATAAATACATAAAAAGATTTCCCTAACGAACATTAATCCTCTCAATTGATTAGTCAGTTGTTCTGTCTCCTTTTTCCCTCCAAACTAAAACCCTTTCCCCCAAAAATAAACTCAAAAACCCTCACACCCTTTTTTTCTTCATCCTCCTCTTTTCCCTATCCAAAGCTTCTCACCCCTCTCTCTCTCTCCTCACCTTCAAACTCCATAGCTATGGCTAAGCTCTAAGCTTACTTTCTCTCTCCTCCTCCTTCCCCTCCCCAAGAAAAATTTGGGAATGTTGTATAATATAGCAAAAATGAAATCCCTAATTTCCCCCAAAACTTTCTCTCTCCTCCCTCCACCCCACAAATCACCTTCCTTCCTTCTCTATTTTCGGCCTTCACTTCTTCAAAACCCCCCTAAATTTCTCTCCCCCCTTCAACCCTCTTACCCCAGGTTGCGCACCCTTCGTTGTTACGCTTCTTCTTCTTCTCAGCATATGCAGCAGTATCCTTCGCCACAGCCGCCGTCTTCTTCATGCGGTGAAATTCATGTTATTGTGGGTCCCATGTTCGCCGGGAAAACCTCCTCTCTCCTTCGCCGCATCCAATCCGAGAGCAGTAATGGAAGTTTTCAGGCTGCAAAAATCAAGAGCTCGTCGCTACTGTTGGATAAAACATTGAAGGATCTTTGCTACTCTGGAAGACTGAGGGAAGCAATTAGGTTACTCTGCCGTACTGAAGTAGCTGTGGACTGGCATACTTATGCTCTCTTACTGCAAGATTGTATACATGGAGGAGCACATGAGTGGGGTAAAAGTATTCATGCTCATATGGTGGTTGTTGGTTTTACTCTGAATGAATACCTGAAAACCAAACTGTTGATTTTGTACTGTAAGGCAGGGAAGTTGGGGACTGCCTGCATACTCTTTAATGAGTTGCTAGAGAAGAGCTTAATTTCGTGGAATGCAATGATTGCAGGGTATGTGCAGAGAAGCATGGAAGATGTAGGATTGAGTCTGTATCACAAGATGAGACATATTGGTGTGACTCCAGATCAATTCACCTTTGCATCTGTGTTCAGAGCATGTGCCTCTTTGGCGTTGCTGGAGCAGGGAAGGCAGGCCCATGGTATACTGGTTAAATGTGGAATTGGGAAAAATGTTATCGTTAATAGTGCTCTCATGGATATGTATTTCAAATGCAGCTGTTTAACAGATGGACATCAGGTGTTCATTAAATCTCCCGATAAGAATGTAATCACTTGGACTGCCCTCATATCTGGATATGGACACAATGGAAGGACTGATGAGGTTTTGGAACTCTTTGACGAAATGATAAAAGAAGGTCTGAGACCCAATTACGTCACCTTCCTTGCTGTTCTTTCTGCTTGTAGCCATAGAGGTCTTGTTGATGAAGGTTGGAAGTATTTCTCATTAATGAAGAATGACTATGGCATCCAACCTCATAGGAAACACTTTGCAGCCATAGTCGATCTTTTAGGACGTGCTGGGAGGTTAGATGAGGCTTATAACTTTATTAATAGCTCACCATGTAAGGACAATTCTGTGGTCTGGGGTTCTTTGCTTGGAGCTTGTCGACTTCATGGTAATGTTAAGTTGCTGGAATTATCAGCAAAGAAGTACTTTGACTTGGAGCCAAAAAATGCTGGAAAATATGTTGTTTTGTCCCATACTTTTGCCTCCCATGCAATGTGGGAAAGTGTGGCTGAGGTTTGGGGTCTGATGAGGGACTCTGGGGTGAAAAAAGATCCTGGATATAGTAGGATTGAGCTCCAGAATGAAGTCCATTTCTTTTTTAAGGGTGACGACACGCACAAAGATGCTAAAGATACATATGAAATGCTTAAAGTTTTGACTTGTGCAATAGTGGACAGTGGTTATATTCCTGATTTAGTTTCTGAAAAAGTGGCTGTGATCAAATCAAGCAAAGACACAAGATATGAACTGAACTCCATTGTCACTCATGATGGAGATAAACTTCCATGCTTGGCATTGCATGACTTGTCATCATTCAGACAAAAATTTGGCTCAATCGCTTATGACGAGCTAGATGTGATTGGTATTGATGAAGCTCAATTTTTCGAGGATCTATACGACTTCTGTGAAAGGGCTGCCGACCATGATGGCAAAACCATTATAGTTGCTGGTCTAGATGGTGATTACTTGAGGAGGAGCTTTGGTTCCGTGCTTAGTATAATTCCAGTAGCAGACTCAGTGACGAAGCTAACTGCTCGATGTGAGTTGTGCGGCAAACCTGCCTGTTTCACGTTGAGGAAAACTGATGAAAGACAGACTGAATTGATTGGTGGAGCTGAAGTCTACATGCCTGTGTGCAGGCAGCACTATGTTAGTGGGCAGGTAGTCATTGAAACAGCAAGAACGGTCCTGCAACAAAAAGTTGAGTGTGGACAGCGAGCTTCTTAGGAAAGCAAAAGTCAGACTTTTGGGTAGCAAGGGTAAAAAGTTGGTCTGCTAAGCTGCTTAGTTATGCTGGAAGGTGGCAACTGATTAGATCAGTTTTATTTGGCATCCAGTTGTACTGGTGTCAGATATTCATTATGCCTAAGAAGGTGTTGAAAGAAATACAAAGAATCTGTAGATGTTTTCTATGGACTGGAGCTGAAGGGAATTCCAGGAAAGCG

Coding sequence (CDS)

ATGTTGTATAATATAGCAAAAATGAAATCCCTAATTTCCCCCAAAACTTTCTCTCTCCTCCCTCCACCCCACAAATCACCTTCCTTCCTTCTCTATTTTCGGCCTTCACTTCTTCAAAACCCCCCTAAATTTCTCTCCCCCCTTCAACCCTCTTACCCCAGGTTGCGCACCCTTCGTTGTTACGCTTCTTCTTCTTCTCAGCATATGCAGCAGTATCCTTCGCCACAGCCGCCGTCTTCTTCATGCGGTGAAATTCATGTTATTGTGGGTCCCATGTTCGCCGGGAAAACCTCCTCTCTCCTTCGCCGCATCCAATCCGAGAGCAGTAATGGAAGTTTTCAGGCTGCAAAAATCAAGAGCTCGTCGCTACTGTTGGATAAAACATTGAAGGATCTTTGCTACTCTGGAAGACTGAGGGAAGCAATTAGGTTACTCTGCCGTACTGAAGTAGCTGTGGACTGGCATACTTATGCTCTCTTACTGCAAGATTGTATACATGGAGGAGCACATGAGTGGGGTAAAAGTATTCATGCTCATATGGTGGTTGTTGGTTTTACTCTGAATGAATACCTGAAAACCAAACTGTTGATTTTGTACTGTAAGGCAGGGAAGTTGGGGACTGCCTGCATACTCTTTAATGAGTTGCTAGAGAAGAGCTTAATTTCGTGGAATGCAATGATTGCAGGGTATGTGCAGAGAAGCATGGAAGATGTAGGATTGAGTCTGTATCACAAGATGAGACATATTGGTGTGACTCCAGATCAATTCACCTTTGCATCTGTGTTCAGAGCATGTGCCTCTTTGGCGTTGCTGGAGCAGGGAAGGCAGGCCCATGGTATACTGGTTAAATGTGGAATTGGGAAAAATGTTATCGTTAATAGTGCTCTCATGGATATGTATTTCAAATGCAGCTGTTTAACAGATGGACATCAGGTGTTCATTAAATCTCCCGATAAGAATGTAATCACTTGGACTGCCCTCATATCTGGATATGGACACAATGGAAGGACTGATGAGGTTTTGGAACTCTTTGACGAAATGATAAAAGAAGGTCTGAGACCCAATTACGTCACCTTCCTTGCTGTTCTTTCTGCTTGTAGCCATAGAGGTCTTGTTGATGAAGGTTGGAAGTATTTCTCATTAATGAAGAATGACTATGGCATCCAACCTCATAGGAAACACTTTGCAGCCATAGTCGATCTTTTAGGACGTGCTGGGAGGTTAGATGAGGCTTATAACTTTATTAATAGCTCACCATGTAAGGACAATTCTGTGGTCTGGGGTTCTTTGCTTGGAGCTTGTCGACTTCATGGTAATGTTAAGTTGCTGGAATTATCAGCAAAGAAGTACTTTGACTTGGAGCCAAAAAATGCTGGAAAATATGTTGTTTTGTCCCATACTTTTGCCTCCCATGCAATGTGGGAAAGTGTGGCTGAGGTTTGGGGTCTGATGAGGGACTCTGGGGTGAAAAAAGATCCTGGATATAGTAGGATTGAGCTCCAGAATGAAGTCCATTTCTTTTTTAAGGGTGACGACACGCACAAAGATGCTAAAGATACATATGAAATGCTTAAAGTTTTGACTTGTGCAATAGTGGACAGTGGTTATATTCCTGATTTAGTTTCTGAAAAAGTGGCTGTGATCAAATCAAGCAAAGACACAAGATATGAACTGAACTCCATTGTCACTCATGATGGAGATAAACTTCCATGCTTGGCATTGCATGACTTGTCATCATTCAGACAAAAATTTGGCTCAATCGCTTATGACGAGCTAGATGTGATTGGTATTGATGAAGCTCAATTTTTCGAGGATCTATACGACTTCTGTGAAAGGGCTGCCGACCATGATGGCAAAACCATTATAGTTGCTGGTCTAGATGGTGATTACTTGAGGAGGAGCTTTGGTTCCGTGCTTAGTATAATTCCAGTAGCAGACTCAGTGACGAAGCTAACTGCTCGATGTGAGTTGTGCGGCAAACCTGCCTGTTTCACGTTGAGGAAAACTGATGAAAGACAGACTGAATTGATTGGTGGAGCTGAAGTCTACATGCCTGTGTGCAGGCAGCACTATGTTAGTGGGCAGGTAGTCATTGAAACAGCAAGAACGGTCCTGCAACAAAAAGTTGAGTGTGGACAGCGAGCTTCTTAG

Protein sequence

MLYNIAKMKSLISPKTFSLLPPPHKSPSFLLYFRPSLLQNPPKFLSPLQPSYPRLRTLRCYASSSSQHMQQYPSPQPPSSSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDEAQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCGKPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQQKVECGQRAS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo19220Spo19220gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo19220.1Spo19220.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19220.1.exon.1Spo19220.1.exon.1exon
Spo19220.1.exon.2Spo19220.1.exon.2exon
Spo19220.1.exon.3Spo19220.1.exon.3exon
Spo19220.1.exon.4Spo19220.1.exon.4exon
Spo19220.1.exon.5Spo19220.1.exon.5exon
Spo19220.1.exon.6Spo19220.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19220.1.utr5p.1Spo19220.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19220.1.CDS.1Spo19220.1.CDS.1CDS
Spo19220.1.CDS.2Spo19220.1.CDS.2CDS
Spo19220.1.CDS.3Spo19220.1.CDS.3CDS
Spo19220.1.CDS.4Spo19220.1.CDS.4CDS
Spo19220.1.CDS.5Spo19220.1.CDS.5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19220.1.utr3p.1Spo19220.1.utr3p.1three_prime_UTR


Homology
BLAST of Spo19220.1 vs. NCBI nr
Match: gi|296088921|emb|CBI38481.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 895.2 bits (2312), Expect = 7.500e-257
Identity = 439/649 (67.64%), Postives = 535/649 (82.43%), Query Frame = 1

		  

Query: 80  SSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRLR 139
           SS GEIHVIVGPMF+GKT++LLRRIQSE+SNGSFQ    ++S   LD+TLK LC+SGR+ 
Sbjct: 18  SSSGEIHVIVGPMFSGKTTTLLRRIQSETSNGSFQVQPPRNS-FHLDETLKGLCFSGRVM 77

Query: 140 EAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILY 199
           EA+ LLCRT + V+  TYALLLQ+CI     + G+ IHA M+VVG+  +EYLKTKLLIL+
Sbjct: 78  EAVGLLCRTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILH 137

Query: 200 CKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFA 259
            K G L T+ ILF++L +KSLISWNAMIAGYVQ+ +E+ GL+LY +MR  G+TPDQ+TFA
Sbjct: 138 AKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFA 197

Query: 260 SVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDK 319
           SVFRACA+LA LE+G+QAH +++K  I +NV+VNSALMDMYFKCS L DGH+VF KS ++
Sbjct: 198 SVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNR 257

Query: 320 NVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYF 379
           NVITWTALISGYG +GR  EVL  F +M  EG RPNYVTFLAV+SACSH GLV+EGW+YF
Sbjct: 258 NVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYF 317

Query: 380 SLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGN 439
             M  DYGIQP  +H+AA+VDLLGRAGRL EA+ F+ +SPC ++SV+WG+LLGACR+HGN
Sbjct: 318 MSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGN 377

Query: 440 VKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIE 499
           + +L  +AKKYFDLEP+NAGKYVVLS+ +A+  +W++VAEV G+MR+SG++KDPGYSRIE
Sbjct: 378 IDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAEVRGVMRESGMRKDPGYSRIE 437

Query: 500 LQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLV------------SEKVAV 559
           +Q EVHFF  GD +HK  +  YE++K +TC + D+GY+PDL               KVA+
Sbjct: 438 VQREVHFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPDLTRKCITKWMAAPKGRKVAI 497

Query: 560 IKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDEAQFFEDLY 619
           IKS+KDTRY L+SIVTHDG KLPC AL DLSSFR+K GS AYDELDVIGIDEAQFF DLY
Sbjct: 498 IKSNKDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLY 557

Query: 620 DFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCGKPACFTLR 679
           +FC +AADHDGKT+IVAGLDGDYLRRSFGSVL IIP+ADSVTKLTARCE+CGK A FTLR
Sbjct: 558 EFCCKAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLR 617

Query: 680 KTDERQTELIGGAEVYMPVCRQHYVSGQVVIETA-RTVLQ-QKVECGQR 715
           KT E++TELIGGA+VYMPVCRQHYVSGQVVIE A R VL+ QKV+CG++
Sbjct: 618 KTAEKKTELIGGADVYMPVCRQHYVSGQVVIEEATRIVLESQKVQCGEK 665

BLAST of Spo19220.1 vs. NCBI nr
Match: gi|567915151|ref|XP_006449889.1| (hypothetical protein CICLE_v10017607mg [Citrus clementina])

HSP 1 Score: 863.2 bits (2229), Expect = 3.200e-247
Identity = 416/635 (65.51%), Postives = 518/635 (81.57%), Query Frame = 1

		  

Query: 79  SSSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRL 138
           SS  GEIHVIVGPMFAGKT++LLRRIQ+E+  GSFQ   ++++++ LD+ ++ LC+SGRL
Sbjct: 23  SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGSFQV-NLRNNAIQLDEAIRGLCFSGRL 82

Query: 139 REAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLIL 198
            EAI LL RT + VD  TYALLLQ+CI    +  G+ IHA MV+VG+   EY+KTKLLIL
Sbjct: 83  SEAIGLLWRTGLKVDEGTYALLLQECIFTKEYRKGRRIHAQMVIVGYVPIEYIKTKLLIL 142

Query: 199 YCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTF 258
           Y K G L TA +LF++L +KSLISWNAMIAGYVQ+  E+VGL  Y+KMR  G+ PDQ+TF
Sbjct: 143 YAKYGDLVTAHVLFDKLQQKSLISWNAMIAGYVQKGFEEVGLDYYYKMRENGLRPDQYTF 202

Query: 259 ASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPD 318
           AS+FRACA+LA L+ G++AHG+++KCGI +NV+VNSAL+DMYFKCS ++DG QVF K  +
Sbjct: 203 ASIFRACATLATLDYGKRAHGLMLKCGIRENVVVNSALIDMYFKCSIISDGRQVFDKLSN 262

Query: 319 KNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKY 378
           +NV+TWT+LI+GYG +GR  EV +LF  M  EG RPNYVTFLAVLSAC H GLV++GW Y
Sbjct: 263 RNVVTWTSLIAGYGQHGRVVEVFQLFHRMTSEGFRPNYVTFLAVLSACGHGGLVNKGWDY 322

Query: 379 FSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHG 438
           FS M  DYGIQP  KH+AAIVDLLGRAG+L EAY F+ SSPC ++SVVWG+LLGACR+HG
Sbjct: 323 FSSMLRDYGIQPRGKHYAAIVDLLGRAGKLQEAYEFVLSSPCMEHSVVWGALLGACRIHG 382

Query: 439 NVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRI 498
           ++ L++++AKKYF+L+P+NAGKYVVL++ +A+   W++V EV G+MRD GV K+PGYSRI
Sbjct: 383 DIDLVKVAAKKYFELDPENAGKYVVLANAYANVGSWDNVEEVRGMMRDLGVVKEPGYSRI 442

Query: 499 ELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYEL 558
           E+   VHFF  GD +HK +K+  +M+K +TC + D+G          +VIKS+KDTRY L
Sbjct: 443 EVLGMVHFFVMGDKSHKHSKEINQMIKEITCILKDAG----------SVIKSNKDTRYGL 502

Query: 559 NSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDEAQFFEDLYDFCERAADHDG 618
           +SIVTHDG KLPC AL  LSSFRQKFGS AYD++DVIGIDEAQFFEDLYDFC  AADHDG
Sbjct: 503 DSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDG 562

Query: 619 KTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCGKPACFTLRKTDERQTELIG 678
           KT+IVAGLDGDYLRRSFGSV+ IIP+ADSVTKLTARCE CGK A FTLRKT+E +TELIG
Sbjct: 563 KTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIG 622

Query: 679 GAEVYMPVCRQHYVSGQVVIETARTVLQ-QKVECG 713
           G+++YMPVCRQHYVSGQVV+E AR VL+ +KV+CG
Sbjct: 623 GSDIYMPVCRQHYVSGQVVVEAARIVLESEKVQCG 646

BLAST of Spo19220.1 vs. NCBI nr
Match: gi|661878406|emb|CDP17864.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 853.2 bits (2203), Expect = 3.300e-244
Identity = 437/719 (60.78%), Postives = 553/719 (76.91%), Query Frame = 1

		  

Query: 5   IAKMKSLISPKTFSLLPPPHKSPSFLLYFRPSLLQNPPKF-LSPL---QPSYPR------ 64
           I+++K ++    F L   P K+PSFLL    +  +NP  F + PL   QPS+ +      
Sbjct: 4   ISRIKWVLQNPLF-LHQHPIKNPSFLL---KTPTRNPRFFAVKPLLNPQPSHQQHHHHCQ 63

Query: 65  LRTLRCYASSSSQHMQQYPSPQPPSSSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQ 124
           +R L+  A+S++            +SS GEIHVIVGPMFAGKTS+LLRRI++ESSNGSFQ
Sbjct: 64  MRDLKSEATSAAA-----------ASSSGEIHVIVGPMFAGKTSTLLRRIKTESSNGSFQ 123

Query: 125 AAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGK 184
           A   +  +L LDK+LKDLC+SGR+ EA+R+LC   V V+  TY+LLLQDCI    +  GK
Sbjct: 124 A-DAREIALQLDKSLKDLCFSGRVVEAVRMLCHARVQVESETYSLLLQDCIFRKDYSLGK 183

Query: 185 SIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRS 244
            IH  M+++G   NEYL  KLLILY KAG L  A ILF++L  KSL+SWN+MIAGYVQ  
Sbjct: 184 KIHWQMIIIGCVPNEYLNVKLLILYAKAGDLNLAHILFDKLQMKSLVSWNSMIAGYVQIG 243

Query: 245 MEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNS 304
           +E+VGLS++HKMR  G+ PD ++FASVFRACASLA+LEQGRQAH + +KC I  N++VNS
Sbjct: 244 LEEVGLSMFHKMRKNGLIPDHYSFASVFRACASLAILEQGRQAHALWIKCQISGNLVVNS 303

Query: 305 ALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRP 364
           AL+DMYFKCS L++GH VF K  D+N++TW+ALISGYG +GR  EV+E F  M+  G RP
Sbjct: 304 ALVDMYFKCSSLSEGHIVFEKFLDRNIVTWSALISGYGQHGRVVEVIESFHRMLDAGFRP 363

Query: 365 NYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNF 424
           N+VTFL VLSACSH GLV++GW+YF+ M  DYGIQP  KH+AA+VDLLGRAGRL +AY F
Sbjct: 364 NHVTFLVVLSACSHGGLVNKGWEYFTSMTRDYGIQPKGKHYAAMVDLLGRAGRLADAYEF 423

Query: 425 INSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMW 484
           + +SPCKD+ VVWG+LLGAC+ HGN+ L +++AK +F LEP +AGKYVVLS+ +AS  +W
Sbjct: 424 VVNSPCKDHPVVWGALLGACKNHGNMDLAKIAAKNFFKLEPGSAGKYVVLSNAYASFGLW 483

Query: 485 ESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDS 544
           ++VAE+  +M +SG++K+PGYS IE+Q E HFFF   DTH+  ++ +++++ LTC + D 
Sbjct: 484 DNVAEIRSVMNESGMRKEPGYSMIEIQREAHFFFMEHDTHEKTEELHQLIEDLTCVLTDM 543

Query: 545 GYIPDLVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDV 604
           G +  L+S  VAVIKS KDTRY L+ IVTHDG+KLPC  L +LSSFRQK GS AYD+LDV
Sbjct: 544 GML--LIS--VAVIKSDKDTRYALDLIVTHDGEKLPCWPLANLSSFRQKLGSEAYDKLDV 603

Query: 605 IGIDEAQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTAR 664
           IGIDEAQFFEDLYDFC  AAD DGKT+IVAGLDGDYLRRSFGSVL +IP+ADSVTKL AR
Sbjct: 604 IGIDEAQFFEDLYDFCGEAADLDGKTVIVAGLDGDYLRRSFGSVLQVIPLADSVTKLNAR 663

Query: 665 CELCGKPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQ-QKVECG 713
           CELCG+ A FTLRKT+E +TELI GAEVYMPVCR+HYVSGQVV E A+TVL+ Q+V+CG
Sbjct: 664 CELCGRQAFFTLRKTEETETELIAGAEVYMPVCRKHYVSGQVVKEAAKTVLESQRVQCG 702

BLAST of Spo19220.1 vs. NCBI nr
Match: gi|731350738|ref|XP_010686658.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 803.1 bits (2073), Expect = 3.900e-229
Identity = 451/716 (62.99%), Postives = 506/716 (70.67%), Query Frame = 1

		  

Query: 1   MLYNIAKMKSLISPKTFSLLPPPHKSPSFLLYFRPSLLQNPPKFLSPLQPSYPRLRTLRC 60
           ML++IA+MKSLI PKTFSLL PP KSPSFL  FRP  L   P FLSP     P    LRC
Sbjct: 1   MLFSIARMKSLIFPKTFSLLSPPPKSPSFLSSFRPYRLHQNPNFLSP-----PMSTFLRC 60

Query: 61  YASSSS-QHMQQYPSPQPPSSS-CGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKI 120
           +ASSSS Q  QQ+PS    SSS CGEIHVIVGPMFAGKTSSLLRRIQSE+SNG FQAA++
Sbjct: 61  HASSSSSQQKQQHPSSSSSSSSSCGEIHVIVGPMFAGKTSSLLRRIQSETSNGRFQAAQV 120

Query: 121 KSSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHA 180
           KSSSLLLDKTLKDLCYSGRLREAI LL  TEVAVDW TYALLLQ+ I+GGA+EWGK IH 
Sbjct: 121 KSSSLLLDKTLKDLCYSGRLREAIGLLYHTEVAVDWRTYALLLQESIYGGAYEWGKRIHT 180

Query: 181 HMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDV 240
           HMVVVGF LNEYL+TKLLILYCKAGK+GTACILFNEL EKSLISWNAMIAGYVQ+ MEDV
Sbjct: 181 HMVVVGFILNEYLRTKLLILYCKAGKVGTACILFNELSEKSLISWNAMIAGYVQKGMEDV 240

Query: 241 GLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMD 300
           GLSLY+++RHIGV PDQFTF+SVFRA ASLALLEQG+QAHGI+VKCGIGKNV+VNSALMD
Sbjct: 241 GLSLYYELRHIGVAPDQFTFSSVFRAYASLALLEQGKQAHGIMVKCGIGKNVVVNSALMD 300

Query: 301 MYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVT 360
           MYFKCSC++DGHQVF KS +KNVITWTALI GYGHNGR  EVLELF+ M+KEGL+PNYVT
Sbjct: 301 MYFKCSCVSDGHQVFSKSSEKNVITWTALICGYGHNGRIAEVLELFNLMVKEGLKPNYVT 360

Query: 361 FLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSS 420
           FLAVLSACSHRG VDEGWKY+ LMKNDYGI                              
Sbjct: 361 FLAVLSACSHRGRVDEGWKYYYLMKNDYGI-----------------------------Q 420

Query: 421 PCKDNSVVWGSLLG-ACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESV 480
           P + +      LLG A RL    + +  S  K          +  V+  +     +W++V
Sbjct: 421 PHRKHYAAMVDLLGRAGRLEEAYEFINSSPCK----------ENPVVWGSLLGACLWDNV 480

Query: 481 AEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDT-YEMLKVLTCAIVDSGY 540
           AEVWGLMRD GVKK+    ++ L              K  KDT YE+  V+T    D   
Sbjct: 481 AEVWGLMRDFGVKKE----KVAL-------------IKSNKDTRYELNSVVT---HDGDK 540

Query: 541 IPDLVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIG 600
            P         +      R +L S      D+L  + + +   F        YD      
Sbjct: 541 YP------CFALHDLSSFRQKLGSSAY---DELDVIGIDEAQFFED-----LYD------ 600

