Spo19486.1 (mRNA) | SpinachBase

Overview


Name	Spo19486.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	B0403H10-
Location	chr2 : 60334437 .. 60338304 (+)
Sequence length	1123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTCGAGACAGGAATAGAAGCCTTGATTTGGGATTCTGGGTTCCTTTTGTCAGTTTATGTACTGAGAAATGTCGTCTGCTGGTATCACTGCTTCGCCACTGCACTGCACTCCACTCTCAATTCAGCACCAATCATCTTCATTCATCCATTTCTCTAAAAAATTCAGTGGAAAATCTTCATTTATTGTGTATTTCAATCTACCCAGTAAAAAATCTCTCTCAAAACCAATCAAATTTCATGTAAATTGCTCTTCAAGCAGCCAATTGTCGAGTTCATCAGACCAAAATCTCCCTCCTCGAGAACAAGAACTAGAAATAGAACAGGTCTATCTTTCTTTCTCTCTCCAGTTGTTAAGAGTTTCTTGTTAATTAATATAAATATTTGATAGATTTCTAGGGGTTAATTNCTCCAGTTGTTAAGAGTTTCTTGTTAATTAATATAAATATTTGATAGATTTCTAGGGGTTAATTTATTTATTATATTGCAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGTATAGTCTCTTCTCCAAACCCCAAAATTGAGAATAATAACAATTTTAATATTTGATCTTTATGGAAAATGAANCTCCAGTTGTTAAGAGTTTCTTGTTAATTAATATAAATATTTGATAGATTTCTAGGGGTTAATTTATTTATTATATTGCAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGTATAGTTTCTTCTCCAAACCCCAAAATTGAGAATAATAACAATTTTAATATTTGATCTTTATGGAAAATGAANCTTCTCCAAACCCCAAAATTGAGAATAATAACAATTTTAATATTTGATCTTTATGGAAAATGAATTATTATGGGTTAGGTAAATTCAGCAGAAATGAGTGCAAAATTGGCAAAGCTTGGATTAGCAGCTGTGCTTGCTTATGGATTGTTTGATGGGGTCACTTACACCAGTTTCTTTGTGATGGCCTTTCTTGGATATGAGAAGAGTACTGGCAACAATCCTGCTGCTAATATCAAATCACTTATTGGGGTACTTCCTAACCCCACTCTTATATGTAGCCTTTCCCTTGTTAAAAGAGGGGGATAACATATCTCATTTCTGAATTTATATACTTAACTGCTTTGGTATTGATTGTGTTATAAGAGCTATGTGTTTATTACTTGTGTTAAAAAATCAAACTTGTAGCATTTTCTGATTTGTTGGGTGCTAAACTATACAGGGCATAACCGTGTAACTAGTAAGATTGTCAATCCCAGTACAGGATTGTGTGAAGTGTTGTGTGTCATTGTACCAAATTCTCCAGAATAAAAGGATGAATTGTGTTAATTAGCTTATTGCATGGGTGATGAACTGTATAGGGTGTGTGACTAGTAATTTAAAAGGTGCCATTCCTAAGGATTTCGTGATGTGTGTTATATGTCACTTTACATGAAAACATATCACATGGACATACTCCGTATTATGTTAGTTAGAGAGTTAAGCAGCGCATAGCGCTGATTGTTGTGTTTCGCCTTTGCAGTCTGCACATTATGTTATGACAGGAGTGGAGACTACACAGATTTTCCCTCCTATGATGGCAAGAAACATAGATTTTAGGAAAATATACTATTGAAGTTGCTGAGTAATTTTTCAAGAGTACCTCTAAATTGGGCTTAGGAAAATATACTATTGAAGTTGCTGAGTAATTTTTCAAGAGTACCTCTAAATTGGGCTCTCCTAGTTTTCTGAATTCTATTAGGAGTTCTCATCTCCACTTTGTTGCTGTCTTGGTATTACTTTGCTCACCACAAAGCTACCAACTCTGTCATGTACTTTAATTGTGCTTTTCACACCAGAAGTAAAAGTTAGTAGTTTGAAGGTGTTTACTGTTTTGCTTCGGCTTTTTAGTTTGAGTTTTCACATCAGAAGCCAACAAGTACCCTTACTACTGCTACTATGGTTGTCAGTTTCAGTTTACACTTCAGGTCTTAATAGTATTAACTTACCATGTAAAAGTATGGATAAATATATCGGTGGAAATAGCTGGGTTTGGATCAGGTTCGCCACCCGTGTGTCGTGCCTGAATGTGGTCGAGCTTATGGAGTATAGAGTCTACAGATAATAGACTAGTTTGCTTCCTTCGTTTTATCACCTGGAAAAAAAGAGAAATGGACTGATAAACCCACACATATGCCAACCTATTCTGTTTCATCAGGAGGGAAAACATTCATTGGCACTTGGAGTGAAAGTTAAAAAGTTAAGTTGGACACTTGAAATGACAAACAATTCAATGGCTATAGGCCTCCCTCCCTATATGCCTCCATGAACTGAGTTGAAATCGTGTCAAGACTGACTCAAGAGTCTTTCTTATGACAATCAGTTGTATTTATCCTTAGCTAATCACAAAAGTTCAAAATCCAGACCATTCATGTCCTTGAATTGGAATTGCATTAGCAGTTTAGCACTGTGGTGGGTCTATCATCTTCTTTGCTAGTGTAATCAACATGGTATGCTAGGATATTCAATGGCTTTTAGATTTCATACATTTGGCTTCCTCATAATTGTTCTGCTTCTACGGGTGCTAACAGTTCCTCAGAAATGACAAACAATTCAATGGTCATAGCCACCCTCTCCTATTAGGGTGAGTTTATCCCTAAGACTCACCCACAATCTTCAGACTCTGCCACATCAGTTTTTCACTAACTTTTTCATTATTCAGACTCACACAAGACTCTCCCTATTTTTGCACATTATCCCCAAACTCGCCTCATACTCAACTAAACTCCTTAAAAGAGATAATTAAATAGGATAAAGTATAATGATGTGGTACAATTTGATTTGGTCGGAGAAAAAGTGCAGTCTTAAGTGATTCTTGAGTGAATCTTGGATTTTCAACTCACTTCAAGACTTGTTGTAGTCTTTTACCACATTATCCCAAGACTTAGACCAGGACTCACCTCGAGACTTGGGATAAACTCACCCTTTAGTACTTACTACTTAGTAGTAACCCCACATAGGGATTAGATTTTAAATCCAATTTCACCCTTCATCTTCCCTCCAAGCTCCCCTATTTGAGAAAACCCTCAAACAATGCACTACTGCTGTCATCTTTTTCTTTTTCCTGGACTGTATTATTTGGTCAATAAACATAAAAGTCCCCATGTGCTTCAACTCCTAAAATATACTCCTACATATGTTCAAGTGAAATTTCTTGTTCCATGTTTTCCTGGTTACTGAAAGAGAAGTCTTGGTGTCAATTTATTGTTCCAAATCTATCCTATGTTTTTCTGCGTATTGTTTCCTCACAAGACTTTGATATTCCAGATAGTTCTCTTGATGTGGGCTGGAAACAACGTCACAAGACCCTTTCGAGTGGCAGGGGCAGCAGCACTCGCCCCAGTTATAGACCAAGAATTAAAGAAGATCCAGAAAGCTCTCAACTTACCCAGTCTTGTTTACGCTTTTGCCCTTGTGGCAGGAATTGTTGCTGCATCTTGTTTTACAGTTGCAGGTCTGCTAATTCTTTCAAGATGGGGAGCATAGATTTCAAGTTGAGGAATGTAGCAGAAGAAAGCTACCTTTGGCTTAATGTTATAATCTTGAAGCCAAATTTCTCTATCAATTTTTTGCAGAATTTACTTGTATAGATAATAGCTTGATAAACTTTCTTAACAAACTTATTATTTAGACAAAGGCTCCAGAATTTACTTGTATAGATACTCCACCTCTCCTTTTTTTTCAATTTTGTTTTAACCTACTGGTACTTCAGCAAACTAAACCGCTCCCGTTACTAAATTCTCAGGTTAACAAGGATCTGAAAAAATAGTGTTCAGATTTCTAGAAATGTATAGAATCAATCAATCAATCAATCAATCAAGA

mRNA sequence

TTAGTCGAGACAGGAATAGAAGCCTTGATTTGGGATTCTGGGTTCCTTTTGTCAGTTTATGTACTGAGAAATGTCGTCTGCTGGTATCACTGCTTCGCCACTGCACTGCACTCCACTCTCAATTCAGCACCAATCATCTTCATTCATCCATTTCTCTAAAAAATTCAGTGGAAAATCTTCATTTATTGTGTATTTCAATCTACCCAGTAAAAAATCTCTCTCAAAACCAATCAAATTTCATGTAAATTGCTCTTCAAGCAGCCAATTGTCGAGTTCATCAGACCAAAATCTCCCTCCTCGAGAACAAGAACTAGAAATAGAACAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGTAAATTCAGCAGAAATGAGTGCAAAATTGGCAAAGCTTGGATTAGCAGCTGTGCTTGCTTATGGATTGTTTGATGGGGTCACTTACACCAGTTTCTTTGTGATGGCCTTTCTTGGATATGAGAAGAGTACTGGCAACAATCCTGCTGCTAATATCAAATCACTTATTGGGATAGTTCTCTTGATGTGGGCTGGAAACAACGTCACAAGACCCTTTCGAGTGGCAGGGGCAGCAGCACTCGCCCCAGTTATAGACCAAGAATTAAAGAAGATCCAGAAAGCTCTCAACTTACCCAGTCTTGTTTACGCTTTTGCCCTTGTGGCAGGAATTGTTGCTGCATCTTGTTTTACAGTTGCAGGTCTGCTAATTCTTTCAAGATGGGGAGCATAGATTTCAAGTTGAGGAATGTAGCAGAAGAAAGCTACCTTTGGCTTAATGTTATAATCTTGAAGCCAAATTTCTCTATCAATTTTTTGCAGAATTTACTTGTATAGATAATAGCTTGATAAACTTTCTTAACAAACTTATTATTTAGACAAAGGCTCCAGAATTTACTTGTATAGATACTCCACCTCTCCTTTTTTTTCAATTTTGTTTTAACCTACTGGTACTTCAGCAAACTAAACCGCTCCCGTTACTAAATTCTCAGGTTAACAAGGATCTGAAAAAATAGTGTTCAGATTTCTAGAAATGTATAGAATCAATCAATCAATCAATCAATCAAGA

Coding sequence (CDS)

ATGTCGTCTGCTGGTATCACTGCTTCGCCACTGCACTGCACTCCACTCTCAATTCAGCACCAATCATCTTCATTCATCCATTTCTCTAAAAAATTCAGTGGAAAATCTTCATTTATTGTGTATTTCAATCTACCCAGTAAAAAATCTCTCTCAAAACCAATCAAATTTCATGTAAATTGCTCTTCAAGCAGCCAATTGTCGAGTTCATCAGACCAAAATCTCCCTCCTCGAGAACAAGAACTAGAAATAGAACAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGAGGAAAAAAAAGAGGGATTTTGGAAAAAATGGAAGGTAAATTCAGCAGAAATGAGTGCAAAATTGGCAAAGCTTGGATTAGCAGCTGTGCTTGCTTATGGATTGTTTGATGGGGTCACTTACACCAGTTTCTTTGTGATGGCCTTTCTTGGATATGAGAAGAGTACTGGCAACAATCCTGCTGCTAATATCAAATCACTTATTGGGATAGTTCTCTTGATGTGGGCTGGAAACAACGTCACAAGACCCTTTCGAGTGGCAGGGGCAGCAGCACTCGCCCCAGTTATAGACCAAGAATTAAAGAAGATCCAGAAAGCTCTCAACTTACCCAGTCTTGTTTACGCTTTTGCCCTTGTGGCAGGAATTGTTGCTGCATCTTGTTTTACAGTTGCAGGTCTGCTAATTCTTTCAAGATGGGGAGCATAG

Protein sequence

MSSAGITASPLHCTPLSIQHQSSSFIHFSKKFSGKSSFIVYFNLPSKKSLSKPIKFHVNCSSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEMSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGNNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSRWGA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19486	Spo19486	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19486.1	Spo19486.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19486.1.exon.1	Spo19486.1.exon.1	exon
Spo19486.1.exon.2	Spo19486.1.exon.2	exon
Spo19486.1.exon.3	Spo19486.1.exon.3	exon
Spo19486.1.exon.4	Spo19486.1.exon.4	exon
Spo19486.1.exon.5	Spo19486.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19486.1.utr5p.1	Spo19486.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19486.1.CDS.1	Spo19486.1.CDS.1	CDS
Spo19486.1.CDS.2	Spo19486.1.CDS.2	CDS
Spo19486.1.CDS.3	Spo19486.1.CDS.3	CDS
Spo19486.1.CDS.4	Spo19486.1.CDS.4	CDS
Spo19486.1.CDS.5	Spo19486.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19486.1.utr3p.1	Spo19486.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo19486.1 vs. NCBI nr
Match: gi|731311333|ref|XP_010668340.1| (PREDICTED: uncharacterized protein LOC104885327 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 289.3 bits (739), Expect = 6.200e-75
Identity = 163/237 (68.78%), Postives = 183/237 (77.22%), Query Frame = 1


		  
Query: 1   MSSAGITASPLHCTPLSIQHQSSSFIHFSKKFSGKSSFIVYFNLPSKKSLSKPIKFHVNC 60
           M SAG+TASPLH TPL     S SFI+  +K + + +F   F  P+   LSK IKFHV  
Sbjct: 1   MLSAGVTASPLHSTPLLNHKLSPSFINLFQKINEEPNFTGKFIQPTNNILSKSIKFHVKS 60

Query: 61  SSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEMSAKLA 120
           SSS+Q   SSDQ LPP EQ+                +++   GFW+KWK NSAEMSAKLA
Sbjct: 61  SSSTQGFGSSDQILPPEEQQ----------------QDQTNVGFWQKWKANSAEMSAKLA 120

Query: 121 KLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGNNVTRP 180
           KLGLAAVLAYGLFDGVTYT+FFVM+FLGYEKSTGNNPAAN+ +LIGIVLLMWAGNNVTRP
Sbjct: 121 KLGLAAVLAYGLFDGVTYTTFFVMSFLGYEKSTGNNPAANLNALIGIVLLMWAGNNVTRP 180

Query: 181 FRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSRWG 238
           FRVAGAAALAPVID+ L+KIQKALNLPSLVYAF+LV GIVA SCFTV GLLILSRWG
Sbjct: 181 FRVAGAAALAPVIDKGLRKIQKALNLPSLVYAFSLVVGIVATSCFTVIGLLILSRWG 221

[Close]

BLAST of Spo19486.1 vs. NCBI nr
Match: gi|902221005|gb|KNA18754.1| (hypothetical protein SOVF_067860 [Spinacia oleracea])

HSP 1 Score: 235.0 bits (598), Expect = 1.400e-58
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


		  
Query: 115 MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG 174
           MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG
Sbjct: 1   MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG 60

Query: 175 NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS 234
           NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS
Sbjct: 61  NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS 120

Query: 235 RWGA 239
           RWGA
Sbjct: 121 RWGA 124

[Close]

BLAST of Spo19486.1 vs. NCBI nr
Match: gi|698483641|ref|XP_009788671.1| (PREDICTED: uncharacterized protein LOC104236446 [Nicotiana sylvestris])

HSP 1 Score: 226.5 bits (576), Expect = 5.000e-56
Identity = 121/182 (66.48%), Postives = 142/182 (78.02%), Query Frame = 1


		  
Query: 56  FHVNCSSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEM 115
           + + CSS +Q S++ D      ++  E+  +E K             GFWKKWK NSAEM
Sbjct: 54  YSIKCSSPTQGSTADDSFF---QENKELNNQESK-------------GFWKKWKENSAEM 113

Query: 116 SAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGN 175
           SAKLAKLGLAAVLAYGLFDGVTYT FFV+AFLGYEKSTGNNPAAN+++L+GI++ MWAGN
Sbjct: 114 SAKLAKLGLAAVLAYGLFDGVTYTCFFVLAFLGYEKSTGNNPAANLQALLGIIIAMWAGN 173

Query: 176 NVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSR 235
           NVTRPFRVAGAAALAP ID+ L++IQK  N PSLVYAFALV GIVA +CFT+ GLLILSR
Sbjct: 174 NVTRPFRVAGAAALAPAIDKGLRRIQKYFNFPSLVYAFALVVGIVAGTCFTIIGLLILSR 219

Query: 236 WG 238
           WG
Sbjct: 234 WG 219

[Close]

BLAST of Spo19486.1 vs. NCBI nr
Match: gi|565361156|ref|XP_006347324.1| (PREDICTED: uncharacterized protein LOC102580174 isoform X1 [Solanum tuberosum])

HSP 1 Score: 225.7 bits (574), Expect = 8.500e-56
Identity = 124/196 (63.27%), Postives = 146/196 (74.49%), Query Frame = 1


		  
Query: 42  FNLPSKKSLSKPIKFHVNCSSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKK 101
           FNL +   LS      + CSS SQ  S++D N   + + L+                ++ 
Sbjct: 40  FNLLNTCPLSH---LSIKCSSPSQYGSTADDNFFQQNKNLD---------------NQES 99

Query: 102 EGFWKKWKVNSAEMSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANI 161
            GFWKKWK NSAEMSAKLAKLGLAAVLAYG+ DGVTYTSFFV+AF+GYEK+TGNNPAAN+
Sbjct: 100 RGFWKKWKENSAEMSAKLAKLGLAAVLAYGIIDGVTYTSFFVLAFMGYEKTTGNNPAANL 159

Query: 162 KSLIGIVLLMWAGNNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVA 221
           +SL+GI++ MW GNNVTRPFRVAGAAALAP ID+ LK+IQK LN PSLVYAFALV  IVA
Sbjct: 160 QSLLGIIIAMWTGNNVTRPFRVAGAAALAPAIDKGLKRIQKYLNFPSLVYAFALVVTIVA 217

Query: 222 ASCFTVAGLLILSRWG 238
            +CFT+ GLLILSRWG
Sbjct: 220 GTCFTIIGLLILSRWG 217

[Close]

BLAST of Spo19486.1 vs. NCBI nr
Match: gi|697130515|ref|XP_009619314.1| (PREDICTED: uncharacterized protein LOC104111340 isoform X3 [Nicotiana tomentosiformis])

HSP 1 Score: 223.0 bits (567), Expect = 5.500e-55
Identity = 132/236 (55.93%), Postives = 160/236 (67.80%), Query Frame = 1


		  
Query: 2   SSAGITASPLHCTPLSIQHQSSSFIHFSKKFSGKSSFIVYFNLPSKKSLSKPIKFHVNCS 61
           +S G  +     +P S  H  + F+   ++  GK S    F L           F + CS
Sbjct: 10  ASGGAASQRFLLSPRSTAH-FTYFLPSLQQLEGKRSNFKTFPLSH---------FSIKCS 69

Query: 62  SSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEMSAKLAK 121
           S +Q S++ D              +E KE        ++ +GFWKKWK NSAEMSAKLAK
Sbjct: 70  SPTQGSTADDSFF-----------QENKES-----NNQESKGFWKKWKENSAEMSAKLAK 129

Query: 122 LGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGNNVTRPF 181
           LGLAAVLAYGLFDGVTYTSFFV+AFLGYEKSTGNNP AN+++L+GI++ MWAGNNVTRPF
Sbjct: 130 LGLAAVLAYGLFDGVTYTSFFVLAFLGYEKSTGNNPTANLQALLGIIIAMWAGNNVTRPF 189

Query: 182 RVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSRWG 238
           RVAGAAALAP ID+ L++IQK  N P+LVYAFALV GIVA +CFT+ GLLILSRWG
Sbjct: 190 RVAGAAALAPAIDKGLRRIQKYFNFPTLVYAFALVVGIVAGACFTIIGLLILSRWG 219

[Close]

BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D3G6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003270 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.400e-75
Identity = 163/237 (68.78%), Postives = 183/237 (77.22%), Query Frame = 1


		  
Query: 1   MSSAGITASPLHCTPLSIQHQSSSFIHFSKKFSGKSSFIVYFNLPSKKSLSKPIKFHVNC 60
           M SAG+TASPLH TPL     S SFI+  +K + + +F   F  P+   LSK IKFHV  
Sbjct: 1   MLSAGVTASPLHSTPLLNHKLSPSFINLFQKINEEPNFTGKFIQPTNNILSKSIKFHVKS 60

Query: 61  SSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEMSAKLA 120
           SSS+Q   SSDQ LPP EQ+                +++   GFW+KWK NSAEMSAKLA
Sbjct: 61  SSSTQGFGSSDQILPPEEQQ----------------QDQTNVGFWQKWKANSAEMSAKLA 120

Query: 121 KLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGNNVTRP 180
           KLGLAAVLAYGLFDGVTYT+FFVM+FLGYEKSTGNNPAAN+ +LIGIVLLMWAGNNVTRP
Sbjct: 121 KLGLAAVLAYGLFDGVTYTTFFVMSFLGYEKSTGNNPAANLNALIGIVLLMWAGNNVTRP 180

Query: 181 FRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSRWG 238
           FRVAGAAALAPVID+ L+KIQKALNLPSLVYAF+LV GIVA SCFTV GLLILSRWG
Sbjct: 181 FRVAGAAALAPVIDKGLRKIQKALNLPSLVYAFSLVVGIVATSCFTVIGLLILSRWG 221

[Close]

BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIJ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067860 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.700e-59
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


		  
Query: 115 MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG 174
           MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG
Sbjct: 1   MSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAG 60

Query: 175 NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS 234
           NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS
Sbjct: 61  NNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILS 120

Query: 235 RWGA 239
           RWGA
Sbjct: 121 RWGA 124

[Close]

BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Match: M1CKL5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027028 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.900e-56
Identity = 124/196 (63.27%), Postives = 146/196 (74.49%), Query Frame = 1


		  
Query: 42  FNLPSKKSLSKPIKFHVNCSSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKK 101
           FNL +   LS      + CSS SQ  S++D N   + + L+                ++ 
Sbjct: 40  FNLLNTCPLSH---LSIKCSSPSQYGSTADDNFFQQNKNLD---------------NQES 99

Query: 102 EGFWKKWKVNSAEMSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANI 161
            GFWKKWK NSAEMSAKLAKLGLAAVLAYG+ DGVTYTSFFV+AF+GYEK+TGNNPAAN+
Sbjct: 100 RGFWKKWKENSAEMSAKLAKLGLAAVLAYGIIDGVTYTSFFVLAFMGYEKTTGNNPAANL 159

Query: 162 KSLIGIVLLMWAGNNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVA 221
           +SL+GI++ MW GNNVTRPFRVAGAAALAP ID+ LK+IQK LN PSLVYAFALV  IVA
Sbjct: 160 QSLLGIIIAMWTGNNVTRPFRVAGAAALAPAIDKGLKRIQKYLNFPSLVYAFALVVTIVA 217

Query: 222 ASCFTVAGLLILSRWG 238
            +CFT+ GLLILSRWG
Sbjct: 220 GTCFTIIGLLILSRWG 217

[Close]

BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HEY1_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.900e-56
Identity = 124/196 (63.27%), Postives = 146/196 (74.49%), Query Frame = 1


		  
Query: 42  FNLPSKKSLSKPIKFHVNCSSSSQLSSSSDQNLPPREQELEIEQEEKKEGFWKKWKEEKK 101
           FNL +   LS      + CSS SQ  S++D N   + + L+                ++ 
Sbjct: 40  FNLLNTCPLSH---LSIKCSSPSQYGSTADDNFFQQNKNLD---------------NQES 99

Query: 102 EGFWKKWKVNSAEMSAKLAKLGLAAVLAYGLFDGVTYTSFFVMAFLGYEKSTGNNPAANI 161
            GFWKKWK NSAEMSAKLAKLGLAAVLAYG+ DGVTYTSFFV+AF+GYEK+TGNNPAAN+
Sbjct: 100 RGFWKKWKENSAEMSAKLAKLGLAAVLAYGIIDGVTYTSFFVLAFMGYEKTTGNNPAANL 159

Query: 162 KSLIGIVLLMWAGNNVTRPFRVAGAAALAPVIDQELKKIQKALNLPSLVYAFALVAGIVA 221
           +SL+GI++ MW GNNVTRPFRVAGAAALAP ID+ LK+IQK LN PSLVYAFALV  IVA
Sbjct: 160 QSLLGIIIAMWTGNNVTRPFRVAGAAALAPAIDKGLKRIQKYLNFPSLVYAFALVVTIVA 217

Query: 222 ASCFTVAGLLILSRWG 238
            +CFT+ GLLILSRWG
Sbjct: 220 GTCFTIIGLLILSRWG 217

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BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Match: A0A022RZ75_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013615mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.900e-54
Identity = 129/228 (56.58%), Postives = 158/228 (69.30%), Query Frame = 1


		  
Query: 10  PLHCTPLSIQHQSSSFIHFSKKFSGKSSFIVYFNLPSKKSLSKPIKFHVNCSSSSQLSSS 69
           P +C  L  +  + +     +K       I  FNLP  +   +  +F V+CSSS+    S
Sbjct: 7   PPNCAALQTKLYNPTTSSCRRKLCNNKDSIFKFNLPLNRRCIQ--QFSVSCSSSA----S 66

Query: 70  SDQNLPPREQELEIEQEEKKEGFWKKWKEEKKEGFWKKWKVNSAEMSAKLAKLGLAAVLA 129
           S+ +   + QEL   QE+K              GF +KWK +SAEMSAKLAKLGLAAVLA
Sbjct: 67  SEDSFLQQHQELSNNQEKK--------------GFLQKWKESSAEMSAKLAKLGLAAVLA 126

Query: 130 YGLFDGVTYTSFFVMAFLGYEKSTGNNPAANIKSLIGIVLLMWAGNNVTRPFRVAGAAAL 189
           YG+FDG+TYTSFFV+AFLGYEKSTG NPAAN+++L+GIV+LMW GNNVTRPFRVAGAAAL
Sbjct: 127 YGIFDGITYTSFFVLAFLGYEKSTGKNPAANLQALVGIVILMWTGNNVTRPFRVAGAAAL 186

Query: 190 APVIDQELKKIQKALNLPSLVYAFALVAGIVAASCFTVAGLLILSRWG 238
           APVID+ L++IQ   N P+LVYAFALV G+VA  C TV GLLILSRWG
Sbjct: 187 APVIDKGLRRIQTYFNFPTLVYAFALVVGLVAGLCSTVVGLLILSRWG 214

The following BLAST results are available for this feature:

BLAST of Spo19486.1 vs. NCBI nr
BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
BLAST of Spo19486.1 vs. ExPASy Swiss-Prot
BLAST of Spo19486.1 vs. TAIR (Arabidopsis)

BLAST of Spo19486.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731311333\|ref\|XP_010668340.1\|	6.2e-75	68.7	PREDICTED: uncharacterized pro...	[more]
gi\|902221005\|gb\|KNA18754.1\|	1.4e-58	100.	hypothetical protein SOVF_0678...	[more]
gi\|698483641\|ref\|XP_009788671.1\|	5.0e-56	66.4	PREDICTED: uncharacterized pro...	[more]
gi\|565361156\|ref\|XP_006347324.1\|	8.5e-56	63.2	PREDICTED: uncharacterized pro...	[more]
gi\|697130515\|ref\|XP_009619314.1\|	5.5e-55	55.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo19486.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8D3G6_BETVU	4.4e-75	68.7	Uncharacterized protein OS=Bet...	[more]
A0A0K9RIJ7_SPIOL	9.7e-59	100.	Uncharacterized protein OS=Spi...	[more]
M1CKL5_SOLTU	5.9e-56	63.2	Uncharacterized protein OS=Sol...	[more]
A0A0V0HEY1_SOLCH	5.9e-56	63.2	Putative ovule protein OS=Sola...	[more]
A0A022RZ75_ERYGU	1.9e-54	56.5	Uncharacterized protein OS=Ery...	[more]

BLAST of Spo19486.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo19486.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34370	FAMILY NOT NAMED	coord: 103..237 score: 2.9
None	No IPR available	PANTHER	PTHR34370:SF1	SUBFAMILY NOT NAMED	coord: 103..237 score: 2.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0070469	respiratory chain
molecular_function	GO:0009916	alternative oxidase activity
molecular_function	GO:0046872	metal ion binding