Spo20081.1 (mRNA) | SpinachBase

Overview


Name	Spo20081.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Enhancer of rudimentary homolog
Location	chr1 : 11589590 .. 11594769 (+)
Sequence length	1622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTACGGGGATATTCTTGTTTTGCAGGTTGTAAGAAGATCGTGCCAACGCATACCTGATACCTCCGTGGAAAGGGTGACACGTCAGCACCAACAAAGTTCCCACACCATTTGGCGCCGTCTGTGGGGAGGTACAGTATCATGGCAGACCTGAAATCTGAAGGTGAGAGACATGAGGGCGACTCAAGGGAAAGGTGTCCGAGCGAAAGGAGCTCCTCGCGAACTCGTTCTCACAAAGATCTTCAGCCTACTGCTAAGGGCGCAACATTAACCATAAGACGAGTAACCACGACACCTCCCAACGCAGTAGCTAGCCGACCTGCTTCAACCAGATTACTACAACAAATGCTACATAGTTAATGTTGCGCCCTTAACAGTAAGCTGATTACCAATATTATATTATTTCTCACACTTACCTAATAACCCACCTACACCCCTACTCCCTACAACAAATCATTTAAAAATTTACGCCCACATTCACCACTCTCCATCACTTACACATTTTTCAATAACAATCAAACGGTGCAAGTATTAAGGGACGGAGGGAGTAGCTGTTAATTGAAATACACTTCCTCAGTACGGAGTATTTGGGGATTTGATTTGGTCTTTTGCTAGTCGTCGCCCGCCGTAGACCGTGGCCAGTGGGCACTTGTTGGGAGTGCGAGATTCTCTCTTTCTGTAATCGCGTTTTGCTGATACCCTTTCCTTATTCAACCTCTGCAACTTCTTCTGGCCGCCCCTATCCTTCAGTATGGTACTCGCTCTTCTCTTTCTCTCTCCTCACCTCCATTTTCATAACTTTCACTGCTTGTTTTTGTTGTAATGATAATTGAGCTCAATTTTTTTCATTTTTTGAACCAACAACAAGAAAACGTTATTGTTTATTTGATTTTTGTTGTTATGAATTCTAAAGCTAGGGTTTTAGCAAGAACTTGAGCTTAGTTGTGACAACAAAACGAGACTCTGTGTTTGCTTGGAATTTTGATAGATGAATACGAAGTTGAGGTTTGGGGATAATTTTTTTGATGATTCTTTTGGTGTTTAGAGTTGTCTGTGAAGTGGAAATACATTTATCATGAGGTGATAATGAAAAATTTCTGGAACTTGTTAATTTTTGCAATTGATTTGGGAATTAGGGTTTTGACTTGAAGTTCAGTTCTTGTTTGTACTTCTGTGGTTGGGTGGATTCCAGTGTAATCAGAATCAAAGTAGTGTAATGATGTGCTTGTATATGTTGTACGGTATATTCATAAAATTCAGTTGGATTTATTTATTTATTTAGGAGGTGGGCCGTCGGAGGGGGGGAGGGGGATTGACATAAATTTTGTACTCGTATATGGTGATATTCTAGTATATGAAGTTGTTGCAATTGAGGTTTTATTTTGCTTGGTGAAGGGTTTGGATTTTCTCATAAATTTTGAGGATTGTTTCAAAAATCTTTAAGGAATTGTGGTCGACCTTCTTGTCCTATTTTTCTAGTTGAAGCCTTGGTATAAAGGATGTAGTATTAGAATTAGCTTATTTGGATCATTAGACAGTATGGAAGACTCATTCACACCATAGCAGACATTGAACAGGCTTTGTAGAATTGATGTTACTCGAGTTTTTTCGTAAGTGTTTAAAACTCAATGAGTTGGAAACGGTCACAAATCACAATGAGTCTTCTCCATATGTTAGATCATTACGAGATTGACAGGTTTGCTATTGTCAAATCAAATGCATTGAGTTTAAGTGGAGTGTTTTTTTTGTTTTGTTTTGTTTTGTTCTTTGAGTTTAAATGGAGTTTTTAGTTTTCCTTTCATTGAATGAGCTGATAACTAGTGGAGTAAGTGATTGATTCTAATGTCTGATTTCAATGAAATTAAGATGACGGATAATTGGCTGGCTTTACTTCTGTGATTTTTTTTTTGAAAAAACACTCTGTAAATGGTGCTATGCTACTTTAGATCTCTTCATATGGGATGCACTCTATGAACTACTGTTTAGTTCAGCTATTTGATCCTGCCACTGATGTGTACTCTACTTACTTATTTGAGCATAAGCTGATCTCTAGAATCCCACTGTATTGCAAAAGACCCTTTAGTAATGAAATTGCTTACCATGTTAGATATACACCTATGCCTTTTTCCACCGCCAAGAAAAGTGAGTCAGTAAATTTTGTTTATACAGAGTATGATCTTGGTTATGCGTTTTACTATGTTACTAGGTCCCTTACCAGAAATATACTCTCGTGGCTTTAGTAGTTCTGTTGAAATTGTGAGTCATTGAACCACCTGTCCAAATTGGTTAGTGCATGAGTCCTGAAAGGCAGAACTGCAGAAATATACTCAACTTTATAATGGATTAGTCGAATGGTTGTACACTTATTTTCTGAAGCTAAGTCGAACAATTAGACCTAAAGTTTTTTGCAAATGATGGTCAAGACAGGCAATGGGTTGTGAAAAGTTAAAATTGTAATTCATTATCCAATCAATCTTATATTCTGCTCCTCTTTATACTGAAGTGCATACTTGAGTAAGGAAATTGATATTCTGTTGTAGGTTTCTCTTAGTTAAAAATGCGTATCCTAGTTGTAGGATTATCTTGAAATCAGTGACTGAATGTGCATGATCAAATTCTGGTACTTCAGCACATAGACATGATTGTCATGAACCTAGATGACACTCTAGGTCAATGTTTGAGCATACTGGAAGCATTTATATAGGAATATCCTGCAAGTGATTTGTAATCGTCTGTGATATGAAATCTTTGGTTTCAAGATCCAAAGTATGGAAGTAAATCATCATGCATTTTTTTTAAAGGTATGAAAAATGGACAACACATGCTGATCTTAAGTTAAATATTGTGTTGCAGCTACAACTGTGTAAGATAATTTTCTTTCTGTTTATTAGTAAAATTATATTCAAGCATATGATAAATGAAATAATTATCAACAAGCAAGATGTATTGTGGGCTATCTGATTTTCGCAGCAATGAATTATGTTAACAGCAATGAATTATGAATTATTGTGTGAAGATTTTTTTAACTGTAAATATGACTAGAAAATCTGTGTGTGTTTTTGCTTTGGAGTACCAGTTCGTTACTTCGACTGCATTTGGTATTCATTTGTCTCTCTTGTTCAGTTGGTCCCTACTTTGAGCCTTATCAATCCTTAATGCTTTGGGGTGCTTACTGGAGCCATTTTTCAATTTTACAGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTAGGTTGTTATTTTTGGTTTATTATACAAACTTTAGTACGGGAGTTTGAACTTTTTCATATGAGCTGTTTCATTATTTGGTAAAAGAAGCTTTACTGGTTGAATGAGGATGAAACCTAAATAAAGGAACCATGCTTACAAGACTTACAATCTTGTATTCATCTATGTCATGTGGGCAAGGTTTGTAAAAGATCCACCTTACCCTAATCAATTTCAACCAGTAGCGTCTTTTAGACGAACTAAATAATATTAAAAAGATCAATAGTAATTACTAAAGCTGGTTTACTCTATCACTACTTATTTCTGATTTTTTTTTCGATGCCTACTTGTGGTATTTTCTTGGGGATAAGTAAATGAAATATGAGTGCAGTACACTTTTTAATTAATTTATTCCTAAGTTTGTTTGGAAGTCAATCAGGGGCCTAGAAAAAACAGAACATGCTAATTGTACTGAGGAAGCCACAAAGGAATAGAGCACAGAACACCTAGTAAAACCAAAGGGGGAAACCTGAAACTTGATCAGGATTGAAAGGGGCAGTCACTTTCTAGAATGCGTCTCACCCCGCCACTGACATCATGAGCAAAGCAAGTGTTTTGAGCTTCTGAACAAAAGCATAAGCTAAACTGAAAAGTTCACACAACAGCAGATCCAACTCCAATAGCCTCTGTTGACTGTAGCATCTTAGTCTACCTGCTGAATGACTTGCCTGAGGCAGAAATCTTTTTTGTTTTGTTTACTTGTGCATGTTTCACATGCAGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTGTACGTCTCTCATCCTAGCTGTATTTATTTGGATGTATGTTACCATATATTTTATTTCAAATAATTCTCAATGATCAGAAGATTAGCTATTCTGTTAAAGTTATTTTAATCTGTCATATACTCTGTAGTTGAATGTTATTTTGCAACTACAGCTATCTTTTATTTGTCTTTCATCGTAAGGATTTTTGATACTTGATTTTAACATGTCTTATTTTCTGAATTATTTAGTTGATCAATTGCCAAATTTGTAGCATATCTTGGTGTTTATTGTATTTTAATTCTGTTCTGTTAATGATTCTAATTTTCTCCCGGTTGCTTGATTGCACTGATATTTGTTGTCTTTGTTGTTTGTGTAGTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGAATCAAGGAGCAAACTGATTTGGGTTCTTGGTTACTGAATCGCTGCAGATCCTATTTGCAGTACTGAAAGCATTCTATCTGTAAGAACGGTGTTTATATGCACAAATTTTCTGTAATGTGAAATGTAGTTATTTTACCTTAGGATGTTGAACTAGATTTGAATCCACAGTTATGATGGCTAAAGATATACAAGGTTTAGAAAATATACACCCAACCGACTGATTTGATATTTAGCCTGTAATTGAATGACAGAAAATATATCTTTAAACACTATTGTTATCGTAATTAACAAGGCATACGATTGTACGGAGTAGTTATAGAAAAAGATATCCTCCTTTTCTCTAGACTCTAGGTGTGTATGAGAAAAGAACGGTGGTGACTGGCGAGCCTGTGAATATGTGGCATGTGAACCACCATTGAGCCTGTTGGTTTGGCTACCATGGAATAGTAGACATATTCGAGCTAATGATTTTACCAGGATTATCTAATAAATGTACATAAGTGATGTAACAATTCAATTCAATTCAAATTATTTATTTATTTGATTAGTTTTAGTCTGTACCGA

mRNA sequence

CCTACGGGGATATTCTTGTTTTGCAGGTTGTAAGAAGATCGTGCCAACGCATACCTGATACCTCCGTGGAAAGGGTGACACGTCAGCACCAACAAAGTTCCCACACCATTTGGCGCCGTCTGTGGGGAGGTACAGTATCATGGCAGACCTGAAATCTGAAGGTGAGAGACATGAGGGCGACTCAAGGGAAAGGTGTCCGAGCGAAAGGAGCTCCTCGCGAACTCGTTCTCACAAAGATCTTCAGCCTACTGCTAAGGGCGCAACATTAACCATAAGACGAGTAACCACGACACCTCCCAACGCAGTAGCTAGCCGACCTGCTTCAACCAGATTACTACAACAAATGCTACATAGTTAATGTTGCGCCCTTAACAGTAAGCTGATTACCAATATTATATTATTTCTCACACTTACCTAATAACCCACCTACACCCCTACTCCCTACAACAAATCATTTAAAAATTTACGCCCACATTCACCACTCTCCATCACTTACACATTTTTCAATAACAATCAAACGGTGCAAGTATTAAGGGACGGAGGGAGTAGCTGTTAATTGAAATACACTTCCTCAGTACGGAGTATTTGGGGATTTGATTTGGTCTTTTGCTAGTCGTCGCCCGCCGTAGACCGTGGCCAGTGGGCACTTGTTGGGAGTGCGAGATTCTCTCTTTCTGTAATCGCGTTTTGCTGATACCCTTTCCTTATTCAACCTCTGCAACTTCTTCTGGCCGCCCCTATCCTTCAGTATGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGAATCAAGGAGCAAACTGATTTGGGTTCTTGGTTACTGAATCGCTGCAGATCCTATTTGCAGTACTGAAAGCATTCTATCTGTAAGAACGGTGTTTATATGCACAAATTTTCTGTAATGTGAAATGTAGTTATTTTACCTTAGGATGTTGAACTAGATTTGAATCCACAGTTATGATGGCTAAAGATATACAAGGTTTAGAAAATATACACCCAACCGACTGATTTGATATTTAGCCTGTAATTGAATGACAGAAAATATATCTTTAAACACTATTGTTATCGTAATTAACAAGGCATACGATTGTACGGAGTAGTTATAGAAAAAGATATCCTCCTTTTCTCTAGACTCTAGGTGTGTATGAGAAAAGAACGGTGGTGACTGGCGAGCCTGTGAATATGTGGCATGTGAACCACCATTGAGCCTGTTGGTTTGGCTACCATGGAATAGTAGACATATTCGAGCTAATGATTTTACCAGGATTATCTAATAAATGTACATAAGTGATGTAACAATTCAATTCAATTCAAATTATTTATTTATTTGATTAGTTTTAGTCTGTACCGA

Coding sequence (CDS)

ATGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGA

Protein sequence

MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20081	Spo20081	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20081.1	Spo20081.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20081.1.exon.1	Spo20081.1.exon.1	exon
Spo20081.1.exon.2	Spo20081.1.exon.2	exon
Spo20081.1.exon.3	Spo20081.1.exon.3	exon
Spo20081.1.exon.4	Spo20081.1.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20081.1.utr5p.1	Spo20081.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20081.1.CDS.1	Spo20081.1.CDS.1	CDS
Spo20081.1.CDS.2	Spo20081.1.CDS.2	CDS
Spo20081.1.CDS.3	Spo20081.1.CDS.3	CDS
Spo20081.1.CDS.4	Spo20081.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20081.1.utr3p.1	Spo20081.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo20081.1 vs. NCBI nr
Match: gi|731320475|ref|XP_010670826.1| (PREDICTED: enhancer of rudimentary homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 192.2 bits (487), Expect = 4.500e-46
Identity = 91/102 (89.22%), Postives = 98/102 (96.08%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           MDN+HTIILMQTS NR+SRTFMDYESISQAMDGICALYE+KLKEINPTLRNISYDIGDLY
Sbjct: 1   MDNRHTIILMQTSQNRASRTFMDYESISQAMDGICALYERKLKEINPTLRNISYDIGDLY 60

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
           NF+DGLADLS LV++HSIQ YLPYDREWIKQ+ LQRLKKLAR
Sbjct: 61  NFIDGLADLSGLVYEHSIQAYLPYDREWIKQKALQRLKKLAR 102

[Close]

BLAST of Spo20081.1 vs. NCBI nr
Match: gi|902145971|gb|KNA05017.1| (hypothetical protein SOVF_194310 [Spinacia oleracea])

HSP 1 Score: 191.0 bits (484), Expect = 9.900e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 10  MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL 69
           MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL
Sbjct: 1   MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL 60

Query: 70  SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
           SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR
Sbjct: 61  SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 93

[Close]

BLAST of Spo20081.1 vs. NCBI nr
Match: gi|657971666|ref|XP_008377624.1| (PREDICTED: enhancer of rudimentary homolog [Malus domestica])

HSP 1 Score: 183.3 bits (464), Expect = 2.100e-43
Identity = 83/101 (82.18%), Postives = 97/101 (96.04%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           M NKHTIILMQTSHN++SRTFMDY+SISQAMDGIC LYE+KL+E+NP +R+ISYDIGDLY
Sbjct: 1   MANKHTIILMQTSHNKASRTFMDYDSISQAMDGICGLYERKLRELNPAIRDISYDIGDLY 60

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           NF+DGLAD+SALV+DHSIQGYLPYDR+WIKQRTL+ L+KLA
Sbjct: 61  NFIDGLADMSALVYDHSIQGYLPYDRQWIKQRTLRHLQKLA 101

[Close]

BLAST of Spo20081.1 vs. NCBI nr
Match: gi|657945322|ref|XP_008379272.1| (PREDICTED: enhancer of rudimentary homolog [Malus domestica])

HSP 1 Score: 181.0 bits (458), Expect = 1.000e-42
Identity = 82/101 (81.19%), Postives = 96/101 (95.05%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           M NKHTIILMQTSHN++SRTFMDY+SISQAMDGIC LYE+KL+E+NP +R+ISYDIGDLY
Sbjct: 1   MANKHTIILMQTSHNKASRTFMDYDSISQAMDGICGLYERKLRELNPAIRDISYDIGDLY 60

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           NF+DGLAD+SALV+DHSIQ YLPYDR+WIKQRTL+ L+KLA
Sbjct: 61  NFIDGLADMSALVYDHSIQAYLPYDRQWIKQRTLRHLQKLA 101

[Close]

BLAST of Spo20081.1 vs. NCBI nr
Match: gi|720071930|ref|XP_010278207.1| (PREDICTED: enhancer of rudimentary homolog [Nelumbo nucifera])

HSP 1 Score: 179.1 bits (453), Expect = 3.900e-42
Identity = 82/101 (81.19%), Postives = 94/101 (93.07%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           M N+HTIILMQTS NR++RTFMDYESISQAMDGIC+LYE+KLK++NP +RNI+YDI DLY
Sbjct: 1   MANRHTIILMQTSQNRATRTFMDYESISQAMDGICSLYERKLKDLNPAIRNITYDIADLY 60

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           NF+DGLADLSALV+DHSIQ YLPYDR+WIKQRT Q LKKLA
Sbjct: 61  NFIDGLADLSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 101

[Close]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCL7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194310 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.900e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 10  MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL 69
           MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL
Sbjct: 1   MQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADL 60

Query: 70  SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
           SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR
Sbjct: 61  SALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 93

[Close]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: M1CHJ6_SOLTU (Enhancer of rudimentary homolog OS=Solanum tuberosum GN=PGSC0003DMG400026283 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.600e-42
Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           M N+HTI+LMQTS NR++RTFMDYESISQAMDGICALYE+KLKE+NP +R I+YDI DLY
Sbjct: 1   MANRHTIVLMQTSQNRATRTFMDYESISQAMDGICALYERKLKELNPAIREITYDISDLY 60

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           NF+DGLAD+SALV+DHSIQ YLPYDR+WIKQ+TLQ LKKLA
Sbjct: 61  NFIDGLADMSALVYDHSIQAYLPYDRQWIKQKTLQHLKKLA 101

[Close]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: M5XNP3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012055mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.000e-41
Identity = 80/101 (79.21%), Postives = 94/101 (93.07%), Query Frame = 1


		  
Query: 1   MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLY 60
           M NKHTIILMQTS N+++RTFMDY+SISQAMDGIC LYE+KL+E+NP +RNISYDIGDLY
Sbjct: 84  MANKHTIILMQTSQNKATRTFMDYDSISQAMDGICGLYERKLRELNPAIRNISYDIGDLY 143

Query: 61  NFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           NF+DGL D+SALV+DHSIQ YLPYDR+WIKQRTL+ L+KLA
Sbjct: 144 NFIDGLTDMSALVYDHSIQAYLPYDRQWIKQRTLRHLQKLA 184

[Close]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: W9RNN8_9ROSA (Enhancer of rudimentary homolog OS=Morus notabilis GN=L484_025492 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.300e-41
Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1


		  
Query: 3   NKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNF 62
           NKHTIILMQTS NR++RTFMDY SISQA+DGIC LYE+KLKE+NP +RNISYDI DLYNF
Sbjct: 19  NKHTIILMQTSQNRATRTFMDYASISQAIDGICGLYERKLKELNPAIRNISYDIADLYNF 78

Query: 63  VDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           +DGLAD+SALV+DHSIQ YLPYDR+WIKQRT Q LKKLA
Sbjct: 79  IDGLADMSALVYDHSIQAYLPYDRQWIKQRTFQHLKKLA 117

[Close]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: W1PAX4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00019p00053160 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.300e-41
Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1


		  
Query: 3   NKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNF 62
           N+HTIILMQT+ NR++RTFMDY+SISQAMDGIC LYE+KLKE+NP +RNI YDI DLYNF
Sbjct: 27  NRHTIILMQTAQNRATRTFMDYDSISQAMDGICGLYERKLKELNPAMRNIQYDITDLYNF 86

Query: 63  VDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           +DGLADLSALVFDHSIQ YLPYDR+WIKQRT Q LKKLA
Sbjct: 87  IDGLADLSALVFDHSIQAYLPYDRQWIKQRTFQHLKKLA 125

[Close]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_ARATH (Enhancer of rudimentary homolog OS=Arabidopsis thaliana GN=At5g10810 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.100e-39
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1


		  
Query: 3   NKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNF 62
           ++HTIIL+Q S +R++RTFMDY+SI QAMDGIC LYE+KLKEINP+LRNISYDI DLYNF
Sbjct: 7   SRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLYNF 66

Query: 63  VDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           +DGLADLSALV+DHSI  YLPYDR+WIKQ+    LK++A
Sbjct: 67  IDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIA 105

[Close]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_DICDI (Enhancer of rudimentary homolog OS=Dictyostelium discoideum GN=erh PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.100e-27
Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 1


		  
Query: 5   HTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVD 64
           HTI+L+QT+  +SSRTFMDYES++QA++GIC +YE++LK+  P  +NI+YDI  L+ F+D
Sbjct: 3   HTIVLLQTTMGKSSRTFMDYESVNQAIEGICNMYEQRLKQERPNQKNITYDISQLFKFID 62

Query: 65  GLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
            LADLS LV+   I  Y PY++EWIK + +  L+KLA+
Sbjct: 63  SLADLSCLVYTSHINAYTPYNKEWIKTKIINHLQKLAQ 100

[Close]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_AEDAE (Enhancer of rudimentary homolog OS=Aedes aegypti PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.400e-22
Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 1


		  
Query: 5   HTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVD 64
           HTI+L+Q   N  +RT+ DYES+++ M+G+C +YE+ LK  NP    I+YDI  L++FVD
Sbjct: 3   HTILLVQPGRNPETRTYSDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFVD 62

Query: 65  GLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
            LADLS LV+  S   Y PY++EWIK++    L++ A
Sbjct: 63  QLADLSCLVYQKSTNTYAPYNKEWIKEKIYVLLRQAA 99

[Close]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_DANRE (Enhancer of rudimentary homolog OS=Danio rerio GN=erh PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.900e-21
Identity = 44/98 (44.90%), Postives = 69/98 (70.41%), Query Frame = 1


		  
Query: 5   HTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVD 64
           HTI+L+Q +     RT+ DYES+++ M+G+C +YE+ LK +NP   +I+YDI  L++FVD
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFVD 62

Query: 65  GLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
            LADLS LV+    Q Y PY+++WIK++    L++ A+
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQ 100

[Close]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_BOVIN (Enhancer of rudimentary homolog OS=Bos taurus GN=ERH PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.800e-21
Identity = 43/98 (43.88%), Postives = 69/98 (70.41%), Query Frame = 1


		  
Query: 5   HTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVD 64
           HTI+L+Q +     RT+ DYES+++ M+G+C +YE+ LK +NP   +I+YDI  L++F+D
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFID 62

Query: 65  GLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR 103
            LADLS LV+    Q Y PY+++WIK++    L++ A+
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQ 100

[Close]

BLAST of Spo20081.1 vs. TAIR (Arabidopsis)
Match: AT5G10810.1 (enhancer of rudimentary protein, putative)

HSP 1 Score: 162.2 bits (409), Expect = 1.700e-40
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1


		  
Query: 3   NKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNF 62
           ++HTIIL+Q S +R++RTFMDY+SI QAMDGIC LYE+KLKEINP+LRNISYDI DLYNF
Sbjct: 7   SRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLYNF 66

Query: 63  VDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLA 102
           +DGLADLSALV+DHSI  YLPYDR+WIKQ+    LK++A
Sbjct: 67  IDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIA 105

The following BLAST results are available for this feature:

BLAST of Spo20081.1 vs. NCBI nr
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
BLAST of Spo20081.1 vs. TAIR (Arabidopsis)

BLAST of Spo20081.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731320475\|ref\|XP_010670826.1\|	4.5e-46	89.2	PREDICTED: enhancer of rudimen...	[more]
gi\|902145971\|gb\|KNA05017.1\|	9.9e-46	100.	hypothetical protein SOVF_1943...	[more]
gi\|657971666\|ref\|XP_008377624.1\|	2.1e-43	82.1	PREDICTED: enhancer of rudimen...	[more]
gi\|657945322\|ref\|XP_008379272.1\|	1.0e-42	81.1	PREDICTED: enhancer of rudimen...	[more]
gi\|720071930\|ref\|XP_010278207.1\|	3.9e-42	81.1	PREDICTED: enhancer of rudimen...	[more]

BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QCL7_SPIOL	6.9e-46	100.	Uncharacterized protein OS=Spi...	[more]
M1CHJ6_SOLTU	4.6e-42	80.2	Enhancer of rudimentary homolo...	[more]
M5XNP3_PRUPE	1.0e-41	79.2	Uncharacterized protein OS=Pru...	[more]
W9RNN8_9ROSA	2.3e-41	81.8	Enhancer of rudimentary homolo...	[more]
W1PAX4_AMBTC	2.3e-41	81.8	Uncharacterized protein OS=Amb...	[more]

BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ERH_ARATH	3.1e-39	73.7	Enhancer of rudimentary homolo...	[more]
ERH_DICDI	2.1e-27	54.0	Enhancer of rudimentary homolo...	[more]
ERH_AEDAE	3.4e-22	47.4	Enhancer of rudimentary homolo...	[more]
ERH_DANRE	2.9e-21	44.9	Enhancer of rudimentary homolo...	[more]
ERH_BOVIN	3.8e-21	43.8	Enhancer of rudimentary homolo...	[more]

BLAST of Spo20081.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G10810.1	1.7e-40	73.7	enhancer of rudimentary protei...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000781	Enhancer of rudimentary	PRODOM	PD008105		coord: 31..101 score: 2.0
IPR000781	Enhancer of rudimentary	PIR	PIRSF016393	Enhancer_rudimentary	coord: 1..102 score: 6.6
IPR000781	Enhancer of rudimentary	PANTHER	PTHR12373	ENHANCER OF RUDIMENTARY ERH	coord: 1..101 score: 1.1
IPR000781	Enhancer of rudimentary	PFAM	PF01133	ER	coord: 4..100 score: 4.9
IPR000781	Enhancer of rudimentary	unknown	SSF143875	ERH-like	coord: 4..101 score: 2.75

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0045747	positive regulation of Notch signaling pathway
biological_process	GO:0006221	pyrimidine nucleotide biosynthetic process