Query: 601 IDEAQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCE 660
                       FC+RAADHDGKTIIVAGLDGDYLRR+FGSVLSIIP+ADSVTKLTARCE
Sbjct: 601 ------------FCQRAADHDGKTIIVAGLDGDYLRRTFGSVLSIIPLADSVTKLTARCE 620

Query: 661 LCGKPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQQKVECG 713
           LCGK ACFTLRK DE+QTELIGGA+VYMPVCRQHYVSGQVVIE AR VLQ+KVECG
Sbjct: 661 LCGKRACFTLRKIDEKQTELIGGADVYMPVCRQHYVSGQVVIEAARMVLQKKVECG 620

BLAST of Spo19220.1 vs. NCBI nr
Match: gi|976915141|gb|KVI01112.1| (Pentatricopeptide repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 794.7 bits (2051), Expect = 1.400e-226
Identity = 418/707 (59.12%), Postives = 523/707 (73.97%), Query Frame = 1

		  

Query: 8   MKSLISP-KTFSLLPPPHKSPSFLLYFRPSL-LQNPPKFLSPLQPSY-PRLRTLRCYASS 67
           MKSLI P +T S+L P        L F PS  L +   F+    P + P +R+LR  +SS
Sbjct: 2   MKSLIFPSRTASILIPN-------LVFNPSKSLSSVSNFVPIRNPHFIPEVRSLRSPSSS 61

Query: 68  SSQHMQQYPSPQPPSSS-C----GEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIK 127
            S     Y S  P  +  C    GEIHVIVGPMFAGKT++LL R++SESSNG FQA +  
Sbjct: 62  FS-----YSSSSPDENGHCYQTEGEIHVIVGPMFAGKTTTLLHRMKSESSNGRFQA-RDS 121

Query: 128 SSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAH 187
            +   +DKTLK+LC SGRL EA+RLLC T   VD  TY+LLLQDCI    +  G+ IH+ 
Sbjct: 122 DNFRNVDKTLKNLCLSGRLAEAVRLLCHTGQQVDSETYSLLLQDCIFKKYYHHGRRIHSQ 181

Query: 188 MVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVG 247
           MVVVGF  NEYLK KLLILY K+G L TA ILFN LL  ++ISWN MIAGYVQ+ +E++G
Sbjct: 182 MVVVGFLPNEYLKIKLLILYAKSGDLVTAHILFNRLLMPNVISWNTMIAGYVQKGLEEMG 241

Query: 248 LSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDM 307
           LSLY+ MR  G+TPDQFTFASVFRACA+LA+LEQG++ H +L+K  I  NV+VNSAL+DM
Sbjct: 242 LSLYYNMRQSGLTPDQFTFASVFRACATLAMLEQGKRVHAVLIKNQISGNVVVNSALIDM 301

Query: 308 YFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTF 367
           YFKCSC  DGH VF K+ DKNV+TWT+LISGYG +GR  EVL++F  MI EG RPN +TF
Sbjct: 302 YFKCSCPYDGHLVFDKALDKNVVTWTSLISGYGQHGRVKEVLDVFHRMIDEGFRPNNITF 361

Query: 368 LAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSP 427
           LAVLSACSH GLV EGW YF  M+ DYGIQP  KH+AA+VDLLGR+GRLDEAY F+ ++P
Sbjct: 362 LAVLSACSHGGLVGEGWNYFRAMRRDYGIQPREKHYAAMVDLLGRSGRLDEAYEFVRNAP 421

Query: 428 CKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAE 487
            KD+ V+WG+LL AC+++GN+ +++++AK YF+LEP+N GKYVVLS+ +A+   W +VAE
Sbjct: 422 FKDHPVIWGALLQACKVYGNMDMVKIAAKNYFELEPENVGKYVVLSNAYATFGEWSNVAE 481

Query: 488 VWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPD 547
           +  ++++ G+KK+PGYS IE    +         +K      EM  + +  +        
Sbjct: 482 IRSVLKELGMKKEPGYSMIETLAIIS--TSRLLAYKQLFHFGEMRSIFSFQL-------- 541

Query: 548 LVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDE 607
            +++ VA+IKSSKDTRY L+SIVTHDG+KLPC  L  LSSF+++ G  AY +L+VIGIDE
Sbjct: 542 WMNQNVAIIKSSKDTRYGLDSIVTHDGEKLPCWPLEALSSFKERIGIEAYHKLEVIGIDE 601

Query: 608 AQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCG 667
           AQFF+DLYDFC +AADHDGKT+IVAGLDGDYLRRSFG VL IIP+A+SVTKL ARCELCG
Sbjct: 602 AQFFDDLYDFCIKAADHDGKTVIVAGLDGDYLRRSFG-VLDIIPIAESVTKLKARCELCG 661

Query: 668 KPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQ 707
           KPA FTLRKT+E + EL+ GA+VYMPVCR+HYVSGQ V E ARTVL+
Sbjct: 662 KPAFFTLRKTEETERELVAGADVYMPVCRKHYVSGQGVKEAARTVLE 684

BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Match: F6I2E4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0592g00010 PE=3 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 1.800e-249
Identity = 426/637 (66.88%), Postives = 518/637 (81.32%), Query Frame = 1

		  

Query: 80  SSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRLR 139
           SS GEIHVIVGPMF+GKT++LLRRIQSE+SNG                         R+ 
Sbjct: 18  SSSGEIHVIVGPMFSGKTTTLLRRIQSETSNG-------------------------RVM 77

Query: 140 EAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILY 199
           EA+ LLCRT + V+  TYALLLQ+CI     + G+ IHA M+VVG+  +EYLKTKLLIL+
Sbjct: 78  EAVGLLCRTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILH 137

Query: 200 CKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFA 259
            K G L T+ ILF++L +KSLISWNAMIAGYVQ+ +E+ GL+LY +MR  G+TPDQ+TFA
Sbjct: 138 AKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFA 197

Query: 260 SVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDK 319
           SVFRACA+LA LE+G+QAH +++K  I +NV+VNSALMDMYFKCS L DGH+VF KS ++
Sbjct: 198 SVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNR 257

Query: 320 NVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYF 379
           NVITWTALISGYG +GR  EVL  F +M  EG RPNYVTFLAV+SACSH GLV+EGW+YF
Sbjct: 258 NVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYF 317

Query: 380 SLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGN 439
             M  DYGIQP  +H+AA+VDLLGRAGRL EA+ F+ +SPC ++SV+WG+LLGACR+HGN
Sbjct: 318 MSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGN 377

Query: 440 VKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIE 499
           + +L  +AKKYFDLEP+NAGKYVVLS+ +A+  +W++VAEV G+MR+SG++KDPGYSRIE
Sbjct: 378 IDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAEVRGVMRESGMRKDPGYSRIE 437

Query: 500 LQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYELN 559
           +Q EVHFF  GD +HK  +  YE++K +TC + D+GY+PDL   KVA+IKS+KDTRY L+
Sbjct: 438 VQREVHFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPDLKGRKVAIIKSNKDTRYGLD 497

Query: 560 SIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDEAQFFEDLYDFCERAADHDGK 619
           SIVTHDG KLPC AL DLSSFR+K GS AYDELDVIGIDEAQFF DLY+FC +AADHDGK
Sbjct: 498 SIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLYEFCCKAADHDGK 557

Query: 620 TIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCGKPACFTLRKTDERQTELIGG 679
           T+IVAGLDGDYLRRSFGSVL IIP+ADSVTKLTARCE+CGK A FTLRKT E++TELIGG
Sbjct: 558 TVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLRKTAEKKTELIGG 617

Query: 680 AEVYMPVCRQHYVSGQVVIETA-RTVLQ-QKVECGQR 715
           A+VYMPVCRQHYVSGQVVIE A R VL+ QKV+CG++
Sbjct: 618 ADVYMPVCRQHYVSGQVVIEEATRIVLESQKVQCGEK 629

BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Match: V4WA23_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017607mg PE=3 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 2.200e-247
Identity = 416/635 (65.51%), Postives = 518/635 (81.57%), Query Frame = 1

		  

Query: 79  SSSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRL 138
           SS  GEIHVIVGPMFAGKT++LLRRIQ+E+  GSFQ   ++++++ LD+ ++ LC+SGRL
Sbjct: 23  SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGSFQV-NLRNNAIQLDEAIRGLCFSGRL 82

Query: 139 REAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLIL 198
            EAI LL RT + VD  TYALLLQ+CI    +  G+ IHA MV+VG+   EY+KTKLLIL
Sbjct: 83  SEAIGLLWRTGLKVDEGTYALLLQECIFTKEYRKGRRIHAQMVIVGYVPIEYIKTKLLIL 142

Query: 199 YCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTF 258
           Y K G L TA +LF++L +KSLISWNAMIAGYVQ+  E+VGL  Y+KMR  G+ PDQ+TF
Sbjct: 143 YAKYGDLVTAHVLFDKLQQKSLISWNAMIAGYVQKGFEEVGLDYYYKMRENGLRPDQYTF 202

Query: 259 ASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPD 318
           AS+FRACA+LA L+ G++AHG+++KCGI +NV+VNSAL+DMYFKCS ++DG QVF K  +
Sbjct: 203 ASIFRACATLATLDYGKRAHGLMLKCGIRENVVVNSALIDMYFKCSIISDGRQVFDKLSN 262

Query: 319 KNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKY 378
           +NV+TWT+LI+GYG +GR  EV +LF  M  EG RPNYVTFLAVLSAC H GLV++GW Y
Sbjct: 263 RNVVTWTSLIAGYGQHGRVVEVFQLFHRMTSEGFRPNYVTFLAVLSACGHGGLVNKGWDY 322

Query: 379 FSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHG 438
           FS M  DYGIQP  KH+AAIVDLLGRAG+L EAY F+ SSPC ++SVVWG+LLGACR+HG
Sbjct: 323 FSSMLRDYGIQPRGKHYAAIVDLLGRAGKLQEAYEFVLSSPCMEHSVVWGALLGACRIHG 382

Query: 439 NVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRI 498
           ++ L++++AKKYF+L+P+NAGKYVVL++ +A+   W++V EV G+MRD GV K+PGYSRI
Sbjct: 383 DIDLVKVAAKKYFELDPENAGKYVVLANAYANVGSWDNVEEVRGMMRDLGVVKEPGYSRI 442

Query: 499 ELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYEL 558
           E+   VHFF  GD +HK +K+  +M+K +TC + D+G          +VIKS+KDTRY L
Sbjct: 443 EVLGMVHFFVMGDKSHKHSKEINQMIKEITCILKDAG----------SVIKSNKDTRYGL 502

Query: 559 NSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDEAQFFEDLYDFCERAADHDG 618
           +SIVTHDG KLPC AL  LSSFRQKFGS AYD++DVIGIDEAQFFEDLYDFC  AADHDG
Sbjct: 503 DSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDG 562

Query: 619 KTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCGKPACFTLRKTDERQTELIG 678
           KT+IVAGLDGDYLRRSFGSV+ IIP+ADSVTKLTARCE CGK A FTLRKT+E +TELIG
Sbjct: 563 KTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIG 622

Query: 679 GAEVYMPVCRQHYVSGQVVIETARTVLQ-QKVECG 713
           G+++YMPVCRQHYVSGQVV+E AR VL+ +KV+CG
Sbjct: 623 GSDIYMPVCRQHYVSGQVVVEAARIVLESEKVQCG 646

BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Match: A0A068VBC5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013184001 PE=3 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 2.300e-244
Identity = 437/719 (60.78%), Postives = 553/719 (76.91%), Query Frame = 1

		  

Query: 5   IAKMKSLISPKTFSLLPPPHKSPSFLLYFRPSLLQNPPKF-LSPL---QPSYPR------ 64
           I+++K ++    F L   P K+PSFLL    +  +NP  F + PL   QPS+ +      
Sbjct: 4   ISRIKWVLQNPLF-LHQHPIKNPSFLL---KTPTRNPRFFAVKPLLNPQPSHQQHHHHCQ 63

Query: 65  LRTLRCYASSSSQHMQQYPSPQPPSSSCGEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQ 124
           +R L+  A+S++            +SS GEIHVIVGPMFAGKTS+LLRRI++ESSNGSFQ
Sbjct: 64  MRDLKSEATSAAA-----------ASSSGEIHVIVGPMFAGKTSTLLRRIKTESSNGSFQ 123

Query: 125 AAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGK 184
           A   +  +L LDK+LKDLC+SGR+ EA+R+LC   V V+  TY+LLLQDCI    +  GK
Sbjct: 124 A-DAREIALQLDKSLKDLCFSGRVVEAVRMLCHARVQVESETYSLLLQDCIFRKDYSLGK 183

Query: 185 SIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRS 244
            IH  M+++G   NEYL  KLLILY KAG L  A ILF++L  KSL+SWN+MIAGYVQ  
Sbjct: 184 KIHWQMIIIGCVPNEYLNVKLLILYAKAGDLNLAHILFDKLQMKSLVSWNSMIAGYVQIG 243

Query: 245 MEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNS 304
           +E+VGLS++HKMR  G+ PD ++FASVFRACASLA+LEQGRQAH + +KC I  N++VNS
Sbjct: 244 LEEVGLSMFHKMRKNGLIPDHYSFASVFRACASLAILEQGRQAHALWIKCQISGNLVVNS 303

Query: 305 ALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRP 364
           AL+DMYFKCS L++GH VF K  D+N++TW+ALISGYG +GR  EV+E F  M+  G RP
Sbjct: 304 ALVDMYFKCSSLSEGHIVFEKFLDRNIVTWSALISGYGQHGRVVEVIESFHRMLDAGFRP 363

Query: 365 NYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNF 424
           N+VTFL VLSACSH GLV++GW+YF+ M  DYGIQP  KH+AA+VDLLGRAGRL +AY F
Sbjct: 364 NHVTFLVVLSACSHGGLVNKGWEYFTSMTRDYGIQPKGKHYAAMVDLLGRAGRLADAYEF 423

Query: 425 INSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMW 484
           + +SPCKD+ VVWG+LLGAC+ HGN+ L +++AK +F LEP +AGKYVVLS+ +AS  +W
Sbjct: 424 VVNSPCKDHPVVWGALLGACKNHGNMDLAKIAAKNFFKLEPGSAGKYVVLSNAYASFGLW 483

Query: 485 ESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDS 544
           ++VAE+  +M +SG++K+PGYS IE+Q E HFFF   DTH+  ++ +++++ LTC + D 
Sbjct: 484 DNVAEIRSVMNESGMRKEPGYSMIEIQREAHFFFMEHDTHEKTEELHQLIEDLTCVLTDM 543

Query: 545 GYIPDLVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDV 604
           G +  L+S  VAVIKS KDTRY L+ IVTHDG+KLPC  L +LSSFRQK GS AYD+LDV
Sbjct: 544 GML--LIS--VAVIKSDKDTRYALDLIVTHDGEKLPCWPLANLSSFRQKLGSEAYDKLDV 603

Query: 605 IGIDEAQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTAR 664
           IGIDEAQFFEDLYDFC  AAD DGKT+IVAGLDGDYLRRSFGSVL +IP+ADSVTKL AR
Sbjct: 604 IGIDEAQFFEDLYDFCGEAADLDGKTVIVAGLDGDYLRRSFGSVLQVIPLADSVTKLNAR 663

Query: 665 CELCGKPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQ-QKVECG 713
           CELCG+ A FTLRKT+E +TELI GAEVYMPVCR+HYVSGQVV E A+TVL+ Q+V+CG
Sbjct: 664 CELCGRQAFFTLRKTEETETELIAGAEVYMPVCRKHYVSGQVVKEAAKTVLESQRVQCG 702

BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Match: M1B0X6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013288 PE=3 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 2.100e-242
Identity = 418/667 (62.67%), Postives = 526/667 (78.86%), Query Frame = 1

		  

Query: 50  PSYPRLRTLRCYASSSSQHMQQYPSPQPPSSSCGEIHVIVGPMFAGKTSSLLRRIQSESS 109
           P++ ++R L   AS SS             S  GE+HVIVGPMFAGKT++LL+RI+SE S
Sbjct: 16  PNHNQIRVLNSEASGSS-------------SGSGEVHVIVGPMFAGKTTTLLKRIKSERS 75

Query: 110 NGSFQAAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGA 169
           NGSFQA  +K+S L LD+T+K LC+SGR+ EA+ +LCR+ V V+  TY+L+LQ+CI   A
Sbjct: 76  NGSFQANGVKNS-LYLDETIKGLCFSGRVAEAVGILCRSGVQVEAETYSLVLQECIFRQA 135

Query: 170 HEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAG 229
           ++ GK +H  M+ VGF  NEYL  KLLILY KAG L T+ I+F++L  KSL+SWNAMIAG
Sbjct: 136 YKKGKRVHWQMITVGFVPNEYLTVKLLILYAKAGDLDTSHIIFDKLQFKSLVSWNAMIAG 195

Query: 230 YVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKN 289
           YVQ+ ME+VGLSLYH M+   V PDQ+TF+SVFRACASLA+LEQG+QAH +L+K  I  N
Sbjct: 196 YVQKGMEEVGLSLYHDMKQRDVLPDQYTFSSVFRACASLAVLEQGKQAHALLIKSQISGN 255

Query: 290 VIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIK 349
           ++VNSALMDMYFKCS  +DG+ VF KS ++NVITWTALISGYG NGR  +VLE F  MI 
Sbjct: 256 IVVNSALMDMYFKCSSPSDGYLVFSKSLERNVITWTALISGYGQNGRIKDVLESFHRMID 315

Query: 350 EGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLD 409
           EG RPN+VTFLAVLSACSH GLVD G +YFS M  DYG+QP  KH+AAIVDLLGRAGRL 
Sbjct: 316 EGYRPNHVTFLAVLSACSHGGLVDRGKEYFSSMMRDYGLQPRGKHYAAIVDLLGRAGRLQ 375

Query: 410 EAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFA 469
           EA+ F+ +S C+++ V+WGSLLGAC++HG++++++L+A+ +FDLEP+NAGKYVVLS+ +A
Sbjct: 376 EAHEFVKNSRCEEHPVLWGSLLGACKIHGDIEMVKLAARNFFDLEPENAGKYVVLSNAYA 435

Query: 470 SHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLK---V 529
           S  +W +VAE+  LM+DSGVKK+PGYS IE+Q + HFFF   + H+   + Y+++K   V
Sbjct: 436 SFGLWNNVAEIRRLMKDSGVKKEPGYSMIEVQRQAHFFFMEHNAHEQTAEIYKLVKDMAV 495

Query: 530 LTCAIVDSGYI-PDLVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFG 589
            T ++   G +   + +  VA++KS KDTRY L+SIVTHDGDKLPC  L +LSSF+Q+ G
Sbjct: 496 STVSLASRGLLFASMRNISVAILKSDKDTRYGLDSIVTHDGDKLPCWPLANLSSFKQRCG 555

Query: 590 SIAYDELDVIGIDEAQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVA 649
             AY +L+VIGIDEAQFFEDLYDFC+  ADHDGK +IVAGLDGDYLRRSFGSVL +IP+A
Sbjct: 556 PEAYSKLEVIGIDEAQFFEDLYDFCKEVADHDGKIVIVAGLDGDYLRRSFGSVLDVIPIA 615

Query: 650 DSVTKLTARCELCGKPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVL 709
           DSVTKLTARCELCG+ A FTLRKT+E +TELI GAEVYMPVCR+HYVSGQVV E AR+VL
Sbjct: 616 DSVTKLTARCELCGERASFTLRKTEETRTELIAGAEVYMPVCRKHYVSGQVVKEAARSVL 668

Query: 710 Q-QKVEC 712
           + QKVEC
Sbjct: 676 ESQKVEC 668

BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Match: A0A118K094_CYNCS (Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020608 PE=3 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 9.600e-227
Identity = 418/707 (59.12%), Postives = 523/707 (73.97%), Query Frame = 1

		  

Query: 8   MKSLISP-KTFSLLPPPHKSPSFLLYFRPSL-LQNPPKFLSPLQPSY-PRLRTLRCYASS 67
           MKSLI P +T S+L P        L F PS  L +   F+    P + P +R+LR  +SS
Sbjct: 2   MKSLIFPSRTASILIPN-------LVFNPSKSLSSVSNFVPIRNPHFIPEVRSLRSPSSS 61

Query: 68  SSQHMQQYPSPQPPSSS-C----GEIHVIVGPMFAGKTSSLLRRIQSESSNGSFQAAKIK 127
            S     Y S  P  +  C    GEIHVIVGPMFAGKT++LL R++SESSNG FQA +  
Sbjct: 62  FS-----YSSSSPDENGHCYQTEGEIHVIVGPMFAGKTTTLLHRMKSESSNGRFQA-RDS 121

Query: 128 SSSLLLDKTLKDLCYSGRLREAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAH 187
            +   +DKTLK+LC SGRL EA+RLLC T   VD  TY+LLLQDCI    +  G+ IH+ 
Sbjct: 122 DNFRNVDKTLKNLCLSGRLAEAVRLLCHTGQQVDSETYSLLLQDCIFKKYYHHGRRIHSQ 181

Query: 188 MVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVG 247
           MVVVGF  NEYLK KLLILY K+G L TA ILFN LL  ++ISWN MIAGYVQ+ +E++G
Sbjct: 182 MVVVGFLPNEYLKIKLLILYAKSGDLVTAHILFNRLLMPNVISWNTMIAGYVQKGLEEMG 241

Query: 248 LSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDM 307
           LSLY+ MR  G+TPDQFTFASVFRACA+LA+LEQG++ H +L+K  I  NV+VNSAL+DM
Sbjct: 242 LSLYYNMRQSGLTPDQFTFASVFRACATLAMLEQGKRVHAVLIKNQISGNVVVNSALIDM 301

Query: 308 YFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTF 367
           YFKCSC  DGH VF K+ DKNV+TWT+LISGYG +GR  EVL++F  MI EG RPN +TF
Sbjct: 302 YFKCSCPYDGHLVFDKALDKNVVTWTSLISGYGQHGRVKEVLDVFHRMIDEGFRPNNITF 361

Query: 368 LAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSP 427
           LAVLSACSH GLV EGW YF  M+ DYGIQP  KH+AA+VDLLGR+GRLDEAY F+ ++P
Sbjct: 362 LAVLSACSHGGLVGEGWNYFRAMRRDYGIQPREKHYAAMVDLLGRSGRLDEAYEFVRNAP 421

Query: 428 CKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAE 487
            KD+ V+WG+LL AC+++GN+ +++++AK YF+LEP+N GKYVVLS+ +A+   W +VAE
Sbjct: 422 FKDHPVIWGALLQACKVYGNMDMVKIAAKNYFELEPENVGKYVVLSNAYATFGEWSNVAE 481

Query: 488 VWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPD 547
           +  ++++ G+KK+PGYS IE    +         +K      EM  + +  +        
Sbjct: 482 IRSVLKELGMKKEPGYSMIETLAIIS--TSRLLAYKQLFHFGEMRSIFSFQL-------- 541

Query: 548 LVSEKVAVIKSSKDTRYELNSIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGIDE 607
            +++ VA+IKSSKDTRY L+SIVTHDG+KLPC  L  LSSF+++ G  AY +L+VIGIDE
Sbjct: 542 WMNQNVAIIKSSKDTRYGLDSIVTHDGEKLPCWPLEALSSFKERIGIEAYHKLEVIGIDE 601

Query: 608 AQFFEDLYDFCERAADHDGKTIIVAGLDGDYLRRSFGSVLSIIPVADSVTKLTARCELCG 667
           AQFF+DLYDFC +AADHDGKT+IVAGLDGDYLRRSFG VL IIP+A+SVTKL ARCELCG
Sbjct: 602 AQFFDDLYDFCIKAADHDGKTVIVAGLDGDYLRRSFG-VLDIIPIAESVTKLKARCELCG 661

Query: 668 KPACFTLRKTDERQTELIGGAEVYMPVCRQHYVSGQVVIETARTVLQ 707
           KPA FTLRKT+E + EL+ GA+VYMPVCR+HYVSGQ V E ARTVL+
Sbjct: 662 KPAFFTLRKTEETERELVAGADVYMPVCRKHYVSGQGVKEAARTVLE 684

BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2)

HSP 1 Score: 504.2 bits (1297), Expect = 2.300e-141
Identity = 244/450 (54.22%), Postives = 327/450 (72.67%), Query Frame = 1

		  

Query: 90  GPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTE 149
           G MF+G  +++LRR+ +E   G FQ    + +  L DKTLK LC +GRL+EA+ LL  + 
Sbjct: 45  GSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKL-DKTLKGLCVTGRLKEAVGLLWSSG 104

Query: 150 VAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTAC 209
           + V+  TYA+LLQ+C     +  GK IHA M VVGF LNEYLK KLLILY  +G L TA 
Sbjct: 105 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 164

Query: 210 ILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLA 269
           ILF  L  + LI WNAMI+GYVQ+ +E  GL +Y+ MR   + PDQ+TFASVFRAC++L 
Sbjct: 165 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 224

Query: 270 LLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALIS 329
            LE G++AH +++K  I  N+IV+SAL+DMYFKCS  +DGH+VF +   +NVITWT+LIS
Sbjct: 225 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 284

Query: 330 GYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQ 389
           GYG++G+  EVL+ F++M +EG RPN VTFL VL+AC+H GLVD+GW++F  MK DYGI+
Sbjct: 285 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 344

Query: 390 PHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKK 449
           P  +H+AA+VD LGRAGRL EAY F+  SPCK++  VWGSLLGACR+HGNVKLLEL+A K
Sbjct: 345 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATK 404

Query: 450 YFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFK 509
           + +L+P N G YVV ++ +AS  + E+ ++V   M ++GVKKDPGYS+IELQ EVH F K
Sbjct: 405 FLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMK 464

Query: 510 GDDTHKDAKDTYEMLKVLTCAIVDSGYIPD 540
            D +H+ ++  Y+ +  +T   +D  Y PD
Sbjct: 465 DDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493

BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.100e-90
Identity = 172/485 (35.46%), Postives = 279/485 (57.53%), Query Frame = 1

		  

Query: 140 EAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILY 199
           E + L+ R  V  + +TY+ +L+ C   G  +  + +H  ++  G   + ++++ L+ ++
Sbjct: 148 ELLVLMLRDNVRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVF 207

Query: 200 CKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFA 259
            K G+   A  +F+E++    I WN++I G+ Q S  DV L L+ +M+  G   +Q T  
Sbjct: 208 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 267

Query: 260 SVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDK 319
           SV RAC  LALLE G QAH  +VK    +++I+N+AL+DMY KC  L D  +VF +  ++
Sbjct: 268 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 327

Query: 320 NVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYF 379
           +VITW+ +ISG   NG + E L+LF+ M   G +PNY+T + VL ACSH GL+++GW YF
Sbjct: 328 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 387

Query: 380 SLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGN 439
             MK  YGI P R+H+  ++DLLG+AG+LD+A   +N   C+ ++V W +LLGACR+  N
Sbjct: 388 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRN 447

Query: 440 VKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIE 499
           + L E +AKK   L+P++AG Y +LS+ +A+   W+SV E+   MRD G+KK+PG S IE
Sbjct: 448 MVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 507

Query: 500 LQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYELN 559
           +  ++H F  GD++H    +  + L  L   +   GY+P              +T + L 
Sbjct: 508 VNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP--------------ETNFVLQ 567

Query: 560 SIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGI-DEAQFFEDLYDFCERAADHDG 619
            +   +G+++     H        FG +      VI I    +   D + FC+ A+  + 
Sbjct: 568 DL---EGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEI 610

Query: 620 KTIIV 624
           ++I++
Sbjct: 628 RSIVI 610

BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.300e-88
Identity = 158/379 (41.69%), Postives = 234/379 (61.74%), Query Frame = 1

		  

Query: 161 LQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSL 220
           L  C   G  E G+ IH   V +G   N  +   L+ +YCK  ++ TA  +F +L  ++L
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 221 ISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGI 280
           +SWNAMI G+ Q       L+ + +MR   V PD FT+ SV  A A L++    +  HG+
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 281 LVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEV 340
           +++  + KNV V +AL+DMY KC  +     +F    +++V TW A+I GYG +G     
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 341 LELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVD 400
           LELF+EM K  ++PN VTFL+V+SACSH GLV+ G K F +MK +Y I+    H+ A+VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583

Query: 401 LLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGK 460
           LLGRAGRL+EA++FI   P K    V+G++LGAC++H NV   E +A++ F+L P + G 
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643

Query: 461 YVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDT 520
           +V+L++ + + +MWE V +V   M   G++K PG S +E++NEVH FF G   H D+K  
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703

Query: 521 YEMLKVLTCAIVDSGYIPD 540
           Y  L+ L C I ++GY+PD
Sbjct: 704 YAFLEKLICHIKEAGYVPD 722

BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.500e-84
Identity = 161/414 (38.89%), Postives = 244/414 (58.94%), Query Frame = 1

		  

Query: 135 SGRLREAIRLLCR---TEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYL 194
           +G   EA++L  R     +    +T   +L  C      E GK +H+ ++ +GF  + + 
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359

Query: 195 KTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGV 254
            T L+ +Y KAG L  A   F+ L E+ +  W ++I+GYVQ S  +  L LY +M+  G+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419

Query: 255 TPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQ 314
            P+  T ASV +AC+SLA LE G+Q HG  +K G G  V + SAL  MY KC  L DG+ 
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479

Query: 315 VFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGL 374
           VF ++P+K+V++W A+ISG  HNG+ DE LELF+EM+ EG+ P+ VTF+ ++SACSH+G 
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539

Query: 375 VDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLL 434
           V+ GW YF++M +  G+ P   H+A +VDLL RAG+L EA  FI S+       +W  LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599

Query: 435 GACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKK 494
            AC+ HG  +L   + +K   L  + +  YV LS  + +      V  VW  MR +GV K
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659

Query: 495 DPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKV 546
           + G S IEL+N+ H F  GD  H   ++T +++ +++  +++ G++  L S  V
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFV 713

BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 313.2 bits (801), Expect = 7.600e-84
Identity = 148/370 (40.00%), Postives = 231/370 (62.43%), Query Frame = 1

		  

Query: 174 KSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQR 233
           K +H   V     LN Y+ T LL LY K G +  A  +F  + +KS ++W++M+AGYVQ 
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241

Query: 234 SMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVN 293
              +  L LY + + + +  +QFT +SV  AC++LA L +G+Q H ++ K G G NV V 
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301

Query: 294 SALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLR 353
           S+ +DMY KC  L + + +F +  +KN+  W  +ISG+  + R  EV+ LF++M ++G+ 
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361

Query: 354 PNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYN 413
           PN VTF ++LS C H GLV+EG ++F LM+  YG+ P+  H++ +VD+LGRAG L EAY 
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421

Query: 414 FINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAM 473
            I S P    + +WGSLL +CR++ N++L E++A+K F+LEP+NAG +V+LS+ +A++  
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481

Query: 474 WESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVD 533
           WE +A+   L+RD  VKK  G S I+++++VH F  G+  H   ++    L  L      
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541

Query: 534 SGYIPDLVSE 544
            GY P +  E
Sbjct: 542 FGYKPSVEHE 551

BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Match: AT4G16470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 504.2 bits (1297), Expect = 1.300e-142
Identity = 244/450 (54.22%), Postives = 327/450 (72.67%), Query Frame = 1

		  

Query: 90  GPMFAGKTSSLLRRIQSESSNGSFQAAKIKSSSLLLDKTLKDLCYSGRLREAIRLLCRTE 149
           G MF+G  +++LRR+ +E   G FQ    + +  L DKTLK LC +GRL+EA+ LL  + 
Sbjct: 45  GSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKL-DKTLKGLCVTGRLKEAVGLLWSSG 104

Query: 150 VAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTAC 209
           + V+  TYA+LLQ+C     +  GK IHA M VVGF LNEYLK KLLILY  +G L TA 
Sbjct: 105 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 164

Query: 210 ILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLA 269
           ILF  L  + LI WNAMI+GYVQ+ +E  GL +Y+ MR   + PDQ+TFASVFRAC++L 
Sbjct: 165 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 224

Query: 270 LLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALIS 329
            LE G++AH +++K  I  N+IV+SAL+DMYFKCS  +DGH+VF +   +NVITWT+LIS
Sbjct: 225 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 284

Query: 330 GYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQ 389
           GYG++G+  EVL+ F++M +EG RPN VTFL VL+AC+H GLVD+GW++F  MK DYGI+
Sbjct: 285 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 344

Query: 390 PHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKK 449
           P  +H+AA+VD LGRAGRL EAY F+  SPCK++  VWGSLLGACR+HGNVKLLEL+A K
Sbjct: 345 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATK 404

Query: 450 YFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFK 509
           + +L+P N G YVV ++ +AS  + E+ ++V   M ++GVKKDPGYS+IELQ EVH F K
Sbjct: 405 FLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMK 464

Query: 510 GDDTHKDAKDTYEMLKVLTCAIVDSGYIPD 540
            D +H+ ++  Y+ +  +T   +D  Y PD
Sbjct: 465 DDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493

BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 333.2 bits (853), Expect = 4.000e-91
Identity = 172/485 (35.46%), Postives = 279/485 (57.53%), Query Frame = 1

		  

Query: 140 EAIRLLCRTEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILY 199
           E + L+ R  V  + +TY+ +L+ C   G  +  + +H  ++  G   + ++++ L+ ++
Sbjct: 148 ELLVLMLRDNVRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVF 207

Query: 200 CKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFA 259
            K G+   A  +F+E++    I WN++I G+ Q S  DV L L+ +M+  G   +Q T  
Sbjct: 208 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 267

Query: 260 SVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDK 319
           SV RAC  LALLE G QAH  +VK    +++I+N+AL+DMY KC  L D  +VF +  ++
Sbjct: 268 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 327

Query: 320 NVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYF 379
           +VITW+ +ISG   NG + E L+LF+ M   G +PNY+T + VL ACSH GL+++GW YF
Sbjct: 328 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 387

Query: 380 SLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGN 439
             MK  YGI P R+H+  ++DLLG+AG+LD+A   +N   C+ ++V W +LLGACR+  N
Sbjct: 388 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRN 447

Query: 440 VKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIE 499
           + L E +AKK   L+P++AG Y +LS+ +A+   W+SV E+   MRD G+KK+PG S IE
Sbjct: 448 MVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 507

Query: 500 LQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKVAVIKSSKDTRYELN 559
           +  ++H F  GD++H    +  + L  L   +   GY+P              +T + L 
Sbjct: 508 VNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP--------------ETNFVLQ 567

Query: 560 SIVTHDGDKLPCLALHDLSSFRQKFGSIAYDELDVIGI-DEAQFFEDLYDFCERAADHDG 619
            +   +G+++     H        FG +      VI I    +   D + FC+ A+  + 
Sbjct: 568 DL---EGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEI 610

Query: 620 KTIIV 624
           ++I++
Sbjct: 628 RSIVI 610

BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 328.2 bits (840), Expect = 1.300e-89
Identity = 158/379 (41.69%), Postives = 234/379 (61.74%), Query Frame = 1

		  

Query: 161 LQDCIHGGAHEWGKSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSL 220
           L  C   G  E G+ IH   V +G   N  +   L+ +YCK  ++ TA  +F +L  ++L
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 221 ISWNAMIAGYVQRSMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGI 280
           +SWNAMI G+ Q       L+ + +MR   V PD FT+ SV  A A L++    +  HG+
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 281 LVKCGIGKNVIVNSALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEV 340
           +++  + KNV V +AL+DMY KC  +     +F    +++V TW A+I GYG +G     
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 341 LELFDEMIKEGLRPNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVD 400
           LELF+EM K  ++PN VTFL+V+SACSH GLV+ G K F +MK +Y I+    H+ A+VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583

Query: 401 LLGRAGRLDEAYNFINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGK 460
           LLGRAGRL+EA++FI   P K    V+G++LGAC++H NV   E +A++ F+L P + G 
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643

Query: 461 YVVLSHTFASHAMWESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDT 520
           +V+L++ + + +MWE V +V   M   G++K PG S +E++NEVH FF G   H D+K  
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703

Query: 521 YEMLKVLTCAIVDSGYIPD 540
           Y  L+ L C I ++GY+PD
Sbjct: 704 YAFLEKLICHIKEAGYVPD 722

BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 313.9 bits (803), Expect = 2.500e-85
Identity = 161/414 (38.89%), Postives = 244/414 (58.94%), Query Frame = 1

		  

Query: 135 SGRLREAIRLLCR---TEVAVDWHTYALLLQDCIHGGAHEWGKSIHAHMVVVGFTLNEYL 194
           +G   EA++L  R     +    +T   +L  C      E GK +H+ ++ +GF  + + 
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359

Query: 195 KTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQRSMEDVGLSLYHKMRHIGV 254
            T L+ +Y KAG L  A   F+ L E+ +  W ++I+GYVQ S  +  L LY +M+  G+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419

Query: 255 TPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVNSALMDMYFKCSCLTDGHQ 314
            P+  T ASV +AC+SLA LE G+Q HG  +K G G  V + SAL  MY KC  L DG+ 
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479

Query: 315 VFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLRPNYVTFLAVLSACSHRGL 374
           VF ++P+K+V++W A+ISG  HNG+ DE LELF+EM+ EG+ P+ VTF+ ++SACSH+G 
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539

Query: 375 VDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYNFINSSPCKDNSVVWGSLL 434
           V+ GW YF++M +  G+ P   H+A +VDLL RAG+L EA  FI S+       +W  LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599

Query: 435 GACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAMWESVAEVWGLMRDSGVKK 494
            AC+ HG  +L   + +K   L  + +  YV LS  + +      V  VW  MR +GV K
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659

Query: 495 DPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVDSGYIPDLVSEKV 546
           + G S IEL+N+ H F  GD  H   ++T +++ +++  +++ G++  L S  V
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFV 713

BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 313.2 bits (801), Expect = 4.300e-85
Identity = 148/370 (40.00%), Postives = 231/370 (62.43%), Query Frame = 1

		  

Query: 174 KSIHAHMVVVGFTLNEYLKTKLLILYCKAGKLGTACILFNELLEKSLISWNAMIAGYVQR 233
           K +H   V     LN Y+ T LL LY K G +  A  +F  + +KS ++W++M+AGYVQ 
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241

Query: 234 SMEDVGLSLYHKMRHIGVTPDQFTFASVFRACASLALLEQGRQAHGILVKCGIGKNVIVN 293
              +  L LY + + + +  +QFT +SV  AC++LA L +G+Q H ++ K G G NV V 
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301

Query: 294 SALMDMYFKCSCLTDGHQVFIKSPDKNVITWTALISGYGHNGRTDEVLELFDEMIKEGLR 353
           S+ +DMY KC  L + + +F +  +KN+  W  +ISG+  + R  EV+ LF++M ++G+ 
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361

Query: 354 PNYVTFLAVLSACSHRGLVDEGWKYFSLMKNDYGIQPHRKHFAAIVDLLGRAGRLDEAYN 413
           PN VTF ++LS C H GLV+EG ++F LM+  YG+ P+  H++ +VD+LGRAG L EAY 
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421

Query: 414 FINSSPCKDNSVVWGSLLGACRLHGNVKLLELSAKKYFDLEPKNAGKYVVLSHTFASHAM 473
            I S P    + +WGSLL +CR++ N++L E++A+K F+LEP+NAG +V+LS+ +A++  
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481

Query: 474 WESVAEVWGLMRDSGVKKDPGYSRIELQNEVHFFFKGDDTHKDAKDTYEMLKVLTCAIVD 533
           WE +A+   L+RD  VKK  G S I+++++VH F  G+  H   ++    L  L      
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541

Query: 534 SGYIPDLVSE 544
            GY P +  E
Sbjct: 542 FGYKPSVEHE 551

The following BLAST results are available for this feature:
BLAST of Spo19220.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|296088921|emb|CBI38481.3|7.5e-25767.6unnamed protein product [Vitis... [more]
gi|567915151|ref|XP_006449889.1|3.2e-24765.5hypothetical protein CICLE_v10... [more]
gi|661878406|emb|CDP17864.1|3.3e-24460.7unnamed protein product [Coffe... [more]
gi|731350738|ref|XP_010686658.1|3.9e-22962.9PREDICTED: pentatricopeptide r... [more]
gi|976915141|gb|KVI01112.1|1.4e-22659.1Pentatricopeptide repeat-conta... [more]
back to top
BLAST of Spo19220.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
F6I2E4_VITVI1.8e-24966.8Putative uncharacterized prote... [more]
V4WA23_9ROSI2.2e-24765.5Uncharacterized protein OS=Cit... [more]
A0A068VBC5_COFCA2.3e-24460.7Uncharacterized protein OS=Cof... [more]
M1B0X6_SOLTU2.1e-24262.6Uncharacterized protein OS=Sol... [more]
A0A118K094_CYNCS9.6e-22759.1Pentatricopeptide repeat-conta... [more]
back to top
BLAST of Spo19220.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP315_ARATH2.3e-14154.2Pentatricopeptide repeat-conta... [more]
PP147_ARATH7.1e-9035.4Pentatricopeptide repeat-conta... [more]
PPR32_ARATH2.3e-8841.6Pentatricopeptide repeat-conta... [more]
PP181_ARATH4.5e-8438.8Pentatricopeptide repeat-conta... [more]
PP364_ARATH7.6e-8440.0Pentatricopeptide repeat-conta... [more]
back to top
BLAST of Spo19220.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G16470.11.3e-14254.2Tetratricopeptide repeat (TPR)... [more]
AT2G03880.14.0e-9135.4Pentatricopeptide repeat (PPR)... [more]
AT1G11290.11.3e-8941.6Pentatricopeptide repeat (PPR)... [more]
AT2G33680.12.5e-8538.8Tetratricopeptide repeat (TPR)... [more]
AT5G04780.14.3e-8540.0Pentatricopeptide repeat (PPR)... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001267Thymidine kinasePFAMPF00265TKcoord: 541..691
score: 6.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 195..218
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 219..266
score: 7.9E-8coord: 319..367
score: 2.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 221..254
score: 1.2E-4coord: 357..390
score: 5.1E-4coord: 322..355
score: 5.9
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 320..354
score: 14.326coord: 219..253
score: 10.238coord: 254..288
score: 6.358coord: 153..187
score: 6.215coord: 391..425
score: 5.656coord: 457..491
score: 7.235coord: 355..385
score: 7.947coord: 188..218
score:
IPR020633Thymidine kinase, conserved sitePROSITEPS00603TK_CELLULAR_TYPEcoord: 678..691
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 542..652
score: 1.95
NoneNo IPR availableGENE3D3.30.60.20coord: 652..693
score: 3.9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 125..498
score: 9.5E
NoneNo IPR availablePANTHERPTHR24015:SF484SUBFAMILY NOT NAMEDcoord: 125..498
score: 9.5E
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 652..694
score: 4.75

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006230 TMP biosynthetic process
molecular_function GO:0005524 ATP binding
molecular_function GO:0004797 thymidine kinase activity