Spo19958.1 (mRNA) | SpinachBase

Overview


Name	Spo19958.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Oxidoreductase/transition metal ion-binding protein
Location	Super_scaffold_217 : 781728 .. 785665 (+)
Sequence length	1058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATTAGATTCTTCATTAACAAATGGTTTAAGGACAATTTAATGGATTTTATTAAGTGACTTGACCCATCCCGAAATTCTCAATAAACCCCAACTGCCGTTTTATCCTTCCCACTTTTCATAGTGCTCCCCTCTACTCTCTCCTTCCACAAAAGGTAATTTCCGCGCTCATTTCTGGTTGAATTCTGTTGTTAATTTCCCTATGTTTCTTTTATCTTTGCTGAAAACCTTTGTAATTATGCATGTATGCATGTATGGTTGATAAATTTCTGATTATGTTTTCGAATTTGTTATTTGTGTACTTTTGACTAAAATTAGTTAAGAAGAGTATGAATTTATGCACTCTTAGACTATATCTGGGTTTTGGTTGTCCATTAAACTAATAAAACCCCATTTAATAGAGAAGTGTTGTGTATTTAGAGAGAGAAAGCGGGAGGCGAAAAGCAGGGTACATGGTATAACCCTCTTTATTTGATTGAGTTTCTTTTATACAAATTGAGCAAATACCCAATTCAAATCTCCTAAGAATACCCCTACCCACAAAAATTTGATACATTTGTTGTTGAGTTTGATGAGAATTTAGCTTGAATATTTATTTGTAATTGAAGATTAGTTGGTATAACAGTGAGGTTTTGTTCTCTGAAATTAATCAAATTTGAGATTAGTTAGTGTATAGAGGAATGGTATTGTAGTACTAAGACGATTTCTGAGTATGGGATAAAATGAGCTAGACTTTTCATGCTTAAGTTTGAACTTCAATTTAGTGTATTTTGTTGTTTGAATTGACAGCATGAAATTGATTGGGTAATTTGGGTAGCATTTGGGCTTTAATGTTGTGTTCCGTTGTTGTGTGTGATTTCATGCAGCAGTGAGTGATAAAAGTTCCAATGCTTGGTTGTTCGGGTTAATACGAAGATAACTTCTTTGTGAGTTCTTGGACTATAGAGTTCGTGATCATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAGTAAGATGTTTTTCTTAAAATGGTTAATGTATATAGCTTATAGTGTATGTTATACTGGGTGAATTTAGCTGATTAATCATTGTAGGGTTAACTAGTGAACGGGAAATAGTTCTAAGTGATAATTTTCAGATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAGTAAGTTCTGGCTTCCATCTTTGAAATTCGTGGCATCTGCTTATTAGTGACTGTTGGTGTTTTTTGAAGTGTATTATCTACACACAAATACATAGAAAGGGGAGTATCTAAAAATGAGTAAAATGTGTAATTACTAAGTCCGTAGACTGTGGAAACTATCAGATTGTAGGTGTAAGTCCGATCTGAATGTGCTGAGTCTGCCCCTTTTTGTTTTCCCTTGATTTGAGATAATTACTGGTAATCACATAACAATATTAGCTTTAGCTTTTGGTTATTAGTTTATTTCTCCTTCCATCTTTTAAAGTTCCTCCCCTTTATCCCGTTTATCGAATTGGTGTTTCTTTTTGTTCTTCCCATTTGGAAATCTATTTCATTTATGGCAAATAATTCTCCCTAAACTACTCTCACCCTAAAGTTCTAATTCCAACTCTATCCCACCTTTAATCCCCTAACCTACCTCACTTGCATTCTTTTTTAATACTTTCTCTCAGCTTCAATTACTGCCAAAGTACAATCTTTTGTTTTTTAAATACTTTTTATCCCCTTCAAGCAATGCAAAGTACAATGTTTTTGTTTTTAAAATAATTTCTCCCTCTTTCAATCATTGCAAGATTCATATTTTCTTAATTCCCTCCCTGATTGCAAATCTGAATATTATGGAACAGAGGGAGTAGTAATTTAGTATTGCCAATTTGCTTTTGGTTTTCTTGGATCTTTGAGTCCTTAAGATAATTCTGATCATACCTTAAAAAAGGCTGAAAGGTGCCTTCTGTTGCTATCTTGTTTTGTACGATAATGTCACTGTTTATGGAATAATAAAATGTTTTTAATTTGAGTGATTTGTTTTTGCTTCTTTTGGTGGTTTGCAGATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTAAGTCACTATTCTTCAAAAATTAGGATATACTTCATATGATGCTAAATGAATCAAATTTAATTGAACATAGGGTATAAAGTTAAAATAATATCACATACCCTTGCTGGCTTACAGGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGGTAATGCTTTTCTTCACAAGTTTGTTCTTAGATGTAGTATCGAAAATTTGGAGATAAGGTATTGTTGAGCTTTGGCCCATATTTAGCAGATATACTTCTGCAAAAAATTGATGGTTCGGTAGTTCCTCATACTATTCTTTTCATCTATGATTGGACTACAAGTGAATGAGTGATTGTGCAACCTCTTAGTCCTATTGTTTTGGGGTGTATGTATACAAATTAGCACGATCATTTAGCTGCCTGAACTATCTGATAATGTTTATGCTCCTGGTTATTCTATGAATTCTCTGGTTAATGAACTTATGAACATCAGACAACATTTCATTGATTCGTGCATTGGAAAGGTATCTTTTTTTTGTATAATCAGCTCAATGCAATTAATCATCAAGTAGAAAGAAGGGGAGGAAACCAAGCCATCAAATAAATTGAATTTCTGTTGTTTCGGATTTCTTTATCTTTTGGCTGAAAGGTTTTGTTACTTGCTGAACCAGCTCAAGCCTAAAGGTCTTACCTATTTCCTTTCCTATATTTATGTATCAATATTAGCTTTTCTGGGATAAGAAGAAGTTGACAGTACCAAATCTATATGAAGATTAGATGTTTATGCTAGATTAATTTTCCATTAGACGAGGTTGGAAGAGAACTTGTGAAGAAGTGACACCATAAAAAAGCTAATTGCACTGCTCTACCTCACCCCTTTACGAGCATCCTATTTGTACATCATTTATTTCTGAGTAAAGAAATTACGTCCTTGGATTGTCATGTATTATCACGATTACTTTCTAAAGCAAAAGCATTCTGTGATTTGATGTAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGTATGGAGTTCAATTTGAAATGAAAGTGATTTTTGCTTTGGTGACAATTTTTGGCTTCCAATTCACAGTTTCTTATTAACAAGTATTGGCCGTAAAAAGAAATGGTCAGGGTAACAAGTATTTTTCCCTTGATTTTGATTTTGACTTTGGTTTGGTAGTTACATAATGCAAGACAATAGTGTATGTATGGTTTGTTTCATTGCTCTTATTTATTTGATATATGATATATGGTGTCAGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

mRNA sequence

GAGATTAGATTCTTCATTAACAAATGGTTTAAGGACAATTTAATGGATTTTATTAAGTGACTTGACCCATCCCGAAATTCTCAATAAACCCCAACTGCCGTTTTATCCTTCCCACTTTTCATAGTGCTCCCCTCTACTCTCTCCTTCCACAAAAGTGAGTGATAAAAGTTCCAATGCTTGGTTGTTCGGGTTAATACGAAGATAACTTCTTTGTGAGTTCTTGGACTATAGAGTTCGTGATCATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

Coding sequence (CDS)

ATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

Protein sequence

MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWVDIGTSESLLLDVLLNALTQISSE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo19958	Spo19958	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo19958.1	Spo19958.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19958.1.exon.1	Spo19958.1.exon.1	exon
Spo19958.1.exon.2	Spo19958.1.exon.2	exon
Spo19958.1.exon.3	Spo19958.1.exon.3	exon
Spo19958.1.exon.4	Spo19958.1.exon.4	exon
Spo19958.1.exon.5	Spo19958.1.exon.5	exon
Spo19958.1.exon.6	Spo19958.1.exon.6	exon
Spo19958.1.exon.7	Spo19958.1.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19958.1.utr5p.1	Spo19958.1.utr5p.1	five_prime_UTR
Spo19958.1.utr5p.2	Spo19958.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo19958.1.CDS.1	Spo19958.1.CDS.1	CDS
Spo19958.1.CDS.2	Spo19958.1.CDS.2	CDS
Spo19958.1.CDS.3	Spo19958.1.CDS.3	CDS
Spo19958.1.CDS.4	Spo19958.1.CDS.4	CDS
Spo19958.1.CDS.5	Spo19958.1.CDS.5	CDS
Spo19958.1.CDS.6	Spo19958.1.CDS.6	CDS

Homology

[Close]

BLAST of Spo19958.1 vs. NCBI nr
Match: gi|902239520|gb|KNA25636.1| (hypothetical protein SOVF_004710 [Spinacia oleracea])

HSP 1 Score: 557.0 bits (1434), Expect = 1.800e-155
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1


		  
Query: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60
           MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII
Sbjct: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60

Query: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120
           FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS
Sbjct: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120

Query: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180
           CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD
Sbjct: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180

Query: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240
           VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ
Sbjct: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240

Query: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           DNVARIWVDIGTSESLLLDVLLNALTQISS+
Sbjct: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSD 271

[Close]

BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731349364|ref|XP_010685956.1| (PREDICTED: uncharacterized protein LOC104900270 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 431.8 bits (1109), Expect = 8.900e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1


		  
Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 3   TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 62

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 63  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 122

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 123 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 182

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 183 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 242

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 243 IWVDIGTNDSLILDVLMNALTQISSD 268

[Close]

BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731349362|ref|XP_010685955.1| (PREDICTED: uncharacterized protein LOC104900270 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 431.8 bits (1109), Expect = 8.900e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1


		  
Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 27  TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 86

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 87  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 146

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 147 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 206

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 207 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 266

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 267 IWVDIGTNDSLILDVLMNALTQISSD 292

[Close]

BLAST of Spo19958.1 vs. NCBI nr
Match: gi|728830994|gb|KHG10437.1| (dna-directed rna polymerase i subunit rpa2 [Gossypium arboreum])

HSP 1 Score: 318.9 bits (816), Expect = 8.400e-84
Identity = 157/210 (74.76%), Postives = 181/210 (86.19%), Query Frame = 1


		  
Query: 62  MDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSC 121
           M K  R++  + S     E +D E  DD E    +  FR R +EK+YD+DPEFAEILGSC
Sbjct: 51  MLKAKRREEDISSQPFDIE-MDDEYDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSC 110

Query: 122 LDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDV 181
           LDDP+KA+SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+
Sbjct: 111 LDDPEKARSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDI 170

Query: 182 SLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQD 241
           SLICD IRSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QD
Sbjct: 171 SLICDTIRSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQD 230

Query: 242 NVARIWVDIGTSESLLLDVLLNALTQISSE 272
           N+ARIWVDIGT+E L+LDVL+NALTQISS+
Sbjct: 231 NLARIWVDIGTTEPLILDVLINALTQISSD 259

[Close]

BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731406641|ref|XP_010656233.1| (PREDICTED: uncharacterized protein LOC100257820 [Vitis vinifera])

HSP 1 Score: 318.2 bits (814), Expect = 1.400e-83
Identity = 159/209 (76.08%), Postives = 179/209 (85.65%), Query Frame = 1


		  
Query: 67  RQQLRVRSSESGFE-ALDVEVQDDGELDG---PQKRFRERGDEKDYDRDPEFAEILGSCL 126
           RQ+L  +S  +  E A D  V +DG+ D    P+  F  R +E DYDR+PEFAEILGSCL
Sbjct: 52  RQRLNTQSLNTEIEEAADEGVGEDGDEDDEFLPRSGFGGREEEMDYDRNPEFAEILGSCL 111

Query: 127 DDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVS 186
           DDP KA+SKMEERLR+KRNKILHTKTGS  PMKVTFNKFDFSN+YIWFEFYN PL KD+S
Sbjct: 112 DDPQKARSKMEERLRRKRNKILHTKTGSALPMKVTFNKFDFSNTYIWFEFYNTPLAKDIS 171

Query: 187 LICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDN 246
           LICD +RSWHI+GRLGGCNSLNMQLSQSPFDKR SYDAI+GANV+PTTFYNIGDLEIQDN
Sbjct: 172 LICDALRSWHIVGRLGGCNSLNMQLSQSPFDKRPSYDAIQGANVNPTTFYNIGDLEIQDN 231

Query: 247 VARIWVDIGTSESLLLDVLLNALTQISSE 272
           +ARIWVDIGTSE LLLD+L+NALTQISS+
Sbjct: 232 LARIWVDIGTSEPLLLDILINALTQISSD 260

[Close]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1M0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_004710 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.300e-155
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1


		  
Query: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60
           MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII
Sbjct: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60

Query: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120
           FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS
Sbjct: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120

Query: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180
           CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD
Sbjct: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180

Query: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240
           VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ
Sbjct: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240

Query: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           DNVARIWVDIGTSESLLLDVLLNALTQISS+
Sbjct: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSD 271

[Close]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175610 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.200e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1


		  
Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 3   TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 62

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 63  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 122

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 123 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 182

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 183 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 242

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 243 IWVDIGTNDSLILDVLMNALTQISSD 268

[Close]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NCN4_GOSAR (Dna-directed rna polymerase i subunit rpa2 OS=Gossypium arboreum GN=F383_09136 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.800e-84
Identity = 157/210 (74.76%), Postives = 181/210 (86.19%), Query Frame = 1


		  
Query: 62  MDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSC 121
           M K  R++  + S     E +D E  DD E    +  FR R +EK+YD+DPEFAEILGSC
Sbjct: 51  MLKAKRREEDISSQPFDIE-MDDEYDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSC 110

Query: 122 LDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDV 181
           LDDP+KA+SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+
Sbjct: 111 LDDPEKARSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDI 170

Query: 182 SLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQD 241
           SLICD IRSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QD
Sbjct: 171 SLICDTIRSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQD 230

Query: 242 NVARIWVDIGTSESLLLDVLLNALTQISSE 272
           N+ARIWVDIGT+E L+LDVL+NALTQISS+
Sbjct: 231 NLARIWVDIGTTEPLILDVLINALTQISSD 259

[Close]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S7D3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G283500 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.900e-83
Identity = 153/203 (75.37%), Postives = 176/203 (86.70%), Query Frame = 1


		  
Query: 73  RSSESGFEALDVEVQDDGELDGP----QKRFRERGDEKDYDRDPEFAEILGSCLDDPDKA 132
           R  +   +  D+E+ DD   D         FR R +EK+YD+DPEFAEILGSCLDDP+KA
Sbjct: 57  REEDISSQPFDIEMDDDYGDDNEGYEASSGFRGREEEKNYDKDPEFAEILGSCLDDPEKA 116

Query: 133 QSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVI 192
           +SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+SLICD I
Sbjct: 117 RSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTI 176

Query: 193 RSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWV 252
           RSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QDN+ARIWV
Sbjct: 177 RSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWV 236

Query: 253 DIGTSESLLLDVLLNALTQISSE 272
           DIGT+E L+LDVL+NALTQISS+
Sbjct: 237 DIGTTEPLILDVLINALTQISSD 259

[Close]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A061GKX7_THECC (Ribonuclease P protein component 3 OS=Theobroma cacao GN=TCM_037715 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.400e-83
Identity = 154/201 (76.62%), Postives = 177/201 (88.06%), Query Frame = 1


		  
Query: 73  RSSESGFEALDVEV--QDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDPDKAQS 132
           RS E   + L++E+  ++D E    +  FR R +EK+YD+DPEFAEILGSCLDDP KA+S
Sbjct: 42  RSHEMSAQNLEIEMDEEEDNEEYEARSGFRGREEEKNYDKDPEFAEILGSCLDDPQKARS 101

Query: 133 KMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVIRS 192
           KME+RLRKKRNKILHTKTGS +PMKVTFNKFDFSNSYIWFEFYN PL+KD+SLICD IRS
Sbjct: 102 KMEDRLRKKRNKILHTKTGSATPMKVTFNKFDFSNSYIWFEFYNAPLEKDISLICDTIRS 161

Query: 193 WHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWVDI 252
           WHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+ TTFYNIGDLE+QDNVARIWVDI
Sbjct: 162 WHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNATTFYNIGDLEVQDNVARIWVDI 221

Query: 253 GTSESLLLDVLLNALTQISSE 272
           GT+E LLLDVL+NALTQISS+
Sbjct: 222 GTTEPLLLDVLINALTQISSD 242

[Close]

BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Match: AT4G29400.1 (Protein of unknown function (DUF3531))

HSP 1 Score: 284.6 bits (727), Expect = 6.200e-77
Identity = 142/205 (69.27%), Postives = 170/205 (82.93%), Query Frame = 1


		  
Query: 73  RSSESGFEALD-VEVQDDGELD---GPQKR--FRERGDEKDYDRDPEFAEILGSCLDDPD 132
           R  E G E  + V+  DD E++     +KR  +R + ++ DYD+DPEFA+ILG CLD+PD
Sbjct: 65  REMEEGVEEFEEVDDGDDDEVEDEFSAKKRGVYRAKKEKIDYDKDPEFADILGDCLDNPD 124

Query: 133 KAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICD 192
           KAQ KMEERLRKKRNKILHTKTGS + M VTFNKF++SNSY+W EFYN PL KD++LI D
Sbjct: 125 KAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISD 184

Query: 193 VIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARI 252
            IRSWHI+GRLGG NS+NMQLSQ+P DKR +YDAI GANV+PTTFYNIGDLE+QDNVARI
Sbjct: 185 TIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARI 244

Query: 253 WVDIGTSESLLLDVLLNALTQISSE 272
           W+DIGTSE L+LDVL+NALTQISS+
Sbjct: 245 WLDIGTSEPLILDVLINALTQISSD 269

[Close]

BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Match: AT5G08400.1 (Protein of unknown function (DUF3531))

HSP 1 Score: 148.7 bits (374), Expect = 5.300e-36
Identity = 73/161 (45.34%), Postives = 104/161 (64.60%), Query Frame = 1


		  
Query: 111 DPEFAEILGSCLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWF 170
           D E   +LG  + +P+  + K+EER+RKK       KTGS    KV F  F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 171 EFYNPPLQKDVSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTT 230
           E Y  P  +DV LI  VI++W+++GRLG  N+ N+QL+ +  +    YDA +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 231 FYNIGDLEIQDNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           F++I D+E QDN  R+WVD+GTS+   LDVLLN LT +SSE
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSE 300

The following BLAST results are available for this feature:

BLAST of Spo19958.1 vs. NCBI nr
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
BLAST of Spo19958.1 vs. ExPASy Swiss-Prot
BLAST of Spo19958.1 vs. TAIR (Arabidopsis)

BLAST of Spo19958.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239520\|gb\|KNA25636.1\|	1.8e-155	99.6	hypothetical protein SOVF_0047...	[more]
gi\|731349364\|ref\|XP_010685956.1\|	8.9e-118	77.4	PREDICTED: uncharacterized pro...	[more]
gi\|731349362\|ref\|XP_010685955.1\|	8.9e-118	77.4	PREDICTED: uncharacterized pro...	[more]
gi\|728830994\|gb\|KHG10437.1\|	8.4e-84	74.7	dna-directed rna polymerase i ...	[more]
gi\|731406641\|ref\|XP_010656233.1\|	1.4e-83	76.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S1M0_SPIOL	1.3e-155	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZI6_BETVU	6.2e-118	77.4	Uncharacterized protein OS=Bet...	[more]
A0A0B0NCN4_GOSAR	5.8e-84	74.7	Dna-directed rna polymerase i ...	[more]
A0A0D2S7D3_GOSRA	2.9e-83	75.3	Uncharacterized protein OS=Gos...	[more]
A0A061GKX7_THECC	8.4e-83	76.6	Ribonuclease P protein compone...	[more]

BLAST of Spo19958.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G29400.1	6.2e-77	69.2	Protein of unknown function (D...	[more]
AT5G08400.1	5.3e-36	45.3	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021920	Protein of unknown function DUF3531	PFAM	PF12049	DUF3531	coord: 154..271 score: 7.8
None	No IPR available	PANTHER	PTHR33102	FAMILY NOT NAMED	coord: 58..270 score: 1.8E
None	No IPR available	PANTHER	PTHR33102:SF2	SUBFAMILY NOT NAMED	coord: 58..270 score: 1.8E