Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGCACGAGATGCAGCATTATTTGTCACTAAGTTTTATCATCCTATCCATAATATGTAGGTTATCGATCGTGACCTTTTTAACTGAATAGTGACTAGCATGACCCATGCATCCACTTGCAGATCGAGCAGAATGAAGATTTGTAACAAAGGAAAAGAATTCCTTGTCCACAACTGCTAGGTTGATAGGCCCATCGGCGAGCTCAGCAAGGCCTTCGTTTCGCGGCTTCTTTAACAAGATATTTTGTAAATTTAATTTTTATTATGTTCGTTTTCTTAAGTCAACAAAAAAAAAATCTGATTTATATATATTGGTAACTACATAATTCGGTATCTCATTCATCATATCAATTAGAAAAACTTAATAGAAATCTTATACAAAAAAATATCTAAAATGTCGGAAGAGAAACACCATCACAGCCTTTTCCACCACCACAAGGATGGCAATGACAACAAGCCCGTAGACTATGCCAAGGAAGAAAAGTCTCACAAACACAAACAACACTTGGCTGAGCTCGGTACCGTCGCCGCTGGTGCTTTTGCTCTTGTAAGCTAGCTACCCACCTTCATCATTTTCATTATTACGAGTATGTGTTTACGTGTCTTAATTTAAATTACTAGCTATCCTGTCATGGACTCAATCTTGATAATATAGGATTGGAGAGATTAAGAACTAAACTTTTTTAAAAAAACACAAAAAGGGTATGTTTTCAGTCTTTTGTTGTTAGAAATCAATTCGATTTTAATAGATAAGGGTTCTTTTAAGTTAATGATTTGACTTAAATCATATGACATACAAATTCATAAAACCAAAACTTAAACTTGAGAGTGAGAATGATAAATGTTTATTAACGGGAACTTCCTTGTTTGACGAGAAACTGAGGCTTCCTTAATAATACTAATAATCTAGAATAAGTTTCTTTGATTAGTGATTCGTAATATAGACACTTTTCTTTTTGTATTGTTATGTAAATTAACTTGCTTGATTAATTAGCTAAAGAATTAATTGGTTATTTTAAAAATGGGAAATTGTAGCATGAGAAGCACAAGGGGAAGAAAGACATAGAGAATGCTCAAAAGCACAAAATAGAGCAAGGAATAGCGGTGGCTGCGGCCATAGGGGCGGGTGGATATGCCTTCCATGAGCATCATCAGAAGAAGGAAGCCAAGGAAGATGGAAAGCACCACCGCTAA AATGCACGAGATGCAGCATTATTTGTCACTAAGTTTTATCATCCTATCCATAATATGTAGGTTATCGATCGTGACCTTTTTAACTGAATAGTGACTAGCATGACCCATGCATCCACTTGCAGATCGAGCAGAATGAAGATTTGTAACAAAGGAAAAGAATTCCTTGTCCACAACTGCTAGGTTGATAGGCCCATCGGCGAGCTCAGCAAGGCCTTCGTTTCGCGGCTTCTTTAACAAGATATTTTGTAAATTTAATTTTTATTATGTTCGTTTTCTTAAGTCAACAAAAAAAAAATCTGATTTATATATATTGGTAACTACATAATTCGGTATCTCATTCATCATATCAATTAGAAAAACTTAATAGAAATCTTATACAAAAAAATATCTAAAATGTCGGAAGAGAAACACCATCACAGCCTTTTCCACCACCACAAGGATGGCAATGACAACAAGCCCGTAGACTATGCCAAGGAAGAAAAGTCTCACAAACACAAACAACACTTGGCTGAGCTCGGTACCGTCGCCGCTGGTGCTTTTGCTCTTCATGAGAAGCACAAGGGGAAGAAAGACATAGAGAATGCTCAAAAGCACAAAATAGAGCAAGGAATAGCGGTGGCTGCGGCCATAGGGGCGGGTGGATATGCCTTCCATGAGCATCATCAGAAGAAGGAAGCCAAGGAAGATGGAAAGCACCACCGCTAA ATGTCGGAAGAGAAACACCATCACAGCCTTTTCCACCACCACAAGGATGGCAATGACAACAAGCCCGTAGACTATGCCAAGGAAGAAAAGTCTCACAAACACAAACAACACTTGGCTGAGCTCGGTACCGTCGCCGCTGGTGCTTTTGCTCTTCATGAGAAGCACAAGGGGAAGAAAGACATAGAGAATGCTCAAAAGCACAAAATAGAGCAAGGAATAGCGGTGGCTGCGGCCATAGGGGCGGGTGGATATGCCTTCCATGAGCATCATCAGAAGAAGGAAGCCAAGGAAGATGGAAAGCACCACCGCTAA MSEEKHHHSLFHHHKDGNDNKPVDYAKEEKSHKHKQHLAELGTVAAGAFALHEKHKGKKDIENAQKHKIEQGIAVAAAIGAGGYAFHEHHQKKEAKEDGKHHR Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo20053.1 vs. NCBI nr
Match: gi|902220760|gb|KNA18691.1| (hypothetical protein SOVF_068400 [Spinacia oleracea]) HSP 1 Score: 208.4 bits (529), Expect = 6.100e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of Spo20053.1 vs. NCBI nr
Match: gi|731313583|ref|XP_010680954.1| (PREDICTED: abscisic stress-ripening protein 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 154.5 bits (389), Expect = 1.000e-34 Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 1
BLAST of Spo20053.1 vs. NCBI nr
Match: gi|1012180293|ref|XP_015967993.1| (PREDICTED: abscisic stress-ripening protein 2-like [Arachis duranensis]) HSP 1 Score: 134.0 bits (336), Expect = 1.500e-28 Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 1
BLAST of Spo20053.1 vs. NCBI nr
Match: gi|1012350223|gb|KYP61412.1| (Abscisic stress-ripening protein 2 [Cajanus cajan]) HSP 1 Score: 134.0 bits (336), Expect = 1.500e-28 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
BLAST of Spo20053.1 vs. NCBI nr
Match: gi|702343277|ref|XP_010056726.1| (PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]) HSP 1 Score: 132.9 bits (333), Expect = 3.200e-28 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 1
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGR7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_068400 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 4.200e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0C7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011840 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 7.200e-35 Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 1
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Match: A0A151T2W8_CAJCA (Abscisic stress-ripening protein 2 OS=Cajanus cajan GN=KK1_015901 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.000e-28 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Match: Q9ZRB5_SOLTU (Ci21B protein OS=Solanum tuberosum GN=ci21B PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.300e-28 Identity = 68/107 (63.55%), Postives = 79/107 (73.83%), Query Frame = 1
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Match: A0A059C5M8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02058 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.300e-28 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 1
BLAST of Spo20053.1 vs. ExPASy Swiss-Prot
Match: ASR1_SOLLC (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum GN=ASR1 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.500e-30 Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 1
BLAST of Spo20053.1 vs. ExPASy Swiss-Prot
Match: ASR3_SOLLC (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum GN=ASR3 PE=4 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 2.200e-29 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 1
BLAST of Spo20053.1 vs. ExPASy Swiss-Prot
Match: ASR2_SOLLC (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum GN=ASR2 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.600e-27 Identity = 66/110 (60.00%), Postives = 77/110 (70.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20053.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20053.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20053.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo20053.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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