Spo20215.1 (mRNA)

Overview
NameSpo20215.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionATP synthase subunit alpha, chloroplastic (3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
Locationchr2 : 17639690 .. 17640094 (+)
Sequence length405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

mRNA sequence

ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

Coding sequence (CDS)

ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

Protein sequence

MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKAT
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo20215Spo20215gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo20215.1Spo20215.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20215.1.exon.1Spo20215.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20215.1.CDS.1Spo20215.1.CDS.1CDS


Homology
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|7636090|emb|CAB88710.1| (ATPase subunit I (chloroplast) [Spinacia oleracea])

HSP 1 Score: 246.5 bits (628), Expect = 2.600e-62
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 198 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 257

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 258 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 317

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 318 EAFAQFASDLDKAT 331
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|126022791|ref|NP_054917.2| (ATP synthase CF1 alpha subunit [Spinacia oleracea])

HSP 1 Score: 246.5 bits (628), Expect = 2.600e-62
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|748993908|gb|AJE74311.1| (ATP synthase CF1 alpha subunit (plastid) [Thelesperma filifolium])

HSP 1 Score: 245.4 bits (625), Expect = 5.800e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|748992830|gb|AJE73247.1| (ATP synthase CF1 alpha subunit (plastid) [Bidens aristosa])

HSP 1 Score: 245.4 bits (625), Expect = 5.800e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|352950895|ref|YP_004891199.1| (ATP synthase CF1 alpha chain (chloroplast) [Larix decidua])

HSP 1 Score: 245.0 bits (624), Expect = 7.600e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: A0A0K0LY69_9ASTR (ATP synthase subunit alpha OS=Bidens aristosa GN=atpA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: A0A0K0M1V3_9ASTR (ATP synthase subunit alpha OS=Thelesperma filifolium GN=atpA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: C3W1R3_LAROX (ATP synthase subunit alpha, chloroplastic OS=Larix occidentalis GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: L7NQ03_9ASTR (ATP synthase subunit alpha, chloroplastic OS=Chrysanthemum indicum GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: E1CH22_LARDC (ATP synthase subunit alpha, chloroplastic OS=Larix decidua GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_SPIOL (ATP synthase subunit alpha, chloroplastic OS=Spinacia oleracea GN=atpA PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.600e-64
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_EUCGG (ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_LACSA (ATP synthase subunit alpha, chloroplastic OS=Lactuca sativa GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_HELAN (ATP synthase subunit alpha, chloroplastic OS=Helianthus annuus GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_CHAVU (ATP synthase subunit alpha, chloroplastic OS=Chara vulgaris GN=atpA PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.400e-63
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSS LGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 277 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPT 336

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 337 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 396

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 397 EAFAQFASDLDKAT 410
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 239.2 bits (609), Expect = 1.500e-63
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSS LGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAF+QF+SDLDKAT
Sbjct: 394 EAFSQFSSDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 200.7 bits (509), Expect = 5.800e-52
Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G GS+ ALP++ETQAGDVSAYIPT
Sbjct: 554 MSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPT 613

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMK+V G  KLELAQ+ E+
Sbjct: 614 NVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREV 673

Query: 121 EAFAQFASDLDKAT 135
            AFAQF SDLD AT
Sbjct: 674 AAFAQFGSDLDAAT 687
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 200.7 bits (509), Expect = 5.800e-52
Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G GS+ ALP++ETQAGDVSAYIPT
Sbjct: 284 MSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPT 343

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMK+V G  KLELAQ+ E+
Sbjct: 344 NVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREV 403

Query: 121 EAFAQFASDLDKAT 135
            AFAQF SDLD AT
Sbjct: 404 AAFAQFGSDLDAAT 417
The following BLAST results are available for this feature:
BLAST of Spo20215.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|7636090|emb|CAB88710.1|2.6e-6298.5ATPase subunit I (chloroplast)... [more]
gi|126022791|ref|NP_054917.2|2.6e-6298.5ATP synthase CF1 alpha subunit... [more]
gi|748993908|gb|AJE74311.1|5.8e-6297.7ATP synthase CF1 alpha subunit... [more]
gi|748992830|gb|AJE73247.1|5.8e-6297.7ATP synthase CF1 alpha subunit... [more]
gi|352950895|ref|YP_004891199.1|7.6e-6297.7ATP synthase CF1 alpha chain (... [more]
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BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K0LY69_9ASTR4.1e-6297.7ATP synthase subunit alpha OS=... [more]
A0A0K0M1V3_9ASTR4.1e-6297.7ATP synthase subunit alpha OS=... [more]
C3W1R3_LAROX5.3e-6297.7ATP synthase subunit alpha, ch... [more]
L7NQ03_9ASTR5.3e-6297.7ATP synthase subunit alpha, ch... [more]
E1CH22_LARDC5.3e-6297.7ATP synthase subunit alpha, ch... [more]
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BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATPA_SPIOL1.6e-6498.5ATP synthase subunit alpha, ch... [more]
ATPA_EUCGG1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_LACSA1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_HELAN1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_CHAVU2.4e-6397.0ATP synthase subunit alpha, ch... [more]
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BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
ATCG00120.11.5e-6394.7ATP synthase subunit alpha[more]
AT2G07698.15.8e-5278.3ATPase, F1 complex, alpha subu... [more]
ATMG01190.15.8e-5278.3ATP synthase subunit 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 1..92
score: 7.1
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 99..134
score: 5.6
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalunknownSSF47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 100..134
score: 6.8
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 83..92
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..99
score: 6.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..98
score: 1.06
NoneNo IPR availableGENE3D1.20.150.20coord: 100..134
score: 3.1
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..134
score: 1.3E
NoneNo IPR availablePANTHERPTHR15184:SF42ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 1..134
score: 1.3E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism