Spo19752.1 (mRNA) | SpinachBase

Overview


Name	Spo19752.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	SAP domain-containing protein
Location	chr5 : 17453729 .. 17466250 (+)
Sequence length	1287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAACGGGGGCCTTGATTTACCGCGGTAACCCAAAAAATTCCCCGAAAGGGACAGTTTTACTGCCTTTCTCACTTGCTGCTAGCGCGCTGACGCTCGCCATATAGCTCTCATGCGGCTTCGTTATTACAAATCCAAGCCTCTAATACCGAAAGCACCGCCAATAAAAGTGTCTGCCATGGAAGAGGGTTCTTCTTCCGCATCTCAGCCGCCATCCGATTCCATTCCGACAACTAGTGGCACGGTTGCCGAGTTTCTCACCGACCTTCCATCTCGCGGCCTCTTCTCTTCCACCGCCGTTTCCTCTTCTAATCCGGTACTCTTTCTTTCTCCTCCACTATAATTAGCCCTAAGTACTATTTTTCTTTTGTATAGTGTTAATCTTTGCTGTAATTTATTTGGATTGCATTGACTCATTTAGATTACCGTAGTTATTGATTTTGATGCCCATTCCGTTGATTAATTTGGTTAATTTTGCTTCATTCAAAGTCTTACAATTGCTTCATTTGCTTGCAATCTAATTAATTGATGTTCATTTTGTCGATAGAATCGCTGTTTGCTGTTAATTTTTCCATAATTGAATGTATTAGATGTTCTGGTTCTACAACTTACAATTGTGTTAATATTTTGGGAAATTTGCTTAATATATAGAACTTTGAGCACTTCTTACAGGACTTTGTGCATTTATCAAGTATTATAATGAAGTTTTGGTCTTTAACATAATGCGAACTTGACAATGTGTGACGATACTGACGAAAAGTTACTCATCACTGTAAATATCTTTTGCTTGAAAATGCTGAAATGACAGGATTGGGATTCGTTTTGTCATGATGCTTTCCATTCACTCCGTATTTTATTGGAAAAACATTTGGGTTTTAGAGTTTGTTTGAGCTATTATGTTGTTACACATTATCAGGTTTGTGTTATATTTAAAGATCAACCAATTGTGTCATTAGTTGTTAATCACATAAAGTTCATGTTGAGAATTTTTTCCTAAATATATTATAAGTTGGTGGGTTCAGCTTGGTCAGCATCCGCAATTTCCCTAAATGCTACATTGTATTTAGCGCGAAAATTTCTTCTGGTTTCATGACTTTCATCTATTAGAAACTGTGTTGGAAGGGGTCATTTCAATTTCGCCGAGATTTCATCGAAGTTATGTTGTTAAAGCTGTTATCATGTTTCATGTACATGAAAAAAGAGATGTCTTTTGGCTACTAAGGCTTGTGACTTTTGATTTAACATTAACTTGAATCACTTGATCTCACTTTTATAAGACATTGCTTTGAGGAGATTGAATCTGTATGAATAATACATATTAACAAGCTATCACATCAATGGTATCAACTCCAAAGAGTATATTTGGTTAATATACTGTTCTACTTAGATATAATAGTTACATTGTTCCAACGTATCACAATTTGAATTCTTTGTGATTTATGAAAATATTGTTAATGCTTAAGCCCTGTTCTCTTTACCTTAAATAAGTTCTCCCGTAATTTTCAATAAAATATACTTCCTCCGTTCGTTTTTACTCGCAACGTTGGTCACTTTCACGCATGCCCCAATGCCCAACTTTGACCATCAATATCTTTAATTCTCTTTATGCAAATATTATAAAAAGTTGATATTTTGAAAATACACATTGAGACGAATCTAACAATATCTCACATGACTATGTTTTATCTTATGTACAAATCACCAACAATAATCAAAATAGAATATATGAATAGTGTAAAAAGTCCAAATGTTGCGAGTATTAAAAAACGGAGGAAGTAAGTTTTAATTTGTCAAAAAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAATCAGTGTTGACACTTAAAATCATCTAATGAGTTATTTGTAATTTCATATAAGAAAATATACTAGTGAATTAGTGGAATTAAGTTTAAATCATTAATAATCAGTTGGAAGCAGTTTAATTTTAAGTTCAATAGGAAAACCTCAGTTGATCAAGACACAAATCTGCGTCATCTTTTCTTATTGGGACTTGGGAGCAAGGAGGAAGAAGAGATGAGTGGTCTTCCAATCCGATAAAAAAATGTGAATCCCAATCACACAACTGATATAGTGGAGTAGTCAATGCCAATGGGAGGCAGCAAGTGAACTATCAAGTAGTACCCTTGTTAACGAGAAAATGAGTAATATAAGTCTTGGGCATATTCAAAATTGTTTCTATAATTGACTGCGGTTTAGAAATTTTACTTTTTTTTTCTTGGACTCCACATATTGTGTTGTTATTACTTTTGCACTAAGGGGATGGATACTTTAAAGTTGTATTTGATAGGCTTGTCAGCTTTTGGAGTTATTGCAGAAATTTGTGTGTATAACTGAGTAACTGACGTTCTTTGATTATACTTTCTTAGCCATTATTGAAGGTTATAGGTTAATTGATATTCACTTATTTAGGGATGGGCAATATATAATTATTTGATATAAAACTTTCATATCCAGAAAGACCAAAACACATTGACAAAGTGATGCAATGTTTAACAAAATAGTATTAACAATCTTCTATTCTTCTCCCCGGCTCTCTAAATTGAGTTTTACCATTGGAGATGAGTTTGACATGTGTATGTATTTATCATTTTGGCAGTTCTATGGCTTTGTTTCTCTTACACTTAAGACTTGAATATCATAAAAGATGTTTATCAGATGAAGATGTTTTAAGTTTAGTGAAAGATGGCATCTATGTAGTGTCTAGCGGGGCATTTTCAAAGAAGTCTAGAGGGATTGTGTTGAGGGAAGAGCTACACTTGTGAATAGTTTAGGTAAGGTAATTAGTGATGAGATCCAACTTGTTTTTTTGGGAGCTTCTTGAGGCTATGAGACTTCACAAGAAATTTTGGTACCCCAGGAATATTGTTGTAGCATGCAGTCCTCTTTTACACTTCACTGTAACATTAGGTACCTTCTATTCCCATGCAACTTTTTACTAGAGGTGGCAAATAGGTTAGTCAAGTAGAGTAATTTTGGTTTCGGTCATCGATATGTTGGGTTGTTTTTATTGTTGGCATTTTTCATTATTCAATTTGAAAGAAGAGAGAAGCTACACAATTATGTCCATTGGATAGAGAGTGACGAAGGAAAGGATAAAAGTGGGAGTCAAAAAGAAAAAAAAATTAGGTTCAAGTAATTTGACGACATTCTGAATGTGAAAGCCTGTCCCTCGAGGCAATCTAAAGTGGGCTTGTTTTAATCCGTTATCTTGCAAGTTTCTGGGGATTGGTACGTTTTGGTTGTGCAAATTGTAACTTATTTCAAAATTCAACTTTGTATGAGGTTGGGTGATTTTTTTTTTGTCTAGTCCTTACCCTTATTATTTTGGTTGTTTTCTTACCATTTCCTCCTTTTATTAACAACTTTTTCCCCTATCTCTTTATCTTAGAGCTTTTCTGAAAAGTTTGACCACCAGTTCACTTTACTTGGATATTATCAAACCTGTTGTAGACTCTTATTTTCATTTGTTTCGATCAAGTGCAATATCTCTGTCCACTCTCTTGTCTACATGGCATCATTTTTTGACGTAGAGTATCTTCAAAAAGTTTGGGAGCTTCTTTGTAGCACTTTTTATTGAAATAAAAAAATTACGCACAATCTCTCATATGAAAGGAAGATCATTTTTTTTATAGAAAGTACCTCATTCTACTAATAGGTCAAAGAAAATCCATATTTTCCACTAGGTCAAAAAGTTCCATATTTACCACTAGGTCTTTTCTAGGAAAGTTTCTTGCTGAATTTGAATTATTTACTTGGCGTTGGGTATGATGAGATCACCTCATATAATTATTCCTTTACACTTTGTTTGGATAAGCAATGTTGGAGAGAAAGGGAGGGAAGGGAAAGGGAGGCGAACACACTCCCTTGTTTGGATAAAAGGCTGGGGGAAGGAATTGGATGGATCCATTTTCCCTCTCTATTTAATAAACACCATCCTCCAATATTGGAAAGATTTTGAGGTAAATGGAGCTCACCTTCCCCCTCTCTTTCTTCCCCAGTTCCCCTTCCCCTCCCTCCTCTTTCTCTCCCCTTCCTTCCCTTCTATCTTGCTACCCAAACATACCGTTAATGATTGTGGTCTTCCTTAAAATAAAAGAATGTAGGCATTTGAATATCAAGGTGGAAGGGAAAGAGAGGGGAAAGGGGAGGGGGAACGTGTGCTTCATATTCCCTCCAAATCTCTCCAATTTTGGAGGGATGGTGTTCATTAAATAGGGAGGGAATATGGATTTCTCCCTCTCCCTCCCCTTCCTTGCCCAACCTTTTATCCAAACAAGGGAGTTTGTTTCCCTCCCTTACTCTCCATTTACTCTTATCCAAACAAAGTGTTAGAGATTATTATTATCAATTTCAGCTAGTTCGCTGACTATATCCACCTTATAAATCATAACTTGTTACATACAAGTGAATACTTTCCTGACTAACTAGGCAGCCCAACCAGGACATGCTACCTGCCAGAATATAGCTTTCTTATGGTAAGCTGCTGTAGACACCATATAGGACGCTCTGTGTTTATTTTGTATGTTCTTTATAGTCTGATCAAATTGTTTAGTTTACACTTACATTGATGCTTTACTAACCTTTGATTTTAGCAGTCATATTTTTTTATCGACATCTTTACATTTTAAACATCTGGTTAGTGGTTAAGGTTAAAATGAATCTTGGAAATTCTAAACCTTTCCATCTACTTGTGCCTTTTTCCTTTGGTAGACCACAGTTTTTTTTAAAACTTTACAACAACTAGGACAACCACAAAGCCTTAGTCCCAAAATGATTTGGGGTCATCTAACATGAATCGTCGTAAGGAACCGTTCCCGAAACGTGAAGCAAGACCCAGCTTAGTACCATGAATTTATTTTATGTTTTCCGTCAATATCCCCCTAACTACACCCTCCTCCCAGTCCTACCAAACCCATCGACTTTTTACTTTGATGATTGGATCATTGAAAGCGCAATCATAATCCTGTATTTCTAAGATATCTACAACCGTCTGCTACTCTTCTTTAATCCTCATTTATTGTTTGCGCTTTGAAGTTAGACTTCCCCATCAACTGTAGCATAATGCAGCAAAGTCTGTTGTTTTATGTTATTGTCAATTCTTGTTTCTTCATACGGTTGTGGAATAGTATTTTCCTATAATTTTTTTTGTACTCAATGGGACTTTCGTCTTACTTATAGGGTTACGGTTTGATTATAAATTGTAACTTTTTTTTGGGTACTCAATGTATGAGACTTTTCGTCCTATCTTTGAACTTCTATTAAACAAGGGGTTAAGGGTGGAGGGATAGCCGCCGTTGTGTATAAGGTTAGAAGATTTAGAGGGAGTTAAAAAATGATGGAGAAGTTGAAGGAAACTTGTGGATGTTGGTGGCTATTTTGTTGAACTTTAAAGAGTACAAATCTTCTTGGTATACCAAATTGAACTGTCAAAAGTGGAAGTAACATGTAGAATTTCAAAATTGATTTAAATTGTTTCTTAGGATTCTTAGTTTGTTACTCATGTATTGAAACATTTTTGCAGGGCGGTATACGAATTTACGTCTGTGACCATGAAACAGCACCCCCAGGTCTGCTTGGAACTTTTAAAATCAGCAAGTGTCATGACTTGCATAATGTTGACATACATTTACTTGGCTTCTCATATCTCTTACGAGCTTGTTGTTGGGAATTATTTGTGGGTGTAAAGTTTTCTGATAATAGTTTTTGTTTTCGGGTGATTTTCTCTTTGCCGCTTTCACTTGTTGTCTCCCAATTGTTGATCCTACTGACAATCATTCTAATGGCTAATTGGCATCAAGCGGGCTTCACAGATTAAATGTCAGGTCCTCAGTTTCTGTTAAAACGGTCATGTGGGACTTCAAAACCCTCATCCTTATAATTTACCCTTGTTTCCTGACTAGGTTCTTGTCAATTCGGCAATTCCTTGGTCATTAAATTGAGCTTACTCATCAAGTTTCAAATTTCAGCAGACTGCCTCCTTCCAATTCTTTCTTGTTTGGGATCTCCAATTCTCCATTGTAGTCTGATGTGTTTTGTAGTCTTTTGTTTCAGTCATGTCTCTCTGTGCTCTTTAATGGCGCTTTTCCTGACTTAGGCCTAATGAATATTAGACACTGTCGGCCATAATTTTTCTTTTTATGGGTTCTTTAAGAGAACTCTTGGTTCTCTTTTGGTGTACGACTCTTAGTTCTCATCATTATTTTTTCTATTTATCATCAATTTCTACTGTATAGAGTAGAGACCATTAACCAGGAAAGCCTTTCCCTTGTCTCCTATTTTGTACTGAAATACGTTGTATTGATTTTAACTGATGTTTTCTATTCGCTTAAGTGTTAAGTGTTTGTCCTATGAGTTACTTATTTTTACTCAGAAAAACTGAAATTTGCTGATTTAAATGAATTTTAAAGATCAAAATGATCCTATACTTGAAAGTTCTCTTTAAATTTTGAAGAGAGGATGCCAAAACCTGGAGTACTAATTAGTTATCGATAGTTTACCACATTGATTCATTTACTGGAACCAATATACGCTTATGTAGCTTAGGCTAATCTTACATGTGATATTTCTGTTCACCTTTGAATTGTACAATCTTCAGATCGATTGGAGTTTGCAATCTGAATTCTGATTTCTTCAATCAATATCTATTATGACTCATCAATTATTGACAGATGCAGGGTTGTGGTGCTCTTATTCTTTTCCATTTTATCAGTATTTTGGCTGACAGTTGTTTAAAACAAAAGAAAAATACGGAGTAGCAATTCTGTAATAAGGCTGTTAGATGGTGAATTAAGAGAAACAAGCGATGTAATCCTTTAAAATATTTCAGCGGTCCCATTTGTGGATTCTTGATCATTTTAGTATACAAACATTAGGCAGGGGAAGAGTTTTCCCGGAATAAGACATCCCAGGATACTTATTTCACTGATTATATGACTCAGTTACTGACCTACTGCTGTGAACTATGGTAAATTATTTCCTGATCATGTGTTTTGAATAATTTCATTCTGGTGATGCAGTGTTGCCTTGTAATGAAATTTTTTCACTTACAGTATTTTGTTAGCATTTGTGGGGGAGAGGAGGGGAGGGAAGAAGCAGGGAGGTCATGTGAGGAACGGAGGGTGCTTCAATTTTCATTTCAAGTCTTTCCAATAGTGGAAGAAATTGGTCTATTAAAAGGGAAAGAAAAATGGTGATTTTTATATCCTTTTCCTTACCCAAATATAGGGTTATATAGATCAGTCACTCTCGCTCCCCTCCCTTTCCCTCCAAATTCCCTCATCCAAACACACTATTAGAGAAGGGCATCAGTGATGCTAAGGAATCTTTACTTTTGCTATGTAAACCATGATACCTGCACAAATATTATTCTGATGTGTTTTGATTATCAGATTAATATATGGTCAGTAAATAAAACGAAGTAATGATTTACTTGAAAGAAACGTAAAGAAATTAAAAGATTTTGGTTTTTGGTACCCACATTTTTTTTAATTTTTTTTTTTAACGAGAACATATTGTATTCAAAAGTGGAGTGCTATTCAACCCCTTTCCTCAGAGAAGACAACTGGTAGATCCACTACACCCGTCACAGGACTGCTCTCCTAAGCATTAGAACCACCAACTGGTTATAAACACCTCCCTCTCCTCCTTTACCCCTCTCTCTTCCTCTCCTTCCTCTTACATACCTTTCTTCCTCCGGCTCTTACACAGAAACCATCAAACCAATGTCTGAATCTGGCTAATGAATTTGAATAGCCAAAAGAAGTTTTTCATTTAATTAAGTAATCCTGGTTTTTTCAAACTACAGAGCCCTACTTGGAGGCATGTGAACAGGTTAACTGCTAAAGGTAATTGACTCGAACATGGGGGTGGGATGGAAGTTACGAATTCCATTCAAGGGCTGTTCAGCCTATATTTGATGGTCTTCTTTATTGAGAATGTCCTGAACCTGTGCTAGTTACTCCTTTAACTTCTTTAAAAGCATTATGCTTGCAGATCTAATACTATCCTCCTCCATGACTGATATTAAAGAGTAACTAACAAGGAAGTGGTTCTTGAAATTTATTTATGCAGAGAACCAAGTAATAAAGACTGATCAGATGAACATATTGATCAGATCACTTACTTTGAAGAAGCAACAGGGTGAAGCGACTGATAACTCAAGAAAGAGGTGTTCTATCTCTTATCTTTTTAGCCTCTAGCCTAGTTATTTGTTATGTTGTGTACGCTTTGGTGATATTTTCAAGTTAGCTTGTTATTGCTTAAAATATCATGTTTTTTGTTTTTTTTGACGTGGTAATATTTATGAAATTTCATTTATCTTTCATTATATCCGTATACATGTTAAACCATGTTGGATAAAATTAATTGGTTGCATTGTTATCTTGTATTTGCAGAGCTGCTGACAGAGCTGCTGATGGAAGGGCTTCAGCTAAGAGGGCATCGACTAGTAGCCAGAATAGTGCTCGACAGGGTAAGTGGTGTTGGTTTGATTTTGGAGTTGTTATGTTCACCTGATGTTGGGTGGACATTTTTATCGTGTTGCACCTCAGTGTTTATCATTGTTTCGGGTTTACTGGATTATTGGATCATCCCAAATTCATTTCATGGTTAACTTTGGGGCATAGGTTGATAAATGAGGGTATGGAATAGGATCACAGATTCACAGTTGACTTCAGGAATTCCCTTAAACTTCTTCTCACCCACATAATGTCTACACTTTATTCCGGTCTACCTATTCATTCTATAATTTCCCTAACTCGTCTCATACTCCGATGTTCAGATAGGAGTATGACAATGTGCCAGGCTCTTGCTATGACAGTGTACTTTGACCATGAAACTTAAAGACACTTAGAGCATGTACATTGGTTGGCTCTTCAAAAGAGCTCTGGGAGGGCTCTCCACTGTTTCTCTACCAAATCTCTCTACAAGACACATTCAAGAATTCATTCATAAAAACACCAAACATTGGTTGGTTCCTCAAGTGAGCTCTCCAATCTCTTTTTTACCATTTGGTGGTCCATAATTAATTGTCTTTAACCAAAGTTATTATCCATTTTTTAAAGTTACTCCCCACTTTTCAACAAGAATCAACTCTTGGAGGGCTCTTGGCAAGACCTACCTTGAAGTAGCTCTCCATGAAGAGCTACTCAAGAGCCCCAATATTGGCCAAGAGATAGTTCTTGTTGGAGAGCTACTCGGAGAGCCACTCCAAGAGCCCCAATGTACATGCCCTTAGACCATGTTCATCCATATGAAGTTTCCTTGATAAAATTTATGCCCTGAAAGTTTCACAACCCGGGACAGTTTGTCAAAGAAACACAACCCTTTCATGAGTCATGACAAGTGATTCACAATCGGGATTCAGGAGTACCTATTTCCTACTGTCCATAACTCCTGACTTGACTCTAATCTCATACTTAGGGTTTTGAACACTGTCATATTTGCAGGTCTGAATTTAGGGTGCTTGTTTAAGTGTAATAGCCCTGAGTTTCCTTATTCACTTGAGCTCTGGATTTCTACTTGAGCTTTGGATTCACGTCAGTGCCCATGCAAGCATGTTAAAAACGCACCAAGCTCGTATGTTATCAATGATAATATCTCATGCATTTGTGTGCATTGGACCATCACGGACTGTGGAGTATGCATCAGTCACCAGTGTCGTTCCTTCTACACTTGGAGAAAACCACCTACCTAATTTTGGACTCTGGATGGTTACGCTACCGTTCAGATTTGCAATGCGCTATTTTGAACTCGGTTATCTCCCACTTGGTTCATAGGATTACTTAGTCCTTCCTGTGAATGCAGTCATCATGCAGCTTATGCTCATGGTCCCCTCAAGTAGAACCCGTTGAAGAGGATACCGATTATGATACATTTTGTTCTCATGGAAGGTCACATATGACCACTAATGCATAGTCAATTTTTGTCCTTCCACAGTTTGAAACTGTTGTGTTCATGATCATGGTAAACTGGTAAGAGAGCTGAGAATGACACAACTTACTTATTATGTCTGCCCAAATTAGGCTTTTATGGGTCCATGTCTTCTCATCTTGTGGGAACTCACCGATCTAATTTAATACGGAGGGTTGTTGAACCTCGGGATTTTTTGGGGGACAGAGATTCGTTAATATTATGACAGCTCAAGATTTTTTTTTTCCTTCTGATTTTGTTCAAGTTGCATGAGTATAGGTATGCTGAAAGTGTATACGTATTGGAATAATATTTTCTTTGTGTCTCTTAAATTGACAAAAAAGTATCAAAACAATTGGAAAGATACAAATGTTTGTCCAATTTATACTTTGTCTGAATTCAGTTAATAGCTAAGCAAGTTATTACAGCAGCAACCACAGACTGTTCCATTTTGTGTCGGCAATTTTAGGATGTCAGCGTAGAATTTGATAAACTTTAATCAAGGGAAGTAAAATATTGCAATTTAGGAATTTAGCAATGGAGGGACCTCCCCTGGGGTTCTGGGGGCGAGGGAATTGGGGGCTGATGAGGACACAGTGACTAGGTTTAGAAAATAACCTTTTGGAGATGGGTTTTTACATCTTCTTCTTCTATTTGTGTCCAAATTTTATTCTCAGACTGATCCCTTTTTGGAGTGAAACAAAGACCACCCCTTAGATTGAGGTTTTAGTCCTCTCTATCCTTTTCATATGATGTGTGATTATACCCTACATTGAAATTATGAAGTATGATATTAAACTTGTTTGTATCTCTTTGTTGTCTTCTCTTGGTGATTACTGATTAGTAGAGTGGTGCCCTAGTGGGGAGGTAGATGGAAAGCAAAAAGATGGATTCAAATGTGGCTATGTATTATGTTCAGTACTTCAATGGATCTTTTATTTATGTTATGCATGGGGGGCGGGGGGTAATTGGAAAGGAAAAAGTAAATACGGAGTACAATGTGATCTTAACACCAACATGAATTTACAAAAGTTTTCTGATCCAAAAGTTTTCATAGTTTTTAAGATTCAAAAGGTCTTGTGCGCACAAGGTGTACAATAAATTTATTGTACACCAAGATAACTTTAACCCTTTTTTTTGTAACTTTAACCTAGTTTTGATCAACTTTTATATTAGTAAAAAAAAAATTAATAGATAAATATTTTAAAGGGTTAAATGATTAATTTTATACATTATTAGTTAGTTTGAAGAAATAAGTTTTACTAAAATGAAAAAATTTATCCTAAAAAATAGATAACTTTTACATATATATGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTCCGGTGTACAATATTTATTGTATACCCATTGTAAATAAGAATTTGTGTTTAAGATTTACCTCAGTACGCAAATTCCATGAATTTGCAATGAAGCATATCTGATTTCTTACCTATCCATTGCAGGTGGGTCAAGTAGTCGTGCTGCAGATAAAAAATTTCAGGGTTTGACTGTGGAGAGGCTTCGTGCACTTCTGAAGGAAAAAGGACTTTCGCCAAAAGGGAAGAAGGCAAGTGAAGTTTCTTATTGCAATTCTCTCTAGTAAACTTTGCTCCATCGTAATTGTCTCACTTGCCTGATTTACAGCTGTCCTGCTTCTCCCTCTCCCGATTCTTTTTACTCCAACCCTCTAGGCTGACCAAAGCAATTTTCACTAGAACTTGGTACCGATTGATAAATGGGTCTCCTATTTTCTTTTACTTTAACCTTGTATTGTAGCCTTGGGCTTCTAACTAAATTGAGCAAGTTGCTTCTGTTGGGAAATTGGTCGTTGTCTTCTTTTGTGCATTACGGTGAGTTTGATCATCAGGTACTGATGAGTGAAGTTTGTCTGTTTATGTTATGCATGCTGAGATTGTCACCTTTTTTTTATGTAGGACGAGCTGATTGAACGCCTTCGGAATTCAAGTAAATGATTTAAATATGCTGATTAGAAGAGGGAAGTACGAACTGCTTATTGCAAAGATGAATACGCAGGTGCTAGACTGCCAGGGGAGTTCATGGACAGTGCAAATTTAATTTAATGAAGTTGGTCGTAGTTTACATTCTTGGTGTAGTATTTTGTTTATTTGGTGCATATATCTTGTATTACTGATGCTAGTGTAATGTCACAACTTTTGCCGGAGAGTCTACTAAATACAAAAACCTGTCCTTTGTTGGTCTTGCTCTGAGATATATATCTATCTATGCTTCCAGATTATGTCACTTTGTGACTACGTTTTTTTAACGTGTAGGCTTGCAACATCTGGTTTCAGATAGTACTGCTATGTATTGTTTGTGTAGTAGAAAGTAGAAACTACAATTTCTAAACTTCTGTTACTCTGTTAAATCTGGTCATAAATTGCACTGAAGTTGTATTATGCATTTTACAAAGAAAACCCATAGGAAGTTGTATGCATTTTGCAATGAAACCCTATAGGATGTTTATGGTATTGATACTGTCCCTGAGACACGGTCAAGAAATGCCATTACTAAGGTAATCTATGTTACTGACTGGTACGAGTCTATAAATTTATACCCTG

