Spo20080.1 (mRNA) | SpinachBase

Overview


Name	Spo20080.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(Germin-like protein) (Precursor)
Location	chr1 : 11720862 .. 11721488 (+)
Sequence length	627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACCTTGTAACTTTCTTCACCTTTACCGTCTTGGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTGGGAGATACTACTCTCCCAAGGGGACCTGAAGGATTCGCTTGCAAGGATCCTTCTAATGTAACCACTGATGATTTTGTTTTCACTGGTTTTCGCCATGAAAGCTTTACTGCAAATCTATTTAGAAGCAATGTCACGTTGGGGTTTGTAGATAATTTCCCTGCTTTGAATGGTTTAGGTATCTCTATGGCAAGGCTAGACTTTGCCGTTGGCGGAGTTATTCCTGTACATTCCCACCGAACATCAGAAGTTATAATCGTGACAAGAGGATCTATAATTGCAGGATTCATTGACGCAAGTAATAATGCATTTTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTTCCACAGGCCATGCTTCATTTCCAAATCAACGTTGGTAGAACCCCGGCTACTGCCATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTTACCACCACCTCCTTATTTGCTGGCAATTTACCTGCTGATATCGCTCAACAAATCACTCTTCTAGATCAAGGCGAGGTGATGAGAATGAAGAGGCTATTTGGCACTGCTTAA

mRNA sequence

ATGAACAACCTTGTAACTTTCTTCACCTTTACCGTCTTGGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTGGGAGATACTACTCTCCCAAGGGGACCTGAAGGATTCGCTTGCAAGGATCCTTCTAATGTAACCACTGATGATTTTGTTTTCACTGGTTTTCGCCATGAAAGCTTTACTGCAAATCTATTTAGAAGCAATGTCACGTTGGGGTTTGTAGATAATTTCCCTGCTTTGAATGGTTTAGGTATCTCTATGGCAAGGCTAGACTTTGCCGTTGGCGGAGTTATTCCTGTACATTCCCACCGAACATCAGAAGTTATAATCGTGACAAGAGGATCTATAATTGCAGGATTCATTGACGCAAGTAATAATGCATTTTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTTCCACAGGCCATGCTTCATTTCCAAATCAACGTTGGTAGAACCCCGGCTACTGCCATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTTACCACCACCTCCTTATTTGCTGGCAATTTACCTGCTGATATCGCTCAACAAATCACTCTTCTAGATCAAGGCGAGGTGATGAGAATGAAGAGGCTATTTGGCACTGCTTAA

Coding sequence (CDS)

ATGAACAACCTTGTAACTTTCTTCACCTTTACCGTCTTGGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTGGGAGATACTACTCTCCCAAGGGGACCTGAAGGATTCGCTTGCAAGGATCCTTCTAATGTAACCACTGATGATTTTGTTTTCACTGGTTTTCGCCATGAAAGCTTTACTGCAAATCTATTTAGAAGCAATGTCACGTTGGGGTTTGTAGATAATTTCCCTGCTTTGAATGGTTTAGGTATCTCTATGGCAAGGCTAGACTTTGCCGTTGGCGGAGTTATTCCTGTACATTCCCACCGAACATCAGAAGTTATAATCGTGACAAGAGGATCTATAATTGCAGGATTCATTGACGCAAGTAATAATGCATTTTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTTCCACAGGCCATGCTTCATTTCCAAATCAACGTTGGTAGAACCCCGGCTACTGCCATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTTACCACCACCTCCTTATTTGCTGGCAATTTACCTGCTGATATCGCTCAACAAATCACTCTTCTAGATCAAGGCGAGGTGATGAGAATGAAGAGGCTATTTGGCACTGCTTAA

Protein sequence

MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAGFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADIAQQITLLDQGEVMRMKRLFGTA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20080	Spo20080	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20080.1	Spo20080.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20080.1.exon.1	Spo20080.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20080.1.CDS.1	Spo20080.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo20080.1 vs. NCBI nr
Match: gi|902210708|gb|KNA16511.1| (hypothetical protein SOVF_088480 [Spinacia oleracea])

HSP 1 Score: 399.1 bits (1024), Expect = 4.900e-108
Identity = 200/208 (96.15%), Postives = 202/208 (97.12%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           M NLV FF FT+LVSLCQAIELDFCVGDTTLPRGPEGFACKDP+NVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLPADIAQQITLL   EVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo20080.1 vs. NCBI nr
Match: gi|594553152|gb|AHM10392.1| (GLP [Spinacia oleracea])

HSP 1 Score: 399.1 bits (1024), Expect = 4.900e-108
Identity = 200/208 (96.15%), Postives = 203/208 (97.60%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           M NLV FF FT+LVSLCQAIELDFCVGDTTLPRGPEGFACKDP+NVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLPADIAQQITLL Q EVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo20080.1 vs. NCBI nr
Match: gi|902168695|gb|KNA07543.1| (hypothetical protein SOVF_170820 [Spinacia oleracea])

HSP 1 Score: 389.8 bits (1000), Expect = 3.000e-105
Identity = 198/209 (94.74%), Postives = 202/209 (96.65%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLC-QAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHE 60
           MNNLV FFTFT+LVSL  QAIELDFCVGDTTLPRGP+GFACKDP+NVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLDQGEVMRMKRLFGTA 209
           GNLPA IAQQITLL Q EVMRMKRLFGTA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo20080.1 vs. NCBI nr
Match: gi|902168694|gb|KNA07542.1| (hypothetical protein SOVF_170810 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 378.6 bits (971), Expect = 6.800e-102
Identity = 189/197 (95.94%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           MNNLV FFTFT++VSLCQAIELDFCVGDTTLPRGPEGFACKD +NVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGE 198
           NLPADIAQQITLL QGE
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo20080.1 vs. NCBI nr
Match: gi|731320509|ref|XP_010670845.1| (PREDICTED: auxin-binding protein ABP19a-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 334.7 bits (857), Expect = 1.100e-88
Identity = 159/208 (76.44%), Postives = 182/208 (87.50%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           MNNL+ FFTF++LVS   AIE DFCVGD +LPRGP+G+ACKDP+N+TTDDFV+TGFR E 
Sbjct: 1   MNNLIIFFTFSLLVSFSHAIEFDFCVGDLSLPRGPQGYACKDPANITTDDFVYTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T+N+FR+NVTL F D FPALNGLGISMARLDF VGGVIP+HSHRTSEVII+  GSIIAG
Sbjct: 61  TTSNIFRNNVTLAFADAFPALNGLGISMARLDFGVGGVIPIHSHRTSEVIIIATGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FID +N A+YRRLEVGDVMIFPQ+MLHFQ+NVG TPATA VSLNGANPA+Q TTT+LFA 
Sbjct: 121 FIDTTNTAYYRRLEVGDVMIFPQSMLHFQVNVGTTPATAFVSLNGANPAIQLTTTALFAS 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLP DI +QITLL   EVMR+KR+FGTA
Sbjct: 181 NLPGDIVEQITLLSNEEVMRLKRIFGTA 208

[Close]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Match: W8S9T6_SPIOL (GLP OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.400e-108
Identity = 200/208 (96.15%), Postives = 203/208 (97.60%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           M NLV FF FT+LVSLCQAIELDFCVGDTTLPRGPEGFACKDP+NVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLPADIAQQITLL Q EVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAI3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088480 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.400e-108
Identity = 200/208 (96.15%), Postives = 202/208 (97.12%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           M NLV FF FT+LVSLCQAIELDFCVGDTTLPRGPEGFACKDP+NVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLPADIAQQITLL   EVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLH3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170820 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.100e-105
Identity = 198/209 (94.74%), Postives = 202/209 (96.65%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLC-QAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHE 60
           MNNLV FFTFT+LVSL  QAIELDFCVGDTTLPRGP+GFACKDP+NVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLDQGEVMRMKRLFGTA 209
           GNLPA IAQQITLL Q EVMRMKRLFGTA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJX0_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_170810 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.800e-102
Identity = 189/197 (95.94%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           MNNLV FFTFT++VSLCQAIELDFCVGDTTLPRGPEGFACKD +NVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLDQGE 198
           NLPADIAQQITLL QGE
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQ38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_159240 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.000e-88
Identity = 167/208 (80.29%), Postives = 181/208 (87.02%), Query Frame = 1


		  
Query: 1   MNNLVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHES 60
           MNNLV FF  ++LV +  AIELDFCVGDTTLPRGP+G+ACKDP+NVTTDDFVFTGFR E 
Sbjct: 1   MNNLVVFFALSLLVYVSHAIELDFCVGDTTLPRGPQGYACKDPANVTTDDFVFTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T N+FR NVTL FV+ FPALNGLGISMARLDF VGGVIPVHSHRTSE+I V RGSIIAG
Sbjct: 61  TTTNMFRYNVTLAFVNQFPALNGLGISMARLDFGVGGVIPVHSHRTSEIITVIRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASN A+YRRLEVGDVMIFPQ+MLHFQINVG TPATAIVSLNGANPAVQFT  SLFAG
Sbjct: 121 FIDASNTAYYRRLEVGDVMIFPQSMLHFQINVGTTPATAIVSLNGANPAVQFTMDSLFAG 180

Query: 181 NLPADIAQQITLLDQGEVMRMKRLFGTA 209
           NLPA+IA+QITLL   EV RM+R F  A
Sbjct: 181 NLPANIAEQITLLSNEEVTRMRRSFDNA 208

[Close]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.100e-48
Identity = 93/200 (46.50%), Postives = 130/200 (65.00%), Query Frame = 1


		  
Query: 8   FTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLFR 67
           FTF +L+S   A   DFCV D   P GP GF+CK P++V  +DFVF+G      T+N+ +
Sbjct: 12  FTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIK 71

Query: 68  SNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDASN 127
           + VT  FV  FP +NGLGIS+ARLD AVGGV+P H+H   SEV+IV +G+I AGF+ + N
Sbjct: 72  AAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDN 131

Query: 128 NAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADI 187
             + + LE GD+M+FPQ +LHFQ+N G  PA A  S   A+P +Q    +LF  +LP ++
Sbjct: 132 TPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEV 191

Query: 188 AQQITLLDQGEVMRMKRLFG 207
             Q T LD  ++ ++K + G
Sbjct: 192 IAQTTFLDAAQIKKLKGVLG 211

[Close]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.400e-46
Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 1


		  
Query: 7   FFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLF 66
           FFTF +L+S   A   DFCV D   P GP G++CK P+ VT +DFV++G      T N+ 
Sbjct: 6   FFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNII 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGVIP H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+M+FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +LP +
Sbjct: 126 NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTE 185

Query: 187 IAQQITLLDQGEVMRMKRLFG 207
           +  Q T LD  ++ ++K + G
Sbjct: 186 LIAQTTFLDAAQIKKLKGVLG 206

[Close]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.300e-46
Identity = 89/201 (44.28%), Postives = 130/201 (64.68%), Query Frame = 1


		  
Query: 7   FFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLF 66
           FFTF +L+S   A   DFCV D   P GP G++CK P+ VT +DFV++G      T N+F
Sbjct: 6   FFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIF 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGV+P H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+++FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +L  +
Sbjct: 126 NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATE 185

Query: 187 IAQQITLLDQGEVMRMKRLFG 207
           +  Q TLLD  ++ ++K + G
Sbjct: 186 LIAQTTLLDAPQIKKLKGVLG 206

[Close]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.000e-44
Identity = 91/205 (44.39%), Postives = 131/205 (63.90%), Query Frame = 1


		  
Query: 4   LVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTA 63
           L    +F +L     A+  DFCV D T    P G+ CK  ++V   DF + G      T+
Sbjct: 8   LPVLLSFLLLPFSSMALTQDFCVADLTCSDTPAGYPCK--ASVGAGDFAYHGLAAAGNTS 67

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFI 123
           NL ++ VT  FV  FP +NGLGIS ARLD AVGGV+P+H+H   SE++ VT+G++ AGFI
Sbjct: 68  NLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFI 127

Query: 124 DASNNAFYRR-LEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGN 183
            +S+N  Y R L  GD+M+FPQ +LH+Q N G++ A A+V+ +G NP +Q T  +LFA N
Sbjct: 128 TSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANN 187

Query: 184 LPADIAQQITLLDQGEVMRMKRLFG 207
           LP+ I +++T LD  +V ++K + G
Sbjct: 188 LPSAIVEKVTFLDDAQVKKLKSVLG 210

[Close]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Match: GLP1_MORAL (Germin-like protein OS=Morus alba PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.000e-44
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 1


		  
Query: 7   FFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLF 66
           FF F++L S       DFCV D + P+GP G++CK+P+ VT D+FV++G      T NL 
Sbjct: 6   FFLFSLLFSSSHGAIQDFCVADYSAPQGPAGYSCKNPAKVTVDNFVYSGLGITGNTTNLI 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F + FP +NGLGIS+AR D A GGVIP H+H   SE+IIV  GS+ A F+ + 
Sbjct: 66  KAAVTTAFDNQFPGVNGLGISLARPDLAPGGVIPFHTHPGASEIIIVIEGSLCAAFVSSD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD MIFP  +LHFQ+N G+  A   V+ N  NP +Q    +LF  +L  +
Sbjct: 126 NKVYLKSLKKGDTMIFPSGLLHFQLNAGKNNALFFVAFNSPNPGLQLVDYALFGNDLATE 185

Query: 187 IAQQITLLDQGEVMRMKRLFG 207
           +    + LD  E+ R+K + G
Sbjct: 186 LVAAASFLDPAEIKRLKAVLG 206

[Close]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Match: AT5G20630.1 (germin 3)

HSP 1 Score: 178.3 bits (451), Expect = 4.800e-45
Identity = 84/201 (41.79%), Postives = 129/201 (64.18%), Query Frame = 1


		  
Query: 7   FFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTANLF 66
           FF  +++ ++  A   DFCV D   P+ P G++CK+P  VT +DF FTG      T+N+ 
Sbjct: 8   FFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNII 67

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   +  +NGLG+S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI ++
Sbjct: 68  KAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSA 127

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +LP++
Sbjct: 128 NKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSE 187

Query: 187 IAQQITLLDQGEVMRMKRLFG 207
           + +  T L   EV ++K + G
Sbjct: 188 LVEATTFLSDAEVKKLKGVLG 208

[Close]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Match: AT1G72610.1 (germin-like protein 1)

HSP 1 Score: 168.7 bits (426), Expect = 3.800e-42
Identity = 88/204 (43.14%), Postives = 122/204 (59.80%), Query Frame = 1


		  
Query: 4   LVTFFTFTVLVSLCQAIELDFCVGDTTLPRGPEGFACKDPSNVTTDDFVFTGFRHESFTA 63
           L T F  ++L +L  A   DFCV +      P G+ C  P +V   DFVF+G      T 
Sbjct: 2   LRTIFLLSLLFALSNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTT 61

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHR-TSEVIIVTRGSIIAGFI 123
           N+  + VT  F   FP LNGLG+S ARLD A  GVIP+H+H   SEV+ V  GSI AGF+
Sbjct: 62  NIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFV 121

Query: 124 DASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNL 183
            ++N  + + L+ G VM+FPQ +LHFQIN G++ A+A+V+ N ANP +Q    +LFA +L
Sbjct: 122 SSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSL 181

Query: 184 PADIAQQITLLDQGEVMRMKRLFG 207
           P ++    T LD   V ++K + G
Sbjct: 182 PTELVVGTTFLDATTVKKLKGVLG 205

[Close]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Match: AT3G04200.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.500e-30
Identity = 74/191 (38.74%), Postives = 106/191 (55.50%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRG-PEGFACKDPSNVTTDDFVFTGFRHESFTANLFRSNVTLGFVDNFPAL 82
           DFCV  +   R    G  CKDP +VT +DF ++G      T N   SNVT   V+  P L
Sbjct: 33  DFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGL 92

Query: 83  NGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDA---SNNAFYRRLEVGD 142
           N LG+S+ARLDFA GG  P H H R +E+++VT+G ++ GF+ +   +N  FY+ L+ GD
Sbjct: 93  NTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGD 152

Query: 143 VMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGN--LPADIAQQITLLDQ 202
           V +FP  ++HFQ+NV RT A A       NP       ++F  N  +P ++  +   LD 
Sbjct: 153 VFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDV 212

Query: 203 GEVMRMKRLFG 207
             V  +  +FG
Sbjct: 213 KLVRFLHIVFG 223

[Close]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Match: AT5G38960.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 3.300e-30
Identity = 71/192 (36.98%), Postives = 106/192 (55.21%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRG--PEGFACKDPSNVTTDDFVFTGFRHESFT-ANLFRSNVTLGFVDNFP 82
           DFC+G  T        G  CKDP  VT DDF F+G      T ++   SNVT   V+  P
Sbjct: 30  DFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIP 89

Query: 83  ALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDA--SNNAFYRRLEVG 142
            LN LGIS+ R+D+ + G  P H+H R +E+++V  G++  GF  +   N  F + L  G
Sbjct: 90  GLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKG 149

Query: 143 DVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD--IAQQITLLD 202
           DV +FP+ ++HFQ+N+G+ PA A  SL+  NP V     +LF    P D  +  +   LD
Sbjct: 150 DVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLD 209

Query: 203 QGEVMRMKRLFG 207
              ++++++ FG
Sbjct: 210 PKVIIQLQKKFG 221

[Close]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Match: AT5G38910.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.300e-29
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRGP--EGFACKDPSNVTTDDFVFTGFRHESFTAN-LFRSNVTLGFVDNFP 82
           DFCVG  T   G    G  CKDP  VT +DF FTG  HE+   N    SNVT   V+N P
Sbjct: 30  DFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGL-HEARPPNPKTGSNVTAVNVNNLP 89

Query: 83  ALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS--NNAFYRRLEVG 142
            LN LGIS+ R+D+ V G  P H+H R SEV+ V  G++  GF+ ++  N  F + L  G
Sbjct: 90  GLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEG 149

Query: 143 DVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           DV +FPQ ++HFQ+NVG+ PA A   L+  NP V     ++F  N   D
Sbjct: 150 DVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQID 197

The following BLAST results are available for this feature:

BLAST of Spo20080.1 vs. NCBI nr
BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
BLAST of Spo20080.1 vs. TAIR (Arabidopsis)

BLAST of Spo20080.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210708\|gb\|KNA16511.1\|	4.9e-108	96.1	hypothetical protein SOVF_0884...	[more]
gi\|594553152\|gb\|AHM10392.1\|	4.9e-108	96.1	GLP [Spinacia oleracea]	[more]
gi\|902168695\|gb\|KNA07543.1\|	3.0e-105	94.7	hypothetical protein SOVF_1708...	[more]
gi\|902168694\|gb\|KNA07542.1\|	6.8e-102	95.9	hypothetical protein SOVF_1708...	[more]
gi\|731320509\|ref\|XP_010670845.1\|	1.1e-88	76.4	PREDICTED: auxin-binding prote...	[more]

BLAST of Spo20080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
W8S9T6_SPIOL	3.4e-108	96.1	GLP OS=Spinacia oleracea PE=2 ...	[more]
A0A0K9RAI3_SPIOL	3.4e-108	96.1	Uncharacterized protein OS=Spi...	[more]
A0A0K9QLH3_SPIOL	2.1e-105	94.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9QJX0_SPIOL	4.8e-102	95.9	Uncharacterized protein (Fragm...	[more]
A0A0K9QQ38_SPIOL	1.0e-88	80.2	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo20080.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ABP20_PRUPE	1.1e-48	46.5	Auxin-binding protein ABP20 OS...	[more]
AB19A_PRUPE	1.4e-46	44.7	Auxin-binding protein ABP19a O...	[more]
AB19B_PRUPE	5.3e-46	44.2	Auxin-binding protein ABP19b O...	[more]
GL814_ORYSJ	5.0e-44	44.3	Germin-like protein 8-14 OS=Or...	[more]
GLP1_MORAL	5.0e-44	42.7	Germin-like protein OS=Morus a...	[more]

BLAST of Spo20080.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G20630.1	4.8e-45	41.7	germin 3	[more]
AT1G72610.1	3.8e-42	43.1	germin-like protein 1	[more]
AT3G04200.1	1.5e-30	38.7	RmlC-like cupins superfamily p...	[more]
AT5G38960.1	3.3e-30	36.9	RmlC-like cupins superfamily p...	[more]
AT5G38910.1	1.3e-29	44.3	RmlC-like cupins superfamily p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 131..151 score: 2.3E-13coord: 164..179 score: 2.3E-13coord: 101..121 score: 2.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 68..195 score: 5.6
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 63..199 score: 2.0
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 21..203 score: 9.53
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 22..203 score: 9.8
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 3..206 score: 4.4
None	No IPR available	PANTHER	PTHR31238:SF21	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 3..206 score: 4.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity