Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTAGCGAGTAAGGCAGAGACGAAAGCTGCTGTTGATGCGGCTGCTTGGATGTTCAATGCTGTCACTTCGGTTGGAATTATTATTGTTAACAAGTTTTTGATGGCTACCTATGGCTTTAGTTTTGGTTAGTTTCTTGCAATAAAGTTTTTTGATGTTCTGTGCTGTCACTTCTCCACCCACACTACCGCAAAACCTATAAATTATATCCCTCTTCTGGAGAAATGAGGTTGCTATCTTGCAATGAAGAAGCATATTCACATGAAGATAAAGTGAATTAGCTTCTTCTTTTGCAGTTTGATTTGACAATAATGTGACTTGTCTTTGTGCGGATATGATCTGCCTGAATATTAGTGTTGGACATATTCAGATAAAAAAGAAAATTGTGAGTGATAAATGCAATGAAGCAAAGCCATGCTACTTCATGATTAGTCAATATCTACAGAGTAACAACTAATTGCTTAGATATGAGAAATTTGATTCATACGTGCTCTGTATCATGTTACATATGTATCTGGACATCAATTAGATTTTATTTCTGAGATTATTTGCTGTTCTTAGTCTCTTGTTTGGCAATTTTTTTTGTACTTCTCATATGCATACATTCAGCATAAACAAGCTCTCTCTTGCAGGCACACTAGTGAGAGAAGATGAGCATTAATTCGTAGATAGAAATAAAAAACATTTGGTAGGACTGCGAGATTGAAGTGAAGTTCACTGGCATCAATATGGATGCGTTTAGGGACTTGTCAGGGTTGAGCTATGACAGCTGTCCATTTTTGGTAAAAATGTAGCGTATTTAAAACAATTTTTTTTGAAGGAGCAGTGCCAATATTTATGTGGTTTCGTGAAGATATTGTTTAACGATGATAATAATGACCAGGGATAAATAATTTGAGCTTTCAGAGAGAGTTATTTCTGGAGTAGATTACCCAAGCATTTCATTCCACATCCCACATCACTCTTTGGAAAAACCATTTTCCTTTTCTGTATTTGTCCATTGGTTTATTGTCATTGTGAAAGATCTTCCATGTTCCCTAGATGTTTTGGTTGGGTTATAGAATATGCAGCTTCTGGTGATCGTTTCCCTTTTCCCCTTAATTAAATAGATTCAATGGTACATATTTGGTTGCCTATATCTTTATGATTTTGCAAGTATGTTATATATATGCAATATTACTGTCAATATTTCCTTTACATTTTTACCGACTTTATTAGTAACATTTTGCAGTGACGACTTTGACTGGATTACACTTTGTTGCCACTACATTGATGACGGTTGTTCTTCGCTGGCTTGGATTTATTCAACCTTCTCATTTACCTTTGCTGGAGCTGCTGAAATTTGTCTTGTTTGCAAATTTTTCAATTGTTGGCATGAATGTTAGTCTAATGTGGAACTCAGTGGGGTTTTATCAGGTGAGAGATCTGTTTGGTTTTGTCTTTCATTCTCCATACTCTTATTATTCCTGCAATAAATTTAAGCTGTTAATTCTCAGATAGCAAAGTTGAGCATGATTCCTGTACTGTGCCTGTTTGAGATCGTGTTTGATAGCATTCGATATTCTAGAGACACCAAGCTCAGCATTGGACTCGTTCTGATAGGTGTTGGTGTATGTACTGTTACTGACGTGAGCGTAAATATGAAAGGTTTTATAGCAGCGTCAATTGCAGTATGGAGTACTGCTCTGCAACAATATGTAAGTTTAAATTTACTTTTATTGACGTGTCTCCGTCAACAATTAAAGACAATGCCAATGAGATGAACTGACTAATTTGAGCAGAAAATTAATGTTAGAAATTATATTAATTTGGTAGAAAGATGATGAACACAAAATGGGTTACAAAAGGTAGTGACTTGAGGCCACCAATCTCTAGGTTCAGTGACATGAGGTCACCACTCTCCAAAGCCTAAGCTACCAAATTCTCAACATGTCCCTCATAACCTAATGTGCACTTATTTATAACTAGTCTACTACACCTACCTAATTTGTCTTCTACCTAATATTACTAACTACCTATTATGCCCTTCCCTTACACTAGATTCATTACAGCCTACTTATGTGGCAGCAGCCTGCAGGGCTAAAAATATACTCCGTATACCACTGGTTTGATGCCTTGATATTTATTCTTATGAATGGTGCTTGTACACAAGTAACTAAAAACCTTGCTCTGTGAATTCCTGGCATAATTGCCTCACTACTGTTCATTGGTACTCCGTACTTGATTATTATAGAGTTTTCACTGGCTGCAACCTAGCCTTGTAGGTGATTTTTTTTTAAATTCTGAATGGGGTATATGATTGTAGTTACCAGATTGAAGTTACAAGTAAGTTGTAAGGATCAGAAAACGCAGTATTCTCGCTGATTAGGGAACAACCCTCTCCGAGTATTGTGTTCTATTTGGATACCAAAGTGCTGAAATATTGTATTTATCGGAAAGTGGATGATGACGAAGTGTTGATTTTTCATTCTTGAGACATTAGGTTATGTACTGATATTGATGATCTTGTATGTTGGTGATTAGAAGGTTTCAAAGGGCTTGTTTTTATTGATCAGGTGCTTTTAGAATATTAATTGGATACTTTGACCAGCTGTAGTCTGTAGCTTTCAGTAAGAATTTTATAATGGATGACTTTGCAGATTTCATGGTCTTTATGAGGAATTTCTGCTTCCTCCAAGGCATGGTTTATGAGGGCTTGTGGAGATGTAGTACAAGTGTAGTGTGTGATTTTTCCCCGTTTTCTGATATTAGTTTTAAATTATGGGATTCCTTCTGCAGAAGCAAGTAAATTTTGGATCTTATAGGAAGTTTTCCACTGTTAAGCAGACTCATTTGTGTGCACCAAATTGACAATTGATAAGCCTTCTTGTCAATTACTTATTTGTACTTTATATATGTTACACTTTATATATATATGCTTGCTACCCTGTCATACCTTATTTCTTTTGTATATGAGTAAACTTTTTTTTGTGTTGCAAATGCAGTATGTGCATTTTCTCCAAAAGAAGTATTCACTCAGTTCATTCAACCTCTTGGGCCACACTGCACCAGCACAAGCTGGAACCCTGCTTTTACTGGGTCCGTTCCTGGATTACTGGCTGACAAATATGCGGATTGATGCATTCAACTATACTACACCATCTGTTGTAAGTAGACTTTCAATCTGTTGTCAAAACATTTTATCTTTTGTGGAGGAGGTGGCTTTTTTTCCATTGTCGGTGGCCTGGTGGGGGATATTGATTGCACTAGTCTGACTATCCACCTCTAAGGGTTGCCTAAAGCAGTATGCCCCGAATGGAAGTGGGCAAGAGTTTACTTGTATCTGATTCCATCTATGCAAAGTTATGATTGATAGTTTAGTTGGAATAGTCCGTTGTACTTCTTGAATCTGGACAATTATAATCCCCTGTGCAATGTTCAGTATGTCTTATGTGGCTCTATTTATCCGGAAACTTTCTTGGGTAAATTTTTCTGCTGATCTTGTGCATTTTTTCTTGCATTTCTGTAGTGTATATCTATTCTTTTTTCTTTCTGGAATCTGACAGGCGTTAATGAGGTACTGACGTGCAAGCATTACACTGCATTTTAAAATCTAATACTTCGTACATTCTATACCCTCTAATTTTTCCGTCTCTTCTACTTATCCTGCTGCACCGCCTGCACCTGTATAACTGTACTGCAATACTTTAATGCATCAAGTGCACACTGCTGGAAAACTAGGATCTCACATTATTGTTTGCTGACACTTTATATGAGTATGAACTTGATTCGATTCTTGGAGTAAAATAGTGCAATTATAACAGATCTATAATAACTAGTAACATATTTCAGTTTTTCTGTAGCCAATCTGCATTTTCTTGAATATTTCACCTATGTTTTGGTTCCTGCAGGTGTTGATTATTCTGTCATGCATGATTGCAATTGGGACAAACCTGAGCCAATTTATCTGCATCGGTCGATTCACAGCTGTGTCTTTCCAAGTACTTGGCCATATGAAGACAATCCTTGTTCTAATTCTAGGGTTCATCTTTTTTGGGAAAGAAGGTCTGAACATACAGGTGGTAGTGGGCATGATGATAGCTGTTCTAGGGATGATTTGGTACGGAAATGCCTCGTCAAAGCCCGGTGGAAAAGAGCGTCGGAGCCTTCCAACGTCCAAACAAAGGCATGGACAAGATTTCCCAGAAGATGAAAGAGTCTGATAGTTAGTACATAGGATGATTCGAGAAAATTCAAGTCGGGCTAGATTTTCTGAGGAAATGTTGTCATTTAATTCATTTATTTTAATTCTTTAATTCATTAGTTCAGTTGTTGACTGTTGTGCTGTCTATTAGAAGCATTGGGGTGATGTTATGTTTGTGTGAAAAATAGAGGACCCAGCTTATCAAATGTGAATGAAAACTTTTTAACTTAAACTTTTTA ATGGCTCTAGCGAGTAAGGCAGAGACGAAAGCTGCTGTTGATGCGGCTGCTTGGATGTTCAATGCTGTCACTTCGGTTGGAATTATTATTGTTAACAAGTTTTTGATGGCTACCTATGGCTTTAGTTTTGTGACGACTTTGACTGGATTACACTTTGTTGCCACTACATTGATGACGGTTGTTCTTCGCTGGCTTGGATTTATTCAACCTTCTCATTTACCTTTGCTGGAGCTGCTGAAATTTGTCTTGTTTGCAAATTTTTCAATTGTTGGCATGAATGTTAGTCTAATGTGGAACTCAGTGGGGTTTTATCAGATAGCAAAGTTGAGCATGATTCCTGTACTGTGCCTGTTTGAGATCGTGTTTGATAGCATTCGATATTCTAGAGACACCAAGCTCAGCATTGGACTCGTTCTGATAGGTGTTGGTGTATGTACTGTTACTGACGTGAGCGTAAATATGAAAGGTTTTATAGCAGCGTCAATTGCAGTATGGAGTACTGCTCTGCAACAATATTATGTGCATTTTCTCCAAAAGAAGTATTCACTCAGTTCATTCAACCTCTTGGGCCACACTGCACCAGCACAAGCTGGAACCCTGCTTTTACTGGGTCCGTTCCTGGATTACTGGCTGACAAATATGCGGATTGATGCATTCAACTATACTACACCATCTGTTGTGTTGATTATTCTGTCATGCATGATTGCAATTGGGACAAACCTGAGCCAATTTATCTGCATCGGTCGATTCACAGCTGTGTCTTTCCAAGTACTTGGCCATATGAAGACAATCCTTGTTCTAATTCTAGGGTTCATCTTTTTTGGGAAAGAAGGTCTGAACATACAGGTGGTAGTGGGCATGATGATAGCTGTTCTAGGGATGATTTGGTACGGAAATGCCTCGTCAAAGCCCGGTGGAAAAGAGCGTCGGAGCCTTCCAACGTCCAAACAAAGGCATGGACAAGATTTCCCAGAAGATGAAAGAGTCTGATAGTTAGTACATAGGATGATTCGAGAAAATTCAAGTCGGGCTAGATTTTCTGAGGAAATGTTGTCATTTAATTCATTTATTTTAATTCTTTAATTCATTAGTTCAGTTGTTGACTGTTGTGCTGTCTATTAGAAGCATTGGGGTGATGTTATGTTTGTGTGAAAAATAGAGGACCCAGCTTATCAAATGTGAATGAAAACTTTTTAACTTAAACTTTTTA ATGGCTCTAGCGAGTAAGGCAGAGACGAAAGCTGCTGTTGATGCGGCTGCTTGGATGTTCAATGCTGTCACTTCGGTTGGAATTATTATTGTTAACAAGTTTTTGATGGCTACCTATGGCTTTAGTTTTGTGACGACTTTGACTGGATTACACTTTGTTGCCACTACATTGATGACGGTTGTTCTTCGCTGGCTTGGATTTATTCAACCTTCTCATTTACCTTTGCTGGAGCTGCTGAAATTTGTCTTGTTTGCAAATTTTTCAATTGTTGGCATGAATGTTAGTCTAATGTGGAACTCAGTGGGGTTTTATCAGATAGCAAAGTTGAGCATGATTCCTGTACTGTGCCTGTTTGAGATCGTGTTTGATAGCATTCGATATTCTAGAGACACCAAGCTCAGCATTGGACTCGTTCTGATAGGTGTTGGTGTATGTACTGTTACTGACGTGAGCGTAAATATGAAAGGTTTTATAGCAGCGTCAATTGCAGTATGGAGTACTGCTCTGCAACAATATTATGTGCATTTTCTCCAAAAGAAGTATTCACTCAGTTCATTCAACCTCTTGGGCCACACTGCACCAGCACAAGCTGGAACCCTGCTTTTACTGGGTCCGTTCCTGGATTACTGGCTGACAAATATGCGGATTGATGCATTCAACTATACTACACCATCTGTTGTGTTGATTATTCTGTCATGCATGATTGCAATTGGGACAAACCTGAGCCAATTTATCTGCATCGGTCGATTCACAGCTGTGTCTTTCCAAGTACTTGGCCATATGAAGACAATCCTTGTTCTAATTCTAGGGTTCATCTTTTTTGGGAAAGAAGGTCTGAACATACAGGTGGTAGTGGGCATGATGATAGCTGTTCTAGGGATGATTTGGTACGGAAATGCCTCGTCAAAGCCCGGTGGAAAAGAGCGTCGGAGCCTTCCAACGTCCAAACAAAGGCATGGACAAGATTTCCCAGAAGATGAAAGAGTCTGA MALASKAETKAAVDAAAWMFNAVTSVGIIIVNKFLMATYGFSFVTTLTGLHFVATTLMTVVLRWLGFIQPSHLPLLELLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVLCLFEIVFDSIRYSRDTKLSIGLVLIGVGVCTVTDVSVNMKGFIAASIAVWSTALQQYYVHFLQKKYSLSSFNLLGHTAPAQAGTLLLLGPFLDYWLTNMRIDAFNYTTPSVVLIILSCMIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVLILGFIFFGKEGLNIQVVVGMMIAVLGMIWYGNASSKPGGKERRSLPTSKQRHGQDFPEDERV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo19249.1 vs. NCBI nr
Match: gi|902238100|gb|KNA25046.1| (hypothetical protein SOVF_010240 [Spinacia oleracea]) HSP 1 Score: 624.0 bits (1608), Expect = 1.500e-175 Identity = 328/329 (99.70%), Postives = 328/329 (99.70%), Query Frame = 1
BLAST of Spo19249.1 vs. NCBI nr
Match: gi|731335512|ref|XP_010678762.1| (PREDICTED: UDP-galactose transporter 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 566.6 bits (1459), Expect = 2.800e-158 Identity = 298/330 (90.30%), Postives = 313/330 (94.85%), Query Frame = 1
BLAST of Spo19249.1 vs. NCBI nr
Match: gi|902202894|gb|KNA14409.1| (hypothetical protein SOVF_107750 [Spinacia oleracea]) HSP 1 Score: 530.0 bits (1364), Expect = 2.900e-147 Identity = 278/323 (86.07%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo19249.1 vs. NCBI nr
Match: gi|359493159|ref|XP_003634527.1| (PREDICTED: UDP-galactose transporter 2 [Vitis vinifera]) HSP 1 Score: 521.2 bits (1341), Expect = 1.300e-144 Identity = 271/323 (83.90%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo19249.1 vs. NCBI nr
Match: gi|661884905|emb|CDP11437.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 520.4 bits (1339), Expect = 2.300e-144 Identity = 271/332 (81.63%), Postives = 297/332 (89.46%), Query Frame = 1
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZX1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010240 PE=4 SV=1) HSP 1 Score: 624.0 bits (1608), Expect = 1.000e-175 Identity = 328/329 (99.70%), Postives = 328/329 (99.70%), Query Frame = 1
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEM1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g117050 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 2.000e-158 Identity = 298/330 (90.30%), Postives = 313/330 (94.85%), Query Frame = 1
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R638_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107750 PE=4 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 2.000e-147 Identity = 278/323 (86.07%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Match: D7SRG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00080 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 9.400e-145 Identity = 271/323 (83.90%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Match: A0A068USZ0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033690001 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 1.600e-144 Identity = 271/332 (81.63%), Postives = 297/332 (89.46%), Query Frame = 1
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Match: UGAL2_ARATH (UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.300e-74 Identity = 161/314 (51.27%), Postives = 211/314 (67.20%), Query Frame = 1
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Match: Y1689_ARATH (Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 6.200e-49 Identity = 112/281 (39.86%), Postives = 177/281 (62.99%), Query Frame = 1
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Match: S35E3_MOUSE (Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.000e-22 Identity = 87/297 (29.29%), Postives = 158/297 (53.20%), Query Frame = 1
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Match: S35E3_BOVIN (Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.300e-22 Identity = 88/297 (29.63%), Postives = 156/297 (52.53%), Query Frame = 1
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Match: S35E3_HUMAN (Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.400e-21 Identity = 83/283 (29.33%), Postives = 148/283 (52.30%), Query Frame = 1
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Match: AT1G34020.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 509.6 bits (1311), Expect = 1.400e-144 Identity = 264/320 (82.50%), Postives = 290/320 (90.62%), Query Frame = 1
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Match: AT4G09810.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 501.9 bits (1291), Expect = 3.000e-142 Identity = 256/320 (80.00%), Postives = 289/320 (90.31%), Query Frame = 1
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Match: AT4G39390.1 (nucleotide sugar transporter-KT 1) HSP 1 Score: 485.7 bits (1249), Expect = 2.200e-137 Identity = 251/331 (75.83%), Postives = 285/331 (86.10%), Query Frame = 1
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Match: AT1G21070.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 283.5 bits (724), Expect = 1.700e-76 Identity = 160/320 (50.00%), Postives = 215/320 (67.19%), Query Frame = 1
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Match: AT1G76670.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 279.6 bits (714), Expect = 2.400e-75 Identity = 161/314 (51.27%), Postives = 211/314 (67.20%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19249.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19249.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19249.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19249.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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