Spo20101.1 (mRNA) | SpinachBase

Overview


Name	Spo20101.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(Homeodomain-related) (Myb-like transcription factor family protein)
Location	SpoScf_00437 : 317823 .. 324638 (+)
Sequence length	3555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATGGAGTATTTTTATTTCGTTTCTCTCCTTCTGTTCTCGATAAAATTCCAATTCTCAAATTAATTGATAAAATCCTCTTAGCATTCAAATTGCCACCGAAATCGAAGGATTGAAACCTCCACTGTGTAAACTCGTGAAATTAGTTTAGAGTTTTGCTATGTAACCTATGCGCTCGATGTTTAATTAGTTAAATAAGAGGTAGTACTGTTTTTCTGGGTTTGAAGCTAAAAGAGGAACTGGGATTTCTGGGTTTTTTTGTTTTATTAGGGTGGGAATACGTGACATGTGAGTTGTTCATTACATATGGAATTGAACTCACTGAAGATTTGAGTTTTGATAATGTCATGGGAAAATGTAAGGCATTTAGGGATGCACAGAAGGTGTTTGATGAAATGTTTGGGAGAAATGTTGTTTCTTGGACTTGTATCCCGTGTATGCTTGATGGGTATGTTTATTGTGAGGACTTGATTAGTGCAGAAAGGGAGTTCGATGCAATGCCGAAGAGAAATCAGGTCTCATGGAATGCCATGATATTGAAGGAGAAGACAGAGATGAAGCAGAGAGCTCAAAGAGGAAGAAGGGAAAATCAAAGGAGAAAGGAAGGAAGCAAAGGAGGGAAAACTAAAAAAAAAAGGAATTGGGCTCCAAAAAACAAGGAAAAATCTTCTATAAAATGGGCATGTTGATTGACATATTAGTCAACTCCAACTCGATACGACGACTCTGCTTGAACCATCTCTACAGAGAAGTTATCTGGGAAAGAAAGGGGAGCTTAAATAATAATTGGTGACGTGGTATAACTGTCAGGAAAATACTGTTGCGAGAATTGAAGTATTCCGTCCATTTAATATTTTGGCGCTCAAAAACACAATTCAACACTTTTCCCTGTTACTCTTCTTTGATCAAACCCAAACACTAAAACATTCAAGAACAACGTCTCTCTCCTCCCCCTGTAACTCAACTCTGATTAAACCCAAACACTAAAATCTTTCAAGACTGTAATCGCCATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATATGGCGTAAGTTCTTCTGCTTAATTCTTTAACTGGGTTTTATTTTTTAGATTCTTAATGTTAGTCTAATAGTCTTCTCCAATTTCTTTTGCATGATCGAATTTCTGTTAATGATATCTTACGAGTGAATTAGTGCTTCATTCAACTTGTTGTTTACTTTCCTGATCAGTTTCTTCCATTTTTATCATCATTTTCTGTCCTCGTCAAAATATTAGTGAAATCATCCTGTCGTACTTGTGTTCAATTGATTATTTCTTGTCAGTTGAATGTTATGGATGTTGAGGATGTTCTTGAGTCTGGCTTTGATGATAATGAGACTGAATTTGATGTAATAATATTATGTAATAATTATATTGATGTAATAATATTGATGTAATAATATTATTTACCTCTCAATTTACTTCTGCATTATCGTTTTTCTGGGTTAATTGAACCTTCTGAATGACTTTTAATGGCGAATTAACAGAAAAGAATCAAAGGGGTACGTGTTAAAATTATAAGGTCACGAATGGCTGCCATTACTAAGCTTCGTTTTCATTCATGGAGTTCCACTAACTATGACATTACATCATCTAACTATAACTACGACTTACAAAAACAGAAATATGCCCATGTACATCCTCCAAACAACTTCTTGTTTCTGAATCACCAACTTTTTGGCTTTATTCAACTTGGCATAAACTAGAACAAAAGCTTAGTTTCTTAGGATTTTGGTTTATGTTTTTAATCTCGTTACAATAATATTGGTGTTGTTACCATGAAATCGTTCATCTCGTACTTTGTTCAACTGATTAATGCATCTCGGTTACCTTCTTGAATGAAGTAAATGTTAATTTGTTGGCTGAAATGCTGGGTGTAATAACAAATTCATGTGACATGCTTGGTTTTCTTTGATAGATTTGTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTTACAATGAGCTTCCTGAAAGTGGTGAAAAATCTGTGATAGCTGAGCCAGATGAGCCCCTCCGACAGATAAGTACAGACTTAGTACTGGCAGCTCCATGTTGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAATGAGGGAAACTGGTTCAAGTGGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAGGTATGCTTGAGAACCATCAGTTACGTCATCAGTATATTTTTAAGCAATTATCTTCGAACATGTTGCTCTCATTAGTCATTACTGATCATCTACGATTCTGAACGAAGGGGTCTCGGGTTCATACCATTTGGAAAGCCCTGGCACAAGTAATTCTTCTTCAAGCTTGCCAATATCTAACATGGATGAGTAAGAACTTGTGAATCTCATTTTATATTTATGGCCTTATTAATTTTTTTGCTCTTAAACATCTAGTATTTGCTAACACTCTGGTGAATTGCGCTTGAGAAGGTTGCAGGTGCAGACTAAACTACATTTGCAGGTTGAGGTATGGAAGTTCCCTAGGTTCTAGTGCATGTAAAATTAAGGCTTCACTCTTAATCCCTGAAAAATATTTATTTTGAATGTATAGGGACTTGGCTTAACTTATTTGAACTTAATTTTCCTCAAAACTTAATTTCAGTAAAGTGCAAAGAACAAACCTTTGAATTGTTGATTTTGTGGTCTATCACTAATTGTTTTCTGCCAGAAGTTGAAGGCAATTGATCAGTTTGTTTATTTCTTTACTTATTGTAGGCTGAGAAGCACTTACAGCTACGCCAGGATGCAGAACGAAGATACATGGCGGTGATGCTTGAAAGAGTTTGTAAGATACTTTGACCGATAGTTACCCATGTCTATTTTCATTTTTCTTGTATGCTTCTGGCGCTGTTTAGAATTTAAAATCATTGTACAACATCCTGACATTGTTTACATTGCAACCTTATGCGGGAACTTTGGTTTGGGAAATTTAATGAAGTTATCGTGTAACAATTGAGGCCGTAACAGCTTCCTGTAAGTCTACGCTTGACAATCCGGTGATAGAAAAAAGTTTATTTGTTACTGTTGTATTATCCTGCCTGATATATGTCTGATAATAGACCTGTAATATCCATTGTTCTCTATTTTGAATAAATATGTTCAGTTTGTTCCCCGCCTACCTAATTGCTCATGCTTATGGTATTGTGGAAAATGTGTATAGGTCAACAAGCCACTCAACCTGGAGACAACCTTATTCCACCAGCACCGCAGCTAACTACAGACTTCCCATCTGAGACATATTCACCGTATCTTTACACAAATAATTGTGCATGGCATAAACAGGTCTGGTTCTGATGTTTGAAACAGTCAAATTTCTGATGCTTGGTTTTTTACTAAGGAATAGTAAGAATGCCTAACAATTAATACTGATCTAATGTTGGTAGAATATTTTTATCGAGATATATAGAACATGGGGGTAATATGCTGGACTAAATTCCCTTCAAATACTATTTTATAGAGATATTAGTGGCTTGAACATGAACGACTGATTTATAATTGTGTACTAGTAGAGATGCATTGTCTTAGGACACTTGAAATTAAGATTAATATAATTTAGTGGTTTATGTAACACCAATTTTATGTGACATATTTGCTATTCTTTAGATTTGTGCTTGACGATTTAATATTTTGATATCATGATTTTCCTGAAATAGATACCAGATTTTAAAGGTTGATTATCTCTGTTTTTCAGTTGAATGTTAGGGAAGTTGAGGAAGATATATCTCATGCTTCGAGTCAAACTAATATGTCCGGGCCTCCATCTCTGGGGAATTCTACTTCTGTTCAGACAAGTCTCCCTGAATTAGAGCCATCCGAGCCATCTCAAGGGATGGGGTCTCAACAATTTTCTCATGTTAGGGACAGTGCTTCAATCAGCCATCAACTTTCCCATTCTGATTTGTTAACGTTAATGAGAAATATGGCGAATTCTGCCTCTGCTCAAGGCCTGCCATATCTACCTGCATTAGAGCAATCTCCATGGATGGGGCCTCATCAACTTCCTCATAACAGTATCACTGCTTCAACACGCGAGAGGCCAATGCCCAGCCTTCAACCTGGTGGGGATCAAGTTGTTCCTTTCTATCCTGGTTTGGTAATGGTCACCAGTAGTATGTCGGATCAAGTTATTCCTTTTTATCCTACTTCTGCTGGAGTCAATGCCCCAATATTTCAGTCGCAGCCTCGATACAGTTCAACAAATCAATATGCATTAGTGTCATCTCCATGGCTGGAGTCTCATATCAGGAACGCTGCTTCATGTAGCCAGAGTCCAAATCCTTATCAGTTGAGATCTGGTTCAGGTATGATAGTTTATCACTTTCTTACTCAGATACCAACCATTACATGACAGTGTTGTATTATAACCCAGAAGGTTGGACATATGTCTATTTTCAATTGTCTTCTGGCGCTGTTTGCACTTTGACATTACTTACATTTTACCTATATTGGATTGGGATGAAGTTTTCGAGTAACAACTGAGGCCGTAACAACATTCTCTAAGAGAATATGCACAAAAGTGCATACTTGTCTCTAAGAGAATATGCACATACGTTTTGAATAAATCTTCAGTTTGTTCCCTGCATACCTTATACCTTATAGCTTAATGCTATGATAATGGAAAATCTATCATGAATCTTATGGTATTGGGAAAAATGCGCAGGTCGACAAGCGCAGCAAGGACCCCCAGCTGGATTCAACCTTTCTTCATCAGCACCACAGCTAACCACTCAGACCATAACAACATTCTGTAAGTCTTTGTTAGTGAAACAGAAAAACATTTTTCCTACTTGTCCCTAAAAGAGTATGTTTTAAATAAATTTTCAGTTTGTTAATTCCCTGCATATACCTTATATCTTAATGCTTAGGATAATGTCAAATCTGTCATGAATCTTATGGTATTGGAAAAAATGTATACAGGTCGACATACGCTGCAAGGCCCCCCACCTGGATTCAACCATTCTCTATCAGCACCACAGATAAGAACTGAGACCATAAGAACAATTTGTAAGTCTTTGTTAGGAAAACAAAAAAACATTTTCATACTTGTCTCTAAGAGAATATGTTTTGAATACCTTATACCTTAATACCTTATAGCTCAATGCTTATGACAATGTCAAATCTGTCATGAATCTTATTATGGTATGGGGAAAAATGTGTACAGATCGACAAGTGCATCGAGGCCCCCCACCTGGATTCAACCATCCTCCATCAGCACCACAACTAACAAACGCAGCACGTCCGCTTCAGCTTCGTCTTCATAATTTTCTTACAGAATGGCAGGTGTGGTTCTGTTGTTTAACCCATCCAATTTCTTTTACTTGGTTTATTACTAAGGAATAATCCCAAATCATTTTTGGGACTAAGGCTTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTAGTATTATTAAGGAATAATAAGAATGAACAACAATCAAATACTGATCAAATAATGAGATAGGTTACCTAGAATTTTTTATCAGGACATGTTGAACATGTGGTAATGTGCTGGACTAAACTCCCTTCCATTGCTGTTTCTAAAGATATTAGTGGCTGGGACATGAATGACGGGAACGCCTGATTGATACTAGTAGAGATTACTTGAACTTCATTTTCATAGTTTCAAAGTTTCAATAGTCGTTAGAATAAAGTTCGATTCATGAATCAGATAATCATATTTATATTACTTTGCTTGTGCATTCTGCAGTTAATATGGAATGATATGAATAGGGAGAGACATGATACTTTGGGGTCTGGCGTGAATAATTCCCAAAATCTGCAGAGCATGATTGCTCCATTGAAGTCTGAAGTGGCTGATTTAAGAAATCAAATTTTCAAGCTAGAAGCTGAGTTAAATGAAGCAGAAAACCAGGAATCCAGGGATCCTGATAATGCAGAGGAGCCTTAATGGACTGAACTTCCAGGATTTGGTAGTTGCAATTCCTGTTGTCTTTAGCTGATTTCTATAAAAAACATGCACTGTAGTATGTTCCTAGATGTCACCTGAATGTTCTCTGCTATCAGGCAGCCGTTGTCTGAATTGTTTTGGACATAGTAATAATGAGTTTTAATTCGTGATACGGGAATGTGGATGATACTCCTTTACCTTTACTTCATTCCTCATATGCAATTTATGCATTCTGATAGATTTTTTTTTTATCAGACTCTATCTGTTGTTAAACAATCAACCATCTCCTGCTTGTATTACAATTAATTGTGATGCCTCCTTCATGATCCCACTCTAAACCACAGCGGAGAATGAATGGAAGGAACATCAATGGCTATTTATGCACAGGACGCGTTTTCAGCTGAGTTGTTGGCCGTAAAAAGTTCTTTCCTGGATTGAAGGGAGAAACTGGAATGTCTGCACTATTTCTTAACTGTGTAATGAGATCAATGGGAGTTCGTTCAGTTTGTAATTCAAGGCACAAATCCATCATTGATGTTTGTAAGGCAGGAATTAGGCAGCTTCATGGAGCAAGATTGATTTTTGAAGGACGACGCGCCAACAAAGTTGCTGATTTTCTGGCCAAGGAAAAACTGTAATTTGTGTAATCAAAATCGTATTATTCAAAACCCACCCCTTGATTGTATTAATCTTCTTTGTGATGACGCTTCTACCGTCTCTTTTGAGAACCAAGGTCATGTCAGAGATGCTCATGAACCAAACAATGATGCTATTGTAAATTTGTAATTGTAAGCGCTGCC

mRNA sequence

GGATGGAGTATTTTTATTTCGTTTCTCTCCTTCTGTTCTCGATAAAATTCCAATTCTCAAATTAATTGATAAAATCCTCTTAGCATTCAAATTGCCACCGAAATCGAAGGATTGAAACCTCCACTGTGTAAACTCGTGAAATTAGTTTAGAGTTTTGCTATGTAACCTATGCGCTCGATGTTTAATTAGTTAAATAAGAGGTAGTACTGTTTTTCTGGGTTTGAAGCTAAAAGAGGAACTGGGATTTCTGGGTTTTTTTGTTTTATTAGGGTGGGAATACGTGACATGTGAGTTGTTCATTACATATGGAATTGAACTCACTGAAGATTTGAGTTTTGATAATGTCATGGGAAAATGTAAGGCATTTAGGGATGCACAGAAGGTGTTTGATGAAATGTTTGGGAGAAATGTTGTTTCTTGGACTTGTATCCCGTGTATGCTTGATGGGTATGTTTATTGTGAGGACTTGATTAGTGCAGAAAGGGAGTTCGATGCAATGCCGAAGAGAAATCAGGTCTCATGGAATGCCATGATATTGAAGGAGAAGACAGAGATGAAGCAGAGAGCTCAAAGAGGAAGAAGGGAAAATCAAAGGAGAAAGGAAGGAAGCAAAGGAGGGAAAACTAAAAAAAAAAGGAATTGGGCTCCAAAAAACAAGGAAAAATCTTCTATAAAATGGGCATGTTGATTGACATATTAGTCAACTCCAACTCGATACGACGACTCTGCTTGAACCATCTCTACAGAGAAGTTATCTGGGAAAGAAAGGGGAGCTTAAATAATAATTGGTGACGTGGTATAACTGTCAGGAAAATACTGTTGCGAGAATTGAAGTATTCCGTCCATTTAATATTTTGGCGCTCAAAAACACAATTCAACACTTTTCCCTGTTACTCTTCTTTGATCAAACCCAAACACTAAAACATTCAAGAACAACGTCTCTCTCCTCCCCCTGTAACTCAACTCTGATTAAACCCAAACACTAAAATCTTTCAAGACTGTAATCGCCATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATATGGCATTTGTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTTACAATGAGCTTCCTGAAAGTGGTGAAAAATCTGTGATAGCTGAGCCAGATGAGCCCCTCCGACAGATAAGTACAGACTTAGTACTGGCAGCTCCATGTTGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAATGAGGGAAACTGGTTCAAGTGGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAGGGGTCTCGGGTTCATACCATTTGGAAAGCCCTGGCACAAGTAATTCTTCTTCAAGCTTGCCAATATCTAACATGGATGAGTTGCAGGTGCAGACTAAACTACATTTGCAGGTTGAGGCTGAGAAGCACTTACAGCTACGCCAGGATGCAGAACGAAGATACATGGCGGTGATGCTTGAAAGAGTTTGTCAACAAGCCACTCAACCTGGAGACAACCTTATTCCACCAGCACCGCAGCTAACTACAGACTTCCCATCTGAGACATATTCACCGTATCTTTACACAAATAATTGTGCATGGCATAAACAGTTGAATGTTAGGGAAGTTGAGGAAGATATATCTCATGCTTCGAGTCAAACTAATATGTCCGGGCCTCCATCTCTGGGGAATTCTACTTCTGTTCAGACAAGTCTCCCTGAATTAGAGCCATCCGAGCCATCTCAAGGGATGGGGTCTCAACAATTTTCTCATGTTAGGGACAGTGCTTCAATCAGCCATCAACTTTCCCATTCTGATTTGTTAACGTTAATGAGAAATATGGCGAATTCTGCCTCTGCTCAAGGCCTGCCATATCTACCTGCATTAGAGCAATCTCCATGGATGGGGCCTCATCAACTTCCTCATAACAGTATCACTGCTTCAACACGCGAGAGGCCAATGCCCAGCCTTCAACCTGGTGGGGATCAAGTTGTTCCTTTCTATCCTGGTTTGGTAATGGTCACCAGTAGTATGTCGGATCAAGTTATTCCTTTTTATCCTACTTCTGCTGGAGTCAATGCCCCAATATTTCAGTCGCAGCCTCGATACAGTTCAACAAATCAATATGCATTAGTGTCATCTCCATGGCTGGAGTCTCATATCAGGAACGCTGCTTCATGTAGCCAGAGTCCAAATCCTTATCAGTTGAGATCTGGTTCAGGTCGACAAGCGCAGCAAGGACCCCCAGCTGGATTCAACCTTTCTTCATCAGCACCACAGCTAACCACTCAGACCATAACAACATTCTGTCGACATACGCTGCAAGGCCCCCCACCTGGATTCAACCATTCTCTATCAGCACCACAGATAAGAACTGAGACCATAAGAACAATTTATCGACAAGTGCATCGAGGCCCCCCACCTGGATTCAACCATCCTCCATCAGCACCACAACTAACAAACGCAGCACGTCCGCTTCAGCTTCGTCTTCATAATTTTCTTACAGAATGGCAGTTAATATGGAATGATATGAATAGGGAGAGACATGATACTTTGGGGTCTGGCGTGAATAATTCCCAAAATCTGCAGAGCATGATTGCTCCATTGAAGTCTGAAGTGGCTGATTTAAGAAATCAAATTTTCAAGCTAGAAGCTGAGTTAAATGAAGCAGAAAACCAGGAATCCAGGGATCCTGATAATGCAGAGGAGCCTTAATGGACTGAACTTCCAGGATTTGGTAGTTGCAATTCCTGTTGTCTTTAGCTGATTTCTATAAAAAACATGCACTGTAGTATGTTCCTAGATGTCACCTGAATGTTCTCTGCTATCAGGCAGCCGTTGTCTGAATTGTTTTGGACATAGTAATAATGAGTTTTAATTCGTGATACGGGAATGTGGATGATACTCCTTTACCTTTACTTCATTCCTCATATGCAATTTATGCATTCTGATAGATTTTTTTTTTATCAGACTCTATCTGTTGTTAAACAATCAACCATCTCCTGCTTGTATTACAATTAATTGTGATGCCTCCTTCATGATCCCACTCTAAACCACAGCGGAGAATGAATGGAAGGAACATCAATGGCTATTTATGCACAGGACGCGTTTTCAGCTGAGTTGTTGGCCGTAAAAAGTTCTTTCCTGGATTGAAGGGAGAAACTGGAATGTCTGCACTATTTCTTAACTGTGTAATGAGATCAATGGGAGTTCGTTCAGTTTGTAATTCAAGGCACAAATCCATCATTGATGTTTGTAAGGCAGGAATTAGGCAGCTTCATGGAGCAAGATTGATTTTTGAAGGACGACGCGCCAACAAAGTTGCTGATTTTCTGGCCAAGGAAAAACTGTAATTTGTGTAATCAAAATCGTATTATTCAAAACCCACCCCTTGATTGTATTAATCTTCTTTGTGATGACGCTTCTACCGTCTCTTTTGAGAACCAAGGTCATGTCAGAGATGCTCATGAACCAAACAATGATGCTATTGTAAATTTGTAATTGTAAGCGCTGCC

Coding sequence (CDS)

ATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATATGGCATTTGTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTTACAATGAGCTTCCTGAAAGTGGTGAAAAATCTGTGATAGCTGAGCCAGATGAGCCCCTCCGACAGATAAGTACAGACTTAGTACTGGCAGCTCCATGTTGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAATGAGGGAAACTGGTTCAAGTGGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAGGGGTCTCGGGTTCATACCATTTGGAAAGCCCTGGCACAAGTAATTCTTCTTCAAGCTTGCCAATATCTAACATGGATGAGTTGCAGGTGCAGACTAAACTACATTTGCAGGTTGAGGCTGAGAAGCACTTACAGCTACGCCAGGATGCAGAACGAAGATACATGGCGGTGATGCTTGAAAGAGTTTGTCAACAAGCCACTCAACCTGGAGACAACCTTATTCCACCAGCACCGCAGCTAACTACAGACTTCCCATCTGAGACATATTCACCGTATCTTTACACAAATAATTGTGCATGGCATAAACAGTTGAATGTTAGGGAAGTTGAGGAAGATATATCTCATGCTTCGAGTCAAACTAATATGTCCGGGCCTCCATCTCTGGGGAATTCTACTTCTGTTCAGACAAGTCTCCCTGAATTAGAGCCATCCGAGCCATCTCAAGGGATGGGGTCTCAACAATTTTCTCATGTTAGGGACAGTGCTTCAATCAGCCATCAACTTTCCCATTCTGATTTGTTAACGTTAATGAGAAATATGGCGAATTCTGCCTCTGCTCAAGGCCTGCCATATCTACCTGCATTAGAGCAATCTCCATGGATGGGGCCTCATCAACTTCCTCATAACAGTATCACTGCTTCAACACGCGAGAGGCCAATGCCCAGCCTTCAACCTGGTGGGGATCAAGTTGTTCCTTTCTATCCTGGTTTGGTAATGGTCACCAGTAGTATGTCGGATCAAGTTATTCCTTTTTATCCTACTTCTGCTGGAGTCAATGCCCCAATATTTCAGTCGCAGCCTCGATACAGTTCAACAAATCAATATGCATTAGTGTCATCTCCATGGCTGGAGTCTCATATCAGGAACGCTGCTTCATGTAGCCAGAGTCCAAATCCTTATCAGTTGAGATCTGGTTCAGGTCGACAAGCGCAGCAAGGACCCCCAGCTGGATTCAACCTTTCTTCATCAGCACCACAGCTAACCACTCAGACCATAACAACATTCTGTCGACATACGCTGCAAGGCCCCCCACCTGGATTCAACCATTCTCTATCAGCACCACAGATAAGAACTGAGACCATAAGAACAATTTATCGACAAGTGCATCGAGGCCCCCCACCTGGATTCAACCATCCTCCATCAGCACCACAACTAACAAACGCAGCACGTCCGCTTCAGCTTCGTCTTCATAATTTTCTTACAGAATGGCAGTTAATATGGAATGATATGAATAGGGAGAGACATGATACTTTGGGGTCTGGCGTGAATAATTCCCAAAATCTGCAGAGCATGATTGCTCCATTGAAGTCTGAAGTGGCTGATTTAAGAAATCAAATTTTCAAGCTAGAAGCTGAGTTAAATGAAGCAGAAAACCAGGAATCCAGGGATCCTGATAATGCAGAGGAGCCTTAA

Protein sequence

MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPLRQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLESPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQPGDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLGNSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGLPYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVIPFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQAQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVHRGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQSMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20101	Spo20101	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20101.1	Spo20101.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20101.1.exon.1	Spo20101.1.exon.1	exon
Spo20101.1.exon.2	Spo20101.1.exon.2	exon
Spo20101.1.exon.3	Spo20101.1.exon.3	exon
Spo20101.1.exon.4	Spo20101.1.exon.4	exon
Spo20101.1.exon.5	Spo20101.1.exon.5	exon
Spo20101.1.exon.6	Spo20101.1.exon.6	exon
Spo20101.1.exon.7	Spo20101.1.exon.7	exon
Spo20101.1.exon.8	Spo20101.1.exon.8	exon
Spo20101.1.exon.9	Spo20101.1.exon.9	exon
Spo20101.1.exon.10	Spo20101.1.exon.10	exon
Spo20101.1.exon.11	Spo20101.1.exon.11	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20101.1.utr5p.1	Spo20101.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20101.1.CDS.1	Spo20101.1.CDS.1	CDS
Spo20101.1.CDS.2	Spo20101.1.CDS.2	CDS
Spo20101.1.CDS.3	Spo20101.1.CDS.3	CDS
Spo20101.1.CDS.4	Spo20101.1.CDS.4	CDS
Spo20101.1.CDS.5	Spo20101.1.CDS.5	CDS
Spo20101.1.CDS.6	Spo20101.1.CDS.6	CDS
Spo20101.1.CDS.7	Spo20101.1.CDS.7	CDS
Spo20101.1.CDS.8	Spo20101.1.CDS.8	CDS
Spo20101.1.CDS.9	Spo20101.1.CDS.9	CDS
Spo20101.1.CDS.10	Spo20101.1.CDS.10	CDS
Spo20101.1.CDS.11	Spo20101.1.CDS.11	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20101.1.utr3p.1	Spo20101.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo20101.1 vs. NCBI nr
Match: gi|902235858|gb|KNA24111.1| (hypothetical protein SOVF_018830 [Spinacia oleracea])

HSP 1 Score: 1143.6 bits (2957), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE 120
           RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE
Sbjct: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE 120

Query: 121 SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP 180
           SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP
Sbjct: 121 SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP 180

Query: 181 GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG 240
           GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG
Sbjct: 181 GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG 240

Query: 241 NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL 300
           NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL
Sbjct: 241 NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL 300

Query: 301 PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI 360
           PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI
Sbjct: 301 PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI 360

Query: 361 PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ 420
           PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ
Sbjct: 361 PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ 420

Query: 421 AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH 480
           AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH
Sbjct: 421 AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH 480

Query: 481 RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ 540
           RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ
Sbjct: 481 RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ 540

Query: 541 SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP 582
           SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP
Sbjct: 541 SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP 581

[Close]

BLAST of Spo20101.1 vs. NCBI nr
Match: gi|902175383|gb|KNA08578.1| (hypothetical protein SOVF_161370 [Spinacia oleracea])

HSP 1 Score: 508.8 bits (1309), Expect = 1.200e-140
Identity = 288/404 (71.29%), Postives = 306/404 (75.74%), Query Frame = 1


		  
Query: 214 QLNVREVEEDISHASSQTNMSGPPSLGNSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSA 273
           QLNVREVEEDISHASS+TNMSGPP LGN TSVQTSLPELEPS PSQGMGSQQFSHVRD+ 
Sbjct: 50  QLNVREVEEDISHASSETNMSGPPFLGNPTSVQTSLPELEPSGPSQGMGSQQFSHVRDTG 109

Query: 274 SISHQLSHSDLLTLMRNMANSASAQGLPYLPALEQSPWMGPHQLPHNSITASTRERPMPS 333
           SISHQL HSDLL LMRN +NSASAQGLPYLPALEQS WMGP  LPH   T STRERPMPS
Sbjct: 110 SISHQLPHSDLLRLMRNTSNSASAQGLPYLPALEQSRWMGPQHLPHIRSTGSTRERPMPS 169

Query: 334 LQPGGDQVVP------------------FY------------------PGLVMVTSSMSD 393
           LQPGGDQVVP                  FY                  PGLVMVTSSMSD
Sbjct: 170 LQPGGDQVVPFYPGLVMVTSSMSDQVVPFYPGLVMVTSSMSDQVVPFYPGLVMVTSSMSD 229

Query: 394 QVIPFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGS 453
           QV+PFYPTSAGVNAP+FQSQPRYSSTNQYA VSSPWLES+IRNAASCSQSPNPYQLRSGS
Sbjct: 230 QVVPFYPTSAGVNAPLFQSQPRYSSTNQYASVSSPWLESYIRNAASCSQSPNPYQLRSGS 289

Query: 454 GRQAQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYR 513
           GRQ+QQGPP GFNLSSSA QLTTQTITT  R   +GPPPGFNHSLSAPQ+ TE I TIYR
Sbjct: 290 GRQSQQGPPPGFNLSSSALQLTTQTITTIYRQAQRGPPPGFNHSLSAPQLTTEPITTIYR 349

Query: 514 QVHRGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNS- 573
           QV RGPPPGFNHPPSAPQL NAA P  +        +QL  NDMNR+R D L  GV +S 
Sbjct: 350 QVQRGPPPGFNHPPSAPQLPNAA-PASI-------PFQLRRNDMNRDRLDGLRFGVTDSL 409

[Close]

BLAST of Spo20101.1 vs. NCBI nr
Match: gi|902186708|gb|KNA10768.1| (hypothetical protein SOVF_141220 [Spinacia oleracea])

HSP 1 Score: 271.6 bits (693), Expect = 3.300e-69
Identity = 167/259 (64.48%), Postives = 180/259 (69.50%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDE GI TLRQNPDIIGSSSS NE PE+GE S+I +PDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFH------------HQLE 120
           +QIST+LVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQ H            HQLE
Sbjct: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQIHHQLETGSSSQSNHQLE 120

Query: 121 SGSGVSGSYHLESPGTSNSSSSLPISNMDE-----------LQVQTKLHLQVEAEKHLQL 180
           SGSG+SGSYHLESP TSN SSSLP +NMDE           L+VQTKLHLQ EAEKHLQL
Sbjct: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQAEAEKHLQL 180

Query: 181 RQDAERRYMAVMLERVC---QQATQPGDNLIPPAPQ---------LTTDFPSETYSPYLY 225
            QDAERRYMA M+ER C   QQA   G NL P AP             D  S+T S   Y
Sbjct: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240

[Close]

BLAST of Spo20101.1 vs. NCBI nr
Match: gi|902183862|gb|KNA10191.1| (hypothetical protein SOVF_146730 [Spinacia oleracea])

HSP 1 Score: 181.8 bits (460), Expect = 3.400e-42
Identity = 94/111 (84.68%), Postives = 100/111 (90.09%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDN KGKN+VDEYDQEQ+ EDE GIC LRQNPDIIG+SSS NELPE+GE S+I +PDEPL
Sbjct: 1   MDNRKGKNEVDEYDQEQHNEDESGICNLRQNPDIIGNSSSDNELPETGENSMIPQPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGS 112
           RQISTDLVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQFHHQLESGS
Sbjct: 61  RQISTDLVLAVPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 111

[Close]

BLAST of Spo20101.1 vs. NCBI nr
Match: gi|902183243|gb|KNA10085.1| (hypothetical protein SOVF_147700 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 166.8 bits (421), Expect = 1.100e-37
Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYED++ ICTL+QNPDIIGSSSS NELPE+GEKS+IA+P+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDFDICTLKQNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  RQISTDLVLAAPC------CQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSG 113
           RQIS D   A PC       QI+RSQRL+ E SGR+RMRETGSS Q QFHHQLESGSG
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSG 116

[Close]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX98_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018830 PE=4 SV=1)

HSP 1 Score: 1143.6 bits (2957), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE 120
           RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE
Sbjct: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSGVSGSYHLE 120

Query: 121 SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP 180
           SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP
Sbjct: 121 SPGTSNSSSSLPISNMDELQVQTKLHLQVEAEKHLQLRQDAERRYMAVMLERVCQQATQP 180

Query: 181 GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG 240
           GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG
Sbjct: 181 GDNLIPPAPQLTTDFPSETYSPYLYTNNCAWHKQLNVREVEEDISHASSQTNMSGPPSLG 240

Query: 241 NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL 300
           NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL
Sbjct: 241 NSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSASISHQLSHSDLLTLMRNMANSASAQGL 300

Query: 301 PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI 360
           PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI
Sbjct: 301 PYLPALEQSPWMGPHQLPHNSITASTRERPMPSLQPGGDQVVPFYPGLVMVTSSMSDQVI 360

Query: 361 PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ 420
           PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ
Sbjct: 361 PFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGSGRQ 420

Query: 421 AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH 480
           AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH
Sbjct: 421 AQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYRQVH 480

Query: 481 RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ 540
           RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ
Sbjct: 481 RGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNSQNLQ 540

Query: 541 SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP 582
           SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP
Sbjct: 541 SMIAPLKSEVADLRNQIFKLEAELNEAENQESRDPDNAEEP 581

[Close]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPE1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161370 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 8.500e-141
Identity = 288/404 (71.29%), Postives = 306/404 (75.74%), Query Frame = 1


		  
Query: 214 QLNVREVEEDISHASSQTNMSGPPSLGNSTSVQTSLPELEPSEPSQGMGSQQFSHVRDSA 273
           QLNVREVEEDISHASS+TNMSGPP LGN TSVQTSLPELEPS PSQGMGSQQFSHVRD+ 
Sbjct: 50  QLNVREVEEDISHASSETNMSGPPFLGNPTSVQTSLPELEPSGPSQGMGSQQFSHVRDTG 109

Query: 274 SISHQLSHSDLLTLMRNMANSASAQGLPYLPALEQSPWMGPHQLPHNSITASTRERPMPS 333
           SISHQL HSDLL LMRN +NSASAQGLPYLPALEQS WMGP  LPH   T STRERPMPS
Sbjct: 110 SISHQLPHSDLLRLMRNTSNSASAQGLPYLPALEQSRWMGPQHLPHIRSTGSTRERPMPS 169

Query: 334 LQPGGDQVVP------------------FY------------------PGLVMVTSSMSD 393
           LQPGGDQVVP                  FY                  PGLVMVTSSMSD
Sbjct: 170 LQPGGDQVVPFYPGLVMVTSSMSDQVVPFYPGLVMVTSSMSDQVVPFYPGLVMVTSSMSD 229

Query: 394 QVIPFYPTSAGVNAPIFQSQPRYSSTNQYALVSSPWLESHIRNAASCSQSPNPYQLRSGS 453
           QV+PFYPTSAGVNAP+FQSQPRYSSTNQYA VSSPWLES+IRNAASCSQSPNPYQLRSGS
Sbjct: 230 QVVPFYPTSAGVNAPLFQSQPRYSSTNQYASVSSPWLESYIRNAASCSQSPNPYQLRSGS 289

Query: 454 GRQAQQGPPAGFNLSSSAPQLTTQTITTFCRHTLQGPPPGFNHSLSAPQIRTETIRTIYR 513
           GRQ+QQGPP GFNLSSSA QLTTQTITT  R   +GPPPGFNHSLSAPQ+ TE I TIYR
Sbjct: 290 GRQSQQGPPPGFNLSSSALQLTTQTITTIYRQAQRGPPPGFNHSLSAPQLTTEPITTIYR 349

Query: 514 QVHRGPPPGFNHPPSAPQLTNAARPLQLRLHNFLTEWQLIWNDMNRERHDTLGSGVNNS- 573
           QV RGPPPGFNHPPSAPQL NAA P  +        +QL  NDMNR+R D L  GV +S 
Sbjct: 350 QVQRGPPPGFNHPPSAPQLPNAA-PASI-------PFQLRRNDMNRDRLDGLRFGVTDSL 409

[Close]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141220 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.300e-69
Identity = 167/259 (64.48%), Postives = 180/259 (69.50%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDE GI TLRQNPDIIGSSSS NE PE+GE S+I +PDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFH------------HQLE 120
           +QIST+LVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQ H            HQLE
Sbjct: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQIHHQLETGSSSQSNHQLE 120

Query: 121 SGSGVSGSYHLESPGTSNSSSSLPISNMDE-----------LQVQTKLHLQVEAEKHLQL 180
           SGSG+SGSYHLESP TSN SSSLP +NMDE           L+VQTKLHLQ EAEKHLQL
Sbjct: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQAEAEKHLQL 180

Query: 181 RQDAERRYMAVMLERVC---QQATQPGDNLIPPAPQ---------LTTDFPSETYSPYLY 225
            QDAERRYMA M+ER C   QQA   G NL P AP             D  S+T S   Y
Sbjct: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240

[Close]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUM9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146730 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.400e-42
Identity = 94/111 (84.68%), Postives = 100/111 (90.09%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDN KGKN+VDEYDQEQ+ EDE GIC LRQNPDIIG+SSS NELPE+GE S+I +PDEPL
Sbjct: 1   MDNRKGKNEVDEYDQEQHNEDESGICNLRQNPDIIGNSSSDNELPETGENSMIPQPDEPL 60

Query: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGS 112
           RQISTDLVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQFHHQLESGS
Sbjct: 61  RQISTDLVLAVPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 111

[Close]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS59_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_147700 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.000e-38
Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 1


		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60
           MDNGKGKNKVDEYDQEQNYED++ ICTL+QNPDIIGSSSS NELPE+GEKS+IA+P+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDFDICTLKQNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  RQISTDLVLAAPC------CQIQRSQRLSDEGSGRKRMRETGSSGQSQFHHQLESGSG 113
           RQIS D   A PC       QI+RSQRL+ E SGR+RMRETGSS Q QFHHQLESGSG
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSG 116

The following BLAST results are available for this feature:

BLAST of Spo20101.1 vs. NCBI nr
BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
BLAST of Spo20101.1 vs. ExPASy Swiss-Prot
BLAST of Spo20101.1 vs. TAIR (Arabidopsis)

BLAST of Spo20101.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235858\|gb\|KNA24111.1\|	0.0e+0	100.	hypothetical protein SOVF_0188...	[more]
gi\|902175383\|gb\|KNA08578.1\|	1.2e-140	71.2	hypothetical protein SOVF_1613...	[more]
gi\|902186708\|gb\|KNA10768.1\|	3.3e-69	64.4	hypothetical protein SOVF_1412...	[more]
gi\|902183862\|gb\|KNA10191.1\|	3.4e-42	84.6	hypothetical protein SOVF_1467...	[more]
gi\|902183243\|gb\|KNA10085.1\|	1.1e-37	76.2	hypothetical protein SOVF_1477...	[more]

BLAST of Spo20101.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RX98_SPIOL	0.0e+0	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QPE1_SPIOL	8.5e-141	71.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QVN3_SPIOL	2.3e-69	64.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9QUM9_SPIOL	2.4e-42	84.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9QS59_SPIOL	8.0e-38	76.2	Uncharacterized protein (Fragm...	[more]

BLAST of Spo20101.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo20101.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 139..174 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 543..570 scor
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 106..174 score: 2.2
None	No IPR available	PANTHER	PTHR31499:SF9	MYB FAMILY TRANSCRIPTION FACTOR	coord: 106..174 score: 2.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding