Spo19930.1 (mRNA) | SpinachBase

Overview


Name	Spo19930.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Autophagy-related protein
Location	SpoScf_01183 : 153775 .. 156530 (+)
Sequence length	969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCTTCAAATAGACAAATTAATACTTCAATTGTTTAAGGAGTAATCCCAAACACCAAGGCAAAGAATTGGGAATACCTTGACTACCACGACAATCCAACAAACAATCCCCTTAAATCCTTAATTACACCGCAAATTCCCTAATCCTTAATCCTATCCTTTTATTCTTCCCTATTAAAATTAATTAAATAAAATAAATAAATAAAAAGATCAAACCACGAAATTTCCATATAAATATCCACAAAACCCTTTTCCAATCCTTTTGATTACTCTTTTTGATTGCGACGTCCCACATAGAGTTCTTCATTCAAAAGCTGTTCCAATCGCAAATTCTTCCCTTTTCTTGTTCTGGGTAATTTTCAATTTTTATAATTGATGTTCTTTGGATTATTTGATTGTTGATACTTCTTTGTAAATGTCTTTGAATTACTTTATGTTGATATTTTTCCTACTTTTGTTTGATCTTTTTGCAGATATCAATTCGACACCTTTGAGTGCTAATATGGCTAAAAACTCGTTCAAATTCGAGCACCCTCTTGGTTTGTTTACAATTCATTGATTTGGGGTTTTTCTTCTTCCTTAAAATTTTGGTGTTTTTGGTGTAATTTGAATGTTTTATGATGTGTTGTGATCATTTTTAGTGAATTATGCATCTGGGTAGTTTCTATTTATGAATGTTGGTAGCAATTATGTTCAATTATGTCTTAGTTATTGTATTAAATACATAATTGGATTAGGGTTTTGATTACAAAGATAAATTTCTTGCACTTTAACAAAATGTAGTCAAGATCTTCTTGTTTGATGGATTGTTGTGGGATTGGGAGTTATGGTTGATGATGCCCTGCCTCTTGTATTATTTCATAAATGAACCTGATTTTGGGGCTTTCTTTGGTAATGAATGGTGGTGGAATGTTTACTTGAATATGACTGATTCCTTGCGCAAATTCGGTACGAAATCTGAGTATATACTTAAGGAATAAGATAAACAATACTGAATTTGCCCTTTTCTTGAAGGAATGTCCTTAAATAAATATAGAGGTATGATGAATATACTGTTTGAATTGACATTGATGAATTACATTCATAAGTCTTGTAAACTTTGGAAAGACAGGAGTTAAGATTTTCAATTGAAATTAGGCAGCTTGCTTATTTGATGAACACATTTCCTCTGCTTTTTTCACCGGGGTTTGCACGTTAGTGTAAAGTTTTTCAAGGTTATTTATGTTGCTTGGAAAAGTTTGAGATGAATGTGTTATCTGATGTGTATACTGAAGGTTACTGCTTCTTTCAAACAATGTTAAAAATATGTGGTGTAGCCTTAATTACTTCCATGTTTGATGTACTAAATTAGTCAATCTATTAGATTGTAACGTTGTTCTCCATTACGACTCCTGTTTTTCTCTTGAGAATGTAAGCACGAATTGAAGCCCGTTTTTTTTGTATCTTTCCAGAAAAGAGACAAGCAGAATCTTCTCGTATCAGGGAGAAATATCCTGATAGAATTCCTGTAAGACATTTTTGTTTGCTGAATTGATTCTGATTATAACAAGACAAGCAGTTTTGGGGTATGATATTTTCTCAACTTCTTGAGAAATTCTCACCTAGTTGACCAATTTGTGCAGGTGATTGTGGAGAGGGCTGAAAAGACTGATATTCCCGACATTGATAAGAAAAAGTTAGTCCCATTTCTGGCAGTTCCTTAATTGCAGCCCCCATTATTTAACGCGGATTAGTTCTAAAACTATGGTGTTTTAGTTTAGATAGAACAAAGAAGTGCACTTTTTCTCAAATTTAGAAAGATTTATCTAGCTAGTGATTTATGTCAGAAATCCCTAATCTTGTAAATTCTTGCAGGTACCTCGTCCCAGCTGATTTGACCGTTGGTCAGTTTGTGTATGTGGTGAGGAAGAGAGTGAATCTGAGTGCCGAGAAAGCCATCTTCGTATTTGTCAAAAACATTTTACCTCCCACTGGTAAGTTGGAATGATATAGGCTCTGTTTGTTTCAACGGAAAACATTTTGAAAGGAAAATGATTTTCCATGGAAAATAATTTTGCCAAATAATTTTCAAGGGAACATATCAAGTGTAAATAGTTTTCCTTTGTTTGTTTCCTTTCAAAAAAAACATAGAAGTGAAAATGAGAGGAGAAAAGGGAAGTTGGTTTCCCTTAGAGAAAAGTTGTTTTCTGCCATTGGGAAAATTGCTTTCCACGTTTAACAAAACAAACAAAGGAAATGAAAGGTGTTTTCCGCCAAAACAAACAGAGCCTTAGTATTGAAATTGTTATGCAAATTTTTGTTTCTGAAAATGTTTGCAACTTTGGTTGTTTGGTTTTGCTACAGCCGCTTTACTGTCAACAATTTACGAGGACAATAAGGATGAAGATGGGTTTCTTTACATGACTTACAGCGGCGAGAATGTGTTCGGATTGAGGTGCACTACTTACTGATGCGTGCGTAAATAAGCATGGACTCATTCATGGTTGACATAAACTAGAAATGTAAATGTTCTGATGCTCATAATAACTATCATACTACTGTTTCTTAGAATCTCAATTTGTGTTGCTAACAATCAGTCTTGATTCTGTTTATATAATTAACTACATATTTTGAAGATGTTGGTTGTTCAGATTGCGTATTAACTACATATTTCTCTTTAGTTTGATGCTTTGTTGCTAATCATGTTCATCTTTTTGTATAATACTCTGTTCCTTTACATGCTAAAGAGTAAAGACGTACTACCACCGTTTTAAAAC

mRNA sequence

AAAGCTTCAAATAGACAAATTAATACTTCAATTGTTTAAGGAGTAATCCCAAACACCAAGGCAAAGAATTGGGAATACCTTGACTACCACGACAATCCAACAAACAATCCCCTTAAATCCTTAATTACACCGCAAATTCCCTAATCCTTAATCCTATCCTTTTATTCTTCCCTATTAAAATTAATTAAATAAAATAAATAAATAAAAAGATCAAACCACGAAATTTCCATATAAATATCCACAAAACCCTTTTCCAATCCTTTTGATTACTCTTTTTGATTGCGACGTCCCACATAGAGTTCTTCATTCAAAAGCTGTTCCAATCGCAAATTCTTCCCTTTTCTTGTTCTGGATATCAATTCGACACCTTTGAGTGCTAATATGGCTAAAAACTCGTTCAAATTCGAGCACCCTCTTGAAAAGAGACAAGCAGAATCTTCTCGTATCAGGGAGAAATATCCTGATAGAATTCCTGTGATTGTGGAGAGGGCTGAAAAGACTGATATTCCCGACATTGATAAGAAAAAGTACCTCGTCCCAGCTGATTTGACCGTTGCCGCTTTACTGTCAACAATTTACGAGGACAATAAGGATGAAGATGGGTTTCTTTACATGACTTACAGCGGCGAGAATGTGTTCGGATTGAGGTGCACTACTTACTGATGCGTGCGTAAATAAGCATGGACTCATTCATGGTTGACATAAACTAGAAATGTAAATGTTCTGATGCTCATAATAACTATCATACTACTGTTTCTTAGAATCTCAATTTGTGTTGCTAACAATCAGTCTTGATTCTGTTTATATAATTAACTACATATTTTGAAGATGTTGGTTGTTCAGATTGCGTATTAACTACATATTTCTCTTTAGTTTGATGCTTTGTTGCTAATCATGTTCATCTTTTTGTATAATACTCTGTTCCTTTACATGCTAAAGAGTAAAGACGTACTACCACCGTTTTAAAAC

Coding sequence (CDS)

ATGGCTAAAAACTCGTTCAAATTCGAGCACCCTCTTGAAAAGAGACAAGCAGAATCTTCTCGTATCAGGGAGAAATATCCTGATAGAATTCCTGTGATTGTGGAGAGGGCTGAAAAGACTGATATTCCCGACATTGATAAGAAAAAGTACCTCGTCCCAGCTGATTTGACCGTTGCCGCTTTACTGTCAACAATTTACGAGGACAATAAGGATGAAGATGGGTTTCTTTACATGACTTACAGCGGCGAGAATGTGTTCGGATTGAGGTGCACTACTTACTGA

Protein sequence

MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTVAALLSTIYEDNKDEDGFLYMTYSGENVFGLRCTTY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19930	Spo19930	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19930.1	Spo19930.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19930.1.exon.1	Spo19930.1.exon.1	exon
Spo19930.1.exon.2	Spo19930.1.exon.2	exon
Spo19930.1.exon.3	Spo19930.1.exon.3	exon
Spo19930.1.exon.4	Spo19930.1.exon.4	exon
Spo19930.1.exon.5	Spo19930.1.exon.5	exon
Spo19930.1.exon.6	Spo19930.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19930.1.utr5p.1	Spo19930.1.utr5p.1	five_prime_UTR
Spo19930.1.utr5p.2	Spo19930.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19930.1.CDS.1	Spo19930.1.CDS.1	CDS
Spo19930.1.CDS.2	Spo19930.1.CDS.2	CDS
Spo19930.1.CDS.3	Spo19930.1.CDS.3	CDS
Spo19930.1.CDS.4	Spo19930.1.CDS.4	CDS
Spo19930.1.CDS.5	Spo19930.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19930.1.utr3p.1	Spo19930.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo19930.1 vs. NCBI nr
Match: gi|902206248|gb|KNA15418.1| (hypothetical protein SOVF_098410 [Spinacia oleracea])

HSP 1 Score: 172.6 bits (436), Expect = 3.300e-40
Identity = 93/123 (75.61%), Postives = 93/123 (75.61%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 94
                                       AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC
Sbjct: 61  FVYVVRKRVNLSAEKAIFVFVKNILPPTAALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 120

[Close]

BLAST of Spo19930.1 vs. NCBI nr
Match: gi|731351047|ref|XP_010686829.1| (PREDICTED: autophagy-related protein 8C-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 156.8 bits (395), Expect = 1.900e-35
Identity = 83/120 (69.17%), Postives = 90/120 (75.00%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFKFEHPLEKRQAE++RIREKYPDRIPVIVE+AEK+DIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKFEHPLEKRQAEAARIREKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 91
                                       AAL+STIYE+NKDEDGFLYMTYSGENVFGLRC
Sbjct: 61  FVYVVRKRVNLSPEKAIFVFVKNILPPTAALMSTIYEENKDEDGFLYMTYSGENVFGLRC 120

[Close]

BLAST of Spo19930.1 vs. NCBI nr
Match: gi|502083295|ref|XP_004487416.1| (PREDICTED: autophagy-related protein 8C [Cicer arietinum])

HSP 1 Score: 147.1 bits (370), Expect = 1.500e-32
Identity = 77/120 (64.17%), Postives = 86/120 (71.67%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK EHPLE+RQAE++RIREKYPDRIPVIVERAEK+D+PDIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 91
                                       AA++S IYE+NKDEDGFLYMTYSGEN FGL C
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLGC 120

[Close]

BLAST of Spo19930.1 vs. NCBI nr
Match: gi|661885613|emb|CDP10793.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 145.6 bits (366), Expect = 4.400e-32
Identity = 78/117 (66.67%), Postives = 84/117 (71.79%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK EHPLE+RQAE+SRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKLEHPLERRQAEASRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AA++S IYE+NKDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. NCBI nr
Match: gi|802588365|ref|XP_012070847.1| (PREDICTED: autophagy-related protein 8c [Jatropha curcas])

HSP 1 Score: 145.2 bits (365), Expect = 5.700e-32
Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA +SFKFEHPLE+RQAES+RIREKYPDRIPVIVERAE++DIPDIDKKKYLVPADLTV  
Sbjct: 1   MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AA++S IYE+NKDEDGFLYMTYSGEN FGL
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGL 118

[Close]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7B0_SPIOL (Autophagy-related protein OS=Spinacia oleracea GN=SOVF_098410 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.300e-40
Identity = 93/123 (75.61%), Postives = 93/123 (75.61%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 94
                                       AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC
Sbjct: 61  FVYVVRKRVNLSAEKAIFVFVKNILPPTAALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 120

[Close]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVZ0_BETVU (Autophagy-related protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186120 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.300e-35
Identity = 83/120 (69.17%), Postives = 90/120 (75.00%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFKFEHPLEKRQAE++RIREKYPDRIPVIVE+AEK+DIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKFEHPLEKRQAEAARIREKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGLRC 91
                                       AAL+STIYE+NKDEDGFLYMTYSGENVFGLRC
Sbjct: 61  FVYVVRKRVNLSPEKAIFVFVKNILPPTAALMSTIYEENKDEDGFLYMTYSGENVFGLRC 120

[Close]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Match: A0A068UT49_COFCA (Autophagy-related protein OS=Coffea canephora GN=GSCOC_T00031664001 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.000e-32
Identity = 78/117 (66.67%), Postives = 84/117 (71.79%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK EHPLE+RQAE+SRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKLEHPLERRQAEASRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AA++S IYE+NKDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Match: A0A164VAX0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022570 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 6.800e-32
Identity = 77/117 (65.81%), Postives = 84/117 (71.79%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAKNSFK EHPLE+RQAE++RIREKYPDRIPVIVE+AEKTDIPDIDKKKYLVPADLTV  
Sbjct: 1   MAKNSFKSEHPLERRQAEAARIREKYPDRIPVIVEKAEKTDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AA++S IYE+NKDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Match: K4Q337_PETHY (Autophagy-related protein OS=Petunia hybrida GN=PhATG8a PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 6.800e-32
Identity = 79/117 (67.52%), Postives = 83/117 (70.94%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK EHPLE+RQAESSRIREKYPDRIPVIVERAEK+DI DIDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKLEHPLERRQAESSRIREKYPDRIPVIVERAEKSDISDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AAL+S IYEDNKDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRINLSAEKAIFVFVKNILPPTAALMSAIYEDNKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.000e-33
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA++SFK EHPLE+RQAE++RIREKYPDRIPVIVE+AE++DIPDIDKKKYLVPADLTV  
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AAL+S IYE+NKDEDGFLYMTYSGEN FGL
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118

[Close]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 3.000e-33
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA++SFK EHPLE+RQAE++RIREKYPDRIPVIVE+AE++DIPDIDKKKYLVPADLTV  
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AAL+S IYE+NKDEDGFLYMTYSGEN FGL
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118

[Close]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.300e-32
Identity = 73/118 (61.86%), Postives = 83/118 (70.34%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA +SFK EHPLE+RQ ESSRIREKYPDRIPVIVERAE++D+P+IDKKKYLVPADLTV  
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AA++S IY++NKDEDGFLYMTYSGEN FGL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFGL 118

[Close]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.300e-31
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA +SFK EHPLEKRQAE++RIREKYPDRIPVIVERAEK+D+PDID+KKYLVPADLTV  
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AA++S IYE++KDEDGFLYM+YSGEN FG+
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGI 118

[Close]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.700e-31
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA+ SFK EHPLE+RQAES+RIREKY DRIPVIVE+A+KTD+P+IDKKKYLVPADLTV  
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       A+L+S IYE+NKDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Match: AT1G62040.2 (Ubiquitin-like superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 1.900e-33
Identity = 73/118 (61.86%), Postives = 83/118 (70.34%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MA +SFK EHPLE+RQ ESSRIREKYPDRIPVIVERAE++D+P+IDKKKYLVPADLTV  
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                                       AA++S IY++NKDEDGFLYMTYSGEN FGL
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFGL 132

[Close]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Match: AT4G21980.2 (Ubiquitin-like superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.100e-30
Identity = 70/117 (59.83%), Postives = 80/117 (68.38%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK  +PLE R +ESSRIREKYPDRIPVIVE+A ++D+PDIDKKKYLVPADLTV  
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AAL+S IYE++KDEDGFLYMTYSGEN FG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Match: AT4G16520.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 1.900e-30
Identity = 69/117 (58.97%), Postives = 81/117 (69.23%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           MAK+SFK EH LEKR+AE++RIREKYPDRIPVIVE+AEK+DIP IDKKKYLVPADLTV  
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                        AL+S++YE+ KD+DGFLY+TYSGEN FG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Match: AT4G04620.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 2.800e-29
Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = 1


		  
Query: 1   MAKNSFKFEHPLEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV-- 60
           M KNSFK  +PLE R AES+RIR KYP+R+PVIVE+A ++D+PDIDKKKYLVPADLT+  
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  ----------------------------AALLSTIYEDNKDEDGFLYMTYSGENVFG 88
                                       AAL+S IYE++KDEDGFLYMTYSGEN FG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Match: AT2G05630.2 (Ubiquitin-like superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 6.900e-28
Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 1


		  
Query: 12  LEKRQAESSRIREKYPDRIPVIVERAEKTDIPDIDKKKYLVPADLTV------------- 71
           L+KRQAE++RIREKYPDRIPVIVERAEK+D+PDID+KKYLVPADLTV             
Sbjct: 56  LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115

Query: 72  -----------------AALLSTIYEDNKDEDGFLYMTYSGENVFGL 89
                            AA++S IYE++KDEDGFLYM+YSGEN FG+
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGI 162

The following BLAST results are available for this feature:

BLAST of Spo19930.1 vs. NCBI nr
BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
BLAST of Spo19930.1 vs. TAIR (Arabidopsis)

BLAST of Spo19930.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902206248\|gb\|KNA15418.1\|	3.3e-40	75.6	hypothetical protein SOVF_0984...	[more]
gi\|731351047\|ref\|XP_010686829.1\|	1.9e-35	69.1	PREDICTED: autophagy-related p...	[more]
gi\|502083295\|ref\|XP_004487416.1\|	1.5e-32	64.1	PREDICTED: autophagy-related p...	[more]
gi\|661885613\|emb\|CDP10793.1\|	4.4e-32	66.6	unnamed protein product [Coffe...	[more]
gi\|802588365\|ref\|XP_012070847.1\|	5.7e-32	65.2	PREDICTED: autophagy-related p...	[more]

BLAST of Spo19930.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R7B0_SPIOL	2.3e-40	75.6	Autophagy-related protein OS=S...	[more]
A0A0J8BVZ0_BETVU	1.3e-35	69.1	Autophagy-related protein OS=B...	[more]
A0A068UT49_COFCA	3.0e-32	66.6	Autophagy-related protein OS=C...	[more]
A0A164VAX0_DAUCA	6.8e-32	65.8	Uncharacterized protein OS=Dau...	[more]
K4Q337_PETHY	6.8e-32	67.5	Autophagy-related protein OS=P...	[more]

BLAST of Spo19930.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATG8C_ORYSJ	3.0e-33	63.5	Autophagy-related protein 8C O...	[more]
ATG8C_ORYSI	3.0e-33	63.5	Autophagy-related protein 8C O...	[more]
ATG8C_ARATH	3.3e-32	61.8	Autophagy-related protein 8c O...	[more]
ATG8D_ARATH	1.3e-31	61.0	Autophagy-related protein 8d O...	[more]
ATG8A_ORYSI	1.7e-31	61.5	Autophagy-related protein 8A O...	[more]

BLAST of Spo19930.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G62040.2	1.9e-33	61.8	Ubiquitin-like superfamily pro...	[more]
AT4G21980.2	1.1e-30	59.8	Ubiquitin-like superfamily pro...	[more]
AT4G16520.1	1.9e-30	58.9	Ubiquitin-like superfamily pro...	[more]
AT4G04620.1	2.8e-29	56.4	Ubiquitin-like superfamily pro...	[more]
AT2G05630.2	6.9e-28	58.8	Ubiquitin-like superfamily pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..88 score: 2.1
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..64 score: 3.0
None	No IPR available	GENE3D	3.10.20.90		coord: 3..62 score: 2.9E-24coord: 63..87 score: 4.0
None	No IPR available	PANTHER	PTHR10969:SF43	AUTOPHAGY-RELATED PROTEIN 8A-RELATED	coord: 1..88 score: 2.1