Spo19236.1 (mRNA) | SpinachBase

Overview


Name	Spo19236.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L26-1
Location	SpoScf_01790 : 103097 .. 103537 (+)
Sequence length	441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

mRNA sequence

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

Coding sequence (CDS)

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

Protein sequence

MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRGTFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDRKAKGKSAADKDKGTKFTAEDIMQTVD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19236	Spo19236	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19236.1	Spo19236.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19236.1.exon.1	Spo19236.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19236.1.CDS.1	Spo19236.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|902224205|gb|KNA19721.1| (hypothetical protein SOVF_059130 [Spinacia oleracea])

HSP 1 Score: 280.8 bits (717), Expect = 1.400e-72
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRK LLDR
Sbjct: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKGKSAADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|747054914|ref|XP_011073689.1| (PREDICTED: 60S ribosomal protein L26-1 [Sesamum indicum])

HSP 1 Score: 272.3 bits (695), Expect = 4.800e-70
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|848855845|ref|XP_012853951.1| (PREDICTED: 60S ribosomal protein L26-1 [Erythranthe guttata])

HSP 1 Score: 269.6 bits (688), Expect = 3.100e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|697190038|ref|XP_009604077.1| (PREDICTED: 60S ribosomal protein L26-1-like [Nicotiana tomentosiformis])

HSP 1 Score: 268.9 bits (686), Expect = 5.400e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRK+RKAHFTAPSSVRRV+MSAPLS DLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK V+TKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|698447251|ref|XP_009770504.1| (PREDICTED: 60S ribosomal protein L26-1-like [Nicotiana sylvestris])

HSP 1 Score: 268.9 bits (686), Expect = 5.400e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLS DLR+KYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSSDLRTKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK V+TKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJN0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059130 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.500e-73
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRK LLDR
Sbjct: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKGKSAADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A022RX16_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015764mg PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.200e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: W9RS71_9ROSA (60S ribosomal protein L26-1 OS=Morus notabilis GN=L484_009395 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.100e-68
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI+PSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQ+VD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A022QLP7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015787mg PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.900e-68
Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT EDIMQT+D
Sbjct: 121 KAKGRAAADKEKGTKFTTEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: W9RUQ0_9ROSA (60S ribosomal protein L26-1 OS=Morus notabilis GN=L484_009396 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.200e-68
Identity = 136/146 (93.15%), Postives = 144/146 (98.63%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI+PSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQ+VD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 1.000e-64
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLS DLR KYNVRSMP+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNG+TVNVGI PSK VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT+ED+MQ VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.400e-63
Identity = 120/146 (82.19%), Postives = 139/146 (95.21%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKV+QVYR+KWVIHIERITREKVNGSTVNVG++ S  +ITKLRLDKDRK LL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KA G++AADK+KGTKF+AED+M+ VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_BRACM (60S ribosomal protein L26 OS=Brassica campestris GN=RPL26 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.000e-59
Identity = 114/145 (78.62%), Postives = 131/145 (90.34%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRR++RK HFTA SS RRV MS+PLS DLR KYNVRSMP+RKDDE Q+VRG
Sbjct: 1   MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGK+ QVYR+K VIHIER+TREKVNG+TVNVG+ P+K VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTV 146
           KAKG++AADKDKGTKFTA D+MQ V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-44
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGRE-GKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLD 120
            +KG++ GKVVQVYRKK+VI+IER+ REK NG+TV+VGIHPSK VIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGKSAADKDKGTKFTAEDI 142
           RKAK +    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-44
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGRE-GKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLD 120
            +KG++ GKVVQVYRKK+VI+IER+ REK NG+TV+VGIHPSK VIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGKSAADKDKGTKFTAEDI 142
           RKAK +    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Match: AT3G49910.1 (Translation protein SH3-like family protein)

HSP 1 Score: 247.3 bits (630), Expect = 5.900e-66
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLS DLR KYNVRSMP+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNG+TVNVGI PSK VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT+ED+MQ VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Match: AT5G67510.1 (Translation protein SH3-like family protein)

HSP 1 Score: 241.9 bits (616), Expect = 2.500e-64
Identity = 120/146 (82.19%), Postives = 139/146 (95.21%), Query Frame = 1


		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKV+QVYR+KWVIHIERITREKVNGSTVNVG++ S  +ITKLRLDKDRK LL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KA G++AADK+KGTKF+AED+M+ VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

The following BLAST results are available for this feature:

BLAST of Spo19236.1 vs. NCBI nr
BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
BLAST of Spo19236.1 vs. TAIR (Arabidopsis)

BLAST of Spo19236.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902224205\|gb\|KNA19721.1\|	1.4e-72	99.3	hypothetical protein SOVF_0591...	[more]
gi\|747054914\|ref\|XP_011073689.1\|	4.8e-70	95.2	PREDICTED: 60S ribosomal prote...	[more]
gi\|848855845\|ref\|XP_012853951.1\|	3.1e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|697190038\|ref\|XP_009604077.1\|	5.4e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|698447251\|ref\|XP_009770504.1\|	5.4e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RJN0_SPIOL	9.5e-73	99.3	Uncharacterized protein OS=Spi...	[more]
A0A022RX16_ERYGU	2.2e-69	93.8	Uncharacterized protein OS=Ery...	[more]
W9RS71_9ROSA	1.1e-68	93.8	60S ribosomal protein L26-1 OS...	[more]
A0A022QLP7_ERYGU	1.9e-68	92.4	Uncharacterized protein OS=Ery...	[more]
W9RUQ0_9ROSA	3.2e-68	93.1	60S ribosomal protein L26-1 OS...	[more]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RL261_ARATH	1.0e-64	84.9	60S ribosomal protein L26-1 OS...	[more]
RL262_ARATH	4.4e-63	82.1	60S ribosomal protein L26-2 OS...	[more]
RL26_BRACM	5.0e-59	78.6	60S ribosomal protein L26 OS=B...	[more]
RL26_MOUSE	1.2e-44	67.6	60S ribosomal protein L26 OS=M...	[more]
RL26_MACFA	1.2e-44	67.6	60S ribosomal protein L26 OS=M...	[more]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G49910.1	5.9e-66	84.9	Translation protein SH3-like f...	[more]
AT5G67510.1	2.5e-64	82.1	Translation protein SH3-like f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	HAMAP	MF_01326_A	Ribosomal_L24_A	coord: 9..121 score: 20
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	PANTHER	PTHR11143	60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER	coord: 2..146 score: 7.7E
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	PFAM	PF16906	Ribosomal_L26	coord: 8..121 score: 1.1
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	TIGRFAMs	TIGR01080	TIGR01080	coord: 8..122 score: 8.6
IPR005824	KOW	PFAM	PF00467	KOW	coord: 51..82 score: 7.2
IPR005824	KOW	SMART	SM00739	kow_9	coord: 48..75 score: 7.
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 52..69 scor
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 8..125 score: 2.71
IPR014722	Ribosomal protein L2 domain 2	GENE3D	2.30.30.30		coord: 7..125 score: 2.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome