Spo19586.1 (mRNA)

Overview
NameSpo19586.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionEukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10)
LocationSpoScf_00508 : 73785 .. 74974 (-)
Sequence length968
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGATCTTGAATCTGATACCGTGAGAAATCACCTTACAGTGCTTGCTGAATCTTTGAATAAAGCAAGGTCCACGATATATCCGATCCTCCCCCTAACAAAGCATCAAAAATCGAAGATACTTTGCCTGGTTTAGCTGAGCTTGTGGAGAAGGAACATAAGAAGCTTCTTGCTCGTAAAACAATCATTGAACAGCGCAAAGAGGAACAAGAACGCCAGCTTTTAGAGAAAGTTTGTTCACTCATTGATGTACCTTTAATTCAGGCAGTTGTTCTGTTTTAGAGACTTGACTGCTTTGGTGTCTTAAAAGGAGCGTGAGGAAGAGTCGAAGATATTACAGCTACAGAAAAGTAATGTGGAAGCTGAACAAAAAAGGCTTTCTTCTGAACTTGAGAAGAGGAAAATTCAGCGCATCCAAAAGGAAATAGAAGAACGTGAGATTGAAGAAGCCAAATCCCTACTTCAGGAAAAGTTTTCCAAAAATAAGAAGAAACCACTTATAGAAGGGGTAATTGTTTATTTTCTGAAAATACTTCTCGATGTTTGTTGGTTGGTGTTATAAAGTGTGTTATCTACTTCATTTCAGGATAAGTTGACAAAGCAAGCATTGATGGAGTTGGGTCTCAACGAGCAGCTGAGGGAGAAACAAGAAATGGAGAAAAAACTACAGAAGTTGAGCAAGCAAATGGATTATCTTAAGAGAGCTAAGAGAGAGGAGGCAGCTCCATTAATTGAATCTGCATCTGTACATGTACGGAATCTTTTATGGTGTTCCTTGTTTGGATTCTTAGTTCCTACCTTTTGGTAATAAATTTTGCTAATTTACCAAAATAAAAAATGGATTATTATTGTAATGATTTTTTTTGTAAAATAAATGTACTATTTGCAGCGCGCACTGTTAGGTGAATGCTGCGAATAGTTTCAGAAATGTGGCTTTGAAATCTCTTTTTGCAACGCCTATGTACTGCAAAAGGTTGTGAAAAATAGACTTTTTGCAACGCGTGTGAAACACCGTGCGTTGTAATTAATGGATTTTTGCAGCGTTTTTGTTCGTTGCAAATAAAAGTCAACTATTTGCAACCATCACAATTGCAGCGCTCAAAAACGCTCCAAAAAGCCCCTTTTACGCGCGCTGCAAATGGCATTTTTTCTACTAGTGATACATTATGGTTATTTCAATTATTATGA

mRNA sequence

ATGCAGGATCTTGAATCTGATACCGTGAGAAATCACCTTACAGTGCTTGCTGAATCTTTGAATAAAGCAAGGTCCACGATATATCCGATCCTCCCCCTAACAAAGCATCAAAAATCGAAGATACTTTGCCTGCGCAAAGAGGAACAAGAACGCCAGCTTTTAGAGAAAGAGCGTGAGGAAGAGTCGAAGATATTACAGCTACAGAAAAGTAATGTGGAAGCTGAACAAAAAAGGCTTTCTTCTGAACTTGAGAAGAGGAAAATTCAGCGCATCCAAAAGGAAATAGAAGAACGTGAGATTGAAGAAGCCAAATCCCTACTTCAGGAAAAGTTTTCCAAAAATAAGAAGAAACCACTTATAGAAGGGGATAAGTTGACAAAGCAAGCATTGATGGAGTTGGGTCTCAACGAGCAGCTGAGGGAGAAACAAGAAATGGAGAAAAAACTACAGAAGTTGAGCAAGCAAATGGATTATCTTAAGAGAGCTAAGAGAGAGGAGGCAGCTCCATTAATTGAATCTGCATCTGTACATGTACGGAATCTTTTATGGTGTTCCTTGTTTGGATTCTTAGTTCCTACCTTTTGGTAATAAATTTTGCTAATTTACCAAAATAAAAAATGGATTATTATTGTAATGATTTTTTTTGTAAAATAAATGTACTATTTGCAGCGCGCACTGTTAGGTGAATGCTGCGAATAGTTTCAGAAATGTGGCTTTGAAATCTCTTTTTGCAACGCCTATGTACTGCAAAAGGTTGTGAAAAATAGACTTTTTGCAACGCGTGTGAAACACCGTGCGTTGTAATTAATGGATTTTTGCAGCGTTTTTGTTCGTTGCAAATAAAAGTCAACTATTTGCAACCATCACAATTGCAGCGCTCAAAAACGCTCCAAAAAGCCCCTTTTACGCGCGCTGCAAATGGCATTTTTTCTACTAGTGATACATTATGGTTATTTCAATTATTATGA

Coding sequence (CDS)

ATGCAGGATCTTGAATCTGATACCGTGAGAAATCACCTTACAGTGCTTGCTGAATCTTTGAATAAAGCAAGGTCCACGATATATCCGATCCTCCCCCTAACAAAGCATCAAAAATCGAAGATACTTTGCCTGCGCAAAGAGGAACAAGAACGCCAGCTTTTAGAGAAAGAGCGTGAGGAAGAGTCGAAGATATTACAGCTACAGAAAAGTAATGTGGAAGCTGAACAAAAAAGGCTTTCTTCTGAACTTGAGAAGAGGAAAATTCAGCGCATCCAAAAGGAAATAGAAGAACGTGAGATTGAAGAAGCCAAATCCCTACTTCAGGAAAAGTTTTCCAAAAATAAGAAGAAACCACTTATAGAAGGGGATAAGTTGACAAAGCAAGCATTGATGGAGTTGGGTCTCAACGAGCAGCTGAGGGAGAAACAAGAAATGGAGAAAAAACTACAGAAGTTGAGCAAGCAAATGGATTATCTTAAGAGAGCTAAGAGAGAGGAGGCAGCTCCATTAATTGAATCTGCATCTGTACATGTACGGAATCTTTTATGGTGTTCCTTGTTTGGATTCTTAGTTCCTACCTTTTGGTAA

Protein sequence

MQDLESDTVRNHLTVLAESLNKARSTIYPILPLTKHQKSKILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRAKREEAAPLIESASVHVRNLLWCSLFGFLVPTFW
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo19586Spo19586gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo19586.1Spo19586.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19586.1.CDS.4Spo19586.1.CDS.4CDS
Spo19586.1.CDS.3Spo19586.1.CDS.3CDS
Spo19586.1.CDS.2Spo19586.1.CDS.2CDS
Spo19586.1.CDS.1Spo19586.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19586.1.utr3p.1Spo19586.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19586.1.exon.4Spo19586.1.exon.4exon
Spo19586.1.exon.3Spo19586.1.exon.3exon
Spo19586.1.exon.2Spo19586.1.exon.2exon
Spo19586.1.exon.1Spo19586.1.exon.1exon


Homology
[Close]
BLAST of Spo19586.1 vs. NCBI nr
Match: gi|902221196|gb|KNA18817.1| (hypothetical protein SOVF_067220 [Spinacia oleracea])

HSP 1 Score: 271.6 bits (693), Expect = 1.100e-69
Identity = 167/213 (78.40%), Postives = 174/213 (81.69%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPIL--------------PLTKHQKSKILCL---- 62
           DLESDTV+NHLT LA SLNKARS IYP L               L + +  K+L      
Sbjct: 40  DLESDTVKNHLTALAVSLNKARSMIYPPLNKASKIEDTLPGLAKLVEKEHKKLLARKTII 99

Query: 63  --RKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEE 122
             R EEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEEREIEE
Sbjct: 100 EQRNEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEEREIEE 159

Query: 123 AKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRA 182
           AKSL QEKFSKNKKKPLIE DKLTKQALMEL LNEQLREKQEMEKKLQKL+KQMDYL+RA
Sbjct: 160 AKSLPQEKFSKNKKKPLIEWDKLTKQALMELALNEQLREKQEMEKKLQKLNKQMDYLERA 219

Query: 183 KREEAAPLIESASVHVRNLLWCSLFGFLVPTFW 196
            REEAA LIES SVHVRNLLWCSLFGFLVPTFW
Sbjct: 220 NREEAAQLIESTSVHVRNLLWCSLFGFLVPTFW 252
[Close]
BLAST of Spo19586.1 vs. NCBI nr
Match: gi|902091283|gb|KNA03329.1| (hypothetical protein SOVF_210250, partial [Spinacia oleracea])

HSP 1 Score: 242.3 bits (617), Expect = 7.200e-61
Identity = 142/157 (90.45%), Postives = 147/157 (93.63%), Query Frame = 1 

		  

Query: 38  KSKILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEE 97
           +  I+  R EEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEE
Sbjct: 10  RKTIIEQRNEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEE 69

Query: 98  REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMD 157
           REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMEL LNEQLREKQEMEKKLQKL+KQMD
Sbjct: 70  REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELALNEQLREKQEMEKKLQKLNKQMD 129

Query: 158 YLKRAKREEAAPLIESASVHVRNLLWCSLFGFLVPTF 195
           YL+RA REEAA LIES SVHVRNLLWCSLFGFLVPTF
Sbjct: 130 YLERANREEAAQLIESTSVHVRNLLWCSLFGFLVPTF 166
[Close]
BLAST of Spo19586.1 vs. NCBI nr
Match: gi|902155157|gb|KNA05879.1| (hypothetical protein SOVF_186280 [Spinacia oleracea])

HSP 1 Score: 240.4 bits (612), Expect = 2.700e-60
Identity = 153/192 (79.69%), Postives = 159/192 (82.81%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPIL--------------PLTKHQKSKILCL---- 62
           DLESDTVRNHLT LAESLNKARS IYP L               L + +  K+L      
Sbjct: 177 DLESDTVRNHLTALAESLNKARSMIYPPLNKASKIEDTLPGLAELVEKEHKKLLARKTII 236

Query: 63  --RKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEE 122
             RKEEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEEREIEE
Sbjct: 237 EQRKEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEEREIEE 296

Query: 123 AKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRA 175
           AK+LLQEKFSKNKKKPLIEGDKLTKQALMEL LNEQLREKQEMEKKL KLSKQMDYL+RA
Sbjct: 297 AKALLQEKFSKNKKKPLIEGDKLTKQALMELALNEQLREKQEMEKKLLKLSKQMDYLERA 356
[Close]
BLAST of Spo19586.1 vs. NCBI nr
Match: gi|902222948|gb|KNA19333.1| (hypothetical protein SOVF_060490 [Spinacia oleracea])

HSP 1 Score: 218.4 bits (555), Expect = 1.100e-53
Identity = 141/194 (72.68%), Postives = 151/194 (77.84%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPILPLTKHQKSK---------------------- 62
           DLESDT+RNHLT LA SLNKARS IYP  PL K  K +                      
Sbjct: 512 DLESDTLRNHLTALAASLNKARSMIYP--PLNKASKIRDTLPGLAEVVEKEHKKLLARKA 571

Query: 63  ILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREI 122
           I+  RKEEQERQLLEKEREEE K L+LQK+  EAEQKRL+ E EKRKIQRIQ EIEERE 
Sbjct: 572 IIEQRKEEQERQLLEKEREEELKRLKLQKNTEEAEQKRLAIEFEKRKIQRIQNEIEERER 631

Query: 123 EEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           EEAK+LL EKFSKNKKKP+IEGDKLTKQALMEL LNEQLREKQEMEKKLQKLSKQMDYL+
Sbjct: 632 EEAKALLMEKFSKNKKKPIIEGDKLTKQALMELALNEQLREKQEMEKKLQKLSKQMDYLE 691
[Close]
BLAST of Spo19586.1 vs. NCBI nr
Match: gi|731326606|ref|XP_010674106.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 216.5 bits (550), Expect = 4.200e-53
Identity = 139/194 (71.65%), Postives = 150/194 (77.32%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPILPLTKHQK----------------------SK 62
           DLESD +RNHLTVLAESL KARS IYP  PL K  K                        
Sbjct: 512 DLESDNLRNHLTVLAESLKKARSMIYP--PLNKASKIGDTLPGLAEVVEKEHKKLLARKT 571

Query: 63  ILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREI 122
           I+  RKEEQERQLLEKEREEE K  Q QK+N EAEQKRL+SE EKRKIQRIQKEIEERE+
Sbjct: 572 IIEQRKEEQERQLLEKEREEELKRQQQQKTNEEAEQKRLASEYEKRKIQRIQKEIEEREL 631

Query: 123 EEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           EEAK+LLQEKF K +KKP+IEGDKLTKQALMEL LNEQL+EKQEMEKKLQKL KQMDYL+
Sbjct: 632 EEAKALLQEKFGKKQKKPIIEGDKLTKQALMELALNEQLKEKQEMEKKLQKLGKQMDYLE 691
[Close]
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067220 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.700e-70
Identity = 167/213 (78.40%), Postives = 174/213 (81.69%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPIL--------------PLTKHQKSKILCL---- 62
           DLESDTV+NHLT LA SLNKARS IYP L               L + +  K+L      
Sbjct: 40  DLESDTVKNHLTALAVSLNKARSMIYPPLNKASKIEDTLPGLAKLVEKEHKKLLARKTII 99

Query: 63  --RKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEE 122
             R EEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEEREIEE
Sbjct: 100 EQRNEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEEREIEE 159

Query: 123 AKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRA 182
           AKSL QEKFSKNKKKPLIE DKLTKQALMEL LNEQLREKQEMEKKLQKL+KQMDYL+RA
Sbjct: 160 AKSLPQEKFSKNKKKPLIEWDKLTKQALMELALNEQLREKQEMEKKLQKLNKQMDYLERA 219

Query: 183 KREEAAPLIESASVHVRNLLWCSLFGFLVPTFW 196
            REEAA LIES SVHVRNLLWCSLFGFLVPTFW
Sbjct: 220 NREEAAQLIESTSVHVRNLLWCSLFGFLVPTFW 252
[Close]
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7V8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_210250 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.000e-61
Identity = 142/157 (90.45%), Postives = 147/157 (93.63%), Query Frame = 1 

		  

Query: 38  KSKILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEE 97
           +  I+  R EEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEE
Sbjct: 10  RKTIIEQRNEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEE 69

Query: 98  REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMD 157
           REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMEL LNEQLREKQEMEKKLQKL+KQMD
Sbjct: 70  REIEEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELALNEQLREKQEMEKKLQKLNKQMD 129

Query: 158 YLKRAKREEAAPLIESASVHVRNLLWCSLFGFLVPTF 195
           YL+RA REEAA LIES SVHVRNLLWCSLFGFLVPTF
Sbjct: 130 YLERANREEAAQLIESTSVHVRNLLWCSLFGFLVPTF 166
[Close]
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QF21_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186280 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.900e-60
Identity = 153/192 (79.69%), Postives = 159/192 (82.81%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPIL--------------PLTKHQKSKILCL---- 62
           DLESDTVRNHLT LAESLNKARS IYP L               L + +  K+L      
Sbjct: 177 DLESDTVRNHLTALAESLNKARSMIYPPLNKASKIEDTLPGLAELVEKEHKKLLARKTII 236

Query: 63  --RKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEE 122
             RKEEQERQLLEKEREEESK LQLQKSNVEAEQKRL+SELEKRKIQRIQKEIEEREIEE
Sbjct: 237 EQRKEEQERQLLEKEREEESKRLQLQKSNVEAEQKRLASELEKRKIQRIQKEIEEREIEE 296

Query: 123 AKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRA 175
           AK+LLQEKFSKNKKKPLIEGDKLTKQALMEL LNEQLREKQEMEKKL KLSKQMDYL+RA
Sbjct: 297 AKALLQEKFSKNKKKPLIEGDKLTKQALMELALNEQLREKQEMEKKLLKLSKQMDYLERA 356
[Close]
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIK9_SPIOL (Eukaryotic translation initiation factor 3 subunit A OS=Spinacia oleracea GN=SOVF_060490 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.700e-54
Identity = 141/194 (72.68%), Postives = 151/194 (77.84%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPILPLTKHQKSK---------------------- 62
           DLESDT+RNHLT LA SLNKARS IYP  PL K  K +                      
Sbjct: 512 DLESDTLRNHLTALAASLNKARSMIYP--PLNKASKIRDTLPGLAEVVEKEHKKLLARKA 571

Query: 63  ILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREI 122
           I+  RKEEQERQLLEKEREEE K L+LQK+  EAEQKRL+ E EKRKIQRIQ EIEERE 
Sbjct: 572 IIEQRKEEQERQLLEKEREEELKRLKLQKNTEEAEQKRLAIEFEKRKIQRIQNEIEERER 631

Query: 123 EEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           EEAK+LL EKFSKNKKKP+IEGDKLTKQALMEL LNEQLREKQEMEKKLQKLSKQMDYL+
Sbjct: 632 EEAKALLMEKFSKNKKKPIIEGDKLTKQALMELALNEQLREKQEMEKKLQKLSKQMDYLE 691
[Close]
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLA4_BETVU (Eukaryotic translation initiation factor 3 subunit A OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076280 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.900e-53
Identity = 139/194 (71.65%), Postives = 150/194 (77.32%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYPILPLTKHQK----------------------SK 62
           DLESD +RNHLTVLAESL KARS IYP  PL K  K                        
Sbjct: 512 DLESDNLRNHLTVLAESLKKARSMIYP--PLNKASKIGDTLPGLAEVVEKEHKKLLARKT 571

Query: 63  ILCLRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREI 122
           I+  RKEEQERQLLEKEREEE K  Q QK+N EAEQKRL+SE EKRKIQRIQKEIEERE+
Sbjct: 572 IIEQRKEEQERQLLEKEREEELKRQQQQKTNEEAEQKRLASEYEKRKIQRIQKEIEEREL 631

Query: 123 EEAKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           EEAK+LLQEKF K +KKP+IEGDKLTKQALMEL LNEQL+EKQEMEKKLQKL KQMDYL+
Sbjct: 632 EEAKALLQEKFGKKQKKPIIEGDKLTKQALMELALNEQLKEKQEMEKKLQKLGKQMDYLE 691
[Close]
BLAST of Spo19586.1 vs. ExPASy Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.800e-38
Identity = 107/194 (55.15%), Postives = 141/194 (72.68%), Query Frame = 1 

		  

Query: 4   LESDTVRNHLTVLAESLNKARSTIYPI----------LP-----LTKHQK-----SKILC 63
           +ESD +R+HL V AESL+K R+ +YP+          +P     + K  K       I+ 
Sbjct: 513 IESDGLRDHLAVFAESLSKVRAMLYPVPSKASKLAGVIPNLADTVEKEHKRLLARKSIIE 572

Query: 64  LRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEEA 123
            RKE+QERQ LE EREEE K L+LQK   EAEQKRL++EL +R+ QRI +EIEE+E+EEA
Sbjct: 573 KRKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERRKQRILREIEEKELEEA 632

Query: 124 KSLLQE---KFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           ++LL+E   +  K KKKPL++G+K+TKQ++ E  L EQL+E+QEMEKKLQKL+K MDYL+
Sbjct: 633 QALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLE 692
[Close]
BLAST of Spo19586.1 vs. ExPASy Swiss-Prot
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.500e-34
Identity = 101/181 (55.80%), Postives = 130/181 (71.82%), Query Frame = 1 

		  

Query: 16  LAESLNKARSTIYP--------------ILPLTKHQKSKILCL------RKEEQERQLLE 75
           LAESL+KAR+ IYP              +  + + +  ++L        RKEEQER LLE
Sbjct: 525 LAESLSKARTMIYPPAKKAAKLGEALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLE 584

Query: 76  KEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEEAKSLLQE--KFSK 135
            ER EE+K   +QK   EAEQKR+++E E+R+ QRI KEIE+RE+EEA++LL E  K SK
Sbjct: 585 MERVEETKRRDVQKMTEEAEQKRIAAEYEQRRNQRILKEIEDRELEEAQALLHEAEKRSK 644

Query: 136 NKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRAKREEAAPLIES 175
            KKKP++EG+K+TK+ +MEL LNEQLRE+QEMEKKL K +K MD+L+RAKREEAAPLIES
Sbjct: 645 RKKKPVLEGEKMTKKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIES 704
[Close]
BLAST of Spo19586.1 vs. ExPASy Swiss-Prot
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.200e-29
Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 1 

		  

Query: 3   DLESDTVRNHLTVLAESLNKARSTIYP--------------ILPLTKHQKSKILCL---- 62
           D+ESD + +HL+VLA+SLNKAR  I P              +  + +++  ++L      
Sbjct: 510 DIESDGLSDHLSVLADSLNKARIHICPPVKKPSKLGESLISLAAIVENEHKRLLARKSII 569

Query: 63  --RKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEE 122
             RKEE ERQ+LEKE+EEE K +  QK  V+ E+ RL +E  +R+  RI++EIEE+   E
Sbjct: 570 EKRKEELERQILEKEKEEEKKRMSSQKKTVDEERVRLLNEQRQREQDRIRREIEEKNKAE 629

Query: 123 AKSLLQEKFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLKRA 175
           AK +L++     KK  ++EG+ LTK+A MEL  NEQL+E+ EMEKKLQK +K MDYL+RA
Sbjct: 630 AKKMLEDLNKAGKKHVVVEGE-LTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERA 689
[Close]
BLAST of Spo19586.1 vs. TAIR (Arabidopsis)
Match: AT4G11420.1 (eukaryotic translation initiation factor 3A)

HSP 1 Score: 159.5 bits (402), Expect = 2.200e-39
Identity = 107/194 (55.15%), Postives = 141/194 (72.68%), Query Frame = 1 

		  

Query: 4   LESDTVRNHLTVLAESLNKARSTIYPI----------LP-----LTKHQK-----SKILC 63
           +ESD +R+HL V AESL+K R+ +YP+          +P     + K  K       I+ 
Sbjct: 513 IESDGLRDHLAVFAESLSKVRAMLYPVPSKASKLAGVIPNLADTVEKEHKRLLARKSIIE 572

Query: 64  LRKEEQERQLLEKEREEESKILQLQKSNVEAEQKRLSSELEKRKIQRIQKEIEEREIEEA 123
            RKE+QERQ LE EREEE K L+LQK   EAEQKRL++EL +R+ QRI +EIEE+E+EEA
Sbjct: 573 KRKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERRKQRILREIEEKELEEA 632

Query: 124 KSLLQE---KFSKNKKKPLIEGDKLTKQALMELGLNEQLREKQEMEKKLQKLSKQMDYLK 175
           ++LL+E   +  K KKKPL++G+K+TKQ++ E  L EQL+E+QEMEKKLQKL+K MDYL+
Sbjct: 633 QALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLE 692
The following BLAST results are available for this feature:
BLAST of Spo19586.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902221196|gb|KNA18817.1|1.1e-6978.4hypothetical protein SOVF_0672... [more]
gi|902091283|gb|KNA03329.1|7.2e-6190.4hypothetical protein SOVF_2102... [more]
gi|902155157|gb|KNA05879.1|2.7e-6079.6hypothetical protein SOVF_1862... [more]
gi|902222948|gb|KNA19333.1|1.1e-5372.6hypothetical protein SOVF_0604... [more]
gi|731326606|ref|XP_010674106.1|4.2e-5371.6PREDICTED: eukaryotic translat... [more]
back to top
BLAST of Spo19586.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RIY2_SPIOL7.7e-7078.4Uncharacterized protein OS=Spi... [more]
A0A0K9Q7V8_SPIOL5.0e-6190.4Uncharacterized protein (Fragm... [more]
A0A0K9QF21_SPIOL1.9e-6079.6Uncharacterized protein OS=Spi... [more]
A0A0K9RIK9_SPIOL7.7e-5472.6Eukaryotic translation initiat... [more]
A0A0J8CLA4_BETVU2.9e-5371.6Eukaryotic translation initiat... [more]
back to top
BLAST of Spo19586.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
EIF3A_ARATH3.8e-3855.1Eukaryotic translation initiat... [more]
EIF3A_TOBAC1.5e-3455.8Eukaryotic translation initiat... [more]
EIF3A_MAIZE7.2e-2947.4Eukaryotic translation initiat... [more]
back to top
BLAST of Spo19586.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G11420.12.2e-3955.1eukaryotic translation initiat... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 81..113
score: -coord: 135..162
score: -coord: 44..77
scor

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0070993 translation preinitiation complex