Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGATGTTCTCTTTAATATAAAAAAAAACAAGAAAAAAAAAATACACCGTTCTCATTTCCGAAACCGCTACCAATATAAAAGTGGAACTGTTAAAAAAATCGGCCTGTGATAATATTAGCATTCTCCCACTCGTCGCAGTTCAGTCCGCCGGCGGCGCAATCGTGCTCGATTTCTGTACTCTTGTACTGTGCAACTTATCTGGTAAATGTTCATATTTCTCTTCATTACTAATTCTATATCTATCTCCTCTAATTCACTCTCTTCATTTCCCCTTAAATTTAATTGCTTTACATGCTGTCCTGCCCATGAATTGAAGCTTGAACAGTTATCTTACATTGATTATGTAGAAAGCTTTAATTTTCTTATAACATTGTTTGGATTTCTCGCATTTAATTATGGACCTAATTGGGGGAAAAAACCCAGTAAATTATTGATGAATTTCTGAGATTTTGATGATTTTACACCTTAAATATATTGGCACTTTGGCAGTGAAGTAGTTATAACGTTATAACTCTTATAAGAGTGTACGCGAGTAGAAAGAAGTTAATTGTGTGAATTTGCAATTTTAGGGTTTATTATAGTGCTATCGATTTCTGGGTAAAAATGAGCAAGAAGAGAATGATAGCCCTTGGTTTTGAAGGATCAGCTAATAAGATTGGTGTGGGTGTTGTAACCCTAGATGGAACCATCTTATCGAACCCACGACACACCTACATTACCCCACCAGGACACGGGTTTCTTCCTCGAGAAACCGCCCACCATCACCTTGAACATGTCCTGCCCCTTGTGAAATCTGCTCTAAAGATTGCTGGAATAACCCCAGATGAAATTGACTGCCTTTGTTACACCAAAGGCCCCGGGATGGGAGCTCCATTGCAAGTCTCTGCGGTTGTTGTGAGGGTTCTTTCGCAGCTGTGGAAGAAGCCTATTGTTGGTGTTAATCACTGTGTTGCTCATATTGAGATGGGGAGGATTGTTACCGGGGCGGTTGATCCTGTTGTGCTGTATGTTAGTGGGGGTAATACCCAAGTGATTGCGTACAGTGAGGGGCGCTATCGGATTTTTGGGGAGACCATTGATATTGCTGTTGGGAATTGCTTGGATCGGTTTGCTCGAGTTTTGACACTTTCGAATGATCCAAGTCCTGGATATAATATTGAACAGGTAGAACAAGCCCCTTTTATCAATTATTTTCTCTTGATATTGTTGTTTCCTTTTCTTTGTTTTTCTCAGAGTTATTTAGAAGTATTTTAGCCGCTTTATCAGTGATCAAAATATTAATCTTGTCATTTCGTAGGTGAGTTTCTCAGTAGATAAAAATCGTATTACAGCATTACACTATTCATGGACATTGTAAGGTCATCTAGGAGGAGGACGGATTTCTTTTGGTAGATGGGTAACCAGTTGTTTAGAACTTTGAGTTTTCAGTATTGGTGTAGACTTTGAGTTTTGCATTCCCATTTTGTTATTGCGTTGCTCAACTTTAGGTGTTTACTTTGTTTGATGCAAAGAACATTTCCTAGCTACTTTCATACATCATACCACAATAAAATACGCCATAGAAGAGTTTAGGCGGTAAGTAAAGAAAACTGTACTTGCATATTCTGTGGACGTGTGATTTCCGCAACTTGTGGTGTGTTTGGTTAGAAATTTAGAACGGCACGATTGTATAGTCTATCCGTTATGCCTGCCTTTCTCATCTTTTTATTGTACCTTTTTATTTCATAACTAAATGAACACCCTCTGTTAGTTTTCTGCACTGTCTATTTCTTTCCTTTTTGTCTTGGGTTGAGGGCGAGGTTGCATACTAGTACACATCTCTGAATATGATAAACAGAGGGATACATACTAATATACTGGATAGCAGCGGACATTTCTCTCTGCTGTATAATTGTAATTTGTGGATATGATGTCCTGTTAATTTTGCTTGTTCTGTTGATGACCAGCTTGCTAAGAAAGGTGAGAAATTCATAGATCTTCCATATGCCGTAAAGGGAATGGATGTTTCATTCAGTGGCATATTGAGCTTCATTGAAACCACAGCCGAGGAGAAGCTTAAAAGCAATGAGTGCACACCCGCCGACTTGTGTTACTCCCTGCAAGTACGTACTTATTTTATGTCTGCTCTGATAAAAACACAAAAAAAGAAGAAAAAACTTGTTATATCTACAACTATTGAAATCTGTGAATTAGTTTCTTTCTATTTAATTGTTGGTGTTGTAGGAAACTCTCTTTGCCATGCTTGTTGAAATAACAGAAAGAGCGATGGCTCATTGTGATGCAAAAGACGTTCTTATCGTTGGGGGTGTCGGTTGCAATGAGAGATTGCAAGAAATGATGAGGATAATGTGTTCTGAGAGAGGTGGACGGTTATTTGCCACTGACGACAGGTATTGCATTGACAACGGTGCCATGATTGCATACACGGGTCTTCTTGCTTATGCCCATGGATTATCTACCCCACTCGAGGAATCAACATTTACTCAGAGATTTCGAACTGATGAAGTACATGCAATTTGGAGGGAGAAAGAACACGGAAAGTGAGGCAAAAAAACCATGATTGTTTAGGTACTCAATGCTCTGAACCAGGTATTTCATTATATCAATACTTAATTTATTTTCTCCTTGACAAACAGTTGAACTTGTAACATAGAAATTTCTATAGAATAGGAAGAATATTGCAGTGTTGGAATTTGTATAATCCAACCATATTAATCCCAGTTAAGCAGGTTCATACATTTGTCGAATTAGCTTTCGAAGTAATTTCCCAATTTCTTGTTCTGTTTTGTCGTTGGTTAGCGAGTTCATACGTCTGTCGAATTAGCTTTCAAAGTAATTTCCCTGTTTTTTGTTCTGTTTTGCCGC CTGATGTTCTCTTTAATATAAAAAAAAACAAGAAAAAAAAAATACACCGTTCTCATTTCCGAAACCGCTACCAATATAAAAGTGGAACTGTTAAAAAAATCGGCCTGTGATAATATTAGCATTCTCCCACTCGTCGCAGTTCAGTCCGCCGGCGGCGCAATCGTGCTCGATTTCTGTACTCTTGTACTGTGCAACTTATCTGGGTTTATTATAGTGCTATCGATTTCTGGGTAAAAATGAGCAAGAAGAGAATGATAGCCCTTGGTTTTGAAGGATCAGCTAATAAGATTGGTGTGGGTGTTGTAACCCTAGATGGAACCATCTTATCGAACCCACGACACACCTACATTACCCCACCAGGACACGGGTTTCTTCCTCGAGAAACCGCCCACCATCACCTTGAACATGTCCTGCCCCTTGTGAAATCTGCTCTAAAGATTGCTGGAATAACCCCAGATGAAATTGACTGCCTTTGTTACACCAAAGGCCCCGGGATGGGAGCTCCATTGCAAGTCTCTGCGGTTGTTGTGAGGGTTCTTTCGCAGCTGTGGAAGAAGCCTATTGTTGGTGTTAATCACTGTGTTGCTCATATTGAGATGGGGAGGATTGTTACCGGGGCGGTTGATCCTGTTGTGCTGTATGTTAGTGGGGGTAATACCCAAGTGATTGCGTACAGTGAGGGGCGCTATCGGATTTTTGGGGAGACCATTGATATTGCTGTTGGGAATTGCTTGGATCGGTTTGCTCGAGTTTTGACACTTTCGAATGATCCAAGTCCTGGATATAATATTGAACAGCTTGCTAAGAAAGGTGAGAAATTCATAGATCTTCCATATGCCGTAAAGGGAATGGATGTTTCATTCAGTGGCATATTGAGCTTCATTGAAACCACAGCCGAGGAGAAGCTTAAAAGCAATGAGTGCACACCCGCCGACTTGTGTTACTCCCTGCAAGAAACTCTCTTTGCCATGCTTGTTGAAATAACAGAAAGAGCGATGGCTCATTGTGATGCAAAAGACGTTCTTATCGTTGGGGGTGTCGGTTGCAATGAGAGATTGCAAGAAATGATGAGGATAATGTGTTCTGAGAGAGGTGGACGGTTATTTGCCACTGACGACAGGTATTGCATTGACAACGGTGCCATGATTGCATACACGGGTCTTCTTGCTTATGCCCATGGATTATCTACCCCACTCGAGGAATCAACATTTACTCAGAGATTTCGAACTGATGAAGTACATGCAATTTGGAGGGAGAAAGAACACGGAAAGTGAGGCAAAAAAACCATGATTGTTTAGGTACTCAATGCTCTGAACCAGGTATTTCATTATATCAATACTTAATTTATTTTCTCCTTGACAAACAGTTGAACTTGTAACATAGAAATTTCTATAGAATAGGAAGAATATTGCAGTGTTGGAATTTGTATAATCCAACCATATTAATCCCAGTTAAGCAGGTTCATACATTTGTCGAATTAGCTTTCGAAGTAATTTCCCAATTTCTTGTTCTGTTTTGTCGTTGGTTAGCGAGTTCATACGTCTGTCGAATTAGCTTTCAAAGTAATTTCCCTGTTTTTTGTTCTGTTTTGCCGC ATGAGCAAGAAGAGAATGATAGCCCTTGGTTTTGAAGGATCAGCTAATAAGATTGGTGTGGGTGTTGTAACCCTAGATGGAACCATCTTATCGAACCCACGACACACCTACATTACCCCACCAGGACACGGGTTTCTTCCTCGAGAAACCGCCCACCATCACCTTGAACATGTCCTGCCCCTTGTGAAATCTGCTCTAAAGATTGCTGGAATAACCCCAGATGAAATTGACTGCCTTTGTTACACCAAAGGCCCCGGGATGGGAGCTCCATTGCAAGTCTCTGCGGTTGTTGTGAGGGTTCTTTCGCAGCTGTGGAAGAAGCCTATTGTTGGTGTTAATCACTGTGTTGCTCATATTGAGATGGGGAGGATTGTTACCGGGGCGGTTGATCCTGTTGTGCTGTATGTTAGTGGGGGTAATACCCAAGTGATTGCGTACAGTGAGGGGCGCTATCGGATTTTTGGGGAGACCATTGATATTGCTGTTGGGAATTGCTTGGATCGGTTTGCTCGAGTTTTGACACTTTCGAATGATCCAAGTCCTGGATATAATATTGAACAGCTTGCTAAGAAAGGTGAGAAATTCATAGATCTTCCATATGCCGTAAAGGGAATGGATGTTTCATTCAGTGGCATATTGAGCTTCATTGAAACCACAGCCGAGGAGAAGCTTAAAAGCAATGAGTGCACACCCGCCGACTTGTGTTACTCCCTGCAAGAAACTCTCTTTGCCATGCTTGTTGAAATAACAGAAAGAGCGATGGCTCATTGTGATGCAAAAGACGTTCTTATCGTTGGGGGTGTCGGTTGCAATGAGAGATTGCAAGAAATGATGAGGATAATGTGTTCTGAGAGAGGTGGACGGTTATTTGCCACTGACGACAGGTATTGCATTGACAACGGTGCCATGATTGCATACACGGGTCTTCTTGCTTATGCCCATGGATTATCTACCCCACTCGAGGAATCAACATTTACTCAGAGATTTCGAACTGATGAAGTACATGCAATTTGGAGGGAGAAAGAACACGGAAAGTGA MSKKRMIALGFEGSANKIGVGVVTLDGTILSNPRHTYITPPGHGFLPRETAHHHLEHVLPLVKSALKIAGITPDEIDCLCYTKGPGMGAPLQVSAVVVRVLSQLWKKPIVGVNHCVAHIEMGRIVTGAVDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFIDLPYAVKGMDVSFSGILSFIETTAEEKLKSNECTPADLCYSLQETLFAMLVEITERAMAHCDAKDVLIVGGVGCNERLQEMMRIMCSERGGRLFATDDRYCIDNGAMIAYTGLLAYAHGLSTPLEESTFTQRFRTDEVHAIWREKEHGK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo19251.1 vs. NCBI nr
Match: gi|902238097|gb|KNA25043.1| (hypothetical protein SOVF_010210 [Spinacia oleracea]) HSP 1 Score: 702.2 bits (1811), Expect = 4.500e-199 Identity = 344/345 (99.71%), Postives = 344/345 (99.71%), Query Frame = 1
BLAST of Spo19251.1 vs. NCBI nr
Match: gi|731323102|ref|XP_010672249.1| (PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 681.4 bits (1757), Expect = 8.200e-193 Identity = 333/339 (98.23%), Postives = 336/339 (99.12%), Query Frame = 1
BLAST of Spo19251.1 vs. NCBI nr
Match: gi|823163219|ref|XP_012481546.1| (PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Gossypium raimondii]) HSP 1 Score: 659.4 bits (1700), Expect = 3.300e-186 Identity = 319/340 (93.82%), Postives = 330/340 (97.06%), Query Frame = 1
BLAST of Spo19251.1 vs. NCBI nr
Match: gi|568833223|ref|XP_006470809.1| (PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Citrus sinensis]) HSP 1 Score: 656.8 bits (1693), Expect = 2.200e-185 Identity = 318/339 (93.81%), Postives = 327/339 (96.46%), Query Frame = 1
BLAST of Spo19251.1 vs. NCBI nr
Match: gi|848877325|ref|XP_012839099.1| (PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 [Erythranthe guttata]) HSP 1 Score: 656.0 bits (1691), Expect = 3.700e-185 Identity = 316/341 (92.67%), Postives = 330/341 (96.77%), Query Frame = 1
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S001_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010210 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 3.100e-199 Identity = 344/345 (99.71%), Postives = 344/345 (99.71%), Query Frame = 1
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FIU8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057710 PE=4 SV=1) HSP 1 Score: 681.4 bits (1757), Expect = 5.700e-193 Identity = 333/339 (98.23%), Postives = 336/339 (99.12%), Query Frame = 1
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PLB4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G016800 PE=4 SV=1) HSP 1 Score: 659.4 bits (1700), Expect = 2.300e-186 Identity = 319/340 (93.82%), Postives = 330/340 (97.06%), Query Frame = 1
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Match: A0A022RCU7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009015mg PE=4 SV=1) HSP 1 Score: 656.0 bits (1691), Expect = 2.600e-185 Identity = 316/341 (92.67%), Postives = 330/341 (96.77%), Query Frame = 1
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Match: V4SV63_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001634mg PE=4 SV=1) HSP 1 Score: 656.0 bits (1691), Expect = 2.600e-185 Identity = 317/342 (92.69%), Postives = 327/342 (95.61%), Query Frame = 1
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Match: OSGEP_NEMVE (Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Nematostella vectensis GN=osgep PE=3 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 5.900e-143 Identity = 237/332 (71.39%), Postives = 278/332 (83.73%), Query Frame = 1
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Match: OSGEP_RAT (Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus GN=Osgep PE=2 SV=2) HSP 1 Score: 500.7 bits (1288), Expect = 1.200e-140 Identity = 237/332 (71.39%), Postives = 276/332 (83.13%), Query Frame = 1
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Match: OSGEP_BOVIN (Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Bos taurus GN=OSGEP PE=2 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.800e-140 Identity = 237/332 (71.39%), Postives = 274/332 (82.53%), Query Frame = 1
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Match: OSGEP_HUMAN (Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Homo sapiens GN=OSGEP PE=1 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 4.000e-139 Identity = 236/332 (71.08%), Postives = 271/332 (81.63%), Query Frame = 1
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Match: OSGEP_MOUSE (Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus GN=Osgep PE=1 SV=2) HSP 1 Score: 495.4 bits (1274), Expect = 5.200e-139 Identity = 234/332 (70.48%), Postives = 275/332 (82.83%), Query Frame = 1
BLAST of Spo19251.1 vs. TAIR (Arabidopsis)
Match: AT4G22720.1 (Actin-like ATPase superfamily protein) HSP 1 Score: 647.9 bits (1670), Expect = 3.500e-186 Identity = 307/340 (90.29%), Postives = 329/340 (96.76%), Query Frame = 1
BLAST of Spo19251.1 vs. TAIR (Arabidopsis)
Match: AT2G45270.1 (glycoprotease 1) HSP 1 Score: 117.9 bits (294), Expect = 1.300e-26 Identity = 96/345 (27.83%), Postives = 156/345 (45.22%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19251.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19251.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19251.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19251.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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