Spo19312.1 (mRNA) | SpinachBase

Overview


Name	Spo19312.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	CASP-like protein
Location	Super_scaffold_71 : 1602609 .. 1606432 (+)
Sequence length	1132

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGAAAAAGAAGTCTAAAGTACCCAAAGTACTCTCCTATTTATTCGTTCTCTGAAAATATCCAACAATATTTTTCAAATAATCAGTTTAATCATCAAAGACAATTCAGTGGAATGAGTCACCCGGCAGTGCACCCGGTGGACGTGCTGCTGGAACCGCCAGCTGAAAACGCGGCCGCACCACCAGGTGTGAGAATGGGGTACATCAAAGGGTTGCCTGGAACCAAATTGGGCCTTGTTTTGCGTGCGTCTCAAATCTTCTTCGCCACTGTTGCTGTTGTTGTTATGAGCACCACCAGTGATTTCTCCTCCGTCTTAGTTTTCTGGTGACTATTTTAATAAATTTTCTTCTGATTATTATTGCTAATTTGATGTTAATTTACTCCACATTTGATTTACTTTTGCTGATTAAGTAATTGGTTGATTTGCATGTACTGGTATTGTGGGGGAGTTTGTGGAATTGTGGGGATGGGTAGAGGAAGGATTGAGAAATCAGCTTTCAACCACTGTTGTTGCGTGATGAATGTTTCATATTGCGATGGACTCTTAAAGCAAGTCCCTTTCATGTTTTCTCATGGAAATTTTTTATATTGTTTCCAATTCTGCTATTTGGGTTGAGGTTTATCCTGTAATTATAGGTGGTTTTATTTTAATGGTTTTTTCATGAAATGCATCGAGGTTAATGGTTTATACTTTATAGGAGGCGTCTATTGCTGACTCGATAAAAACAAATTTTTTTTTTTTTTAACGTATTATTGACCCTGCTTCCATCTCCAATTCTCCATCTCTTTTGCTTCTTCTTTCCCAAAAATTTTAAATGGTGCTTGATTGTATATTTGCAAACATCATATTTTTTGTTTTAAAAAAAACACCGCAAACCTCAGTAACTCCATTAGAACAACCATACCTAACCTCATTACTCGAATAAATTGTTTTTCTATGATGCTGCTTATACTTAGTTAACGCTTCAGTTCTCAAAATTGAAAGCCCAACAATTTTCTTCAAATCTTCTTCGTAACAAATTATATCATAAAAATAAAGCCCAAGACATCCTACTCCGTTTTAGAGGAGAGAGAACAAAGAAGAATTTGAGTAGATTTGTGATGATAACTGATGAAGGGCAGAGCAAGAGGAGAGAGGAAATCTATGAAGGAAGAAGAAACTCATAAAGGATTATAAGAGAGAGGAGAGAATGACGCAGCTTTTCCAAAGAAAACCAAAAAACAGAAACCACTTTTAGAGCATCAATTGTAGGCTCACTCTTAATTTGCCCCCTCTTAGTCTCTCTCCTTGTACACCCCATCACCCCTTCTTAATAAGAGTTAGCTACTAAAAACACCAAGAAATAGATTATCTCTTAAACCTACCTCTTATATAGTTATTTAATATTTTTAATTTTATTTTTAATATAAAAAGCAACCAAAATACTTCAGATTCTTCCACCTCACCCCACTCTTATTTTTAAGAGTTAGCTCTTATTTTGTAAGAGGTAACTCTTAAATTTTCTCTCTTTTAACAGTGGGCTAAGAGTAAGCCACAATTGATGCTCTTAGAGCATCAATTATAAGGCTAACTCTTATTTACCCACTCTTAATCTCTCTCCTCCTCCACACCATCACCATCTTTTATTAAGAGTTATCTACCAAAAATCCAAGAAATAGGCCACCTCTTATACACTATCTGTTACATACAATTTCACATATTTTCTGTTTTTTTTTTAAAGAAATATAAGTAAAAAACATACATAAAATACACCTCATACCCCCTCTTATTTCTAAGAGCTACCTCTTATTTAGAGGATGTCTCAATCAAACTCTAAATAAGAGGTAGCTAAGAGTTACATTAATTATTTTAAGAGCTAGCTCTTAGACATTCTCTCTCCTTAAGAAGGGGCTAAGAGTAAGCTACAATTGATGCTCTTAGTGGTTTTTGATTTTCCGTTGTAGTTTTATGGAAATGGAAGGATATTTGATTGTTTCAAAAGCTTCACCCGAATGCCGTTTTGTTTTATTTTTGATGAAAAAAACAGAAAAACCATAAACGGCAACAGTCCCGAACGGACCCTTAATTTGTGAAATGACTGTTTGTCACATTGTCATCCCTTTACACCTTAAGGCTTCGTCTCTTAAGTAGAAAATGCCATGTAATGCTACTGTTGGAAACTTGGAGTAATTGTGAAATTACATTGTTACACTTGGTGGGAAAAGGACGAATGTAAGGAGTAGAGACGTTGAGTGAATCCAACCGATGAAGTTGTGTGCTTATTACAGTAACTAACTCTGTTACAAATAATCCATTAAAGATTTTATCGCTTTCGTATATATTACTTAGTTTACAGTAAATTTTGCAGTAAACTTCAGAGCCTTGATTGACGTGACTTCACTCATGTATGGGTTTTTCATCTTCTACATTAATTAATATATGACACAGAGTATACCTGTACTCACAGCTTGCTTGTTGCATTTTCTGGACTTCAAATCTTTTGGAGCCTTGCAATGGCGTTGACTAATATTCGTGCAATATCATTGAAACGCAAATTTCAGAATCGCCCAGCTGTCATTATCTTTTTTGCTGGTGATATGGTAAGATAATTTTCTATGCCAATGTTTTGTGATTTTGCATGCCTTCTTGTTTTCTGTTTTTTTACTAGTGTCAGAATTTTCTAAGAGAACTTTGTGTCCTTTATCTACTGTAGTTGATGTGGGCTTGGTGTATCTCTACAATGGGCTCTAAGACAAGGGTGATCTGACTCAAGCTTACCCCCGAAATTCATATTGGCGCAGGGCTCATCTGTTGGCCCAAACCTCATCACTTAAGCCTTGGAGGACCACTCCTTGATAAAGGTCCAAGTTATCCATGACTAGGCCCAAGTCTAAAGAGCCCATTAGGCTCTACTCAACACTCCCCCCTGGACACGTGTTCCAATCCCCGAAGACACCTAATCATGCAGCTAGGGTTATGAGATCAATTCCCAAAGAACCTTAGCCCTATAAATAGTTCAGTTCCCAAGGTAAAAGGGACATTCAATTCACTATCACCTACCTTAAACTATCTTTGCTTTGCCTTCTCTCTGCAAATTATTTCTCTCTCTAGCCAATACTTACTTAGGCATCAGAGTGAATATTCTTACGGGAATATTCTTGTTTTGCAGGATGAAGGAAGATCGTGCTAGCGCATACTTGATACCTCCGGGGAACGCATGACACGTCATCACTACAAAAGAACCCACAACATTTGGCGCAGTCTGTGGGGAGGTATAGTCTTAGTTTAAAATGGCGCAAGGCGCAAGGCGCAGGCGCGCGCCTTTCGGATACAAGGCGCACAAAAATTCTAAAAAAGCTTGAAATTCAATGTAGAACAAAACTAACATATTTTATACTCAAAACAACATGGTAATCATATTAGTAATGCATAAATGGACGAAAAAAAGCACAATTAGTTGCGAACATACTGCTAAACGACAAAGTAATTAGCAGAAAGTAGCTTAAAGTTCCACACAAACCACACAATCAACATAAAATAAATAAGTAGAAAGAAAAGCAAACACATTAGTTCTTCAAGCTTGATAGTAAGCATCCTAAAATGCTAGTACTCTATGTCATCATCGTCATACACATCATCCTCTACTTGATAATCCTCATCTCCCGAGTCTCCACTTATGTCCTCTTCTATCTCATCATCATCATCATCCAACAACACAACTCTAGGAGTGGAGCTACTAGCAATCCCTTTTCCTTTATCAACTCTTGATGATGATGCTCTAGTGGCATAGATAGGATCATTAGCTCCGGAGGCTCTATCAACCGCACCCCATGTCAAATCCTC

mRNA sequence

AGTGAAAAAGAAGTCTAAAGTACCCAAAGTACTCTCCTATTTATTCGTTCTCTGAAAATATCCAACAATATTTTTCAAATAATCAGTTTAATCATCAAAGACAATTCAGTGGAATGAGTCACCCGGCAGTGCACCCGGTGGACGTGCTGCTGGAACCGCCAGCTGAAAACGCGGCCGCACCACCAGGTGTGAGAATGGGGTACATCAAAGGGTTGCCTGGAACCAAATTGGGCCTTGTTTTGCGTGCGTCTCAAATCTTCTTCGCCACTGTTGCTGTTGTTGTTATGAGCACCACCAGTGATTTCTCCTCCGTCTTAGTTTTCTGCTTGCTTGTTGCATTTTCTGGACTTCAAATCTTTTGGAGCCTTGCAATGGCGTTGACTAATATTCGTGCAATATCATTGAAACGCAAATTTCAGAATCGCCCAGCTGTCATTATCTTTTTTGCTGGTGATATGGATGAAGGAAGATCGTGCTAGCGCATACTTGATACCTCCGGGGAACGCATGACACGTCATCACTACAAAAGAACCCACAACATTTGGCGCAGTCTGTGGGGAGGTATAGTCTTAGTTTAAAATGGCGCAAGGCGCAAGGCGCAGGCGCGCGCCTTTCGGATACAAGGCGCACAAAAATTCTAAAAAAGCTTGAAATTCAATGTAGAACAAAACTAACATATTTTATACTCAAAACAACATGGTAATCATATTAGTAATGCATAAATGGACGAAAAAAAGCACAATTAGTTGCGAACATACTGCTAAACGACAAAGTAATTAGCAGAAAGTAGCTTAAAGTTCCACACAAACCACACAATCAACATAAAATAAATAAGTAGAAAGAAAAGCAAACACATTAGTTCTTCAAGCTTGATAGTAAGCATCCTAAAATGCTAGTACTCTATGTCATCATCGTCATACACATCATCCTCTACTTGATAATCCTCATCTCCCGAGTCTCCACTTATGTCCTCTTCTATCTCATCATCATCATCATCCAACAACACAACTCTAGGAGTGGAGCTACTAGCAATCCCTTTTCCTTTATCAACTCTTGATGATGATGCTCTAGTGGCATAGATAGGATCATTAGCTCCGGAGGCTCTATCAACCGCACCCCATGTCAAATCCTC

Coding sequence (CDS)

ATGAGTCACCCGGCAGTGCACCCGGTGGACGTGCTGCTGGAACCGCCAGCTGAAAACGCGGCCGCACCACCAGGTGTGAGAATGGGGTACATCAAAGGGTTGCCTGGAACCAAATTGGGCCTTGTTTTGCGTGCGTCTCAAATCTTCTTCGCCACTGTTGCTGTTGTTGTTATGAGCACCACCAGTGATTTCTCCTCCGTCTTAGTTTTCTGCTTGCTTGTTGCATTTTCTGGACTTCAAATCTTTTGGAGCCTTGCAATGGCGTTGACTAATATTCGTGCAATATCATTGAAACGCAAATTTCAGAATCGCCCAGCTGTCATTATCTTTTTTGCTGGTGATATGGATGAAGGAAGATCGTGCTAG

Protein sequence

MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMSTTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDMDEGRSC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19312	Spo19312	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19312.1	Spo19312.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19312.1.exon.1	Spo19312.1.exon.1	exon
Spo19312.1.exon.2	Spo19312.1.exon.2	exon
Spo19312.1.exon.3	Spo19312.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19312.1.utr5p.1	Spo19312.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19312.1.CDS.1	Spo19312.1.CDS.1	CDS
Spo19312.1.CDS.2	Spo19312.1.CDS.2	CDS
Spo19312.1.CDS.3	Spo19312.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19312.1.utr3p.1	Spo19312.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo19312.1 vs. NCBI nr
Match: gi|902194930|gb|KNA12712.1| (hypothetical protein SOVF_123480 isoform B [Spinacia oleracea])

HSP 1 Score: 218.0 bits (554), Expect = 9.000e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST
Sbjct: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM
Sbjct: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 115

[Close]

BLAST of Spo19312.1 vs. NCBI nr
Match: gi|902194929|gb|KNA12711.1| (hypothetical protein SOVF_123480 isoform A [Spinacia oleracea])

HSP 1 Score: 218.0 bits (554), Expect = 9.000e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST
Sbjct: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM
Sbjct: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 115

[Close]

BLAST of Spo19312.1 vs. NCBI nr
Match: gi|902209039|gb|KNA16084.1| (hypothetical protein SOVF_092450 [Spinacia oleracea])

HSP 1 Score: 125.9 bits (315), Expect = 4.600e-26
Identity = 73/117 (62.39%), Postives = 86/117 (73.50%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAP--PGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVM 60
           MSHPAVHPVDVL EPPA+NAAA   P VRM    G+ G+  GL LR +Q FFA  A +VM
Sbjct: 1   MSHPAVHPVDVLPEPPADNAAAAAAPRVRMKDFPGVAGSPCGLFLRLAQSFFAIGACLVM 60

Query: 61  STTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           +TTSDF SV  FC LVA SGLQI WSL++ + +I AIS+KRKF  R A+I+F AGDM
Sbjct: 61  ATTSDFPSVSAFCFLVAASGLQILWSLSLVVLDIYAISVKRKFCKRGALILFTAGDM 117

[Close]

BLAST of Spo19312.1 vs. NCBI nr
Match: gi|297826093|ref|XP_002880929.1| (hypothetical protein ARALYDRAFT_481668 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 107.5 bits (267), Expect = 1.700e-20
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           +SH +VHPV+   +PPA     PP VRM  ++G+PGT LGL LR  Q  FA  A+ VM+T
Sbjct: 3   VSHASVHPVE---DPPATEVDNPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMAT 62

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           TSDF SV  FC LVA +GLQ  WSLA+A+ ++ AI +KR  QNR  V +F  GD
Sbjct: 63  TSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGD 113

[Close]

BLAST of Spo19312.1 vs. NCBI nr
Match: gi|567209593|ref|XP_006409862.1| (hypothetical protein EUTSA_v10017309mg [Eutrema salsugineum])

HSP 1 Score: 105.5 bits (262), Expect = 6.500e-20
Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           +SH +VHPV+   +PPA     PP VRM  I+G+PGT LGL LR  Q  FA  A+ VM++
Sbjct: 3   VSHASVHPVE---DPPATEVDNPPRVRMDDIEGMPGTLLGLALRFFQFLFAAAALCVMAS 62

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           TSDF SV  FC LVA +GLQ  WSLA+ + ++ AI +KR  QNR  V +F  GD
Sbjct: 63  TSDFPSVTAFCYLVAATGLQSLWSLALVIVDVYAIMVKRSLQNRRLVSLFAIGD 113

[Close]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZM5_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_123480 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.300e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST
Sbjct: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM
Sbjct: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 115

[Close]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1P6_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_123480 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.300e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST
Sbjct: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM
Sbjct: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 115

[Close]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAQ2_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_092450 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-26
Identity = 73/117 (62.39%), Postives = 86/117 (73.50%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAP--PGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVM 60
           MSHPAVHPVDVL EPPA+NAAA   P VRM    G+ G+  GL LR +Q FFA  A +VM
Sbjct: 1   MSHPAVHPVDVLPEPPADNAAAAAAPRVRMKDFPGVAGSPCGLFLRLAQSFFAIGACLVM 60

Query: 61  STTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGDM 116
           +TTSDF SV  FC LVA SGLQI WSL++ + +I AIS+KRKF  R A+I+F AGDM
Sbjct: 61  ATTSDFPSVSAFCFLVAASGLQILWSLSLVVLDIYAISVKRKFCKRGALILFTAGDM 117

[Close]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Match: D7LHN1_ARALL (CASP-like protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481668 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.200e-20
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           +SH +VHPV+   +PPA     PP VRM  ++G+PGT LGL LR  Q  FA  A+ VM+T
Sbjct: 3   VSHASVHPVE---DPPATEVDNPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMAT 62

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           TSDF SV  FC LVA +GLQ  WSLA+A+ ++ AI +KR  QNR  V +F  GD
Sbjct: 63  TSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGD 113

[Close]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Match: V4LL75_EUTSA (CASP-like protein OS=Eutrema salsugineum GN=EUTSA_v10017309mg PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.500e-20
Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 60
           +SH +VHPV+   +PPA     PP VRM  I+G+PGT LGL LR  Q  FA  A+ VM++
Sbjct: 3   VSHASVHPVE---DPPATEVDNPPRVRMDDIEGMPGTLLGLALRFFQFLFAAAALCVMAS 62

Query: 61  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           TSDF SV  FC LVA +GLQ  WSLA+ + ++ AI +KR  QNR  V +F  GD
Sbjct: 63  TSDFPSVTAFCYLVAATGLQSLWSLALVIVDVYAIMVKRSLQNRRLVSLFAIGD 113

[Close]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Match: CSPL6_ARATH (CASP-like protein 5A2 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.700e-21
Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAA--PPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVM 60
           +SH +VHPV+   +PPA       PP VRM  ++G+PGT LGL LR  Q  FA  A+ VM
Sbjct: 3   VSHASVHPVE---DPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 62

Query: 61  STTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           ++TSDF SV  FC LVA +GLQ  WSLA+A+ ++ AI +KR  QNR  V +F  GD
Sbjct: 63  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGD 115

[Close]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Match: CSPL1_BRADI (CASP-like protein 5A1 OS=Brachypodium distachyon PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.600e-18
Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 1


		  
Query: 2   SHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMSTT 61
           S PAVHPV+    PP +    P GV M  + G+PGT  GL LR +Q  FA VA+ VM++T
Sbjct: 4   SRPAVHPVEA--PPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAST 63

Query: 62  SDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           SDF SV  FC LVA + +Q  WS ++A+ +I A+ +KR  +NR AV +F  GD
Sbjct: 64  SDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGD 114

[Close]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Match: CSPLV_ORYSJ (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.600e-18
Identity = 55/113 (48.67%), Postives = 73/113 (64.60%), Query Frame = 1


		  
Query: 2   SHPAVHPVDVLLEPPAENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMSTT 61
           S PAVHPV+    PP + A  P GV M  + G+PGT  GL LR +Q  FA VA+ VM++T
Sbjct: 4   SRPAVHPVEA--PPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAST 63

Query: 62  SDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           +DF SV  FC LVA + LQ  WS ++A+ +I A+ +KR  +NR AV +F  GD
Sbjct: 64  NDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGD 114

[Close]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Match: CSPLK_MAIZE (CASP-like protein 5A3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.900e-18
Identity = 59/123 (47.97%), Postives = 71/123 (57.72%), Query Frame = 1


		  
Query: 2   SHPAVHPVDVLLEPPA----------ENAAAPPGVRMGYIKGLPGTKLGLVLRASQIFFA 61
           S PAVHPV+    PPA          E AA P GVRM    G PGT  GL LR +Q FFA
Sbjct: 4   SRPAVHPVEAAPPPPAAAAEGPEAQVEGAAHPRGVRMKDPPGAPGTPAGLGLRLAQAFFA 63

Query: 62  TVAVVVMSTTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFF 115
             A+ VM++T+DF SV  F  LVA + LQ  WSL +A  +I A+ +KR  +N  AV IF 
Sbjct: 64  AAALAVMASTNDFPSVSAFSYLVAAAILQCLWSLLLAFVDIYALLVKRSLRNARAVCIFT 123

[Close]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Match: CSPLO_MAIZE (CASP-like protein 5A1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.900e-17
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 1


		  
Query: 2   SHPAVHPVDVLLEPPAENAAAP-PGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVMST 61
           S P VHP++V    PA     P PGV M  + G+PGT  GL LR  Q+ FA +++ VMS+
Sbjct: 4   SRPVVHPLEVAA--PAHPVQQPAPGVLMKDLPGMPGTPGGLGLRVLQLLFAAISLAVMSS 63

Query: 62  TSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           T+DF+SV  FC L+  + LQ  WSL +A+ +I A+ +KR  QNR AV +F  GD
Sbjct: 64  TADFASVSAFCYLITTTVLQCVWSLTVAIVDIYALLVKRCLQNRRAVTLFSIGD 115

[Close]

BLAST of Spo19312.1 vs. TAIR (Arabidopsis)
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 101.3 bits (251), Expect = 4.300e-22
Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 1


		  
Query: 1   MSHPAVHPVDVLLEPPAENAAA--PPGVRMGYIKGLPGTKLGLVLRASQIFFATVAVVVM 60
           +SH +VHPV+   +PPA       PP VRM  ++G+PGT LGL LR  Q  FA  A+ VM
Sbjct: 3   VSHASVHPVE---DPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 62

Query: 61  STTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNIRAISLKRKFQNRPAVIIFFAGD 115
           ++TSDF SV  FC LVA +GLQ  WSLA+A+ ++ AI +KR  QNR  V +F  GD
Sbjct: 63  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGD 115

[Close]

BLAST of Spo19312.1 vs. TAIR (Arabidopsis)
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 58.5 bits (140), Expect = 3.200e-9
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 1


		  
Query: 31  IKGLPGTKLGLVLRASQIFFATVAVVVMSTTSDFSSVLVFCLLVAFSGLQIFWSLAMALT 90
           I G PGT  GLVLR SQ  FA  ++  M T+  F S   FC L+A  GLQ+ WS  +A+ 
Sbjct: 4   IPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAIL 63

Query: 91  NIRAISLKRKFQNRPAVIIFFAGD 115
           +  A+  K+   +   V +F  GD
Sbjct: 64  DTFALVRKKTLLSPVLVSLFVVGD 87

[Close]

BLAST of Spo19312.1 vs. TAIR (Arabidopsis)
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 55.8 bits (133), Expect = 2.100e-8
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 1


		  
Query: 33  GLPGTKLGLVLRASQIFFATVAVVVMSTTSDFSSVLVFCLLVAFSGLQIFWSLAMALTNI 92
           G PGT  GL+LR  Q   A  ++ VM ++ DFS+   FC LVA  GLQ+ WS  +A  ++
Sbjct: 6   GSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDV 65

Query: 93  RAISLKRKFQNRPAVIIFFAGD 115
            AI  K   ++   + +F  GD
Sbjct: 66  YAIRRKSDLRSPILLSLFTVGD 87

[Close]

BLAST of Spo19312.1 vs. TAIR (Arabidopsis)
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 55.8 bits (133), Expect = 2.100e-8
Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1


		  
Query: 28  MGYIKGLPGTKLGLVLRASQIFFATVAVVVMSTTSDFSSVLVFCLLVAFSGLQIFWSLAM 87
           M  + G PGT  GL+LR  Q   A  ++ VM +  +FS    FC L+A  GLQ+ WS  +
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 88  ALTNIRAISLKRKFQNRPAVIIFFAGD 115
           A  ++ A+  K+  QN   V +F  GD
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGD 87

The following BLAST results are available for this feature:

BLAST of Spo19312.1 vs. NCBI nr
BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
BLAST of Spo19312.1 vs. TAIR (Arabidopsis)

BLAST of Spo19312.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902194930\|gb\|KNA12712.1\|	9.0e-54	100.	hypothetical protein SOVF_1234...	[more]
gi\|902194929\|gb\|KNA12711.1\|	9.0e-54	100.	hypothetical protein SOVF_1234...	[more]
gi\|902209039\|gb\|KNA16084.1\|	4.6e-26	62.3	hypothetical protein SOVF_0924...	[more]
gi\|297826093\|ref\|XP_002880929.1\|	1.7e-20	52.6	hypothetical protein ARALYDRAF...	[more]
gi\|567209593\|ref\|XP_006409862.1\|	6.5e-20	51.7	hypothetical protein EUTSA_v10...	[more]

BLAST of Spo19312.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QZM5_SPIOL	6.3e-54	100.	CASP-like protein OS=Spinacia ...	[more]
A0A0K9R1P6_SPIOL	6.3e-54	100.	CASP-like protein OS=Spinacia ...	[more]
A0A0K9RAQ2_SPIOL	3.2e-26	62.3	CASP-like protein OS=Spinacia ...	[more]
D7LHN1_ARALL	1.2e-20	52.6	CASP-like protein OS=Arabidops...	[more]
V4LL75_EUTSA	4.5e-20	51.7	CASP-like protein OS=Eutrema s...	[more]

BLAST of Spo19312.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CSPL6_ARATH	7.7e-21	50.8	CASP-like protein 5A2 OS=Arabi...	[more]
CSPL1_BRADI	3.6e-18	47.7	CASP-like protein 5A1 OS=Brach...	[more]
CSPLV_ORYSJ	3.6e-18	48.6	CASP-like protein 5A1 OS=Oryza...	[more]
CSPLK_MAIZE	7.9e-18	47.9	CASP-like protein 5A3 OS=Zea m...	[more]
CSPLO_MAIZE	3.9e-17	46.4	CASP-like protein 5A1 OS=Zea m...	[more]

BLAST of Spo19312.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G28370.1	4.3e-22	50.8	Uncharacterised protein family...	[more]
AT3G23200.1	3.2e-9	40.4	Uncharacterised protein family...	[more]
AT5G02060.1	2.1e-8	39.0	Uncharacterised protein family...	[more]
AT3G53850.1	2.1e-8	37.9	Uncharacterised protein family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 35..115 score: 8.9
None	No IPR available	PANTHER	PTHR32021	FAMILY NOT NAMED	coord: 1..114 score: 4.0
None	No IPR available	PANTHER	PTHR32021:SF1	SUBFAMILY NOT NAMED	coord: 1..114 score: 4.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0016020	membrane