mRNA sequence

AAAAGAAACGGGGGCCTTGATTTACCGCGGTAACCCAAAAAATTCCCCGAAAGGGACAGTTTTACTGCCTTTCTCACTTGCTGCTAGCGCGCTGACGCTCGCCATATAGCTCTCATGCGGCTTCGTTATTACAAATCCAAGCCTCTAATACCGAAAGCACCGCCAATAAAAGTGTCTGCCATGGAAGAGGGTTCTTCTTCCGCATCTCAGCCGCCATCCGATTCCATTCCGACAACTAGTGGCACGGTTGCCGAGTTTCTCACCGACCTTCCATCTCGCGGCCTCTTCTCTTCCACCGCCGTTTCCTCTTCTAATCCGGGCGGTATACGAATTTACGTCTGTGACCATGAAACAGCACCCCCAGAGAACCAAGTAATAAAGACTGATCAGATGAACATATTGATCAGATCACTTACTTTGAAGAAGCAACAGGGTGAAGCGACTGATAACTCAAGAAAGAGAGCTGCTGACAGAGCTGCTGATGGAAGGGCTTCAGCTAAGAGGGCATCGACTAGTAGCCAGAATAGTGCTCGACAGGGTGGGTCAAGTAGTCGTGCTGCAGATAAAAAATTTCAGGGTTTGACTGTGGAGAGGCTTCGTGCACTTCTGAAGGAAAAAGGACTTTCGCCAAAAGGGAAGAAGGACGAGCTGATTGAACGCCTTCGGAATTCAAGTAAATGATTTAAATATGCTGATTAGAAGAGGGAAGTACGAACTGCTTATTGCAAAGATGAATACGCAGGTGCTAGACTGCCAGGGGAGTTCATGGACAGTGCAAATTTAATTTAATGAAGTTGGTCGTAGTTTACATTCTTGGTGTAGTATTTTGTTTATTTGGTGCATATATCTTGTATTACTGATGCTAGTGTAATGTCACAACTTTTGCCGGAGAGTCTACTAAATACAAAAACCTGTCCTTTGTTGGTCTTGCTCTGAGATATATATCTATCTATGCTTCCAGATTATGTCACTTTGTGACTACGTTTTTTTAACGTGTAGGCTTGCAACATCTGGTTTCAGATAGTACTGCTATGTATTGTTTGTGTAGTAGAAAGTAGAAACTACAATTTCTAAACTTCTGTTACTCTGTTAAATCTGGTCATAAATTGCACTGAAGTTGTATTATGCATTTTACAAAGAAAACCCATAGGAAGTTGTATGCATTTTGCAATGAAACCCTATAGGATGTTTATGGTATTGATACTGTCCCTGAGACACGGTCAAGAAATGCCATTACTAAGGTAATCTATGTTACTGACTGGTACGAGTCTATAAATTTATACCCTG

Coding sequence (CDS)

ATGCGGCTTCGTTATTACAAATCCAAGCCTCTAATACCGAAAGCACCGCCAATAAAAGTGTCTGCCATGGAAGAGGGTTCTTCTTCCGCATCTCAGCCGCCATCCGATTCCATTCCGACAACTAGTGGCACGGTTGCCGAGTTTCTCACCGACCTTCCATCTCGCGGCCTCTTCTCTTCCACCGCCGTTTCCTCTTCTAATCCGGGCGGTATACGAATTTACGTCTGTGACCATGAAACAGCACCCCCAGAGAACCAAGTAATAAAGACTGATCAGATGAACATATTGATCAGATCACTTACTTTGAAGAAGCAACAGGGTGAAGCGACTGATAACTCAAGAAAGAGAGCTGCTGACAGAGCTGCTGATGGAAGGGCTTCAGCTAAGAGGGCATCGACTAGTAGCCAGAATAGTGCTCGACAGGGTGGGTCAAGTAGTCGTGCTGCAGATAAAAAATTTCAGGGTTTGACTGTGGAGAGGCTTCGTGCACTTCTGAAGGAAAAAGGACTTTCGCCAAAAGGGAAGAAGGACGAGCTGATTGAACGCCTTCGGAATTCAAGTAAATGA

Protein sequence

MRLRYYKSKPLIPKAPPIKVSAMEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADRAADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNSSK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19752	Spo19752	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19752.1	Spo19752.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19752.1.exon.1	Spo19752.1.exon.1	exon
Spo19752.1.exon.2	Spo19752.1.exon.2	exon
Spo19752.1.exon.3	Spo19752.1.exon.3	exon
Spo19752.1.exon.4	Spo19752.1.exon.4	exon
Spo19752.1.exon.5	Spo19752.1.exon.5	exon
Spo19752.1.exon.6	Spo19752.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19752.1.utr5p.1	Spo19752.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19752.1.CDS.1	Spo19752.1.CDS.1	CDS
Spo19752.1.CDS.2	Spo19752.1.CDS.2	CDS
Spo19752.1.CDS.3	Spo19752.1.CDS.3	CDS
Spo19752.1.CDS.4	Spo19752.1.CDS.4	CDS
Spo19752.1.CDS.5	Spo19752.1.CDS.5	CDS
Spo19752.1.CDS.6	Spo19752.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19752.1.utr3p.1	Spo19752.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo19752.1 vs. NCBI nr
Match: gi|902171536|gb|KNA08010.1| (hypothetical protein SOVF_166540 [Spinacia oleracea])

HSP 1 Score: 340.1 bits (871), Expect = 2.400e-90
Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 1


		  
Query: 1   MRLRYYKSKPLIPKAPPIKVSAMEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSS 60
           MRLRYYKSKPLIPKAPPIKVSAMEEGSSSAS PPSDSIPTTSGTVAEFLTDLPSRGLFSS
Sbjct: 1   MRLRYYKSKPLIPKAPPIKVSAMEEGSSSASPPPSDSIPTTSGTVAEFLTDLPSRGLFSS 60

Query: 61  TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR 120
           TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR
Sbjct: 61  TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR 120

Query: 121 AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI 180
           AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI
Sbjct: 121 AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI 180

Query: 181 ERLRNSSK 189
           ERLRNSSK
Sbjct: 181 ERLRNSSK 188

[Close]

BLAST of Spo19752.1 vs. NCBI nr
Match: gi|731333742|ref|XP_010677887.1| (PREDICTED: uncharacterized protein LOC104893483 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 236.9 bits (603), Expect = 2.900e-59
Identity = 132/164 (80.49%), Postives = 145/164 (88.41%), Query Frame = 1


		  
Query: 23  MEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAP 82
           MEEGSSSAS PPSDS PT SG  A FLT+LPSRGLFSST VSS N GG+R+Y+CDHETAP
Sbjct: 3   MEEGSSSASPPPSDSNPTASGAAANFLTNLPSRGLFSST-VSSPNLGGMRVYICDHETAP 62

Query: 83  PENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADRAADGRASAKRASTSSQNSARQG 142
           PENQVIKTDQMNILIRSLTLKKQQ +  D+S+KRA+DR AD R  AKRA T+SQN+ARQG
Sbjct: 63  PENQVIKTDQMNILIRSLTLKKQQSDVADSSKKRASDRPADARTPAKRAMTNSQNNARQG 122

Query: 143 GSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNS 187
           GSSSRAAD+ FQGLTVERLRALLKEKGLS KGKKDELIERLR++
Sbjct: 123 GSSSRAADRNFQGLTVERLRALLKEKGLSLKGKKDELIERLRSA 165

[Close]

BLAST of Spo19752.1 vs. NCBI nr
Match: gi|731333740|ref|XP_010677886.1| (PREDICTED: uncharacterized protein LOC104893483 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 232.3 bits (591), Expect = 7.200e-58
Identity = 132/167 (79.04%), Postives = 145/167 (86.83%), Query Frame = 1


		  
Query: 23  MEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSN---PGGIRIYVCDHE 82
           MEEGSSSAS PPSDS PT SG  A FLT+LPSRGLFSST VSS N    GG+R+Y+CDHE
Sbjct: 3   MEEGSSSASPPPSDSNPTASGAAANFLTNLPSRGLFSST-VSSPNLLLQGGMRVYICDHE 62

Query: 83  TAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADRAADGRASAKRASTSSQNSA 142
           TAPPENQVIKTDQMNILIRSLTLKKQQ +  D+S+KRA+DR AD R  AKRA T+SQN+A
Sbjct: 63  TAPPENQVIKTDQMNILIRSLTLKKQQSDVADSSKKRASDRPADARTPAKRAMTNSQNNA 122

Query: 143 RQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNS 187
           RQGGSSSRAAD+ FQGLTVERLRALLKEKGLS KGKKDELIERLR++
Sbjct: 123 RQGGSSSRAADRNFQGLTVERLRALLKEKGLSLKGKKDELIERLRSA 168

[Close]

BLAST of Spo19752.1 vs. NCBI nr
Match: gi|694358006|ref|XP_009359441.1| (PREDICTED: uncharacterized protein LOC103950018 [Pyrus x bretschneideri])

HSP 1 Score: 171.0 bits (432), Expect = 2.000e-39
Identity = 106/171 (61.99%), Postives = 134/171 (78.36%), Query Frame = 1


		  
Query: 28  SSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPPENQV 87
           +S+SQPPSD+ PT SG  ++ L +LP RGLFSST V SSNPGG+R+YVC H+T+PP+ Q+
Sbjct: 3   ASSSQPPSDTNPTASGP-SKLLQNLPCRGLFSST-VLSSNPGGVRVYVCTHDTSPPDGQL 62

Query: 88  IKTDQMNILIRSLTLKKQQGE----------ATDNSRKRAADRAADGRASAKRASTSSQN 147
           I+T+Q NILIRSLTLKKQ+G+          A ++S+KR A+R  D +ASAK+A  +SQ 
Sbjct: 63  IQTNQQNILIRSLTLKKQKGDSSSKDAKSAGAAESSKKRPAERVLDSKASAKKA--TSQT 122

Query: 148 SARQGGSSSRAADKK-FQGLTVERLRALLKEKGLSPKGKKDELIERLRNSS 188
           S+RQ GSSS+A+  + FQGLTVERLRALLK KGLS KGKKDELI RLR+SS
Sbjct: 123 SSRQEGSSSQASSSRDFQGLTVERLRALLKAKGLSTKGKKDELIARLRSSS 169

[Close]

BLAST of Spo19752.1 vs. NCBI nr
Match: gi|225456305|ref|XP_002283714.1| (PREDICTED: uncharacterized protein LOC100264568 [Vitis vinifera])

HSP 1 Score: 169.5 bits (428), Expect = 5.700e-39
Identity = 100/169 (59.17%), Postives = 132/169 (78.11%), Query Frame = 1


		  
Query: 29  SASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPPENQVI 88
           + S  PS+S  T S   +++L +LPSRGLFSST +SS NPGG+R+Y+CDHET+PPE Q+I
Sbjct: 3   TTSSQPSNSNQTAS-EASKYLVNLPSRGLFSSTVISS-NPGGMRVYICDHETSPPEEQLI 62

Query: 89  KTDQMNILIRSLTLKKQQGE----------ATDNSRKRAADRAADGRASAKRASTSSQNS 148
           KT+Q NILIRSLTLKKQ+G+          A + S+KR A+RA D R+S+KRA T++Q+S
Sbjct: 63  KTNQTNILIRSLTLKKQKGDSSSKDVKGTTAAEVSKKRTAERALDSRSSSKRAMTNAQSS 122

Query: 149 ARQ--GGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRN 186
           +R+   GSS+R +D+ +Q LTVERLRALLKE+GLSPKGKKDELI RL++
Sbjct: 123 SRREGSGSSTRTSDRDYQSLTVERLRALLKERGLSPKGKKDELIARLKS 169

[Close]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QL74_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166540 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.700e-90
Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 1


		  
Query: 1   MRLRYYKSKPLIPKAPPIKVSAMEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSS 60
           MRLRYYKSKPLIPKAPPIKVSAMEEGSSSAS PPSDSIPTTSGTVAEFLTDLPSRGLFSS
Sbjct: 1   MRLRYYKSKPLIPKAPPIKVSAMEEGSSSASPPPSDSIPTTSGTVAEFLTDLPSRGLFSS 60

Query: 61  TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR 120
           TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR
Sbjct: 61  TAVSSSNPGGIRIYVCDHETAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADR 120

Query: 121 AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI 180
           AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI
Sbjct: 121 AADGRASAKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELI 180

Query: 181 ERLRNSSK 189
           ERLRNSSK
Sbjct: 181 ERLRNSSK 188

[Close]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CC92_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110330 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.000e-59
Identity = 132/164 (80.49%), Postives = 145/164 (88.41%), Query Frame = 1


		  
Query: 23  MEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAP 82
           MEEGSSSAS PPSDS PT SG  A FLT+LPSRGLFSST VSS N GG+R+Y+CDHETAP
Sbjct: 3   MEEGSSSASPPPSDSNPTASGAAANFLTNLPSRGLFSST-VSSPNLGGMRVYICDHETAP 62

Query: 83  PENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADRAADGRASAKRASTSSQNSARQG 142
           PENQVIKTDQMNILIRSLTLKKQQ +  D+S+KRA+DR AD R  AKRA T+SQN+ARQG
Sbjct: 63  PENQVIKTDQMNILIRSLTLKKQQSDVADSSKKRASDRPADARTPAKRAMTNSQNNARQG 122

Query: 143 GSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNS 187
           GSSSRAAD+ FQGLTVERLRALLKEKGLS KGKKDELIERLR++
Sbjct: 123 GSSSRAADRNFQGLTVERLRALLKEKGLSLKGKKDELIERLRSA 165

[Close]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F5J7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110330 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.000e-58
Identity = 132/167 (79.04%), Postives = 145/167 (86.83%), Query Frame = 1


		  
Query: 23  MEEGSSSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSN---PGGIRIYVCDHE 82
           MEEGSSSAS PPSDS PT SG  A FLT+LPSRGLFSST VSS N    GG+R+Y+CDHE
Sbjct: 3   MEEGSSSASPPPSDSNPTASGAAANFLTNLPSRGLFSST-VSSPNLLLQGGMRVYICDHE 62

Query: 83  TAPPENQVIKTDQMNILIRSLTLKKQQGEATDNSRKRAADRAADGRASAKRASTSSQNSA 142
           TAPPENQVIKTDQMNILIRSLTLKKQQ +  D+S+KRA+DR AD R  AKRA T+SQN+A
Sbjct: 63  TAPPENQVIKTDQMNILIRSLTLKKQQSDVADSSKKRASDRPADARTPAKRAMTNSQNNA 122

Query: 143 RQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNS 187
           RQGGSSSRAAD+ FQGLTVERLRALLKEKGLS KGKKDELIERLR++
Sbjct: 123 RQGGSSSRAADRNFQGLTVERLRALLKEKGLSLKGKKDELIERLRSA 168

[Close]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Match: D7SGX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01470 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.000e-39
Identity = 100/169 (59.17%), Postives = 132/169 (78.11%), Query Frame = 1


		  
Query: 29  SASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPPENQVI 88
           + S  PS+S  T S   +++L +LPSRGLFSST +SS NPGG+R+Y+CDHET+PPE Q+I
Sbjct: 3   TTSSQPSNSNQTAS-EASKYLVNLPSRGLFSSTVISS-NPGGMRVYICDHETSPPEEQLI 62

Query: 89  KTDQMNILIRSLTLKKQQGE----------ATDNSRKRAADRAADGRASAKRASTSSQNS 148
           KT+Q NILIRSLTLKKQ+G+          A + S+KR A+RA D R+S+KRA T++Q+S
Sbjct: 63  KTNQTNILIRSLTLKKQKGDSSSKDVKGTTAAEVSKKRTAERALDSRSSSKRAMTNAQSS 122

Query: 149 ARQ--GGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRN 186
           +R+   GSS+R +D+ +Q LTVERLRALLKE+GLSPKGKKDELI RL++
Sbjct: 123 SRREGSGSSTRTSDRDYQSLTVERLRALLKERGLSPKGKKDELIARLKS 169

[Close]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Match: R0GSH2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027268mg PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.300e-37
Identity = 101/169 (59.76%), Postives = 124/169 (73.37%), Query Frame = 1


		  
Query: 28  SSASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPPENQV 87
           +S+SQPP  S  T S    +FLTDLPSRG  SST VSS NPG +R+Y+C+H+T+PPE Q 
Sbjct: 3   ASSSQPPDSSDQTAS----KFLTDLPSRGFLSSTVVSS-NPGSLRVYICEHDTSPPEGQH 62

Query: 88  IKTDQMNILIRSLTLKKQQGE---------ATDNSRKRAADRAADGRASAKRASTSSQNS 147
           IKT+Q NILIRSL LKKQ+GE         A D  +KRAA+RA D R  AKRA+    N 
Sbjct: 63  IKTNQQNILIRSLLLKKQKGESSSKEAKGSAEDGPKKRAANRALDERNPAKRAA----NV 122

Query: 148 ARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNSS 188
           +RQ GSSSRA +K+FQ LTVE+LRALLKEKGL  KG+KDELI RL++++
Sbjct: 123 SRQEGSSSRAGEKEFQSLTVEKLRALLKEKGLPTKGRKDELIARLKSAN 162

[Close]

BLAST of Spo19752.1 vs. TAIR (Arabidopsis)
Match: AT5G63460.4 (SAP domain-containing protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.600e-36
Identity = 95/180 (52.78%), Postives = 126/180 (70.00%), Query Frame = 1


		  
Query: 29  SASQPPSDSIPTTSGTVAEFLTDLPSRGLFSSTAVSSSNPGGIRIYVCDHETAPP----- 88
           ++S  PSDS   +  T ++FL+DLPSRG  SST VSS NPG +R+Y+C+H+T+PP     
Sbjct: 3   ASSSQPSDS---SDQTASKFLSDLPSRGFLSSTVVSS-NPGSLRVYICEHDTSPPVIGSL 62

Query: 89  -------ENQVIKTDQMNILIRSLTLKKQQGE---------ATDNSRKRAADRAADGRAS 148
                  + Q+IKT+Q NILIRSL LKKQ+GE         A D  +KRAA+RA D R+S
Sbjct: 63  RIISFRIKGQLIKTNQQNILIRSLLLKKQKGESSSKDSKGTAEDGPKKRAANRALDDRSS 122

Query: 149 AKRASTSSQNSARQGGSSSRAADKKFQGLTVERLRALLKEKGLSPKGKKDELIERLRNSS 188
           AKRA+    N++RQ GSSSR  ++ FQ LTVE+LRA+LKEKGL  KG+KDELI RL++++
Sbjct: 123 AKRAA----NASRQEGSSSRTGERDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLKSAN 174

The following BLAST results are available for this feature:

BLAST of Spo19752.1 vs. NCBI nr
BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
BLAST of Spo19752.1 vs. ExPASy Swiss-Prot
BLAST of Spo19752.1 vs. TAIR (Arabidopsis)

BLAST of Spo19752.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902171536\|gb\|KNA08010.1\|	2.4e-90	99.4	hypothetical protein SOVF_1665...	[more]
gi\|731333742\|ref\|XP_010677887.1\|	2.9e-59	80.4	PREDICTED: uncharacterized pro...	[more]
gi\|731333740\|ref\|XP_010677886.1\|	7.2e-58	79.0	PREDICTED: uncharacterized pro...	[more]
gi\|694358006\|ref\|XP_009359441.1\|	2.0e-39	61.9	PREDICTED: uncharacterized pro...	[more]
gi\|225456305\|ref\|XP_002283714.1\|	5.7e-39	59.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo19752.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QL74_SPIOL	1.7e-90	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8CC92_BETVU	2.0e-59	80.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8F5J7_BETVU	5.0e-58	79.0	Uncharacterized protein OS=Bet...	[more]
D7SGX8_VITVI	4.0e-39	59.1	Putative uncharacterized prote...	[more]
R0GSH2_9BRAS	6.3e-37	59.7	Uncharacterized protein OS=Cap...	[more]

BLAST of Spo19752.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo19752.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G63460.4	1.6e-36	52.7	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	GENE3D	1.10.720.30		coord: 153..185 score: 6.1
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 153..185 score: 1.
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 153..187 score: 1.
IPR003034	SAP domain	PROFILE	PS50800	SAP	coord: 153..187 score: 11
IPR018276	Ubiquitin ligase, Det1/DDB1-complexing	PFAM	PF10172	DDA1	coord: 47..105 score: 1.1
None	No IPR available	unknown	SSF68906	SAP domain	coord: 150..185 score: 5.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding